Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0799770 | QDX01716.1 | 99.692 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 0.0 | 682 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0799770 | sp|Q9SL41|NAC37_ARATH | 68.730 | 307 | 75 | 8 | 1 | 291 | 1 | 302 | 6.47e-144 | 413 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0799770 | A0A6B7JGE3 | 99.692 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 0.0 | 682 |
Gene ID | Type | Classification |
---|---|---|
Msa0799770 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0799770 | MtrunA17_Chr5g0405211 | 98.462 | 325 | 5 | 0 | 1 | 325 | 1 | 325 | 0.0 | 677 |
Msa0799770 | MtrunA17_Chr8g0372121 | 63.497 | 326 | 67 | 8 | 4 | 322 | 2 | 282 | 5.84e-138 | 393 |
Msa0799770 | MtrunA17_Chr4g0018391 | 57.595 | 316 | 94 | 8 | 6 | 294 | 5 | 307 | 4.53e-115 | 337 |
Msa0799770 | MtrunA17_Chr4g0056541 | 56.774 | 310 | 101 | 5 | 6 | 294 | 5 | 302 | 1.69e-112 | 330 |
Msa0799770 | MtrunA17_Chr5g0398971 | 54.785 | 303 | 114 | 9 | 6 | 294 | 5 | 298 | 3.47e-106 | 314 |
Msa0799770 | MtrunA17_Chr1g0200561 | 49.249 | 333 | 133 | 8 | 4 | 320 | 15 | 327 | 1.32e-101 | 302 |
Msa0799770 | MtrunA17_Chr2g0309331 | 49.669 | 302 | 126 | 6 | 3 | 290 | 5 | 294 | 1.40e-91 | 276 |
Msa0799770 | MtrunA17_Chr8g0346001 | 44.023 | 343 | 131 | 7 | 5 | 297 | 12 | 343 | 1.33e-85 | 264 |
Msa0799770 | MtrunA17_Chr4g0017921 | 73.418 | 158 | 41 | 1 | 1 | 158 | 1 | 157 | 7.97e-85 | 259 |
Msa0799770 | MtrunA17_Chr3g0091921 | 55.422 | 166 | 67 | 3 | 8 | 169 | 16 | 178 | 1.86e-60 | 195 |
Msa0799770 | MtrunA17_Chr2g0309891 | 56.209 | 153 | 63 | 2 | 8 | 157 | 6 | 157 | 1.47e-59 | 194 |
Msa0799770 | MtrunA17_Chr4g0060931 | 52.047 | 171 | 75 | 3 | 8 | 174 | 17 | 184 | 3.96e-59 | 194 |
Msa0799770 | MtrunA17_Chr6g0484441 | 54.545 | 154 | 67 | 1 | 4 | 157 | 1 | 151 | 4.68e-59 | 192 |
Msa0799770 | MtrunA17_Chr6g0481091 | 55.263 | 152 | 65 | 2 | 8 | 157 | 6 | 156 | 2.74e-58 | 188 |
Msa0799770 | MtrunA17_Chr3g0139331 | 40.000 | 245 | 129 | 5 | 5 | 235 | 8 | 248 | 1.65e-57 | 189 |
Msa0799770 | MtrunA17_Chr1g0183741 | 50.000 | 176 | 81 | 4 | 1 | 174 | 3 | 173 | 8.41e-57 | 185 |
Msa0799770 | MtrunA17_Chr3g0109821 | 53.205 | 156 | 69 | 2 | 8 | 160 | 6 | 160 | 1.60e-56 | 194 |
Msa0799770 | MtrunA17_Chr5g0433781 | 52.903 | 155 | 70 | 2 | 8 | 160 | 6 | 159 | 3.89e-56 | 192 |
Msa0799770 | MtrunA17_Chr7g0253011 | 54.375 | 160 | 62 | 4 | 8 | 159 | 17 | 173 | 7.12e-56 | 186 |
Msa0799770 | MtrunA17_Chr7g0261411 | 53.503 | 157 | 66 | 4 | 1 | 155 | 3 | 154 | 1.57e-55 | 182 |
Msa0799770 | MtrunA17_Chr1g0147421 | 44.949 | 198 | 94 | 5 | 5 | 192 | 24 | 216 | 2.77e-55 | 184 |
Msa0799770 | MtrunA17_Chr2g0316971 | 52.830 | 159 | 66 | 3 | 8 | 160 | 23 | 178 | 3.07e-55 | 184 |
Msa0799770 | MtrunA17_Chr6g0453451 | 51.875 | 160 | 70 | 2 | 8 | 163 | 20 | 176 | 6.52e-55 | 182 |
Msa0799770 | MtrunA17_Chr4g0042561 | 50.909 | 165 | 71 | 3 | 1 | 158 | 1 | 162 | 7.52e-55 | 180 |
Msa0799770 | MtrunA17_Chr8g0361731 | 36.458 | 288 | 152 | 11 | 2 | 266 | 8 | 287 | 1.39e-54 | 183 |
Msa0799770 | MtrunA17_Chr5g0417791 | 50.318 | 157 | 69 | 2 | 8 | 158 | 3 | 156 | 1.90e-54 | 179 |
Msa0799770 | MtrunA17_Chr2g0312321 | 52.532 | 158 | 65 | 4 | 4 | 157 | 7 | 158 | 1.94e-54 | 180 |
Msa0799770 | MtrunA17_Chr7g0252971 | 46.196 | 184 | 79 | 4 | 1 | 168 | 1 | 180 | 2.82e-54 | 181 |
Msa0799770 | MtrunA17_Chr3g0130731 | 49.133 | 173 | 71 | 4 | 8 | 175 | 7 | 167 | 6.95e-54 | 178 |
Msa0799770 | MtrunA17_Chr4g0054791 | 46.561 | 189 | 91 | 4 | 8 | 187 | 6 | 193 | 1.08e-53 | 178 |
Msa0799770 | MtrunA17_Chr5g0417001 | 45.699 | 186 | 84 | 5 | 2 | 175 | 8 | 188 | 1.33e-53 | 180 |
Msa0799770 | MtrunA17_Chr6g0453131 | 46.857 | 175 | 78 | 4 | 10 | 172 | 17 | 188 | 2.08e-53 | 180 |
Msa0799770 | MtrunA17_Chr7g0214071 | 50.299 | 167 | 75 | 3 | 5 | 169 | 12 | 172 | 2.54e-53 | 176 |
Msa0799770 | MtrunA17_Chr2g0318081 | 44.670 | 197 | 101 | 3 | 8 | 202 | 16 | 206 | 3.02e-53 | 178 |
Msa0799770 | MtrunA17_Chr7g0217721 | 48.387 | 186 | 76 | 3 | 1 | 169 | 12 | 194 | 3.94e-52 | 175 |
Msa0799770 | MtrunA17_Chr2g0318101 | 47.399 | 173 | 73 | 4 | 3 | 160 | 10 | 179 | 4.91e-52 | 175 |
Msa0799770 | MtrunA17_Chr6g0461661 | 49.398 | 166 | 75 | 4 | 8 | 167 | 18 | 180 | 1.23e-51 | 175 |
Msa0799770 | MtrunA17_Chr5g0400461 | 50.943 | 159 | 65 | 4 | 8 | 157 | 6 | 160 | 3.83e-51 | 172 |
Msa0799770 | MtrunA17_Chr1g0197351 | 44.175 | 206 | 100 | 6 | 6 | 197 | 40 | 244 | 3.94e-51 | 176 |
Msa0799770 | MtrunA17_Chr4g0047841 | 42.487 | 193 | 81 | 4 | 8 | 173 | 15 | 204 | 6.76e-51 | 172 |
Msa0799770 | MtrunA17_Chr8g0384721 | 51.592 | 157 | 66 | 3 | 8 | 158 | 7 | 159 | 7.21e-51 | 170 |
Msa0799770 | MtrunA17_Chr3g0144271 | 45.238 | 210 | 95 | 6 | 5 | 211 | 20 | 212 | 1.13e-50 | 173 |
Msa0799770 | MtrunA17_Chr3g0124761 | 49.405 | 168 | 75 | 4 | 8 | 169 | 7 | 170 | 1.71e-50 | 169 |
Msa0799770 | MtrunA17_Chr7g0263931 | 49.068 | 161 | 71 | 3 | 5 | 157 | 8 | 165 | 1.03e-49 | 168 |
Msa0799770 | MtrunA17_Chr7g0217711 | 55.797 | 138 | 58 | 1 | 1 | 138 | 12 | 146 | 5.44e-49 | 162 |
Msa0799770 | MtrunA17_Chr8g0359921 | 46.875 | 160 | 78 | 2 | 8 | 163 | 14 | 170 | 7.40e-49 | 166 |
Msa0799770 | MtrunA17_Chr3g0130101 | 49.669 | 151 | 71 | 3 | 10 | 157 | 9 | 157 | 7.45e-49 | 167 |
Msa0799770 | MtrunA17_Chr5g0428991 | 52.288 | 153 | 70 | 2 | 8 | 158 | 25 | 176 | 1.27e-48 | 172 |
Msa0799770 | MtrunA17_Chr3g0128111 | 51.678 | 149 | 69 | 2 | 11 | 157 | 45 | 192 | 1.30e-48 | 163 |
Msa0799770 | MtrunA17_Chr2g0326361 | 48.734 | 158 | 70 | 3 | 8 | 157 | 14 | 168 | 8.26e-47 | 160 |
Msa0799770 | MtrunA17_Chr3g0128151 | 50.658 | 152 | 72 | 2 | 8 | 157 | 22 | 172 | 1.24e-46 | 166 |
Msa0799770 | MtrunA17_Chr2g0311651 | 41.500 | 200 | 97 | 4 | 8 | 189 | 21 | 218 | 1.74e-46 | 159 |
Msa0799770 | MtrunA17_Chr1g0201021 | 52.672 | 131 | 61 | 1 | 10 | 140 | 21 | 150 | 2.39e-46 | 165 |
Msa0799770 | MtrunA17_Chr5g0442771 | 43.114 | 167 | 78 | 3 | 5 | 157 | 15 | 178 | 1.18e-44 | 155 |
Msa0799770 | MtrunA17_Chr3g0092671 | 45.860 | 157 | 82 | 3 | 10 | 164 | 7 | 162 | 4.16e-44 | 158 |
Msa0799770 | MtrunA17_Chr2g0311661 | 39.320 | 206 | 105 | 4 | 8 | 195 | 20 | 223 | 4.24e-44 | 152 |
Msa0799770 | MtrunA17_Chr4g0038751 | 44.311 | 167 | 80 | 4 | 1 | 160 | 4 | 164 | 5.89e-44 | 152 |
Msa0799770 | MtrunA17_Chr4g0076731 | 46.053 | 152 | 78 | 2 | 7 | 157 | 53 | 201 | 6.45e-44 | 156 |
Msa0799770 | MtrunA17_Chr8g0364791 | 46.753 | 154 | 73 | 3 | 10 | 158 | 8 | 157 | 9.95e-44 | 155 |
Msa0799770 | MtrunA17_Chr1g0197361 | 45.223 | 157 | 83 | 3 | 10 | 164 | 10 | 165 | 5.21e-43 | 156 |
Msa0799770 | MtrunA17_Chr8g0384201 | 46.104 | 154 | 74 | 3 | 10 | 158 | 8 | 157 | 1.55e-42 | 153 |
Msa0799770 | MtrunA17_Chr8g0385991 | 43.860 | 171 | 81 | 5 | 8 | 168 | 14 | 179 | 1.65e-40 | 141 |
Msa0799770 | MtrunA17_Chr3g0131911 | 45.181 | 166 | 74 | 4 | 8 | 161 | 14 | 174 | 5.69e-39 | 138 |
Msa0799770 | MtrunA17_Chr2g0321631 | 45.912 | 159 | 71 | 7 | 9 | 155 | 5 | 160 | 7.86e-36 | 130 |
Msa0799770 | MtrunA17_Chr4g0026141 | 42.945 | 163 | 79 | 5 | 4 | 155 | 1 | 160 | 8.40e-36 | 130 |
Msa0799770 | MtrunA17_Chr8g0345671 | 44.295 | 149 | 75 | 5 | 8 | 153 | 11 | 154 | 7.74e-34 | 128 |
Msa0799770 | MtrunA17_Chr3g0113001 | 42.675 | 157 | 77 | 5 | 52 | 201 | 4 | 154 | 1.99e-33 | 125 |
Msa0799770 | MtrunA17_Chr4g0050701 | 35.556 | 180 | 95 | 4 | 8 | 177 | 11 | 179 | 1.24e-31 | 117 |
Msa0799770 | MtrunA17_Chr8g0345691 | 44.295 | 149 | 75 | 5 | 8 | 153 | 12 | 155 | 1.28e-31 | 122 |
Msa0799770 | MtrunA17_Chr2g0321741 | 37.349 | 166 | 81 | 5 | 28 | 193 | 12 | 154 | 8.74e-31 | 119 |
Msa0799770 | MtrunA17_Chr8g0345711 | 36.905 | 168 | 88 | 6 | 4 | 155 | 8 | 173 | 4.30e-30 | 112 |
Msa0799770 | MtrunA17_Chr7g0266701 | 36.646 | 161 | 91 | 4 | 8 | 157 | 4 | 164 | 4.21e-29 | 112 |
Msa0799770 | MtrunA17_Chr3g0113031 | 43.382 | 136 | 61 | 4 | 74 | 201 | 3 | 130 | 1.11e-28 | 111 |
Msa0799770 | MtrunA17_Chr8g0345731 | 41.353 | 133 | 72 | 4 | 8 | 135 | 24 | 155 | 1.06e-25 | 101 |
Msa0799770 | MtrunA17_Chr7g0243371 | 48.780 | 82 | 40 | 1 | 64 | 143 | 17 | 98 | 9.49e-23 | 91.7 |
Msa0799770 | MtrunA17_Chr8g0345721 | 34.731 | 167 | 72 | 6 | 4 | 134 | 26 | 191 | 2.33e-22 | 93.2 |
Msa0799770 | MtrunA17_Chr8g0345701 | 36.735 | 147 | 72 | 6 | 6 | 135 | 5 | 147 | 3.73e-22 | 91.7 |
Msa0799770 | MtrunA17_Chr8g0345741 | 41.667 | 120 | 65 | 4 | 19 | 135 | 2 | 119 | 2.05e-21 | 89.0 |
Msa0799770 | MtrunA17_Chr8g0384351 | 35.802 | 162 | 79 | 7 | 8 | 167 | 10 | 148 | 9.33e-21 | 88.2 |
Msa0799770 | MtrunA17_Chr7g0251661 | 31.298 | 131 | 85 | 4 | 5 | 134 | 7 | 133 | 1.14e-13 | 67.8 |
Msa0799770 | MtrunA17_Chr3g0130321 | 28.049 | 164 | 93 | 6 | 8 | 156 | 7 | 160 | 1.14e-13 | 68.9 |
Msa0799770 | MtrunA17_Chr7g0251651 | 30.469 | 128 | 84 | 4 | 8 | 134 | 18 | 141 | 4.46e-13 | 67.0 |
Msa0799770 | MtrunA17_Chr7g0251671 | 28.058 | 139 | 95 | 4 | 1 | 138 | 3 | 137 | 5.03e-12 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0799770 | AT2G18060.3 | 68.730 | 307 | 75 | 8 | 1 | 291 | 1 | 302 | 6.58e-145 | 413 |
Msa0799770 | AT2G18060.1 | 68.730 | 307 | 75 | 8 | 1 | 291 | 1 | 302 | 6.58e-145 | 413 |
Msa0799770 | AT4G36160.2 | 64.848 | 330 | 86 | 12 | 1 | 310 | 5 | 324 | 2.63e-142 | 407 |
Msa0799770 | AT4G36160.1 | 64.848 | 330 | 86 | 12 | 1 | 310 | 1 | 320 | 2.98e-142 | 407 |
Msa0799770 | AT4G36160.3 | 64.848 | 330 | 86 | 12 | 1 | 310 | 1 | 320 | 2.98e-142 | 407 |
Msa0799770 | AT5G66300.1 | 59.603 | 302 | 82 | 9 | 6 | 291 | 9 | 286 | 1.74e-118 | 343 |
Msa0799770 | AT1G12260.1 | 51.462 | 342 | 109 | 8 | 6 | 294 | 5 | 342 | 1.64e-107 | 319 |
Msa0799770 | AT1G62700.1 | 49.575 | 353 | 126 | 7 | 6 | 315 | 5 | 348 | 1.09e-106 | 317 |
Msa0799770 | AT1G62700.2 | 49.575 | 353 | 126 | 7 | 6 | 315 | 5 | 348 | 1.09e-106 | 317 |
Msa0799770 | AT1G12260.2 | 54.452 | 292 | 123 | 4 | 6 | 294 | 5 | 289 | 1.06e-103 | 308 |
Msa0799770 | AT1G71930.2 | 51.186 | 295 | 120 | 5 | 4 | 293 | 5 | 280 | 5.04e-98 | 293 |
Msa0799770 | AT1G71930.1 | 51.186 | 295 | 120 | 5 | 4 | 293 | 5 | 280 | 5.04e-98 | 293 |
Msa0799770 | AT5G62380.2 | 50.831 | 301 | 129 | 6 | 1 | 291 | 1 | 292 | 3.61e-96 | 289 |
Msa0799770 | AT5G62380.1 | 50.831 | 301 | 129 | 6 | 1 | 291 | 1 | 292 | 3.61e-96 | 289 |
Msa0799770 | AT2G46770.1 | 50.489 | 307 | 102 | 9 | 5 | 291 | 13 | 289 | 3.59e-91 | 276 |
Msa0799770 | AT1G32770.1 | 47.231 | 307 | 125 | 8 | 5 | 292 | 13 | 301 | 1.10e-84 | 260 |
Msa0799770 | AT3G61910.1 | 48.243 | 313 | 92 | 9 | 5 | 292 | 8 | 275 | 6.58e-83 | 254 |
Msa0799770 | AT4G10350.1 | 71.519 | 158 | 43 | 1 | 3 | 158 | 4 | 161 | 2.54e-82 | 253 |
Msa0799770 | AT1G33280.1 | 70.253 | 158 | 46 | 1 | 1 | 158 | 1 | 157 | 1.54e-81 | 250 |
Msa0799770 | AT1G79580.3 | 48.026 | 304 | 121 | 9 | 8 | 289 | 17 | 305 | 1.66e-80 | 249 |
Msa0799770 | AT1G79580.5 | 48.026 | 304 | 121 | 9 | 8 | 289 | 17 | 305 | 1.66e-80 | 249 |
Msa0799770 | AT1G79580.4 | 48.026 | 304 | 121 | 9 | 8 | 289 | 17 | 305 | 1.66e-80 | 249 |
Msa0799770 | AT1G79580.2 | 48.026 | 304 | 121 | 9 | 8 | 289 | 17 | 305 | 1.66e-80 | 249 |
Msa0799770 | AT1G79580.1 | 48.026 | 304 | 121 | 9 | 8 | 289 | 17 | 305 | 1.66e-80 | 249 |
Msa0799770 | AT2G18060.2 | 58.904 | 219 | 70 | 8 | 88 | 291 | 1 | 214 | 4.23e-76 | 235 |
Msa0799770 | AT3G18400.1 | 56.329 | 158 | 65 | 2 | 4 | 160 | 1 | 155 | 1.64e-62 | 201 |
Msa0799770 | AT3G17730.1 | 54.430 | 158 | 69 | 2 | 8 | 163 | 6 | 162 | 5.81e-60 | 192 |
Msa0799770 | AT5G39610.1 | 52.695 | 167 | 72 | 3 | 8 | 170 | 20 | 183 | 6.04e-59 | 191 |
Msa0799770 | AT2G24430.2 | 52.976 | 168 | 69 | 4 | 5 | 169 | 13 | 173 | 1.24e-58 | 191 |
Msa0799770 | AT2G24430.1 | 52.976 | 168 | 69 | 4 | 5 | 169 | 13 | 173 | 1.24e-58 | 191 |
Msa0799770 | AT5G07680.2 | 52.410 | 166 | 72 | 3 | 8 | 169 | 3 | 165 | 3.92e-58 | 190 |
Msa0799770 | AT5G07680.1 | 52.410 | 166 | 72 | 3 | 8 | 169 | 17 | 179 | 5.95e-58 | 190 |
Msa0799770 | AT5G61430.1 | 55.844 | 154 | 61 | 3 | 8 | 157 | 16 | 166 | 1.47e-57 | 189 |
Msa0799770 | AT1G69490.1 | 51.250 | 160 | 69 | 2 | 5 | 158 | 6 | 162 | 5.08e-57 | 186 |
Msa0799770 | AT5G17260.1 | 54.248 | 153 | 66 | 2 | 8 | 157 | 6 | 157 | 1.16e-56 | 191 |
Msa0799770 | AT1G76420.1 | 55.975 | 159 | 64 | 3 | 2 | 157 | 16 | 171 | 1.66e-56 | 186 |
Msa0799770 | AT3G03200.1 | 54.248 | 153 | 66 | 2 | 8 | 157 | 6 | 157 | 5.17e-56 | 189 |
Msa0799770 | AT1G65910.1 | 54.605 | 152 | 66 | 2 | 8 | 157 | 6 | 156 | 5.74e-56 | 192 |
Msa0799770 | AT3G10490.1 | 44.059 | 202 | 103 | 3 | 3 | 201 | 22 | 216 | 1.12e-55 | 181 |
Msa0799770 | AT3G29035.1 | 51.875 | 160 | 70 | 2 | 8 | 163 | 24 | 180 | 1.51e-55 | 184 |
Msa0799770 | AT1G56010.2 | 41.518 | 224 | 113 | 6 | 4 | 220 | 15 | 227 | 7.70e-55 | 182 |
Msa0799770 | AT3G10490.2 | 41.818 | 220 | 117 | 4 | 3 | 219 | 22 | 233 | 1.43e-54 | 185 |
Msa0799770 | AT1G54330.1 | 56.000 | 150 | 64 | 2 | 8 | 157 | 6 | 153 | 1.83e-54 | 180 |
Msa0799770 | AT5G18270.1 | 50.877 | 171 | 73 | 5 | 8 | 170 | 21 | 188 | 5.40e-54 | 180 |
Msa0799770 | AT3G10480.1 | 44.792 | 192 | 96 | 3 | 6 | 194 | 25 | 209 | 1.20e-53 | 182 |
Msa0799770 | AT5G53950.1 | 51.205 | 166 | 72 | 3 | 8 | 167 | 17 | 179 | 1.80e-53 | 180 |
Msa0799770 | AT3G15170.1 | 51.497 | 167 | 72 | 4 | 5 | 165 | 17 | 180 | 1.96e-53 | 178 |
Msa0799770 | AT5G46590.1 | 53.205 | 156 | 68 | 3 | 6 | 157 | 4 | 158 | 2.28e-53 | 177 |
Msa0799770 | AT5G18270.2 | 50.292 | 171 | 74 | 5 | 8 | 170 | 21 | 188 | 2.31e-53 | 178 |
Msa0799770 | AT3G12977.1 | 49.383 | 162 | 76 | 3 | 4 | 162 | 14 | 172 | 4.30e-53 | 176 |
Msa0799770 | AT4G10350.2 | 73.148 | 108 | 27 | 1 | 53 | 158 | 7 | 114 | 4.35e-53 | 176 |
Msa0799770 | AT5G46590.2 | 58.088 | 136 | 55 | 2 | 6 | 140 | 4 | 138 | 9.95e-53 | 175 |
Msa0799770 | AT3G04060.1 | 49.697 | 165 | 75 | 4 | 8 | 167 | 20 | 181 | 2.63e-52 | 176 |
Msa0799770 | AT3G04070.2 | 48.795 | 166 | 68 | 4 | 6 | 157 | 8 | 170 | 5.91e-52 | 175 |
Msa0799770 | AT4G27410.2 | 49.693 | 163 | 76 | 3 | 8 | 168 | 14 | 172 | 8.94e-52 | 173 |
Msa0799770 | AT3G10480.2 | 44.792 | 192 | 95 | 4 | 6 | 194 | 25 | 208 | 9.84e-52 | 177 |
Msa0799770 | AT4G17980.1 | 51.266 | 158 | 70 | 3 | 6 | 157 | 4 | 160 | 1.22e-51 | 172 |
Msa0799770 | AT5G63790.2 | 48.235 | 170 | 77 | 3 | 8 | 170 | 60 | 225 | 1.41e-51 | 173 |
Msa0799770 | AT5G63790.1 | 50.625 | 160 | 68 | 3 | 8 | 160 | 50 | 205 | 1.71e-51 | 173 |
Msa0799770 | AT4G17980.2 | 51.266 | 158 | 70 | 3 | 6 | 157 | 4 | 160 | 2.37e-51 | 172 |
Msa0799770 | AT2G43000.1 | 49.057 | 159 | 75 | 3 | 10 | 165 | 20 | 175 | 3.28e-51 | 171 |
Msa0799770 | AT4G28530.1 | 41.600 | 250 | 111 | 10 | 1 | 229 | 3 | 238 | 3.28e-51 | 173 |
Msa0799770 | AT3G15500.1 | 50.000 | 156 | 73 | 2 | 7 | 160 | 13 | 165 | 3.86e-51 | 172 |
Msa0799770 | AT2G33480.2 | 49.045 | 157 | 74 | 1 | 8 | 164 | 15 | 165 | 5.00e-51 | 170 |
Msa0799770 | AT5G04410.1 | 46.927 | 179 | 84 | 5 | 6 | 180 | 7 | 178 | 5.43e-51 | 177 |
Msa0799770 | AT1G77450.1 | 51.613 | 155 | 66 | 3 | 9 | 158 | 11 | 161 | 1.09e-50 | 169 |
Msa0799770 | AT5G39820.1 | 41.237 | 194 | 84 | 4 | 1 | 169 | 13 | 201 | 1.14e-50 | 171 |
Msa0799770 | AT5G08790.1 | 50.625 | 160 | 68 | 3 | 8 | 160 | 7 | 162 | 3.12e-50 | 169 |
Msa0799770 | AT2G33480.1 | 49.057 | 159 | 73 | 2 | 8 | 164 | 15 | 167 | 3.34e-50 | 168 |
Msa0799770 | AT3G10500.1 | 50.323 | 155 | 72 | 3 | 6 | 157 | 7 | 159 | 5.31e-50 | 175 |
Msa0799770 | AT1G52890.1 | 49.677 | 155 | 73 | 2 | 8 | 160 | 14 | 165 | 7.32e-50 | 169 |
Msa0799770 | AT3G10480.3 | 39.286 | 224 | 95 | 3 | 6 | 194 | 25 | 242 | 7.76e-50 | 174 |
Msa0799770 | AT1G61110.1 | 47.619 | 168 | 70 | 4 | 8 | 160 | 16 | 180 | 8.45e-50 | 169 |
Msa0799770 | AT1G33060.1 | 53.165 | 158 | 68 | 4 | 3 | 157 | 20 | 174 | 1.91e-49 | 175 |
Msa0799770 | AT1G33060.2 | 53.165 | 158 | 68 | 4 | 3 | 157 | 20 | 174 | 2.19e-49 | 175 |
Msa0799770 | AT4G35580.1 | 48.876 | 178 | 87 | 3 | 3 | 178 | 5 | 180 | 3.88e-49 | 172 |
Msa0799770 | AT1G01720.1 | 49.682 | 157 | 69 | 3 | 8 | 158 | 7 | 159 | 4.24e-49 | 166 |
Msa0799770 | AT4G35580.2 | 48.876 | 178 | 87 | 3 | 3 | 178 | 5 | 180 | 5.50e-49 | 172 |
Msa0799770 | AT4G27410.3 | 46.893 | 177 | 77 | 4 | 8 | 168 | 14 | 189 | 5.88e-49 | 166 |
Msa0799770 | AT4G35580.3 | 48.876 | 178 | 87 | 3 | 3 | 178 | 5 | 180 | 6.12e-49 | 172 |
Msa0799770 | AT3G15510.1 | 49.068 | 161 | 64 | 4 | 12 | 157 | 21 | 178 | 5.70e-48 | 165 |
Msa0799770 | AT3G04070.1 | 53.676 | 136 | 55 | 3 | 6 | 136 | 8 | 140 | 6.13e-48 | 165 |
Msa0799770 | AT1G26870.1 | 45.143 | 175 | 78 | 4 | 2 | 162 | 10 | 180 | 6.43e-48 | 166 |
Msa0799770 | AT5G13180.1 | 51.250 | 160 | 64 | 5 | 8 | 161 | 14 | 165 | 1.88e-47 | 160 |
Msa0799770 | AT5G24590.2 | 53.247 | 154 | 68 | 4 | 8 | 158 | 13 | 165 | 1.98e-47 | 166 |
Msa0799770 | AT3G49530.2 | 50.000 | 158 | 74 | 5 | 3 | 157 | 9 | 164 | 1.89e-46 | 162 |
Msa0799770 | AT3G49530.1 | 50.000 | 158 | 74 | 5 | 3 | 157 | 9 | 164 | 3.92e-46 | 163 |
Msa0799770 | AT1G32510.1 | 45.679 | 162 | 77 | 4 | 6 | 157 | 4 | 164 | 1.47e-45 | 157 |
Msa0799770 | AT2G27300.1 | 42.690 | 171 | 91 | 3 | 1 | 171 | 7 | 170 | 2.64e-45 | 157 |
Msa0799770 | AT2G02450.1 | 45.395 | 152 | 79 | 2 | 7 | 157 | 50 | 198 | 1.69e-44 | 156 |
Msa0799770 | AT2G02450.2 | 45.395 | 152 | 79 | 2 | 7 | 157 | 50 | 198 | 1.84e-44 | 157 |
Msa0799770 | AT5G22290.1 | 42.424 | 165 | 88 | 3 | 3 | 166 | 15 | 173 | 8.24e-43 | 151 |
Msa0799770 | AT1G34180.3 | 45.865 | 133 | 71 | 1 | 10 | 142 | 18 | 149 | 1.00e-42 | 153 |
Msa0799770 | AT1G34190.1 | 44.371 | 151 | 79 | 3 | 10 | 157 | 18 | 166 | 1.10e-42 | 155 |
Msa0799770 | AT1G34180.1 | 45.865 | 133 | 71 | 1 | 10 | 142 | 18 | 149 | 2.31e-42 | 154 |
Msa0799770 | AT5G64060.1 | 44.737 | 152 | 77 | 3 | 10 | 157 | 8 | 156 | 3.17e-42 | 150 |
Msa0799770 | AT5G09330.5 | 46.053 | 152 | 75 | 3 | 10 | 157 | 8 | 156 | 1.19e-41 | 151 |
Msa0799770 | AT5G09330.2 | 46.053 | 152 | 75 | 3 | 10 | 157 | 8 | 156 | 1.19e-41 | 151 |
Msa0799770 | AT5G09330.4 | 46.053 | 152 | 75 | 3 | 10 | 157 | 8 | 156 | 1.19e-41 | 151 |
Msa0799770 | AT5G09330.3 | 46.053 | 152 | 75 | 3 | 10 | 157 | 8 | 156 | 1.19e-41 | 151 |
Msa0799770 | AT5G09330.1 | 46.053 | 152 | 75 | 3 | 10 | 157 | 8 | 156 | 1.19e-41 | 151 |
Msa0799770 | AT3G12910.1 | 44.318 | 176 | 73 | 6 | 10 | 165 | 23 | 193 | 2.04e-41 | 146 |
Msa0799770 | AT1G34180.4 | 43.056 | 144 | 71 | 2 | 10 | 142 | 18 | 161 | 2.42e-41 | 150 |
Msa0799770 | AT1G52880.1 | 45.455 | 165 | 73 | 3 | 12 | 162 | 21 | 182 | 3.59e-41 | 146 |
Msa0799770 | AT2G17040.1 | 42.208 | 154 | 80 | 3 | 10 | 160 | 8 | 155 | 4.27e-41 | 145 |
Msa0799770 | AT1G34180.2 | 43.056 | 144 | 71 | 2 | 10 | 142 | 18 | 161 | 5.81e-41 | 150 |
Msa0799770 | AT5G04395.1 | 44.516 | 155 | 73 | 3 | 3 | 144 | 23 | 177 | 8.34e-41 | 141 |
Msa0799770 | AT1G56010.1 | 43.478 | 161 | 77 | 4 | 66 | 220 | 8 | 160 | 2.41e-39 | 140 |
Msa0799770 | AT3G44290.2 | 44.800 | 125 | 67 | 1 | 10 | 134 | 16 | 138 | 1.14e-38 | 137 |
Msa0799770 | AT3G44290.1 | 44.800 | 125 | 67 | 1 | 10 | 134 | 16 | 138 | 6.31e-38 | 138 |
Msa0799770 | AT5G61430.2 | 61.224 | 98 | 34 | 2 | 64 | 157 | 6 | 103 | 1.25e-37 | 135 |
Msa0799770 | AT1G32870.2 | 43.506 | 154 | 80 | 3 | 8 | 157 | 10 | 160 | 1.26e-36 | 138 |
Msa0799770 | AT1G32870.1 | 43.506 | 154 | 80 | 3 | 8 | 157 | 10 | 160 | 1.48e-36 | 138 |
Msa0799770 | AT1G32870.3 | 43.506 | 154 | 80 | 3 | 8 | 157 | 46 | 196 | 2.35e-36 | 138 |
Msa0799770 | AT3G12977.2 | 52.212 | 113 | 48 | 3 | 53 | 162 | 10 | 119 | 3.12e-36 | 130 |
Msa0799770 | AT2G33480.3 | 49.515 | 103 | 50 | 1 | 64 | 164 | 8 | 110 | 6.47e-31 | 116 |
Msa0799770 | AT5G22380.1 | 43.478 | 138 | 68 | 5 | 4 | 134 | 1 | 135 | 2.12e-27 | 107 |
Msa0799770 | AT4G28530.2 | 43.165 | 139 | 56 | 4 | 1 | 120 | 3 | 137 | 6.51e-27 | 108 |
Msa0799770 | AT3G44350.2 | 37.821 | 156 | 85 | 6 | 11 | 157 | 8 | 160 | 2.81e-26 | 105 |
Msa0799770 | AT1G02230.1 | 42.941 | 170 | 83 | 9 | 9 | 170 | 4 | 167 | 3.63e-26 | 107 |
Msa0799770 | AT4G01520.1 | 37.748 | 151 | 85 | 5 | 9 | 154 | 5 | 151 | 4.66e-26 | 105 |
Msa0799770 | AT3G44350.1 | 38.931 | 131 | 71 | 4 | 11 | 135 | 8 | 135 | 6.95e-26 | 101 |
Msa0799770 | AT4G01540.3 | 37.584 | 149 | 84 | 5 | 11 | 154 | 7 | 151 | 8.94e-25 | 103 |
Msa0799770 | AT4G01540.2 | 37.584 | 149 | 84 | 5 | 11 | 154 | 7 | 151 | 1.19e-24 | 103 |
Msa0799770 | AT4G01540.4 | 37.584 | 149 | 84 | 5 | 11 | 154 | 7 | 151 | 1.20e-24 | 103 |
Msa0799770 | AT4G01540.1 | 37.584 | 149 | 84 | 5 | 11 | 154 | 7 | 151 | 1.23e-24 | 104 |
Msa0799770 | AT5G64530.1 | 32.961 | 179 | 87 | 6 | 8 | 168 | 3 | 166 | 1.69e-24 | 98.6 |
Msa0799770 | AT4G01550.1 | 37.086 | 151 | 87 | 4 | 11 | 157 | 7 | 153 | 1.84e-24 | 103 |
Msa0799770 | AT3G04420.2 | 40.310 | 129 | 72 | 3 | 9 | 134 | 4 | 130 | 3.62e-24 | 100 |
Msa0799770 | AT3G04420.1 | 40.310 | 129 | 72 | 3 | 9 | 134 | 4 | 130 | 1.13e-23 | 100 |
Msa0799770 | AT1G02250.1 | 39.645 | 169 | 89 | 8 | 9 | 170 | 4 | 166 | 1.23e-23 | 100 |
Msa0799770 | AT5G64530.2 | 39.695 | 131 | 62 | 5 | 8 | 136 | 3 | 118 | 1.83e-23 | 95.1 |
Msa0799770 | AT1G01010.1 | 37.662 | 154 | 78 | 7 | 11 | 153 | 6 | 152 | 7.53e-23 | 99.0 |
Msa0799770 | AT2G43000.2 | 45.833 | 96 | 49 | 2 | 73 | 165 | 2 | 97 | 4.57e-22 | 92.4 |
Msa0799770 | AT3G10490.4 | 35.971 | 139 | 79 | 3 | 84 | 219 | 2 | 133 | 7.85e-22 | 95.1 |
Msa0799770 | AT3G10490.3 | 35.971 | 139 | 79 | 3 | 84 | 219 | 2 | 133 | 7.85e-22 | 95.1 |
Msa0799770 | AT1G02220.1 | 39.231 | 130 | 71 | 4 | 8 | 134 | 3 | 127 | 5.99e-20 | 90.1 |
Msa0799770 | AT5G50820.1 | 37.857 | 140 | 62 | 6 | 8 | 138 | 17 | 140 | 2.47e-19 | 84.7 |
Msa0799770 | AT3G56530.1 | 27.815 | 151 | 105 | 2 | 7 | 155 | 51 | 199 | 6.44e-17 | 80.5 |
Msa0799770 | AT5G22290.2 | 41.558 | 77 | 41 | 1 | 90 | 166 | 2 | 74 | 3.02e-15 | 74.7 |
Msa0799770 | AT5G14000.1 | 26.786 | 168 | 115 | 3 | 8 | 173 | 15 | 176 | 7.03e-15 | 72.8 |
Msa0799770 | AT5G14000.2 | 29.771 | 131 | 85 | 2 | 8 | 136 | 15 | 140 | 7.45e-14 | 68.9 |
Msa0799770 | AT3G55210.1 | 25.466 | 161 | 103 | 5 | 8 | 155 | 11 | 167 | 1.77e-12 | 67.4 |
Msa0799770 | AT3G04430.1 | 34.074 | 135 | 72 | 6 | 14 | 135 | 6 | 136 | 1.18e-11 | 63.5 |
Find 89 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGATAAGATGAAACTAAT+TGG | 0.196107 | 5_3:+13104926 | Msa0799770:CDS |
AGGCTTGAATCTGATGAAAA+TGG | 0.260946 | 5_3:+13105025 | Msa0799770:CDS |
AGTTCAGATTGCAGTGATAT+TGG | 0.262862 | 5_3:+13107310 | Msa0799770:three_prime_UTR |
TGTTACTGCAGCAGGGTAAT+AGG | 0.270150 | 5_3:+13107251 | Msa0799770:three_prime_UTR |
GAGCTACCATGGCTGGGTTT+TGG | 0.285122 | 5_3:+13104876 | Msa0799770:CDS |
CAATCAGATTTCTGTCCATT+AGG | 0.301864 | 5_3:-13104986 | None:intergenic |
AATCAGATTTCTGTCCATTA+GGG | 0.308366 | 5_3:-13104985 | None:intergenic |
CTGTTAGTTCTTGTCCCTGT+TGG | 0.308789 | 5_3:-13104854 | None:intergenic |
ATAATAATAGCAACCTGTTT+TGG | 0.310133 | 5_3:-13107031 | None:intergenic |
CTTACACATGTTATAACTTT+GGG | 0.324312 | 5_3:-13106874 | None:intergenic |
GTGCTTGGCCTCTTTACTAA+TGG | 0.340736 | 5_3:-13106966 | None:intergenic |
TAGTACTAGTACAAATAAAA+TGG | 0.342897 | 5_3:-13107374 | None:intergenic |
GCTTACACATGTTATAACTT+TGG | 0.349128 | 5_3:-13106875 | None:intergenic |
TTGAGATGCATGCGTCAAAA+TGG | 0.352210 | 5_3:+13107528 | Msa0799770:three_prime_UTR |
GGAGTGTTGTTGTCAAGTTT+TGG | 0.359148 | 5_3:+13107155 | Msa0799770:CDS |
GTTCAGATTGCAGTGATATT+GGG | 0.368792 | 5_3:+13107311 | Msa0799770:three_prime_UTR |
ACTCCATGATAGAAAATTAC+TGG | 0.373275 | 5_3:-13104403 | None:intergenic |
CTTGAGATTAGTTGATCAAT+TGG | 0.382802 | 5_3:-13106831 | None:intergenic |
ATGATAAGATGAAACTAATT+GGG | 0.389752 | 5_3:+13104927 | Msa0799770:CDS |
ATTGGATCATGCATGAATAT+AGG | 0.391373 | 5_3:+13105005 | Msa0799770:CDS |
GGCATTGATGTTACTGCAGC+AGG | 0.393119 | 5_3:+13107205 | Msa0799770:CDS |
GGCATTGATGTTACTGCAGC+AGG | 0.393119 | 5_3:+13107243 | Msa0799770:exon |
CTCTAGTAATATTTCTCATC+AGG | 0.402272 | 5_3:+13102902 | Msa0799770:five_prime_UTR |
GTTACTGCAGCAGGGTAATA+GGG | 0.411682 | 5_3:+13107252 | Msa0799770:three_prime_UTR |
CTACGAATACAGTTACTGAT+TGG | 0.424836 | 5_3:+13107075 | Msa0799770:CDS |
CATGTGTCCCACCAGGGTTT+CGG | 0.436059 | 5_3:+13104435 | Msa0799770:CDS |
CCAACTGATGAAGAACTTGT+TGG | 0.437262 | 5_3:+13104464 | Msa0799770:CDS |
CTTTGGGATAAATAGCTTTG+AGG | 0.440208 | 5_3:-13106858 | None:intergenic |
GAGAGCTCTTGATAAGTTTG+TGG | 0.441089 | 5_3:+13107097 | Msa0799770:CDS |
ACTAACAGAGCTACCATGGC+TGG | 0.441475 | 5_3:+13104869 | Msa0799770:CDS |
TCTCAATTTGCACTCATTCA+AGG | 0.443582 | 5_3:-13107511 | None:intergenic |
CTTCATTGCCATTAGTAAAG+AGG | 0.446048 | 5_3:+13106958 | Msa0799770:CDS |
ATGACATTAACGACCAAAAC+AGG | 0.448853 | 5_3:+13107018 | Msa0799770:CDS |
CTCTTTACTAATGGCAATGA+AGG | 0.455370 | 5_3:-13106957 | None:intergenic |
GGTTTGTGCAGGAGGAAGGA+TGG | 0.475889 | 5_3:+13106682 | Msa0799770:intron |
ATGGAGTCATGTGTCCCACC+AGG | 0.483355 | 5_3:+13104428 | Msa0799770:CDS |
ATGAAATGGCAGAGAGATGC+AGG | 0.483796 | 5_3:+13104774 | Msa0799770:intron |
AGGTTTGAGTTGAAGAAGAG+AGG | 0.484956 | 5_3:-13102846 | None:intergenic |
GGTTTGAGTTGAAGAAGAGA+GGG | 0.492876 | 5_3:-13102845 | None:intergenic |
CTCAATTTGCACTCATTCAA+GGG | 0.494879 | 5_3:-13107510 | None:intergenic |
CCAACAAGTTCTTCATCAGT+TGG | 0.496930 | 5_3:-13104464 | None:intergenic |
CAACAAGTTCTTCATCAGTT+GGG | 0.501223 | 5_3:-13104463 | None:intergenic |
AGAAGTAGACAAAATGATCA+AGG | 0.501566 | 5_3:-13102873 | None:intergenic |
CTAATGGACAGAAATCTGAT+TGG | 0.503538 | 5_3:+13104987 | Msa0799770:CDS |
ATTGAACCATGGGATCTTCA+AGG | 0.511774 | 5_3:+13104560 | Msa0799770:CDS |
TGGCAGAGAGATGCAGGATC+GGG | 0.511955 | 5_3:+13104780 | Msa0799770:intron |
TCTTTATCGTATTGAACCAT+GGG | 0.515850 | 5_3:+13104550 | Msa0799770:CDS |
CTATGAAGAAGCTGCAAGTA+GGG | 0.522407 | 5_3:+13106788 | Msa0799770:CDS |
TGGTGGGACACATGACTCCA+TGG | 0.525120 | 5_3:-13104426 | None:intergenic |
TACAAAGGAAGAGCCCCTAA+TGG | 0.525869 | 5_3:+13104971 | Msa0799770:CDS |
CATGAAGTTGAAACTGATCA+AGG | 0.526644 | 5_3:+13107134 | Msa0799770:CDS |
TGATGAAAATGGACCTCCAC+AGG | 0.528524 | 5_3:+13105036 | Msa0799770:CDS |
ATCTTTATCGTATTGAACCA+TGG | 0.534260 | 5_3:+13104549 | Msa0799770:CDS |
ATGGCAGAGAGATGCAGGAT+CGG | 0.542557 | 5_3:+13104779 | Msa0799770:intron |
AGCAAATAATAATCCTAGCT+CGG | 0.543162 | 5_3:+13107178 | Msa0799770:CDS |
TATATAATATAAATGTTCCA+TGG | 0.546655 | 5_3:+13107409 | Msa0799770:three_prime_UTR |
AGATGAAACTAATTGGGATG+AGG | 0.547240 | 5_3:+13104933 | Msa0799770:CDS |
GTTTGTGCAGGAGGAAGGAT+GGG | 0.551208 | 5_3:+13106683 | Msa0799770:intron |
ATATGGTTTGTGCAGGAGGA+AGG | 0.551944 | 5_3:+13106678 | Msa0799770:intron |
CGATCTCTCTGATAACATCA+AGG | 0.569395 | 5_3:-13104526 | None:intergenic |
ATCAATGCCATGTCCGAGCT+AGG | 0.574857 | 5_3:-13107191 | None:intergenic |
TAATAATCCTAGCTCGGACA+TGG | 0.575690 | 5_3:+13107184 | Msa0799770:CDS |
GACAAAATGATCAAGGAGCT+AGG | 0.576148 | 5_3:-13102866 | None:intergenic |
TCTATGAAGAAGCTGCAAGT+AGG | 0.576413 | 5_3:+13106787 | Msa0799770:CDS |
AAGCACAATGTCTCTAGTAT+CGG | 0.584153 | 5_3:+13106983 | Msa0799770:CDS |
GATACTAGAGACATTGTGCT+TGG | 0.594750 | 5_3:-13106981 | None:intergenic |
TGCTTTCCAAAACCCAGCCA+TGG | 0.596504 | 5_3:-13104882 | None:intergenic |
CAATTGATCAACTAATCTCA+AGG | 0.597995 | 5_3:+13106832 | Msa0799770:CDS |
AAGAACTAACAGAGCTACCA+TGG | 0.599903 | 5_3:+13104865 | Msa0799770:CDS |
ACATATATAATATATATCCA+TGG | 0.602366 | 5_3:-13107426 | None:intergenic |
GTTGGGTGGAACCGAAACCC+TGG | 0.606391 | 5_3:-13104446 | None:intergenic |
CAAGTTCTTCATCAGTTGGG+TGG | 0.606733 | 5_3:-13104460 | None:intergenic |
GGTTAATTAGTTACCTGTGG+AGG | 0.607391 | 5_3:-13105049 | None:intergenic |
ATCAGATTTCTGTCCATTAG+GGG | 0.607393 | 5_3:-13104984 | None:intergenic |
TGGAGTCATGTGTCCCACCA+GGG | 0.614596 | 5_3:+13104429 | Msa0799770:CDS |
CTAACAGAGCTACCATGGCT+GGG | 0.617618 | 5_3:+13104870 | Msa0799770:CDS |
AAGTAGGGTCAACAATTCCA+TGG | 0.625295 | 5_3:+13106803 | Msa0799770:CDS |
TGTATACCTTGAAGATCCCA+TGG | 0.629021 | 5_3:-13104566 | None:intergenic |
TTGATCAATTGGATCCACCA+TGG | 0.632099 | 5_3:-13106820 | None:intergenic |
TACTGCAGCAGGGTAATAGT+CGG | 0.643960 | 5_3:+13107216 | Msa0799770:CDS |
AATGAAGGACTTTCAAGCTG+AGG | 0.644381 | 5_3:-13106942 | None:intergenic |
GCATTGATGTTACTGCAGCA+GGG | 0.654680 | 5_3:+13107206 | Msa0799770:CDS |
GCATTGATGTTACTGCAGCA+GGG | 0.654680 | 5_3:+13107244 | Msa0799770:exon |
AAGACTCTAGTGTTCTACAA+AGG | 0.655335 | 5_3:+13104956 | Msa0799770:CDS |
AGCAGGGTAATAGTCGGACA+TGG | 0.660036 | 5_3:+13107222 | Msa0799770:CDS |
GGTATGAAGAGCAGAATGAG+TGG | 0.672358 | 5_3:+13104801 | Msa0799770:CDS |
GGGTGGAACCGAAACCCTGG+TGG | 0.689016 | 5_3:-13104443 | None:intergenic |
GGTGGAACCGAAACCCTGGT+GGG | 0.689627 | 5_3:-13104442 | None:intergenic |
TAGGGTCAACAATTCCATGG+TGG | 0.736574 | 5_3:+13106806 | Msa0799770:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATTTATGAAATATAGTA+AGG | + | chr5_3:13103778-13103797 | Msa0799770:intron | 10.0% |
!!! | ATTTTTCCAATTTATTAATA+TGG | + | chr5_3:13104115-13104134 | Msa0799770:intron | 10.0% |
!!! | AAGAATTTATTTTGATTTAA+AGG | - | chr5_3:13105501-13105520 | None:intergenic | 10.0% |
!! | TATAAAAAAATAAAAGCAAT+AGG | + | chr5_3:13106005-13106024 | Msa0799770:intron | 10.0% |
!! | GTTAATTAATTAACTTATCT+AGG | + | chr5_3:13103747-13103766 | Msa0799770:intron | 15.0% |
!!! | TATAAAGTGTTTTAGTAAAA+AGG | - | chr5_3:13104195-13104214 | None:intergenic | 15.0% |
!! | AAATAATTATGTGAATGAAA+TGG | + | chr5_3:13104760-13104779 | Msa0799770:intron | 15.0% |
!! | AGAATGATATATGTATTATA+TGG | - | chr5_3:13105073-13105092 | None:intergenic | 15.0% |
!!! | AAAAATACATGATAATGTTT+AGG | - | chr5_3:13105099-13105118 | None:intergenic | 15.0% |
!! | ATGAGAGATAATAAATTTAA+TGG | + | chr5_3:13105550-13105569 | Msa0799770:intron | 15.0% |
!!! | ATAAAAGTTTAGATCTTTTT+GGG | - | chr5_3:13106230-13106249 | None:intergenic | 15.0% |
!!! | AATAAAAGTTTAGATCTTTT+TGG | - | chr5_3:13106231-13106250 | None:intergenic | 15.0% |
!! | TCTTACTTAATTAAACTATA+TGG | + | chr5_3:13106661-13106680 | Msa0799770:intron | 15.0% |
!! | TATATAATATAAATGTTCCA+TGG | + | chr5_3:13107409-13107428 | Msa0799770:three_prime_UTR | 15.0% |
!! | ACATATATAATATATATCCA+TGG | - | chr5_3:13107429-13107448 | None:intergenic | 15.0% |
!!! | TATTTTTGTAAAAATATGTG+TGG | + | chr5_3:13107468-13107487 | Msa0799770:three_prime_UTR | 15.0% |
!! | ATCTTTCATTTCTATACTAT+AGG | + | chr5_3:13103153-13103172 | Msa0799770:intron | 20.0% |
!! | AATTTACCAAAGTTATAAGA+AGG | + | chr5_3:13103222-13103241 | Msa0799770:intron | 20.0% |
!! | ACAATAAAATACTCATTACT+AGG | - | chr5_3:13103611-13103630 | None:intergenic | 20.0% |
!!! | CAATCAAAAACTACTTTTTA+AGG | - | chr5_3:13103697-13103716 | None:intergenic | 20.0% |
!! | CATTACCATTCATTATTATT+AGG | - | chr5_3:13103804-13103823 | None:intergenic | 20.0% |
!!! | AATAATAATGAATGGTAATG+TGG | + | chr5_3:13103804-13103823 | Msa0799770:intron | 20.0% |
!! | AATTATGATTCATCAACAAA+CGG | - | chr5_3:13103841-13103860 | None:intergenic | 20.0% |
!! | AAAAAAAAAAACAAGAGTCT+TGG | - | chr5_3:13103971-13103990 | None:intergenic | 20.0% |
!!! | TTTTCCCTAACAAAATATTA+GGG | + | chr5_3:13104621-13104640 | Msa0799770:intron | 20.0% |
!!! | AAAACCCTAATATTTTGTTA+GGG | - | chr5_3:13104628-13104647 | None:intergenic | 20.0% |
!! | AATTGCATTTCAACTATATA+TGG | - | chr5_3:13104670-13104689 | None:intergenic | 20.0% |
!!! | TTGGATACTTTTTATCTTTA+TGG | - | chr5_3:13104838-13104857 | None:intergenic | 20.0% |
!! | TATGATAAGATGAAACTAAT+TGG | + | chr5_3:13104926-13104945 | Msa0799770:CDS | 20.0% |
!! | ATGATAAGATGAAACTAATT+GGG | + | chr5_3:13104927-13104946 | Msa0799770:CDS | 20.0% |
!! | ATCTTTATGTAGTTATTACT+GGG | + | chr5_3:13105432-13105451 | Msa0799770:intron | 20.0% |
!! | TATAATCTAAATGTTCAACA+AGG | + | chr5_3:13105744-13105763 | Msa0799770:intron | 20.0% |
!! | AAAATTATGCAAAAGCAAAA+GGG | + | chr5_3:13105963-13105982 | Msa0799770:intron | 20.0% |
!!! | TTCTTTTGTTGATATGTATT+AGG | - | chr5_3:13106090-13106109 | None:intergenic | 20.0% |
!! | TTAATTGTATGTGTTAATGA+CGG | - | chr5_3:13106127-13106146 | None:intergenic | 20.0% |
!! | TCTAATGTCAATAAAATGAT+CGG | - | chr5_3:13106566-13106585 | None:intergenic | 20.0% |
!!! | ATCATTTTATTGACATTAGA+CGG | + | chr5_3:13106566-13106585 | Msa0799770:intron | 20.0% |
!! | TTAATTAAGTAAGAAACTTG+AGG | - | chr5_3:13106655-13106674 | None:intergenic | 20.0% |
!! | TAGTACTAGTACAAATAAAA+TGG | - | chr5_3:13107377-13107396 | None:intergenic | 20.0% |
! | GAAGAACATATATATGTTGA+TGG | - | chr5_3:13102980-13102999 | None:intergenic | 25.0% |
! | AATTACTACAATTCTGTGTT+GGG | - | chr5_3:13103061-13103080 | None:intergenic | 25.0% |
! | AAATTACTACAATTCTGTGT+TGG | - | chr5_3:13103062-13103081 | None:intergenic | 25.0% |
!!! | GTTTGTTTCTTACTTGTTAT+AGG | - | chr5_3:13103085-13103104 | None:intergenic | 25.0% |
! | TAGTTTACAAAAGACTTGTA+TGG | - | chr5_3:13103107-13103126 | None:intergenic | 25.0% |
! | ACATACAGATATGAAAAATG+TGG | - | chr5_3:13103186-13103205 | None:intergenic | 25.0% |
!!! | GTTTTTGCTACTACTTTTAT+GGG | - | chr5_3:13103299-13103318 | None:intergenic | 25.0% |
!!! | TGTTTTTGCTACTACTTTTA+TGG | - | chr5_3:13103300-13103319 | None:intergenic | 25.0% |
! | ATTTATCTCAAAATCCGTTA+AGG | + | chr5_3:13103319-13103338 | Msa0799770:intron | 25.0% |
!! | TTTTATTGGATGAAAAGCAA+AGG | - | chr5_3:13103495-13103514 | None:intergenic | 25.0% |
! | ATTACTAGGTTAATAAGGAT+GGG | - | chr5_3:13103597-13103616 | None:intergenic | 25.0% |
! | TACTCATTACTAGGTTAATA+AGG | - | chr5_3:13103602-13103621 | None:intergenic | 25.0% |
!! | GTTTTATACATGTCATTAAC+TGG | + | chr5_3:13103716-13103735 | Msa0799770:intron | 25.0% |
! | TAAGGCCTAATAATAATGAA+TGG | + | chr5_3:13103796-13103815 | Msa0799770:intron | 25.0% |
! | ATTATGATTCATCAACAAAC+GGG | - | chr5_3:13103840-13103859 | None:intergenic | 25.0% |
! | AAATGATTATGATGAGAGTT+TGG | - | chr5_3:13104007-13104026 | None:intergenic | 25.0% |
! | CACTCACCATATTAATAAAT+TGG | - | chr5_3:13104124-13104143 | None:intergenic | 25.0% |
! | TGTTATCAGAGATAATCATA+AGG | - | chr5_3:13104165-13104184 | None:intergenic | 25.0% |
! | TGTTTGAATTATAACCAAAC+AGG | - | chr5_3:13104314-13104333 | None:intergenic | 25.0% |
!! | CTTTTCCCTAACAAAATATT+AGG | + | chr5_3:13104620-13104639 | Msa0799770:intron | 25.0% |
!! | CAAAACCCTAATATTTTGTT+AGG | - | chr5_3:13104629-13104648 | None:intergenic | 25.0% |
! | AAATGAATACAGATCTATCA+TGG | - | chr5_3:13104718-13104737 | None:intergenic | 25.0% |
!!! | AAAGATAAAAAGTATCCAAC+AGG | + | chr5_3:13104839-13104858 | Msa0799770:CDS | 25.0% |
!!! | AAGATAAAAAGTATCCAACA+GGG | + | chr5_3:13104840-13104859 | Msa0799770:CDS | 25.0% |
! | ACTTATCTATGAAATGTCAA+AGG | + | chr5_3:13105194-13105213 | Msa0799770:intron | 25.0% |
! | GATCTTTATGTAGTTATTAC+TGG | + | chr5_3:13105431-13105450 | Msa0799770:intron | 25.0% |
! | GTTGAACATTTAGATTATAG+TGG | - | chr5_3:13105743-13105762 | None:intergenic | 25.0% |
!!! | GTTTACATTTTGATTGTCAA+AGG | + | chr5_3:13105872-13105891 | Msa0799770:intron | 25.0% |
! | GAAAATTATGCAAAAGCAAA+AGG | + | chr5_3:13105962-13105981 | Msa0799770:intron | 25.0% |
!! | CATAATTTTATACATCGTTC+TGG | + | chr5_3:13106390-13106409 | Msa0799770:intron | 25.0% |
! | AATCTCAACCAATAAAAAGA+TGG | + | chr5_3:13106449-13106468 | Msa0799770:intron | 25.0% |
!!! | CAATAGTACTTTTTGTACTT+TGG | - | chr5_3:13106746-13106765 | None:intergenic | 25.0% |
!!! | AGTACAAAAAGTACTATTGA+AGG | + | chr5_3:13106747-13106766 | Msa0799770:CDS | 25.0% |
!!! | AAAAAGTACTATTGAAGGAT+GGG | + | chr5_3:13106752-13106771 | Msa0799770:CDS | 25.0% |
! | CTTACACATGTTATAACTTT+GGG | - | chr5_3:13106877-13106896 | None:intergenic | 25.0% |
!! | ATAATAATAGCAACCTGTTT+TGG | - | chr5_3:13107034-13107053 | None:intergenic | 25.0% |
AGAAGTAGACAAAATGATCA+AGG | - | chr5_3:13102876-13102895 | None:intergenic | 30.0% | |
CTCTAGTAATATTTCTCATC+AGG | + | chr5_3:13102902-13102921 | Msa0799770:five_prime_UTR | 30.0% | |
! | AAAGAGAGGAAACGTTTTAT+TGG | - | chr5_3:13103509-13103528 | None:intergenic | 30.0% |
GAAAGAGAGAAAAAAGTGAA+GGG | - | chr5_3:13103536-13103555 | None:intergenic | 30.0% | |
TGACGTAATCATAGTAAAAC+GGG | - | chr5_3:13103572-13103591 | None:intergenic | 30.0% | |
GTGACGTAATCATAGTAAAA+CGG | - | chr5_3:13103573-13103592 | None:intergenic | 30.0% | |
CATTACTAGGTTAATAAGGA+TGG | - | chr5_3:13103598-13103617 | None:intergenic | 30.0% | |
! | TAATGAATGGTAATGTGGAA+TGG | + | chr5_3:13103809-13103828 | Msa0799770:intron | 30.0% |
! | AATGAATGGTAATGTGGAAT+GGG | + | chr5_3:13103810-13103829 | Msa0799770:intron | 30.0% |
TTATGATTCATCAACAAACG+GGG | - | chr5_3:13103839-13103858 | None:intergenic | 30.0% | |
ATAAGAAACGGACATGTATA+GGG | - | chr5_3:13103906-13103925 | None:intergenic | 30.0% | |
TATAAGAAACGGACATGTAT+AGG | - | chr5_3:13103907-13103926 | None:intergenic | 30.0% | |
! | AGCAAAGGGTATATAAGAAA+CGG | - | chr5_3:13103918-13103937 | None:intergenic | 30.0% |
!!! | ATGAGAGTTTGGTTTTGATA+AGG | - | chr5_3:13103996-13104015 | None:intergenic | 30.0% |
ATAATCATAAGGTCATTTGG+TGG | - | chr5_3:13104154-13104173 | None:intergenic | 30.0% | |
GAGATAATCATAAGGTCATT+TGG | - | chr5_3:13104157-13104176 | None:intergenic | 30.0% | |
ACTCCATGATAGAAAATTAC+TGG | - | chr5_3:13104406-13104425 | None:intergenic | 30.0% | |
ATCTTTATCGTATTGAACCA+TGG | + | chr5_3:13104549-13104568 | Msa0799770:CDS | 30.0% | |
TCTTTATCGTATTGAACCAT+GGG | + | chr5_3:13104550-13104569 | Msa0799770:CDS | 30.0% | |
! | ATTTTGTTAGGGAAAAGAGT+GGG | - | chr5_3:13104617-13104636 | None:intergenic | 30.0% |
! | TATTTTGTTAGGGAAAAGAG+TGG | - | chr5_3:13104618-13104637 | None:intergenic | 30.0% |
AATCAGATTTCTGTCCATTA+GGG | - | chr5_3:13104988-13105007 | None:intergenic | 30.0% | |
ATTGGATCATGCATGAATAT+AGG | + | chr5_3:13105005-13105024 | Msa0799770:CDS | 30.0% | |
TATGGTTAATTAGTTACCTG+TGG | - | chr5_3:13105055-13105074 | None:intergenic | 30.0% | |
ACTCTATAAGAAACAAGCAA+AGG | - | chr5_3:13105166-13105185 | None:intergenic | 30.0% | |
GACATTTCATAGATAAGTCA+AGG | - | chr5_3:13105192-13105211 | None:intergenic | 30.0% | |
AACCATTTAATTAATCTCCG+CGG | - | chr5_3:13105258-13105277 | None:intergenic | 30.0% | |
CATAATATATGTATGTTCCG+AGG | + | chr5_3:13105323-13105342 | Msa0799770:intron | 30.0% | |
ACATAAAGATCAAACTAGCA+TGG | - | chr5_3:13105422-13105441 | None:intergenic | 30.0% | |
TATGTAGTTATTACTGGGAA+TGG | + | chr5_3:13105437-13105456 | Msa0799770:intron | 30.0% | |
AAAACAGGAGAAAAATACAC+TGG | + | chr5_3:13105593-13105612 | Msa0799770:intron | 30.0% | |
CATTTAGATTATAGTGGTCT+AGG | - | chr5_3:13105737-13105756 | None:intergenic | 30.0% | |
! | CAAAAGTGTGTAAGCATAAA+AGG | - | chr5_3:13105853-13105872 | None:intergenic | 30.0% |
! | TGCATAATTTTCCATCAGTT+TGG | - | chr5_3:13105954-13105973 | None:intergenic | 30.0% |
! | GTTGCTTTATATTGCAAAAG+AGG | - | chr5_3:13106046-13106065 | None:intergenic | 30.0% |
!! | ATGCACTGATTGTATGTTTA+TGG | - | chr5_3:13106537-13106556 | None:intergenic | 30.0% |
! | TTAAACTATATGGTTTGTGC+AGG | + | chr5_3:13106671-13106690 | Msa0799770:intron | 30.0% |
!! | CAAAAAGTACTATTGAAGGA+TGG | + | chr5_3:13106751-13106770 | Msa0799770:CDS | 30.0% |
! | CTTGAGATTAGTTGATCAAT+TGG | - | chr5_3:13106834-13106853 | None:intergenic | 30.0% |
CAATTGATCAACTAATCTCA+AGG | + | chr5_3:13106832-13106851 | Msa0799770:CDS | 30.0% | |
GCTTACACATGTTATAACTT+TGG | - | chr5_3:13106878-13106897 | None:intergenic | 30.0% | |
AGCAAATAATAATCCTAGCT+CGG | + | chr5_3:13107178-13107197 | Msa0799770:CDS | 30.0% | |
TCTGAACTTGCATTCAAAAA+TGG | - | chr5_3:13107298-13107317 | None:intergenic | 30.0% | |
CTGCAAAATTTCCTTAACCT+AGG | + | chr5_3:13102999-13103018 | Msa0799770:intron | 35.0% | |
CTGTGTTGGGTGAATTAATT+GGG | - | chr5_3:13103048-13103067 | None:intergenic | 35.0% | |
TCTGTGTTGGGTGAATTAAT+TGG | - | chr5_3:13103049-13103068 | None:intergenic | 35.0% | |
CAGTCTCTGAACATAGTATT+AGG | + | chr5_3:13103256-13103275 | Msa0799770:intron | 35.0% | |
! | AACTGACTCATTCTCCTTAA+CGG | - | chr5_3:13103336-13103355 | None:intergenic | 35.0% |
GAGATGTGACATGAAAATTC+TGG | + | chr5_3:13103356-13103375 | Msa0799770:intron | 35.0% | |
TTCTTCTCATTGCAGAAACT+GGG | - | chr5_3:13103411-13103430 | None:intergenic | 35.0% | |
AGATGAAGACATTACAGTCT+TGG | - | chr5_3:13103434-13103453 | None:intergenic | 35.0% | |
GAAAGGATGAGAAAAAGTAG+AGG | - | chr5_3:13103473-13103492 | None:intergenic | 35.0% | |
TTGGATGAAAAGCAAAGGAA+AGG | - | chr5_3:13103490-13103509 | None:intergenic | 35.0% | |
GGAAAGAGAGAAAAAAGTGA+AGG | - | chr5_3:13103537-13103556 | None:intergenic | 35.0% | |
ATGCTTAGGTTTCTGACTTA+AGG | - | chr5_3:13103634-13103653 | None:intergenic | 35.0% | |
AAACAAGAGAATGCATGCTT+AGG | - | chr5_3:13103648-13103667 | None:intergenic | 35.0% | |
! | ATGAATGGTAATGTGGAATG+GGG | + | chr5_3:13103811-13103830 | Msa0799770:intron | 35.0% |
TGTTGTCTTGTGTTAGTGAA+TGG | - | chr5_3:13103871-13103890 | None:intergenic | 35.0% | |
AGTTTGATGAAGCAAGCAAA+GGG | - | chr5_3:13103932-13103951 | None:intergenic | 35.0% | |
AAAACAAGAGTCTTGGCATA+GGG | - | chr5_3:13103964-13103983 | None:intergenic | 35.0% | |
AAAAACAAGAGTCTTGGCAT+AGG | - | chr5_3:13103965-13103984 | None:intergenic | 35.0% | |
AAAGTCATCAAAAGTGAGTG+TGG | + | chr5_3:13104342-13104361 | Msa0799770:intron | 35.0% | |
! | GCACCAGTAATTTTCTATCA+TGG | + | chr5_3:13104400-13104419 | Msa0799770:intron | 35.0% |
! | ATTTTCTATCATGGAGTCCA+TGG | + | chr5_3:13104409-13104428 | Msa0799770:exon | 35.0% |
CAACAAGTTCTTCATCAGTT+GGG | - | chr5_3:13104466-13104485 | None:intergenic | 35.0% | |
AGATGAAACTAATTGGGATG+AGG | + | chr5_3:13104933-13104952 | Msa0799770:CDS | 35.0% | |
AAGACTCTAGTGTTCTACAA+AGG | + | chr5_3:13104956-13104975 | Msa0799770:CDS | 35.0% | |
ATCAGATTTCTGTCCATTAG+GGG | - | chr5_3:13104987-13105006 | None:intergenic | 35.0% | |
CAATCAGATTTCTGTCCATT+AGG | - | chr5_3:13104989-13105008 | None:intergenic | 35.0% | |
! | CTAATGGACAGAAATCTGAT+TGG | + | chr5_3:13104987-13105006 | Msa0799770:CDS | 35.0% |
AGGCTTGAATCTGATGAAAA+TGG | + | chr5_3:13105025-13105044 | Msa0799770:CDS | 35.0% | |
AATGTCAAAGGTCACTTGAA+TGG | + | chr5_3:13105206-13105225 | Msa0799770:intron | 35.0% | |
CATATATTATGCATTGTCCG+AGG | - | chr5_3:13105314-13105333 | None:intergenic | 35.0% | |
! | GTCATGAACTTCTCTTTTTG+TGG | - | chr5_3:13105364-13105383 | None:intergenic | 35.0% |
TTTAAAGGCTGAGATTTCAC+TGG | - | chr5_3:13105486-13105505 | None:intergenic | 35.0% | |
GTGTGTAAGCATAAAAGGAA+GGG | - | chr5_3:13105848-13105867 | None:intergenic | 35.0% | |
AGTGTGTAAGCATAAAAGGA+AGG | - | chr5_3:13105849-13105868 | None:intergenic | 35.0% | |
GCCTCATAGTTACAGATAAA+CGG | + | chr5_3:13106199-13106218 | Msa0799770:intron | 35.0% | |
CCTCATAGTTACAGATAAAC+GGG | + | chr5_3:13106200-13106219 | Msa0799770:intron | 35.0% | |
! | AGTCGGAAACATAGGTATTT+TGG | + | chr5_3:13106281-13106300 | Msa0799770:intron | 35.0% |
ACCAATAAAAAGATGGTGTG+TGG | + | chr5_3:13106456-13106475 | Msa0799770:intron | 35.0% | |
! | TCCACACACCATCTTTTTAT+TGG | - | chr5_3:13106460-13106479 | None:intergenic | 35.0% |
ACATACAATCAGTGCATTTG+AGG | + | chr5_3:13106540-13106559 | Msa0799770:intron | 35.0% | |
GTAAGAAACTTGAGGAAAGA+TGG | - | chr5_3:13106647-13106666 | None:intergenic | 35.0% | |
!! | CTTTGGGATAAATAGCTTTG+AGG | - | chr5_3:13106861-13106880 | None:intergenic | 35.0% |
CTCTTTACTAATGGCAATGA+AGG | - | chr5_3:13106960-13106979 | None:intergenic | 35.0% | |
CTTCATTGCCATTAGTAAAG+AGG | + | chr5_3:13106958-13106977 | Msa0799770:CDS | 35.0% | |
AAGCACAATGTCTCTAGTAT+CGG | + | chr5_3:13106983-13107002 | Msa0799770:CDS | 35.0% | |
ATGACATTAACGACCAAAAC+AGG | + | chr5_3:13107018-13107037 | Msa0799770:CDS | 35.0% | |
CTACGAATACAGTTACTGAT+TGG | + | chr5_3:13107075-13107094 | Msa0799770:CDS | 35.0% | |
CATGAAGTTGAAACTGATCA+AGG | + | chr5_3:13107134-13107153 | Msa0799770:CDS | 35.0% | |
AGTTCAGATTGCAGTGATAT+TGG | + | chr5_3:13107310-13107329 | Msa0799770:three_prime_UTR | 35.0% | |
GTTCAGATTGCAGTGATATT+GGG | + | chr5_3:13107311-13107330 | Msa0799770:three_prime_UTR | 35.0% | |
CTCAATTTGCACTCATTCAA+GGG | - | chr5_3:13107513-13107532 | None:intergenic | 35.0% | |
TCTCAATTTGCACTCATTCA+AGG | - | chr5_3:13107514-13107533 | None:intergenic | 35.0% | |
!! | GGTTTGAGTTGAAGAAGAGA+GGG | - | chr5_3:13102848-13102867 | None:intergenic | 40.0% |
!! | AGGTTTGAGTTGAAGAAGAG+AGG | - | chr5_3:13102849-13102868 | None:intergenic | 40.0% |
GACAAAATGATCAAGGAGCT+AGG | - | chr5_3:13102869-13102888 | None:intergenic | 40.0% | |
AAACATGCATGCATGAACCT+AGG | - | chr5_3:13103019-13103038 | None:intergenic | 40.0% | |
GTGCAGCCTTCTTATAACTT+TGG | - | chr5_3:13103231-13103250 | None:intergenic | 40.0% | |
GTTCTTCTCATTGCAGAAAC+TGG | - | chr5_3:13103412-13103431 | None:intergenic | 40.0% | |
AAGTGAAGGGACAAAAAGAG+AGG | - | chr5_3:13103523-13103542 | None:intergenic | 40.0% | |
TTGTGTTAGTGAATGGTGGT+GGG | - | chr5_3:13103864-13103883 | None:intergenic | 40.0% | |
TGTCTTGTGTTAGTGAATGG+TGG | - | chr5_3:13103868-13103887 | None:intergenic | 40.0% | |
GAGTTTGATGAAGCAAGCAA+AGG | - | chr5_3:13103933-13103952 | None:intergenic | 40.0% | |
CACATACATCACATCCTGTT+TGG | + | chr5_3:13104297-13104316 | Msa0799770:intron | 40.0% | |
CCAACAAGTTCTTCATCAGT+TGG | - | chr5_3:13104467-13104486 | None:intergenic | 40.0% | |
CCAACTGATGAAGAACTTGT+TGG | + | chr5_3:13104464-13104483 | Msa0799770:CDS | 40.0% | |
CGATCTCTCTGATAACATCA+AGG | - | chr5_3:13104529-13104548 | None:intergenic | 40.0% | |
ATTGAACCATGGGATCTTCA+AGG | + | chr5_3:13104560-13104579 | Msa0799770:CDS | 40.0% | |
TGTATACCTTGAAGATCCCA+TGG | - | chr5_3:13104569-13104588 | None:intergenic | 40.0% | |
AAGAACTAACAGAGCTACCA+TGG | + | chr5_3:13104865-13104884 | Msa0799770:CDS | 40.0% | |
GGTTAATTAGTTACCTGTGG+AGG | - | chr5_3:13105052-13105071 | None:intergenic | 40.0% | |
GATCTTATAATCTCAAGCCG+CGG | + | chr5_3:13105238-13105257 | Msa0799770:intron | 40.0% | |
AGCCGCGGAGATTAATTAAA+TGG | + | chr5_3:13105253-13105272 | Msa0799770:intron | 40.0% | |
TAAAGAGAGAAGTTCGTCCT+CGG | + | chr5_3:13105294-13105313 | Msa0799770:intron | 40.0% | |
! | ACTTCTCTTTTTGTGGTGAC+CGG | - | chr5_3:13105357-13105376 | None:intergenic | 40.0% |
ACAGGAGAAAAATACACTGG+AGG | + | chr5_3:13105596-13105615 | Msa0799770:intron | 40.0% | |
ACTAGCCAGACAGTAATAAC+GGG | - | chr5_3:13105631-13105650 | None:intergenic | 40.0% | |
CACTAGCCAGACAGTAATAA+CGG | - | chr5_3:13105632-13105651 | None:intergenic | 40.0% | |
!! | TTTTCCATCAGTTTGGTGAG+AGG | - | chr5_3:13105947-13105966 | None:intergenic | 40.0% |
CCCGTTTATCTGTAACTATG+AGG | - | chr5_3:13106203-13106222 | None:intergenic | 40.0% | |
AACTTTGCAGTCGGAAACAT+AGG | + | chr5_3:13106273-13106292 | Msa0799770:intron | 40.0% | |
ATTCTCTATGACCGTACGTA+GGG | - | chr5_3:13106513-13106532 | None:intergenic | 40.0% | |
AATTCTCTATGACCGTACGT+AGG | - | chr5_3:13106514-13106533 | None:intergenic | 40.0% | |
! | AACTATATGGTTTGTGCAGG+AGG | + | chr5_3:13106674-13106693 | Msa0799770:intron | 40.0% |
TCTATGAAGAAGCTGCAAGT+AGG | + | chr5_3:13106787-13106806 | Msa0799770:CDS | 40.0% | |
CTATGAAGAAGCTGCAAGTA+GGG | + | chr5_3:13106788-13106807 | Msa0799770:CDS | 40.0% | |
AAGTAGGGTCAACAATTCCA+TGG | + | chr5_3:13106803-13106822 | Msa0799770:CDS | 40.0% | |
TTGATCAATTGGATCCACCA+TGG | - | chr5_3:13106823-13106842 | None:intergenic | 40.0% | |
AATGAAGGACTTTCAAGCTG+AGG | - | chr5_3:13106945-13106964 | None:intergenic | 40.0% | |
GATACTAGAGACATTGTGCT+TGG | - | chr5_3:13106984-13107003 | None:intergenic | 40.0% | |
GAGAGCTCTTGATAAGTTTG+TGG | + | chr5_3:13107097-13107116 | Msa0799770:CDS | 40.0% | |
!!! | GGAGTGTTGTTGTCAAGTTT+TGG | + | chr5_3:13107155-13107174 | Msa0799770:CDS | 40.0% |
TAATAATCCTAGCTCGGACA+TGG | + | chr5_3:13107184-13107203 | Msa0799770:CDS | 40.0% | |
TTGAGATGCATGCGTCAAAA+TGG | + | chr5_3:13107528-13107547 | Msa0799770:three_prime_UTR | 40.0% | |
GCATGCATGAACCTAGGTTA+AGG | - | chr5_3:13103013-13103032 | None:intergenic | 45.0% | |
ACTATGTTCAGAGACTGTGC+AGG | - | chr5_3:13103253-13103272 | None:intergenic | 45.0% | |
CTTGTGTTAGTGAATGGTGG+TGG | - | chr5_3:13103865-13103884 | None:intergenic | 45.0% | |
AAGAGTCTTGGCATAGGGTA+GGG | - | chr5_3:13103959-13103978 | None:intergenic | 45.0% | |
GTCATCAAAAGTGAGTGTGG+TGG | + | chr5_3:13104345-13104364 | Msa0799770:intron | 45.0% | |
ATCAAAAGTGAGTGTGGTGG+TGG | + | chr5_3:13104348-13104367 | Msa0799770:intron | 45.0% | |
TCAAAAGTGAGTGTGGTGGT+GGG | + | chr5_3:13104349-13104368 | Msa0799770:intron | 45.0% | |
!! | AGTGTGGTGGTGGGTATTAA+TGG | + | chr5_3:13104358-13104377 | Msa0799770:intron | 45.0% |
CAAGTTCTTCATCAGTTGGG+TGG | - | chr5_3:13104463-13104482 | None:intergenic | 45.0% | |
ATGAAATGGCAGAGAGATGC+AGG | + | chr5_3:13104774-13104793 | Msa0799770:intron | 45.0% | |
GGTATGAAGAGCAGAATGAG+TGG | + | chr5_3:13104801-13104820 | Msa0799770:CDS | 45.0% | |
! | CTGTTAGTTCTTGTCCCTGT+TGG | - | chr5_3:13104857-13104876 | None:intergenic | 45.0% |
TACAAAGGAAGAGCCCCTAA+TGG | + | chr5_3:13104971-13104990 | Msa0799770:CDS | 45.0% | |
TGATGAAAATGGACCTCCAC+AGG | + | chr5_3:13105036-13105055 | Msa0799770:CDS | 45.0% | |
! | TTCTCTTTTTGTGGTGACCG+GGG | - | chr5_3:13105355-13105374 | None:intergenic | 45.0% |
! | CTTCTCTTTTTGTGGTGACC+GGG | - | chr5_3:13105356-13105375 | None:intergenic | 45.0% |
ATTCCCACACTGCAGAAAAC+AGG | + | chr5_3:13105578-13105597 | Msa0799770:intron | 45.0% | |
! | TCTCCTGTTTTCTGCAGTGT+GGG | - | chr5_3:13105584-13105603 | None:intergenic | 45.0% |
! | TTCTCCTGTTTTCTGCAGTG+TGG | - | chr5_3:13105585-13105604 | None:intergenic | 45.0% |
! | GTTTGGTGAGAGGTAGTAGT+AGG | - | chr5_3:13105937-13105956 | None:intergenic | 45.0% |
ACTACCTCTCACCAAACTGA+TGG | + | chr5_3:13105940-13105959 | Msa0799770:intron | 45.0% | |
AACTCCAGCAACTTTGCAGT+CGG | + | chr5_3:13106264-13106283 | Msa0799770:intron | 45.0% | |
TGACCTAGATTCCCTACGTA+CGG | + | chr5_3:13106499-13106518 | Msa0799770:intron | 45.0% | |
! | ATATGGTTTGTGCAGGAGGA+AGG | + | chr5_3:13106678-13106697 | Msa0799770:intron | 45.0% |
TAGGGTCAACAATTCCATGG+TGG | + | chr5_3:13106806-13106825 | Msa0799770:CDS | 45.0% | |
GTGCTTGGCCTCTTTACTAA+TGG | - | chr5_3:13106969-13106988 | None:intergenic | 45.0% | |
! | GCATTGATGTTACTGCAGCA+GGG | + | chr5_3:13107206-13107225 | Msa0799770:CDS | 45.0% |
TACTGCAGCAGGGTAATAGT+CGG | + | chr5_3:13107216-13107235 | Msa0799770:CDS | 45.0% | |
! | GCATTGATGTTACTGCAGCA+GGG | + | chr5_3:13107206-13107225 | Msa0799770:CDS | 45.0% |
TGTTACTGCAGCAGGGTAAT+AGG | + | chr5_3:13107213-13107232 | Msa0799770:CDS | 45.0% | |
GTTACTGCAGCAGGGTAATA+GGG | + | chr5_3:13107214-13107233 | Msa0799770:CDS | 45.0% | |
! | TAAAACGGGCACGCGTTTTG+TGG | - | chr5_3:13103558-13103577 | None:intergenic | 50.0% |
CAAGAGTCTTGGCATAGGGT+AGG | - | chr5_3:13103960-13103979 | None:intergenic | 50.0% | |
!! | GTGGTGGTGGGTATTAATGG+TGG | + | chr5_3:13104361-13104380 | Msa0799770:intron | 50.0% |
!! | GTGGTGGGTATTAATGGTGG+TGG | + | chr5_3:13104364-13104383 | Msa0799770:intron | 50.0% |
ATGGCAGAGAGATGCAGGAT+CGG | + | chr5_3:13104779-13104798 | Msa0799770:intron | 50.0% | |
ACTAACAGAGCTACCATGGC+TGG | + | chr5_3:13104869-13104888 | Msa0799770:CDS | 50.0% | |
CTAACAGAGCTACCATGGCT+GGG | + | chr5_3:13104870-13104889 | Msa0799770:CDS | 50.0% | |
TGCTTTCCAAAACCCAGCCA+TGG | - | chr5_3:13104885-13104904 | None:intergenic | 50.0% | |
!!! | GCTGGGTTTTGGAAAGCAAC+AGG | + | chr5_3:13104887-13104906 | Msa0799770:CDS | 50.0% |
ATGTTCCGAGGTTCAAACCC+CGG | + | chr5_3:13105335-13105354 | Msa0799770:intron | 50.0% | |
AATGGATCCTCTCCAGTGAC+TGG | + | chr5_3:13105455-13105474 | Msa0799770:intron | 50.0% | |
! | CCAGACAGTAATAACGGGAG+GGG | - | chr5_3:13105626-13105645 | None:intergenic | 50.0% |
! | GCCAGACAGTAATAACGGGA+GGG | - | chr5_3:13105627-13105646 | None:intergenic | 50.0% |
! | AGCCAGACAGTAATAACGGG+AGG | - | chr5_3:13105628-13105647 | None:intergenic | 50.0% |
GTTTCCGACTGCAAAGTTGC+TGG | - | chr5_3:13106271-13106290 | None:intergenic | 50.0% | |
TGACCGTACGTAGGGAATCT+AGG | - | chr5_3:13106505-13106524 | None:intergenic | 50.0% | |
GTTTGTGCAGGAGGAAGGAT+GGG | + | chr5_3:13106683-13106702 | Msa0799770:intron | 50.0% | |
ATCAATGCCATGTCCGAGCT+AGG | - | chr5_3:13107194-13107213 | None:intergenic | 50.0% | |
!! | GGCATTGATGTTACTGCAGC+AGG | + | chr5_3:13107205-13107224 | Msa0799770:CDS | 50.0% |
AGCAGGGTAATAGTCGGACA+TGG | + | chr5_3:13107222-13107241 | Msa0799770:CDS | 50.0% | |
!! | GGCATTGATGTTACTGCAGC+AGG | + | chr5_3:13107205-13107224 | Msa0799770:CDS | 50.0% |
TGGTGGGACACATGACTCCA+TGG | - | chr5_3:13104429-13104448 | None:intergenic | 55.0% | |
ATGGAGTCATGTGTCCCACC+AGG | + | chr5_3:13104428-13104447 | Msa0799770:CDS | 55.0% | |
TGGAGTCATGTGTCCCACCA+GGG | + | chr5_3:13104429-13104448 | Msa0799770:CDS | 55.0% | |
CATGTGTCCCACCAGGGTTT+CGG | + | chr5_3:13104435-13104454 | Msa0799770:CDS | 55.0% | |
TGGCAGAGAGATGCAGGATC+GGG | + | chr5_3:13104780-13104799 | Msa0799770:intron | 55.0% | |
! | GAGCTACCATGGCTGGGTTT+TGG | + | chr5_3:13104876-13104895 | Msa0799770:CDS | 55.0% |
GATCCTCTCCAGTGACTGGA+GGG | + | chr5_3:13105459-13105478 | Msa0799770:intron | 55.0% | |
CCCCTCCCGTTATTACTGTC+TGG | + | chr5_3:13105623-13105642 | Msa0799770:intron | 55.0% | |
GGTTTGTGCAGGAGGAAGGA+TGG | + | chr5_3:13106682-13106701 | Msa0799770:intron | 55.0% | |
GGTGGAACCGAAACCCTGGT+GGG | - | chr5_3:13104445-13104464 | None:intergenic | 60.0% | |
GTTGGGTGGAACCGAAACCC+TGG | - | chr5_3:13104449-13104468 | None:intergenic | 60.0% | |
GGTGACCGGGGTTTGAACCT+CGG | - | chr5_3:13105343-13105362 | None:intergenic | 60.0% | |
GGATCCTCTCCAGTGACTGG+AGG | + | chr5_3:13105458-13105477 | Msa0799770:intron | 60.0% | |
TCACTGGACCCTCCAGTCAC+TGG | - | chr5_3:13105470-13105489 | None:intergenic | 60.0% | |
GGGTGGAACCGAAACCCTGG+TGG | - | chr5_3:13104446-13104465 | None:intergenic | 65.0% | |
GGACCCTCCAGTCACTGGAG+AGG | - | chr5_3:13105465-13105484 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 13102802 | 13107551 | 13102802 | ID=Msa0799770;Name=Msa0799770 |
chr5_3 | mRNA | 13102802 | 13107551 | 13102802 | ID=Msa0799770-mRNA-1;Parent=Msa0799770;Name=Msa0799770-mRNA-1;_AED=0.06;_eAED=0.06;_QI=140|1|1|1|0.66|0.5|4|301|330 |
chr5_3 | exon | 13102802 | 13102923 | 13102802 | ID=Msa0799770-mRNA-1:exon:5417;Parent=Msa0799770-mRNA-1 |
chr5_3 | exon | 13104401 | 13104581 | 13104401 | ID=Msa0799770-mRNA-1:exon:5418;Parent=Msa0799770-mRNA-1 |
chr5_3 | exon | 13104786 | 13105057 | 13104786 | ID=Msa0799770-mRNA-1:exon:5419;Parent=Msa0799770-mRNA-1 |
chr5_3 | exon | 13106693 | 13107551 | 13106693 | ID=Msa0799770-mRNA-1:exon:5420;Parent=Msa0799770-mRNA-1 |
chr5_3 | five_prime_UTR | 13102802 | 13102923 | 13102802 | ID=Msa0799770-mRNA-1:five_prime_utr;Parent=Msa0799770-mRNA-1 |
chr5_3 | five_prime_UTR | 13104401 | 13104418 | 13104401 | ID=Msa0799770-mRNA-1:five_prime_utr;Parent=Msa0799770-mRNA-1 |
chr5_3 | CDS | 13104419 | 13104581 | 13104419 | ID=Msa0799770-mRNA-1:cds;Parent=Msa0799770-mRNA-1 |
chr5_3 | CDS | 13104786 | 13105057 | 13104786 | ID=Msa0799770-mRNA-1:cds;Parent=Msa0799770-mRNA-1 |
chr5_3 | CDS | 13106693 | 13107250 | 13106693 | ID=Msa0799770-mRNA-1:cds;Parent=Msa0799770-mRNA-1 |
chr5_3 | three_prime_UTR | 13107251 | 13107551 | 13107251 | ID=Msa0799770-mRNA-1:three_prime_utr;Parent=Msa0799770-mRNA-1 |
Gene Sequence |
Protein sequence |