AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0800840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0800840 MtrunA17_Chr5g0407261 97.788 904 20 0 30 933 1 904 0.0 1830
Msa0800840 MtrunA17_Chr8g0370241 57.381 901 278 18 59 929 20 844 0.0 949
Msa0800840 MtrunA17_Chr8g0369971 40.166 722 288 23 77 785 25 615 1.65e-141 435
Msa0800840 MtrunA17_Chr6g0477411 87.500 56 1 1 440 495 1 50 1.85e-22 93.2
Msa0800840 MtrunA17_Chr6g0477411 72.917 48 9 1 660 703 42 89 3.09e-13 66.6
Msa0800840 MtrunA17_Chr7g0272841 29.213 267 144 10 535 796 104 330 1.24e-18 91.3
Msa0800840 MtrunA17_Chr1g0205931 26.316 266 151 8 536 796 92 317 6.43e-18 89.0
Msa0800840 MtrunA17_Chr4g0033521 26.934 349 215 17 515 832 426 765 8.09e-17 85.9
Msa0800840 MtrunA17_Chr8g0384301 29.213 267 140 11 550 811 347 569 1.91e-16 84.3
Msa0800840 MtrunA17_Chr5g0402551 26.346 353 193 12 464 795 88 394 3.07e-16 83.2
Msa0800840 MtrunA17_Chr3g0117731 25.352 284 176 10 512 792 58 308 3.57e-16 81.3
Msa0800840 MtrunA17_Chr8g0346071 27.632 304 162 13 506 797 13 270 5.51e-16 81.6
Msa0800840 MtrunA17_Chr0c02g0489761 27.273 308 156 13 513 801 80 338 7.72e-16 81.6
Msa0800840 MtrunA17_Chr4g0059121 26.761 284 145 10 526 792 72 309 1.23e-15 79.7
Msa0800840 MtrunA17_Chr6g0474831 27.826 230 139 9 517 733 34 249 2.00e-15 78.2
Msa0800840 MtrunA17_Chr4g0001331 34.302 172 102 6 642 811 121 283 3.08e-15 79.3
Msa0800840 MtrunA17_Chr5g0419441 25.490 306 161 12 509 797 238 493 3.42e-15 80.5
Msa0800840 MtrunA17_Chr4g0063881 29.703 303 159 14 505 797 6 264 5.85e-15 78.6
Msa0800840 MtrunA17_Chr4g0041201 25.641 273 156 9 526 792 561 792 6.67e-15 79.3
Msa0800840 MtrunA17_Chr8g0386981 25.893 336 181 14 517 838 414 695 8.00e-15 79.3
Msa0800840 MtrunA17_Chr4g0042731 28.621 290 153 11 517 792 149 398 9.68e-15 77.8
Msa0800840 MtrunA17_Chr4g0059751 34.932 146 77 6 646 785 202 335 1.22e-14 77.4
Msa0800840 MtrunA17_Chr3g0090261 24.055 291 169 11 513 792 84 333 2.93e-14 75.5
Msa0800840 MtrunA17_Chr8g0355131 26.727 333 182 12 471 795 26 304 3.14e-14 76.6
Msa0800840 MtrunA17_Chr8g0359691 29.911 224 113 11 516 732 669 855 5.45e-14 76.6
Msa0800840 MtrunA17_Chr8g0338501 31.183 279 128 15 468 734 519 745 6.78e-14 76.3
Msa0800840 MtrunA17_Chr1g0197721 26.201 229 123 7 529 749 74 264 7.00e-14 75.5
Msa0800840 MtrunA17_Chr1g0206551 27.660 235 128 7 514 742 39 237 9.32e-14 73.9
Msa0800840 MtrunA17_Chr7g0245031 33.152 184 98 9 646 813 254 428 1.05e-13 74.7
Msa0800840 MtrunA17_Chr5g0423061 27.477 222 124 7 515 733 316 503 1.89e-13 74.3
Msa0800840 MtrunA17_Chr1g0209361 27.027 222 126 6 514 733 346 533 2.03e-13 74.3
Msa0800840 MtrunA17_Chr1g0150321 32.000 200 123 7 635 832 107 295 2.34e-13 73.2
Msa0800840 MtrunA17_Chr4g0049601 30.460 174 93 7 643 793 460 628 2.54e-13 73.9
Msa0800840 MtrunA17_Chr1g0209391 27.232 224 123 7 514 733 303 490 3.30e-13 73.6
Msa0800840 MtrunA17_Chr8g0376131 27.468 233 127 10 516 742 57 253 3.42e-13 72.8
Msa0800840 MtrunA17_Chr5g0441691 26.299 308 159 13 513 801 70 328 3.82e-13 73.2
Msa0800840 MtrunA17_Chr1g0206391 24.496 347 186 15 516 850 46 328 4.03e-13 72.0
Msa0800840 MtrunA17_Chr5g0428571 27.239 268 150 10 516 774 304 535 4.23e-13 73.2
Msa0800840 MtrunA17_Chr2g0333821 35.758 165 98 7 642 803 115 274 5.56e-13 72.4
Msa0800840 MtrunA17_Chr4g0029241 31.507 146 92 5 642 785 227 366 6.10e-13 72.0
Msa0800840 MtrunA17_Chr5g0428581 27.632 228 121 9 514 734 48 238 7.13e-13 71.6
Msa0800840 MtrunA17_Chr2g0304111 33.742 163 92 6 642 797 125 278 7.92e-13 72.0
Msa0800840 MtrunA17_Chr2g0312571 26.996 263 145 10 516 765 51 279 8.21e-13 72.0
Msa0800840 MtrunA17_Chr2g0314821 27.468 233 126 9 516 742 669 864 1.11e-12 72.4
Msa0800840 MtrunA17_Chr8g0379931 25.581 301 162 12 516 793 715 976 1.62e-12 72.0
Msa0800840 MtrunA17_Chr5g0424501 27.397 292 151 14 517 794 198 442 1.83e-12 70.9
Msa0800840 MtrunA17_Chr2g0280691 28.405 257 139 10 513 762 529 747 2.50e-12 71.2
Msa0800840 MtrunA17_Chr8g0338471 30.961 281 128 16 468 734 486 714 2.75e-12 70.9
Msa0800840 MtrunA17_Chr5g0443531 28.571 224 117 11 516 732 682 869 2.93e-12 70.9
Msa0800840 MtrunA17_Chr3g0129721 28.626 262 137 9 512 766 26 244 3.20e-12 68.6
Msa0800840 MtrunA17_Chr8g0358781 28.146 302 154 13 514 792 348 609 3.36e-12 70.5
Msa0800840 MtrunA17_Chr4g0038501 26.910 301 168 13 512 803 21 278 3.38e-12 70.9
Msa0800840 MtrunA17_Chr2g0315081 25.368 272 147 10 513 774 656 881 3.71e-12 70.5
Msa0800840 MtrunA17_Chr1g0166101 34.104 173 97 7 635 800 120 282 3.93e-12 69.3
Msa0800840 MtrunA17_Chr2g0286501 27.875 287 154 14 530 804 63 308 4.08e-12 70.5
Msa0800840 MtrunA17_Chr2g0299991 25.649 308 155 13 515 796 74 333 4.12e-12 68.9
Msa0800840 MtrunA17_Chr2g0312561 26.033 242 136 9 513 748 45 249 4.33e-12 68.9
Msa0800840 MtrunA17_Chr2g0326531 32.258 155 97 5 642 794 229 377 4.42e-12 69.3
Msa0800840 MtrunA17_Chr2g0314841 27.468 233 126 10 516 742 666 861 5.39e-12 70.1
Msa0800840 MtrunA17_Chr5g0424651 27.397 292 151 14 517 794 327 571 5.49e-12 69.7
Msa0800840 MtrunA17_Chr6g0467631 26.016 246 126 8 494 733 345 540 6.36e-12 69.7
Msa0800840 MtrunA17_Chr5g0424581 27.397 292 151 14 517 794 131 375 7.00e-12 68.6
Msa0800840 MtrunA17_Chr5g0428521 27.315 216 117 8 533 743 23 203 7.89e-12 66.2
Msa0800840 MtrunA17_Chr1g0172951 32.237 152 87 5 641 789 443 581 8.24e-12 69.3
Msa0800840 MtrunA17_Chr3g0132591 34.940 166 91 8 644 801 210 366 8.47e-12 68.6
Msa0800840 MtrunA17_Chr7g0226891 28.936 235 121 12 514 741 53 248 9.31e-12 68.2
Msa0800840 MtrunA17_Chr8g0369211 28.906 256 134 13 514 760 632 848 1.03e-11 69.3
Msa0800840 MtrunA17_Chr6g0450571 29.508 183 95 6 634 797 110 277 1.36e-11 68.6
Msa0800840 MtrunA17_Chr8g0338531 32.051 234 110 12 513 734 453 649 1.40e-11 68.6
Msa0800840 MtrunA17_Chr4g0000431 27.778 216 115 6 633 822 117 317 1.42e-11 68.6
Msa0800840 MtrunA17_Chr4g0038091 26.578 301 169 13 512 803 21 278 1.57e-11 68.9
Msa0800840 MtrunA17_Chr5g0426941 27.313 227 123 10 514 734 343 533 1.59e-11 68.2
Msa0800840 MtrunA17_Chr1g0213501 26.667 240 140 8 517 750 118 327 1.80e-11 67.4
Msa0800840 MtrunA17_Chr8g0358911 26.360 239 133 9 516 748 51 252 2.12e-11 67.0
Msa0800840 MtrunA17_Chr5g0433941 29.555 247 120 12 514 752 373 573 2.21e-11 67.8
Msa0800840 MtrunA17_Chr2g0280711 26.506 249 139 9 516 757 536 747 2.28e-11 68.2
Msa0800840 MtrunA17_Chr4g0023221 24.832 298 167 11 516 792 736 997 2.34e-11 68.2
Msa0800840 MtrunA17_Chr2g0288841 26.280 293 153 12 517 796 11 253 2.58e-11 67.0
Msa0800840 MtrunA17_Chr4g0069301 26.236 263 152 9 562 822 83 305 2.86e-11 67.0
Msa0800840 MtrunA17_Chr7g0260191 30.168 179 108 6 624 795 88 256 3.25e-11 67.4
Msa0800840 MtrunA17_Chr3g0081031 28.017 232 124 10 516 741 358 552 4.01e-11 67.0
Msa0800840 MtrunA17_Chr2g0324471 27.119 236 129 11 517 746 375 573 4.26e-11 67.0
Msa0800840 MtrunA17_Chr7g0269001 25.368 272 147 11 532 797 260 481 4.84e-11 66.2
Msa0800840 MtrunA17_Chr6g0483931 26.244 221 127 7 515 733 373 559 5.87e-11 66.6
Msa0800840 MtrunA17_Chr5g0441011 26.623 308 164 13 505 797 8 268 6.28e-11 65.9
Msa0800840 MtrunA17_Chr2g0314991 27.434 226 122 9 513 732 213 402 6.28e-11 66.6
Msa0800840 MtrunA17_Chr1g0180951 39.815 108 56 5 641 744 198 300 8.41e-11 65.5
Msa0800840 MtrunA17_Chr2g0314911 26.106 226 125 8 513 732 664 853 8.64e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0800840 AT2G17520.1 68.539 445 127 3 497 930 395 837 0.0 640
Msa0800840 AT5G24360.1 45.000 880 397 25 89 928 43 875 0.0 633
Msa0800840 AT5G24360.2 44.937 879 397 25 90 928 50 881 0.0 630
Msa0800840 AT5G24360.3 45.080 874 393 25 95 928 35 861 0.0 629
Msa0800840 AT3G11870.1 42.952 454 207 14 509 929 119 553 1.77e-96 315
Msa0800840 AT3G06030.1 28.788 264 144 8 537 796 106 329 2.10e-21 100
Msa0800840 AT1G54960.1 25.405 370 194 15 517 870 74 377 7.45e-19 92.4
Msa0800840 AT1G54960.2 25.405 370 194 15 517 870 74 377 7.45e-19 92.4
Msa0800840 AT1G09000.2 27.365 296 159 11 517 796 75 330 1.98e-18 90.9
Msa0800840 AT1G09000.1 27.365 296 159 11 517 796 75 330 2.50e-18 90.5
Msa0800840 AT3G59410.5 27.019 322 201 13 515 808 429 744 2.19e-16 85.1
Msa0800840 AT3G59410.4 27.019 322 201 13 515 808 430 745 2.21e-16 85.1
Msa0800840 AT3G59410.1 27.019 322 201 13 515 808 429 744 2.39e-16 84.7
Msa0800840 AT3G59410.3 27.019 322 201 13 515 808 429 744 2.39e-16 84.7
Msa0800840 AT3G59410.2 27.019 322 201 13 515 808 453 768 2.74e-16 84.7
Msa0800840 AT3G53930.1 27.795 331 178 13 503 818 13 297 7.17e-16 82.8
Msa0800840 AT3G53930.2 27.795 331 178 13 503 818 13 297 7.24e-16 82.8
Msa0800840 AT4G29810.1 27.961 304 151 14 515 797 74 330 2.13e-15 79.3
Msa0800840 AT1G07650.4 30.531 226 116 10 513 732 467 657 2.42e-15 81.3
Msa0800840 AT1G07650.3 30.531 226 116 10 513 732 654 844 2.53e-15 81.3
Msa0800840 AT1G07650.1 30.531 226 116 10 513 732 680 870 2.86e-15 81.3
Msa0800840 AT4G29810.2 27.961 304 151 14 515 797 83 339 2.95e-15 79.3
Msa0800840 AT1G07650.2 30.531 226 116 10 513 732 686 876 3.46e-15 80.9
Msa0800840 AT3G08720.1 32.512 203 113 9 646 833 246 439 3.52e-15 79.7
Msa0800840 AT3G08720.3 32.512 203 113 9 646 833 246 439 3.52e-15 79.7
Msa0800840 AT3G08720.4 32.512 203 113 9 646 833 246 439 3.52e-15 79.7
Msa0800840 AT3G08720.2 32.512 203 113 9 646 833 246 439 3.52e-15 79.7
Msa0800840 AT3G08730.1 33.333 183 98 9 646 813 240 413 8.05e-15 78.6
Msa0800840 AT3G08730.2 33.333 183 98 9 646 813 240 413 8.05e-15 78.6
Msa0800840 AT4G30960.1 26.908 249 130 8 562 803 81 284 9.82e-15 78.2
Msa0800840 AT2G38490.1 35.838 173 95 7 632 797 119 282 1.96e-14 77.0
Msa0800840 AT2G34290.1 29.518 166 109 5 636 797 103 264 2.56e-14 74.7
Msa0800840 AT1G30270.1 27.160 243 126 8 562 797 88 286 2.99e-14 77.0
Msa0800840 AT1G30270.2 27.160 243 126 8 562 797 88 286 3.22e-14 76.6
Msa0800840 AT4G04695.1 26.214 309 176 12 507 801 24 294 4.27e-14 76.6
Msa0800840 AT5G24430.1 25.526 333 188 11 496 811 128 417 6.42e-14 76.3
Msa0800840 AT5G66210.6 28.276 290 137 16 533 801 85 324 6.56e-14 75.5
Msa0800840 AT5G66210.4 28.276 290 137 16 533 801 85 324 6.56e-14 75.5
Msa0800840 AT5G66210.3 29.720 286 138 16 533 801 85 324 7.87e-14 75.5
Msa0800840 AT5G66210.5 29.720 286 138 16 533 801 85 324 8.27e-14 75.5
Msa0800840 AT5G27790.1 28.191 188 122 5 636 813 122 306 8.86e-14 73.9
Msa0800840 AT2G05060.1 25.680 331 198 10 506 828 9 299 1.12e-13 73.6
Msa0800840 AT5G66210.1 29.021 286 140 16 533 801 85 324 1.35e-13 75.1
Msa0800840 AT5G66210.2 29.021 286 140 16 533 801 85 324 1.35e-13 75.1
Msa0800840 AT1G53440.1 27.928 222 120 7 516 732 672 858 1.51e-13 75.5
Msa0800840 AT1G30270.3 33.129 163 93 6 642 797 36 189 1.64e-13 73.9
Msa0800840 AT3G53380.1 27.946 297 153 14 469 757 342 585 1.67e-13 75.1
Msa0800840 AT1G29730.1 32.599 227 107 13 513 732 643 830 1.83e-13 75.5
Msa0800840 AT1G70520.1 27.391 230 124 8 516 739 330 522 1.86e-13 75.1
Msa0800840 AT3G45240.2 34.524 168 98 8 642 805 218 377 1.95e-13 73.9
Msa0800840 AT3G45240.1 34.524 168 98 8 642 805 218 377 1.95e-13 73.9
Msa0800840 AT1G51660.1 28.704 216 136 7 593 797 126 334 2.30e-13 73.2
Msa0800840 AT1G29730.2 31.718 227 108 13 513 732 676 862 2.77e-13 74.7
Msa0800840 AT1G29730.4 31.718 227 109 12 513 732 643 830 2.91e-13 74.7
Msa0800840 AT4G29810.3 27.759 299 148 14 515 792 83 334 3.14e-13 72.4
Msa0800840 AT1G29730.3 31.718 227 108 13 513 732 676 862 4.16e-13 74.3
Msa0800840 AT5G45820.1 32.515 163 94 6 642 797 113 266 5.05e-13 72.8
Msa0800840 AT3G56760.1 24.860 358 212 11 464 804 77 394 6.09e-13 73.2
Msa0800840 AT5G21326.1 27.687 307 162 12 505 797 8 268 7.12e-13 72.4
Msa0800840 AT5G60550.1 30.726 179 110 6 625 795 196 368 8.43e-13 72.0
Msa0800840 AT4G28350.1 31.214 173 94 7 641 793 450 617 9.26e-13 72.8
Msa0800840 AT4G14580.1 33.918 171 96 8 642 805 124 284 1.27e-12 71.6
Msa0800840 AT2G30360.1 26.568 271 144 9 562 825 79 301 1.38e-12 71.2
Msa0800840 AT3G13530.1 27.152 302 170 12 512 804 21 281 1.38e-12 72.8
Msa0800840 AT5G56580.1 30.588 170 101 6 638 796 167 330 1.85e-12 70.5
Msa0800840 AT4G21390.2 24.100 361 216 13 395 742 415 730 1.86e-12 72.0
Msa0800840 AT4G21390.1 24.100 361 216 13 395 742 415 730 1.88e-12 72.0
Msa0800840 AT3G45240.3 34.524 168 95 9 642 805 218 374 3.47e-12 69.7
Msa0800840 AT5G14720.1 29.348 184 96 6 633 797 109 277 3.54e-12 70.9
Msa0800840 AT5G14720.2 29.348 184 96 6 633 797 109 277 3.54e-12 70.9
Msa0800840 AT5G55090.1 29.518 166 104 5 636 797 100 256 3.69e-12 70.1
Msa0800840 AT2G41930.1 32.164 171 104 6 645 805 116 284 4.53e-12 69.3
Msa0800840 AT2G25090.1 32.571 175 97 7 636 797 112 278 5.74e-12 69.7
Msa0800840 AT4G31170.7 24.407 295 165 11 513 793 133 383 5.86e-12 69.3
Msa0800840 AT4G31170.6 24.407 295 165 11 513 793 133 383 5.86e-12 69.3
Msa0800840 AT4G31170.5 24.407 295 165 11 513 793 133 383 5.86e-12 69.3
Msa0800840 AT4G31170.1 24.407 295 165 11 513 793 133 383 5.86e-12 69.3
Msa0800840 AT4G31170.2 24.407 295 165 11 513 793 133 383 5.86e-12 69.3
Msa0800840 AT4G31170.3 24.407 295 165 11 513 793 133 383 5.86e-12 69.3
Msa0800840 AT4G31170.8 24.407 295 165 11 513 793 133 383 5.86e-12 69.3
Msa0800840 AT5G55090.2 29.697 165 103 5 636 796 162 317 7.09e-12 69.3
Msa0800840 AT3G07980.2 26.246 301 174 11 512 804 21 281 8.31e-12 70.1
Msa0800840 AT3G49370.1 25.237 317 175 11 513 811 144 416 9.33e-12 69.3
Msa0800840 AT3G07980.1 26.246 301 174 11 512 804 21 281 9.81e-12 69.7
Msa0800840 AT3G54180.1 28.723 188 101 7 639 797 118 301 1.11e-11 67.4
Msa0800840 AT2G41910.1 30.000 190 108 8 636 814 108 283 1.35e-11 67.8
Msa0800840 AT5G18700.1 27.645 293 143 14 530 804 18 259 1.82e-11 68.9
Msa0800840 AT5G38210.1 26.906 223 127 6 513 733 360 548 1.86e-11 68.6
Msa0800840 AT4G21380.1 25.000 344 195 12 425 755 447 740 2.16e-11 68.6
Msa0800840 AT1G79620.5 26.953 256 141 11 513 760 666 883 2.22e-11 68.6
Msa0800840 AT1G79620.1 26.953 256 141 11 513 760 640 857 2.23e-11 68.6
Msa0800840 AT2G47060.6 36.585 123 66 5 636 750 50 168 2.30e-11 65.5
Msa0800840 AT4G01330.1 28.213 319 160 18 517 805 168 447 2.58e-11 67.8
Msa0800840 AT1G70130.1 37.273 110 61 4 641 747 434 538 2.96e-11 67.8
Msa0800840 AT5G38210.2 25.714 245 146 6 513 755 372 582 2.99e-11 67.8
Msa0800840 AT3G21220.2 26.014 296 158 14 517 797 76 325 3.06e-11 66.6
Msa0800840 AT3G21220.1 26.014 296 158 14 517 797 76 325 3.06e-11 66.6
Msa0800840 AT5G38210.3 25.714 245 146 6 513 755 354 564 3.23e-11 67.8
Msa0800840 AT1G29740.2 30.396 227 111 13 513 732 680 866 3.27e-11 68.2
Msa0800840 AT2G47060.5 36.585 123 66 5 636 750 168 286 3.84e-11 65.9
Msa0800840 AT1G29750.2 25.745 369 195 16 516 873 686 986 4.13e-11 67.8
Msa0800840 AT2G38620.4 31.200 125 74 5 614 733 32 149 4.37e-11 64.7
Msa0800840 AT1G29740.1 30.396 227 111 13 513 732 680 866 4.43e-11 67.8
Msa0800840 AT2G42550.1 28.272 191 130 5 610 794 82 271 4.57e-11 65.9
Msa0800840 AT2G39110.2 29.851 201 121 8 588 784 136 320 4.70e-11 66.6
Msa0800840 AT2G47060.3 36.585 123 66 5 636 750 69 187 5.02e-11 64.7
Msa0800840 AT1G29750.1 25.745 369 195 16 516 873 671 971 5.44e-11 67.4
Msa0800840 AT2G39110.1 29.851 201 121 8 588 784 151 335 5.53e-11 66.2
Msa0800840 AT2G28940.2 32.597 181 93 8 636 792 209 384 5.73e-11 66.6
Msa0800840 AT4G26070.4 34.031 191 106 9 629 805 154 338 5.88e-11 65.9
Msa0800840 AT2G28940.1 32.597 181 93 8 636 792 90 265 6.00e-11 65.5
Msa0800840 AT2G47060.2 36.585 123 66 5 636 750 168 286 6.40e-11 65.9
Msa0800840 AT2G47060.1 36.585 123 66 5 636 750 168 286 6.40e-11 65.9
Msa0800840 AT3G04810.2 25.676 296 162 12 515 797 8 258 6.70e-11 66.6
Msa0800840 AT3G04810.1 25.676 296 162 12 515 797 8 258 6.70e-11 66.6
Msa0800840 AT3G04810.3 25.676 296 162 12 515 797 8 258 6.70e-11 66.6
Msa0800840 AT4G01330.2 28.383 303 152 17 517 793 168 431 7.76e-11 66.2
Msa0800840 AT4G26070.5 34.031 191 106 9 629 805 142 326 7.81e-11 65.1
Msa0800840 AT4G01330.3 27.500 320 164 16 517 811 168 444 7.95e-11 65.9
Msa0800840 AT4G26890.1 30.120 166 101 5 636 797 99 253 7.95e-11 65.9
Msa0800840 AT1G16670.1 28.033 239 131 10 516 748 46 249 7.95e-11 65.5
Msa0800840 AT2G47060.4 36.585 123 66 5 636 750 168 286 8.15e-11 65.5
Msa0800840 AT4G26070.2 34.031 191 106 9 629 805 155 339 9.34e-11 65.1
Msa0800840 AT4G26070.3 34.031 191 106 9 629 805 155 339 9.34e-11 65.1
Msa0800840 AT1G17750.1 24.036 337 190 15 469 791 764 1048 9.48e-11 66.6

Find 242 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGATTAACAAAACATTT+TGG 0.102471 5_3:-14448174 None:intergenic
ATTACATAACTTTGGTAATT+TGG 0.147294 5_3:-14450930 None:intergenic
TATTGCATCATCCTCTATTT+TGG 0.157470 5_3:+14449898 Msa0800840:CDS
CATCCTTCTGTGCCTCTATT+TGG 0.161498 5_3:-14447246 None:intergenic
CCATACCATCGAACAATATT+TGG 0.183296 5_3:-14447082 None:intergenic
ACTAACAGGGATGTGGTTTC+TGG 0.184634 5_3:+14448103 Msa0800840:intron
ATGTGCCAAACTTTCTGATA+TGG 0.210133 5_3:+14448207 Msa0800840:CDS
TATCTAGTTGAAAGTGCTTC+TGG 0.231890 5_3:+14444839 Msa0800840:CDS
CACTGGCTTTAGGTGCAAAA+TGG 0.234573 5_3:+14450027 Msa0800840:CDS
CAAGAAGAAACCTGAATTTC+TGG 0.245839 5_3:-14450173 None:intergenic
TGAATTGTCAATGTCATTAT+TGG 0.250222 5_3:+14446664 Msa0800840:CDS
AGCGCCAGAGCAGCTTCTTC+AGG 0.253007 5_3:+14448655 Msa0800840:CDS
AAGACATAATTCATGGGTTT+TGG 0.253698 5_3:-14444558 None:intergenic
CAATCTGTGGGTTCTGGTTC+AGG 0.254138 5_3:+14446167 Msa0800840:CDS
TTGCCAACATTGGTCGTTAC+AGG 0.255444 5_3:+14450075 Msa0800840:CDS
AGTCAGAAGCAATGAGGTTT+TGG 0.260881 5_3:-14447054 None:intergenic
GGAATTGCCTCCAGAAATTC+AGG 0.269943 5_3:+14450163 Msa0800840:CDS
GTGCTTCTGGGAGGGTAATT+TGG 0.274259 5_3:+14444852 Msa0800840:CDS
TTGCACTATAATAATGTTAA+TGG 0.279884 5_3:+14446884 Msa0800840:CDS
ATCCTTCTGTGCCTCTATTT+GGG 0.283774 5_3:-14447245 None:intergenic
TTCAAATACAGTGCTCCTTT+TGG 0.285333 5_3:-14445940 None:intergenic
TGTATTCCTCTTGGTGATAA+AGG 0.290755 5_3:+14450864 Msa0800840:three_prime_UTR
GCCAATACTCCTCCGTCTTC+TGG 0.291254 5_3:+14444911 Msa0800840:CDS
CTTGAAGACATGTCTTCTTT+AGG 0.296981 5_3:+14448247 Msa0800840:CDS
GAAGAGAGAGTTGTTGGGAT+TGG 0.304464 5_3:-14444697 None:intergenic
CAGCAGCACCATAGCTTCTA+AGG 0.306346 5_3:-14445986 None:intergenic
TCTGGTAAATTAAGCTTTGC+TGG 0.311021 5_3:-14446107 None:intergenic
TCAAATCTGAGTCACTGATT+TGG 0.321448 5_3:-14446757 None:intergenic
CGACTTCCGTGCAAATAATA+AGG 0.322120 5_3:+14446073 Msa0800840:CDS
AATAATCAGTCCTAACTATC+TGG 0.327755 5_3:-14446139 None:intergenic
AAGAGAGAGTTGTTGGGATT+GGG 0.331180 5_3:-14444696 None:intergenic
TTAATCCTTAAGGCTATGTT+TGG 0.339493 5_3:-14444464 None:intergenic
TTTGCAGGCTGTGGCAGTTC+GGG 0.343692 5_3:+14448626 Msa0800840:intron
ATGTTTAATCCAGTGTTTAG+AGG 0.355509 5_3:+14450793 Msa0800840:three_prime_UTR
TGGAACCACATTCCATTGTT+TGG 0.355953 5_3:-14444401 None:intergenic
TTGGGATTGGGAGGTGGGGA+TGG 0.357454 5_3:-14444684 None:intergenic
GAAATTAGATCCTCTGCTTC+AGG 0.359545 5_3:-14448827 None:intergenic
GAGTTGTTGGGATTGGGAGG+TGG 0.362318 5_3:-14444690 None:intergenic
AATCCCCATATCAGAAAGTT+TGG 0.368474 5_3:-14448212 None:intergenic
TGCTGTCAAACGTCTTGTTC+AGG 0.374660 5_3:+14447003 Msa0800840:CDS
ATTTGCAGGCTGTGGCAGTT+CGG 0.379266 5_3:+14448625 Msa0800840:intron
TAAACCCTGACCCCAATCTA+AGG 0.380736 5_3:+14448858 Msa0800840:CDS
CTAACAGGGATGTGGTTTCT+GGG 0.381173 5_3:+14448104 Msa0800840:intron
TGGCATTCCATCATAACTTT+GGG 0.382087 5_3:-14450771 None:intergenic
ATTAGCCTTGATCATATAGA+TGG 0.382386 5_3:+14450646 Msa0800840:three_prime_UTR
ATGGCATTCCATCATAACTT+TGG 0.386160 5_3:-14450772 None:intergenic
TGTGCCAAACTTTCTGATAT+GGG 0.386739 5_3:+14448208 Msa0800840:CDS
AGCACTGCTCCACTGGCTTT+AGG 0.386884 5_3:+14450017 Msa0800840:CDS
AGTTGTTGGGATTGGGAGGT+GGG 0.387353 5_3:-14444689 None:intergenic
TAAGGCTATGTTTGGATTGG+TGG 0.390238 5_3:-14444456 None:intergenic
AGGATGATATGCAATGTCTT+TGG 0.391060 5_3:+14447263 Msa0800840:CDS
TGTACTCACCAGTAGAACTA+TGG 0.395638 5_3:-14448270 None:intergenic
TCTTTAGGCCATAGTTCTAC+TGG 0.397728 5_3:+14448262 Msa0800840:CDS
CCAGCCACCAGTGCCGTAAC+AGG 0.398229 5_3:-14444800 None:intergenic
GCCGTTAGTTTCGAATTCAT+TGG 0.398371 5_3:+14444769 Msa0800840:CDS
CTCATCAACTTTAGTAAAAG+TGG 0.398970 5_3:-14447307 None:intergenic
GGGAGAAATCTATCACTCTT+AGG 0.405694 5_3:-14446491 None:intergenic
ATCTAGTTGAAAGTGCTTCT+GGG 0.409158 5_3:+14444840 Msa0800840:CDS
TGGAAGCATCAGCTTTAAAT+CGG 0.409181 5_3:-14446462 None:intergenic
CCAAATATTGTTCGATGGTA+TGG 0.409739 5_3:+14447082 Msa0800840:CDS
TTATGAATGTAAACATAATC+TGG 0.413166 5_3:-14450712 None:intergenic
TGCAATACTTCAATCGCCTT+TGG 0.414925 5_3:-14449882 None:intergenic
GCTGTAGATTTGTTTAGTTT+AGG 0.415194 5_3:+14448692 Msa0800840:CDS
TTAGTATATAATACATTAGT+GGG 0.416536 5_3:+14450839 Msa0800840:three_prime_UTR
CGCTCAAGTCGCTCTCCAAA+TGG 0.417649 5_3:-14448752 None:intergenic
TGGAATCAAGACATAATTCA+TGG 0.417725 5_3:-14444565 None:intergenic
CGTCCCTGAAGAAGCTGCTC+TGG 0.418016 5_3:-14448659 None:intergenic
TTATTCCTAGTTCATGCAAA+TGG 0.423327 5_3:-14448132 None:intergenic
TCATTGAATCCTTCCGGAAC+AGG 0.425832 5_3:-14450511 None:intergenic
AAGTAGTCATTGAATCCTTC+CGG 0.429425 5_3:-14450517 None:intergenic
GGTGGAAGAGCGGGAGGAGA+GGG 0.433108 5_3:-14444737 None:intergenic
GGAACTGATAGGACCTGTTC+CGG 0.436582 5_3:+14450498 Msa0800840:intron
TGCATTACCATTACTATCAT+AGG 0.440736 5_3:-14446576 None:intergenic
CAAACAGAAAATTCTTTCGT+TGG 0.441930 5_3:-14446373 None:intergenic
CAAGGGAAGTTGATCTGAGC+AGG 0.442572 5_3:+14446636 Msa0800840:CDS
GAGAATGACATACCTTAGAT+TGG 0.442945 5_3:-14448870 None:intergenic
GACCTTCATATATCCCTTCA+AGG 0.444624 5_3:-14446973 None:intergenic
ACAAATCTACAGCCCGTGTT+TGG 0.446120 5_3:-14448682 None:intergenic
AGAATGACATACCTTAGATT+GGG 0.447622 5_3:-14448869 None:intergenic
CCTTAAGGCTATGTTTGGAT+TGG 0.449214 5_3:-14444459 None:intergenic
TGCAAAATGGGACGAAAAGA+TGG 0.452150 5_3:+14450040 Msa0800840:CDS
ATCAGCTTTAAATCGGGCAT+TGG 0.453000 5_3:-14446455 None:intergenic
GACGATGGCGGTGGAAGAGC+GGG 0.455649 5_3:-14444746 None:intergenic
ACCAGAAGACGGAGGAGTAT+TGG 0.457722 5_3:-14444912 None:intergenic
TTTGAAGTGGATGCTAAAAC+AGG 0.459175 5_3:+14445957 Msa0800840:CDS
ATCTTTCATGATCCCCACTT+TGG 0.459310 5_3:+14444965 Msa0800840:CDS
CCTGTTACGGCACTGGTGGC+TGG 0.460610 5_3:+14444800 Msa0800840:CDS
TCAGCTTTAAATCGGGCATT+GGG 0.460946 5_3:-14446454 None:intergenic
AATATCAGTTGCTATGTTAG+AGG 0.461212 5_3:+14450950 Msa0800840:three_prime_UTR
GCGCCAGAGCAGCTTCTTCA+GGG 0.464230 5_3:+14448656 Msa0800840:CDS
ATTAGTATATAATACATTAG+TGG 0.464242 5_3:+14450838 Msa0800840:three_prime_UTR
TGTGGAGAAGAGAGAGTTGT+TGG 0.464412 5_3:-14444703 None:intergenic
GTTGTTGGGATTGGGAGGTG+GGG 0.464952 5_3:-14444688 None:intergenic
TGGCTTGATAGTTTATCAAA+TGG 0.465117 5_3:+14450666 Msa0800840:three_prime_UTR
TTATTGAATGTGGTGATGAC+TGG 0.466806 5_3:+14444936 Msa0800840:CDS
ACATACCTTAGATTGGGGTC+AGG 0.467825 5_3:-14448863 None:intergenic
CCTTGGTGCAGTGATCTCCA+TGG 0.468092 5_3:-14446618 None:intergenic
CTGGTTCAGGAATAGTGTTA+TGG 0.471457 5_3:+14446180 Msa0800840:CDS
TGGCAAATGGCAACTGGTTG+AGG 0.471801 5_3:-14450735 None:intergenic
CGGTGGAAGAGCGGGAGGAG+AGG 0.473712 5_3:-14444738 None:intergenic
CTTGTCCATTTGCATGAACT+AGG 0.476007 5_3:+14448127 Msa0800840:CDS
ATTAGAGAGCACTGCTCCAC+TGG 0.476795 5_3:+14450010 Msa0800840:CDS
CTGGTTTATCAGGAACTGAT+AGG 0.478342 5_3:+14450487 Msa0800840:intron
AATCAGTGGCAAATGGCAAC+TGG 0.480170 5_3:-14450741 None:intergenic
GTGGAGAAGAGAGAGTTGTT+GGG 0.481274 5_3:-14444702 None:intergenic
TGATCCCCACTTTGGTAAAA+CGG 0.481566 5_3:+14444973 Msa0800840:CDS
ATGTTTGGATTGGTGGTGAG+TGG 0.481986 5_3:-14444449 None:intergenic
CTGCTCAGATCAACTTCCCT+TGG 0.482122 5_3:-14446635 None:intergenic
GCTCCATCTTTCGACACAAT+AGG 0.482665 5_3:-14445903 None:intergenic
CAGGCTGTGGCAGTTCGGGT+TGG 0.484799 5_3:+14448630 Msa0800840:intron
CATCATATTACCACCATGAC+CGG 0.489087 5_3:-14446513 None:intergenic
ACAGCAGGAAGACATCCATT+TGG 0.490940 5_3:+14448737 Msa0800840:CDS
ACGCCTATTGTGTCGAAAGA+TGG 0.491151 5_3:+14445900 Msa0800840:CDS
CAACTGATATTACATAACTT+TGG 0.491541 5_3:-14450938 None:intergenic
ATCTCAGAACTCCAAAATAG+AGG 0.492786 5_3:-14449909 None:intergenic
ACTGGCTTTAGGTGCAAAAT+GGG 0.494715 5_3:+14450028 Msa0800840:CDS
TTCTTCAGGGACGCCAAACA+CGG 0.496323 5_3:+14448669 Msa0800840:CDS
AATGGCACCATTGTCCTTGA+AGG 0.500351 5_3:+14446959 Msa0800840:CDS
GGAGAATATACGAATTCATA+AGG 0.500634 5_3:+14446841 Msa0800840:CDS
TAGTGGGATTGTATTCCTCT+TGG 0.504542 5_3:+14450855 Msa0800840:three_prime_UTR
AAAGATGGAGCTGTTATACT+TGG 0.504620 5_3:+14445915 Msa0800840:CDS
TGGAATGGAATGGGATGGAA+TGG 0.505037 5_3:-14444421 None:intergenic
CCAATCCAAACATAGCCTTA+AGG 0.505105 5_3:+14444459 Msa0800840:five_prime_UTR
ATTGGTGGTGAGTGGTGGAA+TGG 0.505446 5_3:-14444441 None:intergenic
GAAGAAGATGAAGATTGAAA+CGG 0.505506 5_3:-14444624 None:intergenic
CTATCACTCTTAGGTTGTGA+TGG 0.506586 5_3:-14446482 None:intergenic
GGATACATCTGCAACGATGC+AGG 0.506692 5_3:-14444663 None:intergenic
CAGAAAACCTGTTACGGCAC+TGG 0.509659 5_3:+14444793 Msa0800840:CDS
ACAGCGTCCGAGACTTGTTG+AGG 0.510213 5_3:+14450111 Msa0800840:CDS
GTGGTGGAATGGAATGGAAT+GGG 0.510533 5_3:-14444430 None:intergenic
CCAGCTTTCATTGCCAACAT+TGG 0.511232 5_3:+14450065 Msa0800840:CDS
CCAATGTTGGCAATGAAAGC+TGG 0.511372 5_3:-14450065 None:intergenic
GGAAAGCTCCTTAGAAGCTA+TGG 0.513931 5_3:+14445978 Msa0800840:CDS
TTCAGATTTGTCAGAAAACT+CGG 0.515086 5_3:+14447183 Msa0800840:CDS
GGAGCGTTGTGCATGCAACT+TGG 0.515887 5_3:+14447141 Msa0800840:CDS
AGTCTAACCCAAAGTTATGA+TGG 0.516978 5_3:+14450764 Msa0800840:three_prime_UTR
AGAGAGTTGTTGGGATTGGG+AGG 0.517951 5_3:-14444693 None:intergenic
TTTGGATTGGTGGTGAGTGG+TGG 0.518376 5_3:-14444446 None:intergenic
ACTTTGCAAGTCGATTTCCT+AGG 0.520525 5_3:+14450536 Msa0800840:CDS
TTAAATAAAGAAATCGCAAA+GGG 0.522398 5_3:+14446932 Msa0800840:CDS
ATTGGACAGAAAACCTGTTA+CGG 0.523174 5_3:+14444787 Msa0800840:CDS
CATACCTTAGATTGGGGTCA+GGG 0.524041 5_3:-14448862 None:intergenic
GATAGATTTCTCCCCGGTCA+TGG 0.524362 5_3:+14446500 Msa0800840:CDS
AACTTTAGTAAAAGTGGAGA+TGG 0.524497 5_3:-14447301 None:intergenic
TTTGTCCACTAACAGGGATG+TGG 0.525132 5_3:+14448096 Msa0800840:intron
ATCATATTACCACCATGACC+GGG 0.528935 5_3:-14446512 None:intergenic
ATATAATTTGGCACAGTCAC+AGG 0.530450 5_3:-14446539 None:intergenic
TCAAGCCATCTATATGATCA+AGG 0.531790 5_3:-14450651 None:intergenic
TTCATCCAAATATTGTTCGA+TGG 0.531830 5_3:+14447077 Msa0800840:CDS
CTGTTATACTTGGATCCAAA+AGG 0.532478 5_3:+14445925 Msa0800840:CDS
CTTGGTGCAGTGATCTCCAT+GGG 0.533813 5_3:-14446617 None:intergenic
TTAGACTAATCAGTGGCAAA+TGG 0.534683 5_3:-14450748 None:intergenic
GAAATCGCAAAGGGAAGTAA+TGG 0.534963 5_3:+14446941 Msa0800840:CDS
GTTGATGCTTATCAAGAGAA+AGG 0.535298 5_3:+14446425 Msa0800840:CDS
TCATTTAATTGTCAGGCCAA+AGG 0.535570 5_3:+14449866 Msa0800840:intron
GGCCCAAATAGAGGCACAGA+AGG 0.535622 5_3:+14447243 Msa0800840:CDS
GCACTGGTGGCTGGTTTAGA+CGG 0.536256 5_3:+14444809 Msa0800840:CDS
GTGATCTCCATGGGAGGCTG+CGG 0.539014 5_3:-14446608 None:intergenic
AGTGGTGGAATGGAATGGAA+TGG 0.539971 5_3:-14444431 None:intergenic
GTGCCAAACTTTCTGATATG+GGG 0.540780 5_3:+14448209 Msa0800840:CDS
TGGTGAGTGGTGGAATGGAA+TGG 0.542514 5_3:-14444436 None:intergenic
TGCATCAAGTGAAGCTGTCA+AGG 0.545531 5_3:-14446261 None:intergenic
AATGTTAATGGACGCAGGAT+CGG 0.546974 5_3:+14446896 Msa0800840:CDS
CAAGCTCCTTATTATTTGCA+CGG 0.551838 5_3:-14446079 None:intergenic
TCATGACCCTCAACAAGTCT+CGG 0.551931 5_3:-14450118 None:intergenic
GGAAGCATCAGCTTTAAATC+GGG 0.552574 5_3:-14446461 None:intergenic
CAATGTCTTTGGAAATCGAA+TGG 0.553385 5_3:+14447274 Msa0800840:CDS
GTCCTTGAAGGGATATATGA+AGG 0.553647 5_3:+14446971 Msa0800840:CDS
AAAATCACCTATGATAGTAA+TGG 0.555445 5_3:+14446569 Msa0800840:CDS
TCTTCAGGGACGCCAAACAC+GGG 0.556320 5_3:+14448670 Msa0800840:CDS
TTCGAAACTAACGGCGACGA+TGG 0.557382 5_3:-14444761 None:intergenic
ATTATTGGTTGTATTATCTG+TGG 0.560576 5_3:+14446679 Msa0800840:CDS
AGAGTTTCTTCCTGAAGCAG+AGG 0.562454 5_3:+14448817 Msa0800840:CDS
TATGCTTCCGCAGCCTCCCA+TGG 0.564293 5_3:+14446601 Msa0800840:CDS
TCATAAGGAAGCAGAAAATG+AGG 0.565601 5_3:+14446856 Msa0800840:CDS
TTATGATGTTGACAGTGGCT+TGG 0.565769 5_3:+14446298 Msa0800840:CDS
TACACTTCAATCAAGAGCCT+AGG 0.567714 5_3:-14450553 None:intergenic
AAGGAGCACTGTATTTGAAG+TGG 0.567852 5_3:+14445944 Msa0800840:CDS
GGAATCAAGACATAATTCAT+GGG 0.568705 5_3:-14444564 None:intergenic
AGACGGAGGAGTATTGGCAG+AGG 0.569421 5_3:-14444906 None:intergenic
ACAGCTTCACTTGATGCAGA+AGG 0.569623 5_3:+14446266 Msa0800840:CDS
TTGAAACCTGCAGAGACTCA+AGG 0.571885 5_3:+14445851 Msa0800840:intron
ACTAACGGCGACGATGGCGG+TGG 0.573193 5_3:-14444755 None:intergenic
TTTCTGTCAGGACACGCATA+CGG 0.575186 5_3:-14446332 None:intergenic
TGGAATGGAATGGAATGGGA+TGG 0.578099 5_3:-14444426 None:intergenic
CAGCGTCCGAGACTTGTTGA+GGG 0.579276 5_3:+14450112 Msa0800840:CDS
TCGCCTGTAACGACCAATGT+TGG 0.582138 5_3:-14450078 None:intergenic
ATCAGTTGCTATGTTAGAGG+TGG 0.583729 5_3:+14450953 Msa0800840:three_prime_UTR
GAGGAGTATTGGCAGAGGAA+TGG 0.586760 5_3:-14444901 None:intergenic
GTTTATCAAATGGCAAAGAA+CGG 0.587259 5_3:+14450676 Msa0800840:three_prime_UTR
TATTGAATGTGGTGATGACT+GGG 0.590060 5_3:+14444937 Msa0800840:CDS
CGACGATGGCGGTGGAAGAG+CGG 0.595776 5_3:-14444747 None:intergenic
CAAAACCAAACAATGGAATG+TGG 0.596422 5_3:+14444396 Msa0800840:five_prime_UTR
TCAAGTGAAGCTGTCAAGGT+AGG 0.598978 5_3:-14446257 None:intergenic
TCTTCTGGTCTTATTGAATG+TGG 0.602348 5_3:+14444926 Msa0800840:CDS
ATGGCACCATTGTCCTTGAA+GGG 0.603709 5_3:+14446960 Msa0800840:CDS
CATGGAGATCACTGCACCAA+GGG 0.603861 5_3:+14446619 Msa0800840:CDS
TATGTCAGTAGCTGAATTTG+AGG 0.604011 5_3:+14446205 Msa0800840:CDS
AGTTGAAAGTGCTTCTGGGA+GGG 0.605366 5_3:+14444844 Msa0800840:CDS
TAGTTGAATCCTCTAAACAC+TGG 0.607124 5_3:-14450802 None:intergenic
ATTAAATAAAGAAATCGCAA+AGG 0.608576 5_3:+14446931 Msa0800840:CDS
ATGTTAGAGGTGGAGATCGA+CGG 0.610075 5_3:+14450963 Msa0800840:three_prime_UTR
ATATATCCCTTCAAGGACAA+TGG 0.611274 5_3:-14446966 None:intergenic
ACAGTTCCTTTATCACCAAG+AGG 0.611346 5_3:-14450870 None:intergenic
TCCAATGAATTCGAAACTAA+CGG 0.611494 5_3:-14444770 None:intergenic
GATGAAAGTCAGAAGCAATG+AGG 0.611513 5_3:-14447060 None:intergenic
TTGGCAGAGGAATGGTAGAT+CGG 0.614229 5_3:-14444893 None:intergenic
ATGCACAACGCTCCAGAGCA+AGG 0.615402 5_3:-14447132 None:intergenic
ATAATAATGTTAATGGACGC+AGG 0.616006 5_3:+14446891 Msa0800840:CDS
AGTTATCTGCAACTACTGCA+AGG 0.617433 5_3:+14450579 Msa0800840:CDS
ATGAACTAGGAATAATACAC+CGG 0.621550 5_3:+14448140 Msa0800840:CDS
GATGGCGGTGGAAGAGCGGG+AGG 0.623526 5_3:-14444743 None:intergenic
CTGATAGGACCTGTTCCGGA+AGG 0.623740 5_3:+14450502 Msa0800840:CDS
AAAACCTGTTACGGCACTGG+TGG 0.625351 5_3:+14444796 Msa0800840:CDS
GAGAGGGAGAGAAACCGTTG+TGG 0.628592 5_3:-14444721 None:intergenic
TCTACTACTGCAATGTGGAG+TGG 0.629640 5_3:+14446023 Msa0800840:CDS
TTGAAGGGATATATGAAGGT+CGG 0.632387 5_3:+14446975 Msa0800840:CDS
AACAGCAACATAATCAGCAA+CGG 0.639691 5_3:-14445877 None:intergenic
TGCAATGTGGAGTGGTGACA+AGG 0.646125 5_3:+14446031 Msa0800840:CDS
GGTGCAGTGATCTCCATGGG+AGG 0.646808 5_3:-14446614 None:intergenic
AAGGGAAGTTGATCTGAGCA+GGG 0.657506 5_3:+14446637 Msa0800840:CDS
GAAACTAACGGCGACGATGG+CGG 0.659977 5_3:-14444758 None:intergenic
CCATGGAGATCACTGCACCA+AGG 0.661190 5_3:+14446618 Msa0800840:CDS
TCTAAACACTGGATTAAACA+TGG 0.663613 5_3:-14450791 None:intergenic
GAATGACATACCTTAGATTG+GGG 0.664281 5_3:-14448868 None:intergenic
AAGAGTGATAGATTTCTCCC+CGG 0.666927 5_3:+14446494 Msa0800840:CDS
GAAGAAACCTGAATTTCTGG+AGG 0.674226 5_3:-14450170 None:intergenic
CTTTGGGTTAGACTAATCAG+TGG 0.674905 5_3:-14450755 None:intergenic
AGGAAGCAGAAAATGAGGCA+CGG 0.679814 5_3:+14446861 Msa0800840:CDS
AGATTTCTCCCCGGTCATGG+TGG 0.682682 5_3:+14446503 Msa0800840:CDS
TCGCGACGTTAGTGACAGAG+TGG 0.683668 5_3:+14449947 Msa0800840:CDS
CAACTCTCTCTTCTCCACAA+CGG 0.685419 5_3:+14444707 Msa0800840:CDS
TAGTTGAAAGTGCTTCTGGG+AGG 0.687578 5_3:+14444843 Msa0800840:CDS
TGAACTAGGAATAATACACC+GGG 0.688701 5_3:+14448141 Msa0800840:CDS
ATGTTTCTACTACTGCAATG+TGG 0.690754 5_3:+14446018 Msa0800840:CDS
TCATATTACCACCATGACCG+GGG 0.691294 5_3:-14446511 None:intergenic
TATTGTTCGATGGTATGGTG+TGG 0.697518 5_3:+14447087 Msa0800840:CDS
CATTCAATAAGACCAGAAGA+CGG 0.705732 5_3:-14444923 None:intergenic
TATGCTTATGATGTTGACAG+TGG 0.706219 5_3:+14446293 Msa0800840:CDS
GAGTGGTGACAAGGACAGTG+AGG 0.708835 5_3:+14446040 Msa0800840:CDS
TCAATAAGACCAGAAGACGG+AGG 0.754525 5_3:-14444920 None:intergenic
AGTGGTGACAAGGACAGTGA+GGG 0.770404 5_3:+14446041 Msa0800840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAATAAAATAAAAAT+AGG - chr5_3:14448057-14448076 None:intergenic 0.0%
!!! TTTTTTTTTTACTTTTACTT+TGG + chr5_3:14445022-14445041 Msa0800840:intron 10.0%
!!! TTTTTTTTTACTTTTACTTT+GGG + chr5_3:14445023-14445042 Msa0800840:intron 10.0%
!! AAAAAAAAAAATATCTAGGA+AGG - chr5_3:14447380-14447399 None:intergenic 15.0%
!! TTTATATGATTATTCAGTTA+TGG + chr5_3:14447596-14447615 Msa0800840:intron 15.0%
!! TTATATGATTATTCAGTTAT+GGG + chr5_3:14447597-14447616 Msa0800840:intron 15.0%
!! TTTATATTAATATGTAGTGA+TGG + chr5_3:14449107-14449126 Msa0800840:intron 15.0%
!!! AATTTTTTCATTTAATTGTC+AGG + chr5_3:14449859-14449878 Msa0800840:intron 15.0%
!! TTAGAAAAATAGAAAATGTT+TGG - chr5_3:14450324-14450343 None:intergenic 15.0%
!! ATTAGTATATAATACATTAG+TGG + chr5_3:14450838-14450857 Msa0800840:three_prime_UTR 15.0%
!! TTAGTATATAATACATTAGT+GGG + chr5_3:14450839-14450858 Msa0800840:three_prime_UTR 15.0%
!!! ATGTTTTTGTTTAATCCTTA+AGG - chr5_3:14444477-14444496 None:intergenic 20.0%
!!! TTTTTCGGTTTTTAAGATTT+TGG - chr5_3:14444538-14444557 None:intergenic 20.0%
!!! TGATTTTGATTGAATTGATT+AGG + chr5_3:14445090-14445109 Msa0800840:intron 20.0%
!!! GATTTTAGTTAAAATTGAGT+TGG + chr5_3:14445119-14445138 Msa0800840:intron 20.0%
!!! TTTTATGTATAAGCTATTTC+TGG + chr5_3:14445429-14445448 Msa0800840:intron 20.0%
!!! CAACTTTAAAATGTAACTTA+AGG - chr5_3:14445631-14445650 None:intergenic 20.0%
!!! TGATTATTTTTTACAATCTG+TGG + chr5_3:14446154-14446173 Msa0800840:CDS 20.0%
!!! GATTATTTTTTACAATCTGT+GGG + chr5_3:14446155-14446174 Msa0800840:CDS 20.0%
!!! GATAATCTTTGAATTTTATC+AGG - chr5_3:14446401-14446420 None:intergenic 20.0%
!!! CATTATTTTTTAACCGATTT+TGG - chr5_3:14446724-14446743 None:intergenic 20.0%
!! AAAAAATAATGTTACATCGA+AGG + chr5_3:14446733-14446752 Msa0800840:CDS 20.0%
!! TTGCACTATAATAATGTTAA+TGG + chr5_3:14446884-14446903 Msa0800840:CDS 20.0%
!! ATTAAATAAAGAAATCGCAA+AGG + chr5_3:14446931-14446950 Msa0800840:CDS 20.0%
!! TTAAATAAAGAAATCGCAAA+GGG + chr5_3:14446932-14446951 Msa0800840:CDS 20.0%
!!! AGGTTTTGATATTTTTAAGA+AGG + chr5_3:14447222-14447241 Msa0800840:CDS 20.0%
!! TTTCTAATGTCAAAACATTA+AGG - chr5_3:14447563-14447582 None:intergenic 20.0%
!!! GACAATTTTTATGAATAACA+AGG + chr5_3:14447684-14447703 Msa0800840:intron 20.0%
!!! ATTTTTATGAATAACAAGGA+TGG + chr5_3:14447688-14447707 Msa0800840:intron 20.0%
!!! TTTTTATGAATAACAAGGAT+GGG + chr5_3:14447689-14447708 Msa0800840:intron 20.0%
!! ATGATTGACTAGAATAATTT+AGG + chr5_3:14447773-14447792 Msa0800840:intron 20.0%
!!! TTAAATATAGGTGTTGTAAA+TGG - chr5_3:14447956-14447975 None:intergenic 20.0%
!! AAATAGGTGTAATTTAAACA+TGG - chr5_3:14448041-14448060 None:intergenic 20.0%
!!! TTGATTAACAAAACATTTTG+GGG - chr5_3:14448175-14448194 None:intergenic 20.0%
!!! CTTGATTAACAAAACATTTT+GGG - chr5_3:14448176-14448195 None:intergenic 20.0%
!!! CTATTTATTTTCTGTGTATA+TGG + chr5_3:14448473-14448492 Msa0800840:intron 20.0%
!! AAAATGCAAACTATTAATGA+AGG - chr5_3:14448939-14448958 None:intergenic 20.0%
!! TCACATCATTTAAAAATGTT+GGG - chr5_3:14449206-14449225 None:intergenic 20.0%
!! ATCACATCATTTAAAAATGT+TGG - chr5_3:14449207-14449226 None:intergenic 20.0%
!! TAAATAAATATGACAGAGAA+TGG + chr5_3:14449239-14449258 Msa0800840:intron 20.0%
!!! GAAAAATTTTAAATGCTTAC+TGG - chr5_3:14449405-14449424 None:intergenic 20.0%
!!! ACTTTTGCATATATTAAAAC+CGG - chr5_3:14449522-14449541 None:intergenic 20.0%
!!! CTTTTGCTTATATTTAAAAC+CGG + chr5_3:14449583-14449602 Msa0800840:intron 20.0%
!! TGCTTAAACTATTAACAAAT+GGG + chr5_3:14449745-14449764 Msa0800840:intron 20.0%
!!! AAACAAGCTAAATCATTTTA+GGG + chr5_3:14450142-14450161 Msa0800840:CDS 20.0%
!! TTATGAATGTAAACATAATC+TGG - chr5_3:14450715-14450734 None:intergenic 20.0%
!!! ATTACATAACTTTGGTAATT+TGG - chr5_3:14450933-14450952 None:intergenic 20.0%
!!! TTTTTTGCAAAACCAAACAA+TGG + chr5_3:14444389-14444408 Msa0800840:five_prime_UTR 25.0%
!!! TCATGTTGTTATGTTTTGTT+TGG - chr5_3:14444598-14444617 None:intergenic 25.0%
!! TTTTTACCTTAATGTGTGTT+TGG + chr5_3:14445049-14445068 Msa0800840:intron 25.0%
! ACAAAATAAAATCAAACCGT+CGG + chr5_3:14445460-14445479 Msa0800840:intron 25.0%
!! AGTATTTATTCCTTTTGTCT+CGG - chr5_3:14445559-14445578 None:intergenic 25.0%
!! TTAAGGTTAATAAGTTGGAT+TGG - chr5_3:14445614-14445633 None:intergenic 25.0%
! GTAACTTAAGGTTAATAAGT+TGG - chr5_3:14445619-14445638 None:intergenic 25.0%
! ACACATCAAATTCATAATCA+TGG + chr5_3:14445695-14445714 Msa0800840:intron 25.0%
!! TTACTATCATAGGTGATTTT+CGG - chr5_3:14446569-14446588 None:intergenic 25.0%
! AAAATCACCTATGATAGTAA+TGG + chr5_3:14446569-14446588 Msa0800840:CDS 25.0%
! TGAATTGTCAATGTCATTAT+TGG + chr5_3:14446664-14446683 Msa0800840:CDS 25.0%
!! ATTATTGGTTGTATTATCTG+TGG + chr5_3:14446679-14446698 Msa0800840:CDS 25.0%
!! TTTTGATGTTGTACCAAAAT+CGG + chr5_3:14446708-14446727 Msa0800840:CDS 25.0%
! AAAAAACAACATCATTGTTG+AGG + chr5_3:14446820-14446839 Msa0800840:CDS 25.0%
! ACATAACATTTATTCTGTCT+TGG - chr5_3:14447428-14447447 None:intergenic 25.0%
! GACATTAGAAATTAAAGCAA+AGG + chr5_3:14447572-14447591 Msa0800840:intron 25.0%
! CCTATATTTAAGCTAAGTAT+CGG + chr5_3:14447965-14447984 Msa0800840:intron 25.0%
! TAATTTAAACATGGAGTTAG+TGG - chr5_3:14448032-14448051 None:intergenic 25.0%
!! CCTTGATTAACAAAACATTT+TGG - chr5_3:14448177-14448196 None:intergenic 25.0%
!!! CCAAAATGTTTTGTTAATCA+AGG + chr5_3:14448174-14448193 Msa0800840:CDS 25.0%
!!! ATGTTTTGTTAATCAAGGAA+AGG + chr5_3:14448179-14448198 Msa0800840:CDS 25.0%
! TTAGCAATGTTATTAAACTC+AGG + chr5_3:14448327-14448346 Msa0800840:intron 25.0%
! TACATGTTTGAATTAGCATA+TGG - chr5_3:14448523-14448542 None:intergenic 25.0%
! TTAAACATTATTGTATGAGC+AGG - chr5_3:14448599-14448618 None:intergenic 25.0%
! ATGTTTAATGACTTATTTGC+AGG + chr5_3:14448611-14448630 Msa0800840:intron 25.0%
!! TTTTTATTCTTTCAGAAACC+TGG + chr5_3:14449140-14449159 Msa0800840:intron 25.0%
!!! ATATTCATTTTGGTGCTTTT+GGG + chr5_3:14449446-14449465 Msa0800840:intron 25.0%
! TGCAAAAGTCAAAATGTATT+CGG + chr5_3:14449533-14449552 Msa0800840:intron 25.0%
! CTGCTTAAACTATTAACAAA+TGG + chr5_3:14449744-14449763 Msa0800840:intron 25.0%
! GTATTATAGCTCTTACTAAT+TGG + chr5_3:14449770-14449789 Msa0800840:intron 25.0%
! AACACAAATCTATATACTTC+CGG - chr5_3:14449801-14449820 None:intergenic 25.0%
!! GAAACAAGCTAAATCATTTT+AGG + chr5_3:14450141-14450160 Msa0800840:CDS 25.0%
!!! TTCTGTTTTCCTTTTTTATC+TGG + chr5_3:14450214-14450233 Msa0800840:intron 25.0%
! ACTTATAATTTCTTTCTTGC+TGG + chr5_3:14450468-14450487 Msa0800840:intron 25.0%
! CAACTGATATTACATAACTT+TGG - chr5_3:14450941-14450960 None:intergenic 25.0%
TTAATCCTTAAGGCTATGTT+TGG - chr5_3:14444467-14444486 None:intergenic 30.0%
!!! ATTCATGGGTTTTGGTTTTT+CGG - chr5_3:14444553-14444572 None:intergenic 30.0%
! AAGACATAATTCATGGGTTT+TGG - chr5_3:14444561-14444580 None:intergenic 30.0%
GGAATCAAGACATAATTCAT+GGG - chr5_3:14444567-14444586 None:intergenic 30.0%
TGGAATCAAGACATAATTCA+TGG - chr5_3:14444568-14444587 None:intergenic 30.0%
!!! ATGTTTTGTTTGGTGGAAAA+TGG - chr5_3:14444588-14444607 None:intergenic 30.0%
!!! TGTTGTTATGTTTTGTTTGG+TGG - chr5_3:14444595-14444614 None:intergenic 30.0%
GAAGAAGATGAAGATTGAAA+CGG - chr5_3:14444627-14444646 None:intergenic 30.0%
TCCAATGAATTCGAAACTAA+CGG - chr5_3:14444773-14444792 None:intergenic 30.0%
!! GTAATTTGGTCTTTTTCATC+TGG + chr5_3:14444866-14444885 Msa0800840:CDS 30.0%
! TAATACCGTTTTACCAAAGT+GGG - chr5_3:14444981-14445000 None:intergenic 30.0%
! ATAATACCGTTTTACCAAAG+TGG - chr5_3:14444982-14445001 None:intergenic 30.0%
TTAATGTGTGTTTGGTTATG+CGG + chr5_3:14445057-14445076 Msa0800840:intron 30.0%
TAGCTACTAATTGTAGTTTC+AGG + chr5_3:14445209-14445228 Msa0800840:intron 30.0%
GAACAGATTTAGACATGTTT+GGG - chr5_3:14445266-14445285 None:intergenic 30.0%
AGAACAGATTTAGACATGTT+TGG - chr5_3:14445267-14445286 None:intergenic 30.0%
CAAAATAAAATCAAACCGTC+GGG + chr5_3:14445461-14445480 Msa0800840:intron 30.0%
AAAATAAAATCAAACCGTCG+GGG + chr5_3:14445462-14445481 Msa0800840:intron 30.0%
AGACATCAAAATTATCTTGG+AGG - chr5_3:14445783-14445802 None:intergenic 30.0%
GACAGACATCAAAATTATCT+TGG - chr5_3:14445786-14445805 None:intergenic 30.0%
!! GTTGACTTTTCTTCAATGTA+TGG + chr5_3:14445808-14445827 Msa0800840:intron 30.0%
AATAATCAGTCCTAACTATC+TGG - chr5_3:14446142-14446161 None:intergenic 30.0%
! AGGTAGGATTTTCATTATGT+TGG - chr5_3:14446244-14446263 None:intergenic 30.0%
CAAACAGAAAATTCTTTCGT+TGG - chr5_3:14446376-14446395 None:intergenic 30.0%
! ATTTTCGGCTGCATATAATT+TGG - chr5_3:14446554-14446573 None:intergenic 30.0%
TGCATTACCATTACTATCAT+AGG - chr5_3:14446579-14446598 None:intergenic 30.0%
!!! CGTACTCTCTTTTTTTTAGA+AGG - chr5_3:14446791-14446810 None:intergenic 30.0%
GGAGAATATACGAATTCATA+AGG + chr5_3:14446841-14446860 Msa0800840:CDS 30.0%
! ATAATAATGTTAATGGACGC+AGG + chr5_3:14446891-14446910 Msa0800840:CDS 30.0%
TTCATCCAAATATTGTTCGA+TGG + chr5_3:14447077-14447096 Msa0800840:CDS 30.0%
TTCAGATTTGTCAGAAAACT+CGG + chr5_3:14447183-14447202 Msa0800840:CDS 30.0%
!!! AGAAAACTCGGTTTTAAGTA+AGG + chr5_3:14447195-14447214 Msa0800840:CDS 30.0%
AACTTTAGTAAAAGTGGAGA+TGG - chr5_3:14447304-14447323 None:intergenic 30.0%
CTCATCAACTTTAGTAAAAG+TGG - chr5_3:14447310-14447329 None:intergenic 30.0%
!!! CACTTTTACTAAAGTTGATG+AGG + chr5_3:14447308-14447327 Msa0800840:CDS 30.0%
ATGTACACTGTACTTTGTTA+AGG + chr5_3:14447627-14447646 Msa0800840:intron 30.0%
!! CTTTGTTAAGGTTGATGTTT+AGG + chr5_3:14447639-14447658 Msa0800840:intron 30.0%
TTGAATCCGATTGAATTGTT+AGG + chr5_3:14447901-14447920 Msa0800840:intron 30.0%
ATTCCTCCTAACAATTCAAT+CGG - chr5_3:14447910-14447929 None:intergenic 30.0%
GTTGTAAATGGAAACAAAAC+AGG - chr5_3:14447944-14447963 None:intergenic 30.0%
CCGATACTTAGCTTAAATAT+AGG - chr5_3:14447968-14447987 None:intergenic 30.0%
!! ATATTTAAGCTAAGTATCGG+AGG + chr5_3:14447968-14447987 Msa0800840:intron 30.0%
!!! TGTTATTTTTGTCCACTAAC+AGG + chr5_3:14448089-14448108 Msa0800840:intron 30.0%
!!! GTTATTTTTGTCCACTAACA+GGG + chr5_3:14448090-14448109 Msa0800840:intron 30.0%
TTATTCCTAGTTCATGCAAA+TGG - chr5_3:14448135-14448154 None:intergenic 30.0%
ATGAACTAGGAATAATACAC+CGG + chr5_3:14448140-14448159 Msa0800840:CDS 30.0%
GAATTAGCATATGGAATGTA+TGG - chr5_3:14448514-14448533 None:intergenic 30.0%
AGTTATGTAGATTAACACGT+AGG - chr5_3:14448565-14448584 None:intergenic 30.0%
! GCTGTAGATTTGTTTAGTTT+AGG + chr5_3:14448692-14448711 Msa0800840:CDS 30.0%
AGAATGACATACCTTAGATT+GGG - chr5_3:14448872-14448891 None:intergenic 30.0%
ACATATGAATCCATCGTTTA+TGG - chr5_3:14448992-14449011 None:intergenic 30.0%
ATTGAGATGTTATTCACAGA+AGG - chr5_3:14449043-14449062 None:intergenic 30.0%
!! TTTGAACTTTGAAACACTAG+AGG - chr5_3:14449076-14449095 None:intergenic 30.0%
GTTTCAAAGTTCAAATCAAC+TGG + chr5_3:14449081-14449100 Msa0800840:intron 30.0%
TAAATATGACAGAGAATGGT+TGG + chr5_3:14449243-14449262 Msa0800840:intron 30.0%
AAATATGACAGAGAATGGTT+GGG + chr5_3:14449244-14449263 Msa0800840:intron 30.0%
TGAGTTCCTATATATCTAAC+AGG - chr5_3:14449271-14449290 None:intergenic 30.0%
! TTTTCAGTAACTCTGATTGA+AGG - chr5_3:14449340-14449359 None:intergenic 30.0%
!!! GATATTCATTTTGGTGCTTT+TGG + chr5_3:14449445-14449464 Msa0800840:intron 30.0%
! TTGCTTATATTTAAAACCGG+AGG + chr5_3:14449586-14449605 Msa0800840:intron 30.0%
! TGCTTATATTTAAAACCGGA+GGG + chr5_3:14449587-14449606 Msa0800840:intron 30.0%
GCAAAATAAGTTATATTCCC+AGG + chr5_3:14449663-14449682 Msa0800840:intron 30.0%
AAGTTATATTCCCAGGAAAT+TGG + chr5_3:14449670-14449689 Msa0800840:intron 30.0%
TTATAGCTCTTACTAATTGG+AGG + chr5_3:14449773-14449792 Msa0800840:intron 30.0%
! TATTGCATCATCCTCTATTT+TGG + chr5_3:14449898-14449917 Msa0800840:CDS 30.0%
! GTCTAAATAAGTTGAAATCC+AGG + chr5_3:14450252-14450271 Msa0800840:intron 30.0%
TAAAATCACTACTCAAGTGT+CGG - chr5_3:14450290-14450309 None:intergenic 30.0%
!! ATTAGCCTTGATCATATAGA+TGG + chr5_3:14450646-14450665 Msa0800840:three_prime_UTR 30.0%
! TGGCTTGATAGTTTATCAAA+TGG + chr5_3:14450666-14450685 Msa0800840:three_prime_UTR 30.0%
GTTTATCAAATGGCAAAGAA+CGG + chr5_3:14450676-14450695 Msa0800840:three_prime_UTR 30.0%
TCTAAACACTGGATTAAACA+TGG - chr5_3:14450794-14450813 None:intergenic 30.0%
ATGTTTAATCCAGTGTTTAG+AGG + chr5_3:14450793-14450812 Msa0800840:three_prime_UTR 30.0%
AATATCAGTTGCTATGTTAG+AGG + chr5_3:14450950-14450969 Msa0800840:three_prime_UTR 30.0%
CAAAACCAAACAATGGAATG+TGG + chr5_3:14444396-14444415 Msa0800840:five_prime_UTR 35.0%
ATTGGACAGAAAACCTGTTA+CGG + chr5_3:14444787-14444806 Msa0800840:CDS 35.0%
!! TATCTAGTTGAAAGTGCTTC+TGG + chr5_3:14444839-14444858 Msa0800840:CDS 35.0%
!! ATCTAGTTGAAAGTGCTTCT+GGG + chr5_3:14444840-14444859 Msa0800840:CDS 35.0%
CATTCAATAAGACCAGAAGA+CGG - chr5_3:14444926-14444945 None:intergenic 35.0%
!! TCTTCTGGTCTTATTGAATG+TGG + chr5_3:14444926-14444945 Msa0800840:CDS 35.0%
! TTATTGAATGTGGTGATGAC+TGG + chr5_3:14444936-14444955 Msa0800840:CDS 35.0%
! TATTGAATGTGGTGATGACT+GGG + chr5_3:14444937-14444956 Msa0800840:CDS 35.0%
! AATACCGTTTTACCAAAGTG+GGG - chr5_3:14444980-14444999 None:intergenic 35.0%
GCATAACCAAACACACATTA+AGG - chr5_3:14445058-14445077 None:intergenic 35.0%
!! AAATTGAGTTGGATGTGAAG+TGG + chr5_3:14445130-14445149 Msa0800840:intron 35.0%
TATCATATAGCTAGCCACTA+TGG + chr5_3:14445325-14445344 Msa0800840:intron 35.0%
AAATAAAATCAAACCGTCGG+GGG + chr5_3:14445463-14445482 Msa0800840:intron 35.0%
! AACTGAACTAGTTTGAGCTA+AGG + chr5_3:14445503-14445522 Msa0800840:intron 35.0%
! ACTGAACTAGTTTGAGCTAA+GGG + chr5_3:14445504-14445523 Msa0800840:intron 35.0%
TAGTTTGAGCTAAGGGTTAA+AGG + chr5_3:14445511-14445530 Msa0800840:intron 35.0%
TGCAATTGGTGAGTTACAAA+GGG - chr5_3:14445738-14445757 None:intergenic 35.0%
TTGCAATTGGTGAGTTACAA+AGG - chr5_3:14445739-14445758 None:intergenic 35.0%
TTGTAACTCACCAATTGCAA+TGG + chr5_3:14445739-14445758 Msa0800840:intron 35.0%
AACAGCAACATAATCAGCAA+CGG - chr5_3:14445880-14445899 None:intergenic 35.0%
AAAGATGGAGCTGTTATACT+TGG + chr5_3:14445915-14445934 Msa0800840:CDS 35.0%
CTGTTATACTTGGATCCAAA+AGG + chr5_3:14445925-14445944 Msa0800840:CDS 35.0%
! TTCAAATACAGTGCTCCTTT+TGG - chr5_3:14445943-14445962 None:intergenic 35.0%
! TTTGAAGTGGATGCTAAAAC+AGG + chr5_3:14445957-14445976 Msa0800840:CDS 35.0%
! ATGTTTCTACTACTGCAATG+TGG + chr5_3:14446018-14446037 Msa0800840:CDS 35.0%
CAAGCTCCTTATTATTTGCA+CGG - chr5_3:14446082-14446101 None:intergenic 35.0%
TCTGGTAAATTAAGCTTTGC+TGG - chr5_3:14446110-14446129 None:intergenic 35.0%
! AGTTTTTGCTCCAGATAGTT+AGG + chr5_3:14446129-14446148 Msa0800840:CDS 35.0%
! TTTTTACAATCTGTGGGTTC+TGG + chr5_3:14446161-14446180 Msa0800840:CDS 35.0%
TATGTCAGTAGCTGAATTTG+AGG + chr5_3:14446205-14446224 Msa0800840:CDS 35.0%
TATGCTTATGATGTTGACAG+TGG + chr5_3:14446293-14446312 Msa0800840:CDS 35.0%
GTTGATGCTTATCAAGAGAA+AGG + chr5_3:14446425-14446444 Msa0800840:CDS 35.0%
!! TGGAAGCATCAGCTTTAAAT+CGG - chr5_3:14446465-14446484 None:intergenic 35.0%
ATATAATTTGGCACAGTCAC+AGG - chr5_3:14446542-14446561 None:intergenic 35.0%
! TCAAATCTGAGTCACTGATT+TGG - chr5_3:14446760-14446779 None:intergenic 35.0%
! AAAAAGAGAGTACGTAAGTC+AGG + chr5_3:14446797-14446816 Msa0800840:CDS 35.0%
TCATAAGGAAGCAGAAAATG+AGG + chr5_3:14446856-14446875 Msa0800840:CDS 35.0%
ATATATCCCTTCAAGGACAA+TGG - chr5_3:14446969-14446988 None:intergenic 35.0%
TTGAAGGGATATATGAAGGT+CGG + chr5_3:14446975-14446994 Msa0800840:CDS 35.0%
CCATACCATCGAACAATATT+TGG - chr5_3:14447085-14447104 None:intergenic 35.0%
CCAAATATTGTTCGATGGTA+TGG + chr5_3:14447082-14447101 Msa0800840:CDS 35.0%
!!! TCGGTTTTAAGTAAGGATCA+AGG + chr5_3:14447202-14447221 Msa0800840:CDS 35.0%
!! TTTTAAGAAGGCCCAAATAG+AGG + chr5_3:14447234-14447253 Msa0800840:CDS 35.0%
AGGATGATATGCAATGTCTT+TGG + chr5_3:14447263-14447282 Msa0800840:CDS 35.0%
! CAATGTCTTTGGAAATCGAA+TGG + chr5_3:14447274-14447293 Msa0800840:CDS 35.0%
ACTAGTGAGATACATCATGT+AGG + chr5_3:14447470-14447489 Msa0800840:intron 35.0%
TTTAGGCATTACCTTAGAGT+TGG + chr5_3:14447790-14447809 Msa0800840:intron 35.0%
ACACGGACAACATATAATTG+AGG + chr5_3:14447837-14447856 Msa0800840:intron 35.0%
GTTAGCAAAAGATCGAAGAA+TGG + chr5_3:14447872-14447891 Msa0800840:intron 35.0%
AATCCGATTGAATTGTTAGG+AGG + chr5_3:14447904-14447923 Msa0800840:intron 35.0%
TTGTTAGGAGGAATACACAA+AGG + chr5_3:14447916-14447935 Msa0800840:intron 35.0%
TGTTAGGAGGAATACACAAA+GGG + chr5_3:14447917-14447936 Msa0800840:intron 35.0%
TGAACTAGGAATAATACACC+GGG + chr5_3:14448141-14448160 Msa0800840:CDS 35.0%
ATGTGCCAAACTTTCTGATA+TGG + chr5_3:14448207-14448226 Msa0800840:CDS 35.0%
TGTGCCAAACTTTCTGATAT+GGG + chr5_3:14448208-14448227 Msa0800840:CDS 35.0%
AATCCCCATATCAGAAAGTT+TGG - chr5_3:14448215-14448234 None:intergenic 35.0%
CTTGAAGACATGTCTTCTTT+AGG + chr5_3:14448247-14448266 Msa0800840:CDS 35.0%
!! TAGTCGTTGACTTAGTTACT+TGG + chr5_3:14448352-14448371 Msa0800840:intron 35.0%
!! GACTTAGTTACTTGGTTTGT+CGG + chr5_3:14448360-14448379 Msa0800840:intron 35.0%
TAGCATATGGAATGTATGGT+TGG - chr5_3:14448510-14448529 None:intergenic 35.0%
GAATGACATACCTTAGATTG+GGG - chr5_3:14448871-14448890 None:intergenic 35.0%
GAGAATGACATACCTTAGAT+TGG - chr5_3:14448873-14448892 None:intergenic 35.0%
! TCTCGTTCAATGTGTTTTCT+AGG + chr5_3:14448889-14448908 Msa0800840:intron 35.0%
TAGCATAAAGCCATAAACGA+TGG + chr5_3:14448979-14448998 Msa0800840:intron 35.0%
TTGGGACCTGTTAGATATAT+AGG + chr5_3:14449262-14449281 Msa0800840:intron 35.0%
AGGCTTGTAGCATTTAATCA+AGG - chr5_3:14449363-14449382 None:intergenic 35.0%
TCAAGATAAGTATTCATGCG+AGG + chr5_3:14449423-14449442 Msa0800840:intron 35.0%
! TCATGCGAGGATATTCATTT+TGG + chr5_3:14449436-14449455 Msa0800840:intron 35.0%
!!! ACCTTTTTAGGATTCATCCA+TGG - chr5_3:14449472-14449491 None:intergenic 35.0%
ATGGATGAATCCTAAAAAGG+TGG + chr5_3:14449471-14449490 Msa0800840:intron 35.0%
ATGAATCCTAAAAAGGTGGA+AGG + chr5_3:14449475-14449494 Msa0800840:intron 35.0%
ATTGCAAGATAGTACTACTC+CGG + chr5_3:14449500-14449519 Msa0800840:intron 35.0%
TCATTTGTCTATCACATGCA+TGG + chr5_3:14449616-14449635 Msa0800840:intron 35.0%
AATCCATTTGCCAATTTCCT+GGG - chr5_3:14449683-14449702 None:intergenic 35.0%
TAATCCATTTGCCAATTTCC+TGG - chr5_3:14449684-14449703 None:intergenic 35.0%
AGATTTGTGTTTGTCTTGTC+TGG + chr5_3:14449810-14449829 Msa0800840:intron 35.0%
TCATTTAATTGTCAGGCCAA+AGG + chr5_3:14449866-14449885 Msa0800840:intron 35.0%
ATCTCAGAACTCCAAAATAG+AGG - chr5_3:14449912-14449931 None:intergenic 35.0%
CAAGAAGAAACCTGAATTTC+TGG - chr5_3:14450176-14450195 None:intergenic 35.0%
! CAGAAATTCAGGTTTCTTCT+TGG + chr5_3:14450174-14450193 Msa0800840:intron 35.0%
!!! TTCCTTTTTTATCTGGTCGA+AGG + chr5_3:14450221-14450240 Msa0800840:intron 35.0%
AACCTTCGACCAGATAAAAA+AGG - chr5_3:14450226-14450245 None:intergenic 35.0%
! TTTTTATCTGGTCGAAGGTT+AGG + chr5_3:14450226-14450245 Msa0800840:intron 35.0%
TTGAAATCCAGGTTTCTTCT+TGG + chr5_3:14450263-14450282 Msa0800840:intron 35.0%
ATCGAATAAGGATCATCTTC+AGG - chr5_3:14450366-14450385 None:intergenic 35.0%
! ATGATCCTTATTCGATTTGC+TGG + chr5_3:14450370-14450389 Msa0800840:intron 35.0%
TATCACCAGCAAATCGAATA+AGG - chr5_3:14450378-14450397 None:intergenic 35.0%
GCATGTCTATGATATGTTCT+TGG - chr5_3:14450445-14450464 None:intergenic 35.0%
!! TTCTTTCTTGCTGGTTTATC+AGG + chr5_3:14450477-14450496 Msa0800840:intron 35.0%
AAGTAGTCATTGAATCCTTC+CGG - chr5_3:14450520-14450539 None:intergenic 35.0%
TCAAGCCATCTATATGATCA+AGG - chr5_3:14450654-14450673 None:intergenic 35.0%
TTAGACTAATCAGTGGCAAA+TGG - chr5_3:14450751-14450770 None:intergenic 35.0%
AGTCTAACCCAAAGTTATGA+TGG + chr5_3:14450764-14450783 Msa0800840:three_prime_UTR 35.0%
TGGCATTCCATCATAACTTT+GGG - chr5_3:14450774-14450793 None:intergenic 35.0%
ATGGCATTCCATCATAACTT+TGG - chr5_3:14450775-14450794 None:intergenic 35.0%
TAGTTGAATCCTCTAAACAC+TGG - chr5_3:14450805-14450824 None:intergenic 35.0%
! TGTATTCCTCTTGGTGATAA+AGG + chr5_3:14450864-14450883 Msa0800840:three_prime_UTR 35.0%
TGGAACCACATTCCATTGTT+TGG - chr5_3:14444404-14444423 None:intergenic 40.0%
! TAAGGCTATGTTTGGATTGG+TGG - chr5_3:14444459-14444478 None:intergenic 40.0%
CCTTAAGGCTATGTTTGGAT+TGG - chr5_3:14444462-14444481 None:intergenic 40.0%
! CCAATCCAAACATAGCCTTA+AGG + chr5_3:14444459-14444478 Msa0800840:five_prime_UTR 40.0%
AAGAGAGAGTTGTTGGGATT+GGG - chr5_3:14444699-14444718 None:intergenic 40.0%
! GCCGTTAGTTTCGAATTCAT+TGG + chr5_3:14444769-14444788 Msa0800840:CDS 40.0%
ATCTTTCATGATCCCCACTT+TGG + chr5_3:14444965-14444984 Msa0800840:CDS 40.0%
TGATCCCCACTTTGGTAAAA+CGG + chr5_3:14444973-14444992 Msa0800840:CDS 40.0%
GATGTGAAGTGGTTTATGTC+TGG + chr5_3:14445141-14445160 Msa0800840:intron 40.0%
AATAAAATCAAACCGTCGGG+GGG + chr5_3:14445464-14445483 Msa0800840:intron 40.0%
!! TTTTGTCTCGGTTTGAACTC+AGG - chr5_3:14445547-14445566 None:intergenic 40.0%
TGAGTTCAAACCGAGACAAA+AGG + chr5_3:14445546-14445565 Msa0800840:intron 40.0%
GCAATTGGTGAGTTACAAAG+GGG - chr5_3:14445737-14445756 None:intergenic 40.0%
!! AAGGAGCACTGTATTTGAAG+TGG + chr5_3:14445944-14445963 Msa0800840:CDS 40.0%
CGACTTCCGTGCAAATAATA+AGG + chr5_3:14446073-14446092 Msa0800840:CDS 40.0%
! ACTATCTGGAGCAAAAACTC+TGG - chr5_3:14446128-14446147 None:intergenic 40.0%
CTGGTTCAGGAATAGTGTTA+TGG + chr5_3:14446180-14446199 Msa0800840:CDS 40.0%
TTATGATGTTGACAGTGGCT+TGG + chr5_3:14446298-14446317 Msa0800840:CDS 40.0%
! ACTTCTCTGAGTTTTCTGTC+AGG - chr5_3:14446347-14446366 None:intergenic 40.0%
!! TCAGCTTTAAATCGGGCATT+GGG - chr5_3:14446457-14446476 None:intergenic 40.0%
!! ATCAGCTTTAAATCGGGCAT+TGG - chr5_3:14446458-14446477 None:intergenic 40.0%
!! GGAAGCATCAGCTTTAAATC+GGG - chr5_3:14446464-14446483 None:intergenic 40.0%
! CTATCACTCTTAGGTTGTGA+TGG - chr5_3:14446485-14446504 None:intergenic 40.0%
GGGAGAAATCTATCACTCTT+AGG - chr5_3:14446494-14446513 None:intergenic 40.0%
AAGAGTGATAGATTTCTCCC+CGG + chr5_3:14446494-14446513 Msa0800840:CDS 40.0%
ATCATATTACCACCATGACC+GGG - chr5_3:14446515-14446534 None:intergenic 40.0%
CATCATATTACCACCATGAC+CGG - chr5_3:14446516-14446535 None:intergenic 40.0%
! AATGTTAATGGACGCAGGAT+CGG + chr5_3:14446896-14446915 Msa0800840:CDS 40.0%
GAAATCGCAAAGGGAAGTAA+TGG + chr5_3:14446941-14446960 Msa0800840:CDS 40.0%
GTCCTTGAAGGGATATATGA+AGG + chr5_3:14446971-14446990 Msa0800840:CDS 40.0%
GACCTTCATATATCCCTTCA+AGG - chr5_3:14446976-14446995 None:intergenic 40.0%
! AGTCAGAAGCAATGAGGTTT+TGG - chr5_3:14447057-14447076 None:intergenic 40.0%
GATGAAAGTCAGAAGCAATG+AGG - chr5_3:14447063-14447082 None:intergenic 40.0%
TATTGTTCGATGGTATGGTG+TGG + chr5_3:14447087-14447106 Msa0800840:CDS 40.0%
!! CGATTTTGTTTACCTTGCTC+TGG + chr5_3:14447120-14447139 Msa0800840:CDS 40.0%
ATCCTTCTGTGCCTCTATTT+GGG - chr5_3:14447248-14447267 None:intergenic 40.0%
TAGGAGCTTTGCTGCAATTA+AGG + chr5_3:14447658-14447677 Msa0800840:intron 40.0%
AACAAGGATGGGTGATAAAC+AGG + chr5_3:14447700-14447719 Msa0800840:intron 40.0%
ACAAGGATGGGTGATAAACA+GGG + chr5_3:14447701-14447720 Msa0800840:intron 40.0%
ACGAGGATGAGAAAGATACA+CGG + chr5_3:14447820-14447839 Msa0800840:intron 40.0%
CTTGTCCATTTGCATGAACT+AGG + chr5_3:14448127-14448146 Msa0800840:CDS 40.0%
!!! CATTTTGGGGTTTCAAATCC+CGG - chr5_3:14448162-14448181 None:intergenic 40.0%
GTGCCAAACTTTCTGATATG+GGG + chr5_3:14448209-14448228 Msa0800840:CDS 40.0%
! TCTTTAGGCCATAGTTCTAC+TGG + chr5_3:14448262-14448281 Msa0800840:CDS 40.0%
TGTACTCACCAGTAGAACTA+TGG - chr5_3:14448273-14448292 None:intergenic 40.0%
TCGAACTAATGAGTCTCTAG+TGG + chr5_3:14448390-14448409 Msa0800840:intron 40.0%
AATGACTTATTTGCAGGCTG+TGG + chr5_3:14448617-14448636 Msa0800840:intron 40.0%
CTGCTGTCATACAGAAAAAG+AGG - chr5_3:14448724-14448743 None:intergenic 40.0%
! CTCTTTTTCTGTATGACAGC+AGG + chr5_3:14448722-14448741 Msa0800840:CDS 40.0%
GAAATTAGATCCTCTGCTTC+AGG - chr5_3:14448830-14448849 None:intergenic 40.0%
ACAAGTCTCAGACACATATC+CGG - chr5_3:14449172-14449191 None:intergenic 40.0%
AAATGCTACAAGCCTACAAG+TGG + chr5_3:14449368-14449387 Msa0800840:intron 40.0%
GCCATGGATGAATCCTAAAA+AGG + chr5_3:14449468-14449487 Msa0800840:intron 40.0%
! CAATGTCCTTCCACCTTTTT+AGG - chr5_3:14449484-14449503 None:intergenic 40.0%
TATCACATGCATGGAACTGA+TGG + chr5_3:14449625-14449644 Msa0800840:intron 40.0%
ATGGAACTGATGGAAGGATA+GGG + chr5_3:14449635-14449654 Msa0800840:intron 40.0%
ATTCCCAGGAAATTGGCAAA+TGG + chr5_3:14449677-14449696 Msa0800840:intron 40.0%
CTCTTACTAATTGGAGGAAC+CGG + chr5_3:14449779-14449798 Msa0800840:intron 40.0%
GTTTGTCTTGTCTGGTTAGA+AGG + chr5_3:14449818-14449837 Msa0800840:intron 40.0%
TGCAATACTTCAATCGCCTT+TGG - chr5_3:14449885-14449904 None:intergenic 40.0%
!! ACTGGCTTTAGGTGCAAAAT+GGG + chr5_3:14450028-14450047 Msa0800840:CDS 40.0%
TGCAAAATGGGACGAAAAGA+TGG + chr5_3:14450040-14450059 Msa0800840:CDS 40.0%
! GAAGAAACCTGAATTTCTGG+AGG - chr5_3:14450173-14450192 None:intergenic 40.0%
CTGGTTTATCAGGAACTGAT+AGG + chr5_3:14450487-14450506 Msa0800840:intron 40.0%
! ACTTTGCAAGTCGATTTCCT+AGG + chr5_3:14450536-14450555 Msa0800840:CDS 40.0%
TACACTTCAATCAAGAGCCT+AGG - chr5_3:14450556-14450575 None:intergenic 40.0%
AGTTATCTGCAACTACTGCA+AGG + chr5_3:14450579-14450598 Msa0800840:CDS 40.0%
! CTTTGGGTTAGACTAATCAG+TGG - chr5_3:14450758-14450777 None:intergenic 40.0%
TAGTGGGATTGTATTCCTCT+TGG + chr5_3:14450855-14450874 Msa0800840:three_prime_UTR 40.0%
ACAGTTCCTTTATCACCAAG+AGG - chr5_3:14450873-14450892 None:intergenic 40.0%
ATCAGTTGCTATGTTAGAGG+TGG + chr5_3:14450953-14450972 Msa0800840:three_prime_UTR 40.0%
TGGAATGGAATGGGATGGAA+TGG - chr5_3:14444424-14444443 None:intergenic 45.0%
TGGAATGGAATGGAATGGGA+TGG - chr5_3:14444429-14444448 None:intergenic 45.0%
! GTGGTGGAATGGAATGGAAT+GGG - chr5_3:14444433-14444452 None:intergenic 45.0%
! AGTGGTGGAATGGAATGGAA+TGG - chr5_3:14444434-14444453 None:intergenic 45.0%
!! ATGTTTGGATTGGTGGTGAG+TGG - chr5_3:14444452-14444471 None:intergenic 45.0%
GAAGAGAGAGTTGTTGGGAT+TGG - chr5_3:14444700-14444719 None:intergenic 45.0%
GTGGAGAAGAGAGAGTTGTT+GGG - chr5_3:14444705-14444724 None:intergenic 45.0%
TGTGGAGAAGAGAGAGTTGT+TGG - chr5_3:14444706-14444725 None:intergenic 45.0%
CAACTCTCTCTTCTCCACAA+CGG + chr5_3:14444707-14444726 Msa0800840:CDS 45.0%
!! TAGTTGAAAGTGCTTCTGGG+AGG + chr5_3:14444843-14444862 Msa0800840:CDS 45.0%
!! AGTTGAAAGTGCTTCTGGGA+GGG + chr5_3:14444844-14444863 Msa0800840:CDS 45.0%
TTGGCAGAGGAATGGTAGAT+CGG - chr5_3:14444896-14444915 None:intergenic 45.0%
TCAATAAGACCAGAAGACGG+AGG - chr5_3:14444923-14444942 None:intergenic 45.0%
TGGATCAAATGACGCCATAG+TGG - chr5_3:14445342-14445361 None:intergenic 45.0%
ATAAAATCAAACCGTCGGGG+GGG + chr5_3:14445465-14445484 Msa0800840:intron 45.0%
GAGCTAAGGGTTAAAGGAGT+TGG + chr5_3:14445517-14445536 Msa0800840:intron 45.0%
CTCAACTCAGCCATTGCAAT+TGG - chr5_3:14445752-14445771 None:intergenic 45.0%
TTGAAACCTGCAGAGACTCA+AGG + chr5_3:14445851-14445870 Msa0800840:intron 45.0%
ACGCCTATTGTGTCGAAAGA+TGG + chr5_3:14445900-14445919 Msa0800840:CDS 45.0%
GCTCCATCTTTCGACACAAT+AGG - chr5_3:14445906-14445925 None:intergenic 45.0%
GGAAAGCTCCTTAGAAGCTA+TGG + chr5_3:14445978-14445997 Msa0800840:CDS 45.0%
TCTACTACTGCAATGTGGAG+TGG + chr5_3:14446023-14446042 Msa0800840:CDS 45.0%
TCAAGTGAAGCTGTCAAGGT+AGG - chr5_3:14446260-14446279 None:intergenic 45.0%
TGCATCAAGTGAAGCTGTCA+AGG - chr5_3:14446264-14446283 None:intergenic 45.0%
ACAGCTTCACTTGATGCAGA+AGG + chr5_3:14446266-14446285 Msa0800840:CDS 45.0%
TTTCTGTCAGGACACGCATA+CGG - chr5_3:14446335-14446354 None:intergenic 45.0%
TCATATTACCACCATGACCG+GGG - chr5_3:14446514-14446533 None:intergenic 45.0%
! AAGGGAAGTTGATCTGAGCA+GGG + chr5_3:14446637-14446656 Msa0800840:CDS 45.0%
AGGAAGCAGAAAATGAGGCA+CGG + chr5_3:14446861-14446880 Msa0800840:CDS 45.0%
AATGGCACCATTGTCCTTGA+AGG + chr5_3:14446959-14446978 Msa0800840:CDS 45.0%
ATGGCACCATTGTCCTTGAA+GGG + chr5_3:14446960-14446979 Msa0800840:CDS 45.0%
! TGCTGTCAAACGTCTTGTTC+AGG + chr5_3:14447003-14447022 Msa0800840:CDS 45.0%
CATCCTTCTGTGCCTCTATT+TGG - chr5_3:14447249-14447268 None:intergenic 45.0%
TTACAGTCCCATCAGTGAAC+AGG + chr5_3:14447501-14447520 Msa0800840:intron 45.0%
TACAGTCCCATCAGTGAACA+GGG + chr5_3:14447502-14447521 Msa0800840:intron 45.0%
TTGCTACCCTGTTCACTGAT+GGG - chr5_3:14447511-14447530 None:intergenic 45.0%
TCGTGGATTCTCCAACTCTA+AGG - chr5_3:14447804-14447823 None:intergenic 45.0%
TTAGAGTTGGAGAATCCACG+AGG + chr5_3:14447803-14447822 Msa0800840:intron 45.0%
GTGTATCTTTCTCATCCTCG+TGG - chr5_3:14447821-14447840 None:intergenic 45.0%
TTTGTCCACTAACAGGGATG+TGG + chr5_3:14448096-14448115 Msa0800840:intron 45.0%
AGAAACCACATCCCTGTTAG+TGG - chr5_3:14448104-14448123 None:intergenic 45.0%
ACTAACAGGGATGTGGTTTC+TGG + chr5_3:14448103-14448122 Msa0800840:intron 45.0%
CTAACAGGGATGTGGTTTCT+GGG + chr5_3:14448104-14448123 Msa0800840:intron 45.0%
ACAAATCTACAGCCCGTGTT+TGG - chr5_3:14448685-14448704 None:intergenic 45.0%
ACAGCAGGAAGACATCCATT+TGG + chr5_3:14448737-14448756 Msa0800840:CDS 45.0%
AGAGTTTCTTCCTGAAGCAG+AGG + chr5_3:14448817-14448836 Msa0800840:CDS 45.0%
TAAACCCTGACCCCAATCTA+AGG + chr5_3:14448858-14448877 Msa0800840:CDS 45.0%
CATACCTTAGATTGGGGTCA+GGG - chr5_3:14448865-14448884 None:intergenic 45.0%
ACATACCTTAGATTGGGGTC+AGG - chr5_3:14448866-14448885 None:intergenic 45.0%
GACTTAACACAGCCACTTGT+AGG - chr5_3:14449383-14449402 None:intergenic 45.0%
!!! ATTTTGGTGCTTTTGGGCCA+TGG + chr5_3:14449452-14449471 Msa0800840:intron 45.0%
GACAAATGAACTACTCCCTC+CGG - chr5_3:14449605-14449624 None:intergenic 45.0%
ACATGCATGGAACTGATGGA+AGG + chr5_3:14449629-14449648 Msa0800840:intron 45.0%
CATGGAACTGATGGAAGGAT+AGG + chr5_3:14449634-14449653 Msa0800840:intron 45.0%
AACTGATGGAAGGATAGGGT+GGG + chr5_3:14449639-14449658 Msa0800840:intron 45.0%
! CATTTTGCACCTAAAGCCAG+TGG - chr5_3:14450029-14450048 None:intergenic 45.0%
!! CACTGGCTTTAGGTGCAAAA+TGG + chr5_3:14450027-14450046 Msa0800840:CDS 45.0%
CCAATGTTGGCAATGAAAGC+TGG - chr5_3:14450068-14450087 None:intergenic 45.0%
CCAGCTTTCATTGCCAACAT+TGG + chr5_3:14450065-14450084 Msa0800840:CDS 45.0%
TTGCCAACATTGGTCGTTAC+AGG + chr5_3:14450075-14450094 Msa0800840:CDS 45.0%
TCATGACCCTCAACAAGTCT+CGG - chr5_3:14450121-14450140 None:intergenic 45.0%
GGAATTGCCTCCAGAAATTC+AGG + chr5_3:14450163-14450182 Msa0800840:CDS 45.0%
TCATTGAATCCTTCCGGAAC+AGG - chr5_3:14450514-14450533 None:intergenic 45.0%
AATCAGTGGCAAATGGCAAC+TGG - chr5_3:14450744-14450763 None:intergenic 45.0%
!! TTTAAAAAAAAAAAATATCT+AGG - chr5_3:14447384-14447403 None:intergenic 5.0%
! TGGTGAGTGGTGGAATGGAA+TGG - chr5_3:14444439-14444458 None:intergenic 50.0%
!! ATTGGTGGTGAGTGGTGGAA+TGG - chr5_3:14444444-14444463 None:intergenic 50.0%
!! TTTGGATTGGTGGTGAGTGG+TGG - chr5_3:14444449-14444468 None:intergenic 50.0%
GGATACATCTGCAACGATGC+AGG - chr5_3:14444666-14444685 None:intergenic 50.0%
AGTTGTTGGGATTGGGAGGT+GGG - chr5_3:14444692-14444711 None:intergenic 50.0%
AGAGAGTTGTTGGGATTGGG+AGG - chr5_3:14444696-14444715 None:intergenic 50.0%
TTCGAAACTAACGGCGACGA+TGG - chr5_3:14444764-14444783 None:intergenic 50.0%
CAGAAAACCTGTTACGGCAC+TGG + chr5_3:14444793-14444812 Msa0800840:CDS 50.0%
! AAAACCTGTTACGGCACTGG+TGG + chr5_3:14444796-14444815 Msa0800840:CDS 50.0%
! GTGCTTCTGGGAGGGTAATT+TGG + chr5_3:14444852-14444871 Msa0800840:CDS 50.0%
!! GAGGAGTATTGGCAGAGGAA+TGG - chr5_3:14444904-14444923 None:intergenic 50.0%
! ACCAGAAGACGGAGGAGTAT+TGG - chr5_3:14444915-14444934 None:intergenic 50.0%
! AAGCCTTATCCCACTGAGTG+GGG - chr5_3:14445374-14445393 None:intergenic 50.0%
! CAAGCCTTATCCCACTGAGT+GGG - chr5_3:14445375-14445394 None:intergenic 50.0%
GTGTTCGCTTAGCGTGTGTT+TGG - chr5_3:14445679-14445698 None:intergenic 50.0%
CAGCAGCACCATAGCTTCTA+AGG - chr5_3:14445989-14446008 None:intergenic 50.0%
TGCAATGTGGAGTGGTGACA+AGG + chr5_3:14446031-14446050 Msa0800840:CDS 50.0%
AGTGGTGACAAGGACAGTGA+GGG + chr5_3:14446041-14446060 Msa0800840:CDS 50.0%
!! CAATCTGTGGGTTCTGGTTC+AGG + chr5_3:14446167-14446186 Msa0800840:CDS 50.0%
GATAGATTTCTCCCCGGTCA+TGG + chr5_3:14446500-14446519 Msa0800840:CDS 50.0%
! CTTGGTGCAGTGATCTCCAT+GGG - chr5_3:14446620-14446639 None:intergenic 50.0%
CATGGAGATCACTGCACCAA+GGG + chr5_3:14446619-14446638 Msa0800840:CDS 50.0%
CTGCTCAGATCAACTTCCCT+TGG - chr5_3:14446638-14446657 None:intergenic 50.0%
! CAAGGGAAGTTGATCTGAGC+AGG + chr5_3:14446636-14446655 Msa0800840:CDS 50.0%
GTTGCTACCCTGTTCACTGA+TGG - chr5_3:14447512-14447531 None:intergenic 50.0%
ATTTGCAGGCTGTGGCAGTT+CGG + chr5_3:14448625-14448644 Msa0800840:intron 50.0%
TTCTTCAGGGACGCCAAACA+CGG + chr5_3:14448669-14448688 Msa0800840:CDS 50.0%
TTCAGAAACCTGGCCATCTC+CGG + chr5_3:14449150-14449169 Msa0800840:intron 50.0%
CTCAGACACATATCCGGAGA+TGG - chr5_3:14449166-14449185 None:intergenic 50.0%
CTGCTTTCTGCAGTGCATTC+AGG - chr5_3:14449295-14449314 None:intergenic 50.0%
GCACTGCAGAAAGCAGTTAC+TGG + chr5_3:14449299-14449318 Msa0800840:intron 50.0%
GAACTGATGGAAGGATAGGG+TGG + chr5_3:14449638-14449657 Msa0800840:intron 50.0%
!! ATTAGAGAGCACTGCTCCAC+TGG + chr5_3:14450010-14450029 Msa0800840:CDS 50.0%
TCGCCTGTAACGACCAATGT+TGG - chr5_3:14450081-14450100 None:intergenic 50.0%
TGTCGGTCCAAGAAGAAACC+TGG - chr5_3:14450273-14450292 None:intergenic 50.0%
GGAACTGATAGGACCTGTTC+CGG + chr5_3:14450498-14450517 Msa0800840:intron 50.0%
TGGCAAATGGCAACTGGTTG+AGG - chr5_3:14450738-14450757 None:intergenic 50.0%
GTTGTTGGGATTGGGAGGTG+GGG - chr5_3:14444691-14444710 None:intergenic 55.0%
GAGTTGTTGGGATTGGGAGG+TGG - chr5_3:14444693-14444712 None:intergenic 55.0%
GAGAGGGAGAGAAACCGTTG+TGG - chr5_3:14444724-14444743 None:intergenic 55.0%
GAAACTAACGGCGACGATGG+CGG - chr5_3:14444761-14444780 None:intergenic 55.0%
!! GCACTGGTGGCTGGTTTAGA+CGG + chr5_3:14444809-14444828 Msa0800840:CDS 55.0%
!! AGACGGAGGAGTATTGGCAG+AGG - chr5_3:14444909-14444928 None:intergenic 55.0%
GCCAATACTCCTCCGTCTTC+TGG + chr5_3:14444911-14444930 Msa0800840:CDS 55.0%
CTTATCCCACTGAGTGGGGT+CGG - chr5_3:14445370-14445389 None:intergenic 55.0%
! CCAAGCCTTATCCCACTGAG+TGG - chr5_3:14445376-14445395 None:intergenic 55.0%
CCACTCAGTGGGATAAGGCT+TGG + chr5_3:14445373-14445392 Msa0800840:intron 55.0%
CGGATTCCTTGAGTCTCTGC+AGG - chr5_3:14445860-14445879 None:intergenic 55.0%
GAGTGGTGACAAGGACAGTG+AGG + chr5_3:14446040-14446059 Msa0800840:CDS 55.0%
AGATTTCTCCCCGGTCATGG+TGG + chr5_3:14446503-14446522 Msa0800840:CDS 55.0%
! CCTTGGTGCAGTGATCTCCA+TGG - chr5_3:14446621-14446640 None:intergenic 55.0%
CCATGGAGATCACTGCACCA+AGG + chr5_3:14446618-14446637 Msa0800840:CDS 55.0%
ATGCACAACGCTCCAGAGCA+AGG - chr5_3:14447135-14447154 None:intergenic 55.0%
!! GGAGCGTTGTGCATGCAACT+TGG + chr5_3:14447141-14447160 Msa0800840:CDS 55.0%
! GGCCCAAATAGAGGCACAGA+AGG + chr5_3:14447243-14447262 Msa0800840:CDS 55.0%
TTTGCAGGCTGTGGCAGTTC+GGG + chr5_3:14448626-14448645 Msa0800840:intron 55.0%
TCTTCAGGGACGCCAAACAC+GGG + chr5_3:14448670-14448689 Msa0800840:CDS 55.0%
CGCTCAAGTCGCTCTCCAAA+TGG - chr5_3:14448755-14448774 None:intergenic 55.0%
ACACATATCCGGAGATGGCC+AGG - chr5_3:14449161-14449180 None:intergenic 55.0%
TCGCGACGTTAGTGACAGAG+TGG + chr5_3:14449947-14449966 Msa0800840:CDS 55.0%
!! AGCACTGCTCCACTGGCTTT+AGG + chr5_3:14450017-14450036 Msa0800840:CDS 55.0%
!! ACAGCGTCCGAGACTTGTTG+AGG + chr5_3:14450111-14450130 Msa0800840:CDS 55.0%
!! CAGCGTCCGAGACTTGTTGA+GGG + chr5_3:14450112-14450131 Msa0800840:CDS 55.0%
CTGATAGGACCTGTTCCGGA+AGG + chr5_3:14450502-14450521 Msa0800840:CDS 55.0%
TTGGGATTGGGAGGTGGGGA+TGG - chr5_3:14444687-14444706 None:intergenic 60.0%
ACTGAGTGGGGTCGGCTACA+TGG - chr5_3:14445362-14445381 None:intergenic 60.0%
ATGTAGCCGACCCCACTCAG+TGG + chr5_3:14445361-14445380 Msa0800840:intron 60.0%
TGTAGCCGACCCCACTCAGT+GGG + chr5_3:14445362-14445381 Msa0800840:intron 60.0%
CGACCCCACTCAGTGGGATA+AGG + chr5_3:14445368-14445387 Msa0800840:intron 60.0%
AAATCAAACCGTCGGGGGGG+AGG + chr5_3:14445468-14445487 Msa0800840:intron 60.0%
TATGCTTCCGCAGCCTCCCA+TGG + chr5_3:14446601-14446620 Msa0800840:CDS 60.0%
GTGATCTCCATGGGAGGCTG+CGG - chr5_3:14446611-14446630 None:intergenic 60.0%
GGTGCAGTGATCTCCATGGG+AGG - chr5_3:14446617-14446636 None:intergenic 60.0%
AGCGCCAGAGCAGCTTCTTC+AGG + chr5_3:14448655-14448674 Msa0800840:CDS 60.0%
GCGCCAGAGCAGCTTCTTCA+GGG + chr5_3:14448656-14448675 Msa0800840:CDS 60.0%
CGTCCCTGAAGAAGCTGCTC+TGG - chr5_3:14448662-14448681 None:intergenic 60.0%
GGTGGAAGAGCGGGAGGAGA+GGG - chr5_3:14444740-14444759 None:intergenic 65.0%
! GACGATGGCGGTGGAAGAGC+GGG - chr5_3:14444749-14444768 None:intergenic 65.0%
! CGACGATGGCGGTGGAAGAG+CGG - chr5_3:14444750-14444769 None:intergenic 65.0%
! ACTAACGGCGACGATGGCGG+TGG - chr5_3:14444758-14444777 None:intergenic 65.0%
CCAGCCACCAGTGCCGTAAC+AGG - chr5_3:14444803-14444822 None:intergenic 65.0%
!! CCTGTTACGGCACTGGTGGC+TGG + chr5_3:14444800-14444819 Msa0800840:CDS 65.0%
AAACCGTCGGGGGGGAGGTT+GGG + chr5_3:14445473-14445492 Msa0800840:intron 65.0%
CAGGCTGTGGCAGTTCGGGT+TGG + chr5_3:14448630-14448649 Msa0800840:intron 65.0%
CGGTGGAAGAGCGGGAGGAG+AGG - chr5_3:14444741-14444760 None:intergenic 70.0%
! GATGGCGGTGGAAGAGCGGG+AGG - chr5_3:14444746-14444765 None:intergenic 70.0%
CAAACCGTCGGGGGGGAGGT+TGG + chr5_3:14445472-14445491 Msa0800840:intron 70.0%
AACCGTCGGGGGGGAGGTTG+GGG + chr5_3:14445474-14445493 Msa0800840:intron 70.0%
AGCCCCAACCTCCCCCCCGA+CGG - chr5_3:14445479-14445498 None:intergenic 75.0%
TCGGGGGGGAGGTTGGGGCT+GGG + chr5_3:14445479-14445498 Msa0800840:intron 75.0%
! GTCGGGGGGGAGGTTGGGGC+TGG + chr5_3:14445478-14445497 Msa0800840:intron 80.0%
! CGGGGGGGAGGTTGGGGCTG+GGG + chr5_3:14445480-14445499 Msa0800840:intron 80.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 14444388 14450985 14444388 ID=Msa0800840;Name=Msa0800840
chr5_3 mRNA 14444388 14450985 14444388 ID=Msa0800840-mRNA-1;Parent=Msa0800840;Name=Msa0800840-mRNA-1;_AED=0.06;_eAED=0.06;_QI=139|1|1|1|1|1|6|343|933
chr5_3 exon 14444388 14444994 14444388 ID=Msa0800840-mRNA-1:exon:6059;Parent=Msa0800840-mRNA-1
chr5_3 exon 14445864 14447329 14445864 ID=Msa0800840-mRNA-1:exon:6060;Parent=Msa0800840-mRNA-1
chr5_3 exon 14448111 14448283 14448111 ID=Msa0800840-mRNA-1:exon:6061;Parent=Msa0800840-mRNA-1
chr5_3 exon 14448633 14448879 14448633 ID=Msa0800840-mRNA-1:exon:6062;Parent=Msa0800840-mRNA-1
chr5_3 exon 14449881 14450184 14449881 ID=Msa0800840-mRNA-1:exon:6063;Parent=Msa0800840-mRNA-1
chr5_3 exon 14450499 14450985 14450499 ID=Msa0800840-mRNA-1:exon:6064;Parent=Msa0800840-mRNA-1
chr5_3 five_prime_UTR 14444388 14444526 14444388 ID=Msa0800840-mRNA-1:five_prime_utr;Parent=Msa0800840-mRNA-1
chr5_3 CDS 14444527 14444994 14444527 ID=Msa0800840-mRNA-1:cds;Parent=Msa0800840-mRNA-1
chr5_3 CDS 14445864 14447329 14445864 ID=Msa0800840-mRNA-1:cds;Parent=Msa0800840-mRNA-1
chr5_3 CDS 14448111 14448283 14448111 ID=Msa0800840-mRNA-1:cds;Parent=Msa0800840-mRNA-1
chr5_3 CDS 14448633 14448879 14448633 ID=Msa0800840-mRNA-1:cds;Parent=Msa0800840-mRNA-1
chr5_3 CDS 14449881 14450184 14449881 ID=Msa0800840-mRNA-1:cds;Parent=Msa0800840-mRNA-1
chr5_3 CDS 14450499 14450642 14450499 ID=Msa0800840-mRNA-1:cds;Parent=Msa0800840-mRNA-1
chr5_3 three_prime_UTR 14450643 14450985 14450643 ID=Msa0800840-mRNA-1:three_prime_utr;Parent=Msa0800840-mRNA-1
Gene Sequence

>Msa0800840

ATGAAACACCAAAATCTTAAAAACCGAAAAACCAAAACCCATGAATTATGTCTTGATTCCATTTTCCACCAAACAAAACATAACAACATGAATCATTCCGTTTCAATCTTCATCTTCTTCATCATCTCAATCTTCACCTGCATCGTTGCAGATGTATCCATCCCCACCTCCCAATCCCAACAACTCTCTCTTCTCCACAACGGTTTCTCTCCCTCTCCTCCCGCTCTTCCACCGCCATCGTCGCCGTTAGTTTCGAATTCATTGGACAGAAAACCTGTTACGGCACTGGTGGCTGGTTTAGACGGAACTATTTATCTAGTTGAAAGTGCTTCTGGGAGGGTAATTTGGTCTTTTTCATCTGGTTCACCGATCTACCATTCCTCTGCCAATACTCCTCCGTCTTCTGGTCTTATTGAATGTGGTGATGACTGGGAATTAATCTTTCATGATCCCCACTTTGGTAAAACGAGACTCAAGGAATCCGTTGCTGATTATGTTGCTGTTACGCCTATTGTGTCGAAAGATGGAGCTGTTATACTTGGATCCAAAAGGAGCACTGTATTTGAAGTGGATGCTAAAACAGGAAAGCTCCTTAGAAGCTATGGTGCTGCTGATTTTCGTAATGTTTCTACTACTGCAATGTGGAGTGGTGACAAGGACAGTGAGGGTGTTACTAACGACTTCCGTGCAAATAATAAGGAGCTTGCTGATCCAGCAAAGCTTAATTTACCAGAGTTTTTGCTCCAGATAGTTAGGACTGATTATTTTTTACAATCTGTGGGTTCTGGTTCAGGAATAGTGTTATGGACTATGTCAGTAGCTGAATTTGAGGCTGTATTATTTTGCCAACATAATGAAAATCCTACCTTGACAGCTTCACTTGATGCAGAAGGTGAGTATGCTTATGATGTTGACAGTGGCTTGGATTTTGCTATGCCGTATGCGTGTCCTGACAGAAAACTCAGAGAAGTCTATCGCCAACGAAAGAATTTTCTGTTTGAACCTGATAAAATTCAAAGATTATCTGATGTTGATGCTTATCAAGAGAAAGGTATGCTCCCAATGCCCGATTTAAAGCTGATGCTTCCATCACAACCTAAGAGTGATAGATTTCTCCCCGGTCATGGTGGTAATATGATGCTACCTGTGACTGTGCCAAATTATATGCAGCCGAAAATCACCTATGATAGTAATGGTAATGCAGTTATGCTTCCGCAGCCTCCCATGGAGATCACTGCACCAAGGGAAGTTGATCTGAGCAGGGTGATTGAATTGTCAATGTCATTATTGGTTGTATTATCTGTGGTCTTTCTTTTGATGTTGTACCAAAATCGGTTAAAAAATAATGTTACATCGAAGGTCCAAATCAGTGACTCAGATTTGAAAAGTTCGCCTTCTAAAAAAAAGAGAGTACGTAAGTCAGGAAAAAACAACATCATTGTTGAGGAGAATATACGAATTCATAAGGAAGCAGAAAATGAGGCACGGTTGCACTATAATAATGTTAATGGACGCAGGATCGGTAAACTGTGTGTATTAAATAAAGAAATCGCAAAGGGAAGTAATGGCACCATTGTCCTTGAAGGGATATATGAAGGTCGGACAGTTGCTGTCAAACGTCTTGTTCAGGCTCATCATGACGTAGCTCATAAAGAAATCCAAAACCTCATTGCTTCTGACTTTCATCCAAATATTGTTCGATGGTATGGTGTGGAATATGATCACGATTTTGTTTACCTTGCTCTGGAGCGTTGTGCATGCAACTTGGATGATCTGATTACTTTTTATTCAGATTTGTCAGAAAACTCGGTTTTAAGTAAGGATCAAGGTTTTGATATTTTTAAGAAGGCCCAAATAGAGGCACAGAAGGATGATATGCAATGTCTTTGGAAATCGAATGGTTATCCATCTCCACTTTTACTAAAGTTGATGAGGGATGTGGTTTCTGGGCTTGTCCATTTGCATGAACTAGGAATAATACACCGGGATTTGAAACCCCAAAATGTTTTGTTAATCAAGGAAAGGTCATTATGTGCCAAACTTTCTGATATGGGGATTAGTAAACGACTTCTTGAAGACATGTCTTCTTTAGGCCATAGTTCTACTGGCTGTGGCAGTTCGGGTTGGCAAGCGCCAGAGCAGCTTCTTCAGGGACGCCAAACACGGGCTGTAGATTTGTTTAGTTTAGGTTGTGTCCTCTTTTTCTGTATGACAGCAGGAAGACATCCATTTGGAGAGCGACTTGAGCGTGATGTCAACATTGTTAAAAATAAAAAAGATCTTTTCTTAGTAGAGTTTCTTCCTGAAGCAGAGGATCTAATTTCTTGTTTATTAAACCCTGACCCCAATCTAAGGCCAAAGGCGATTGAAGTATTGCATCATCCTCTATTTTGGAGTTCTGAGATGAGACTTTCATTTCTTCGCGACGTTAGTGACAGAGTGGAACTTGAAGATAGAGAGACTAATTCTGTTCTTTTGAATGTATTAGAGAGCACTGCTCCACTGGCTTTAGGTGCAAAATGGGACGAAAAGATGGAACCAGCTTTCATTGCCAACATTGGTCGTTACAGGCGATATAAATTTGACAGCGTCCGAGACTTGTTGAGGGTCATGAGAAACAAGCTAAATCATTTTAGGGAATTGCCTCCAGAAATTCAGGAACTGATAGGACCTGTTCCGGAAGGATTCAATGACTACTTTGCAAGTCGATTTCCTAGGCTCTTGATTGAAGTGTACAAAGTTATCTGCAACTACTGCAAGGATGATGAATGTTTTCAAAGATATTTTAGAGACATTGATTAA
Protein sequence

>Msa0800840

MKHQNLKNRKTKTHELCLDSIFHQTKHNNMNHSVSIFIFFIISIFTCIVADVSIPTSQSQQLSLLHNGFSPSPPALPPPSSPLVSNSLDRKPVTALVAGLDGTIYLVESASGRVIWSFSSGSPIYHSSANTPPSSGLIECGDDWELIFHDPHFGKTRLKESVADYVAVTPIVSKDGAVILGSKRSTVFEVDAKTGKLLRSYGAADFRNVSTTAMWSGDKDSEGVTNDFRANNKELADPAKLNLPEFLLQIVRTDYFLQSVGSGSGIVLWTMSVAEFEAVLFCQHNENPTLTASLDAEGEYAYDVDSGLDFAMPYACPDRKLREVYRQRKNFLFEPDKIQRLSDVDAYQEKGMLPMPDLKLMLPSQPKSDRFLPGHGGNMMLPVTVPNYMQPKITYDSNGNAVMLPQPPMEITAPREVDLSRVIELSMSLLVVLSVVFLLMLYQNRLKNNVTSKVQISDSDLKSSPSKKKRVRKSGKNNIIVEENIRIHKEAENEARLHYNNVNGRRIGKLCVLNKEIAKGSNGTIVLEGIYEGRTVAVKRLVQAHHDVAHKEIQNLIASDFHPNIVRWYGVEYDHDFVYLALERCACNLDDLITFYSDLSENSVLSKDQGFDIFKKAQIEAQKDDMQCLWKSNGYPSPLLLKLMRDVVSGLVHLHELGIIHRDLKPQNVLLIKERSLCAKLSDMGISKRLLEDMSSLGHSSTGCGSSGWQAPEQLLQGRQTRAVDLFSLGCVLFFCMTAGRHPFGERLERDVNIVKNKKDLFLVEFLPEAEDLISCLLNPDPNLRPKAIEVLHHPLFWSSEMRLSFLRDVSDRVELEDRETNSVLLNVLESTAPLALGAKWDEKMEPAFIANIGRYRRYKFDSVRDLLRVMRNKLNHFRELPPEIQELIGPVPEGFNDYFASRFPRLLIEVYKVICNYCKDDECFQRYFRDID*