AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0804390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0804390 MtrunA17_Chr3g0077801 87.216 352 45 0 182 533 1 352 0.0 642
Msa0804390 MtrunA17_Chr4g0075971 60.448 536 190 7 2 530 79 599 0.0 587
Msa0804390 MtrunA17_Chr4g0075971 40.523 153 81 3 29 181 25 167 3.43e-23 103
Msa0804390 MtrunA17_Chr3g0077901 72.934 351 95 0 178 528 17 367 0.0 540
Msa0804390 MtrunA17_Chr3g0077851 77.039 331 76 0 198 528 1 331 0.0 530
Msa0804390 MtrunA17_Chr6g0488101 51.885 451 189 9 105 533 11 455 7.43e-153 445
Msa0804390 MtrunA17_Chr6g0488271 51.905 420 182 7 129 533 1 415 1.26e-143 420
Msa0804390 MtrunA17_Chr3g0112311 58.611 360 132 4 182 530 1 354 2.62e-136 399
Msa0804390 MtrunA17_Chr7g0252101 53.103 435 180 10 105 533 16 432 3.09e-136 401
Msa0804390 MtrunA17_Chr7g0243331 58.092 346 141 4 189 533 8 350 1.18e-127 376
Msa0804390 MtrunA17_Chr3g0093911 56.180 356 146 5 182 533 1 350 7.07e-127 374
Msa0804390 MtrunA17_Chr1g0207351 55.587 358 142 6 186 533 16 366 1.07e-121 362
Msa0804390 MtrunA17_Chr3g0077941 97.143 175 5 0 5 179 1 175 3.77e-119 348
Msa0804390 MtrunA17_Chr6g0452641 57.742 310 119 3 233 533 34 340 2.60e-106 322
Msa0804390 MtrunA17_Chr3g0077881 89.205 176 18 1 5 179 1 176 4.99e-105 312
Msa0804390 MtrunA17_Chr1g0209051 58.889 270 103 3 267 532 5 270 1.33e-98 299
Msa0804390 MtrunA17_Chr3g0077891 89.205 176 18 1 5 179 1 176 1.93e-97 293
Msa0804390 MtrunA17_Chr3g0122991 48.287 321 106 4 187 497 5 275 8.20e-95 290
Msa0804390 MtrunA17_Chr4g0075861 54.785 303 127 5 2 302 79 373 1.04e-86 272
Msa0804390 MtrunA17_Chr4g0075861 41.830 153 79 3 29 181 25 167 3.14e-25 107
Msa0804390 MtrunA17_Chr3g0123471 55.894 263 110 4 264 525 2 259 3.60e-85 264
Msa0804390 MtrunA17_Chr3g0077861 62.286 175 58 2 5 179 1 167 1.30e-60 197
Msa0804390 MtrunA17_Chr7g0243391 51.869 214 101 1 178 391 14 225 2.20e-59 196
Msa0804390 MtrunA17_Chr3g0077911 63.415 164 52 2 5 168 1 156 6.39e-59 192
Msa0804390 MtrunA17_Chr3g0077911 46.250 80 39 1 102 181 8 83 5.20e-12 64.3
Msa0804390 MtrunA17_Chr1g0202841 54.023 174 76 2 363 533 7 179 5.67e-55 182
Msa0804390 MtrunA17_Chr6g0486591 50.943 159 69 2 384 533 1 159 1.53e-44 154
Msa0804390 MtrunA17_Chr1g0196231 41.810 232 106 7 101 324 156 366 2.04e-42 155
Msa0804390 MtrunA17_Chr3g0077811 76.768 99 23 0 2 100 3 101 2.32e-38 136
Msa0804390 MtrunA17_Chr3g0077811 40.179 112 37 1 98 179 9 120 7.08e-14 68.6
Msa0804390 MtrunA17_Chr1g0206951 58.407 113 46 1 185 296 2 114 2.55e-36 131
Msa0804390 MtrunA17_Chr1g0187941 52.593 135 61 1 357 488 1 135 2.93e-36 131
Msa0804390 MtrunA17_Chr1g0205821 45.679 162 83 4 10 171 11 167 1.29e-31 120
Msa0804390 MtrunA17_Chr1g0209191 56.122 98 39 1 439 532 1 98 4.12e-29 110
Msa0804390 MtrunA17_Chr1g0206771 42.767 159 79 2 13 171 17 163 2.55e-28 111
Msa0804390 MtrunA17_Chr1g0206771 49.275 69 34 1 12 80 95 162 5.74e-11 61.6
Msa0804390 MtrunA17_Chr6g0459061 27.243 301 211 6 190 488 18 312 6.80e-27 112
Msa0804390 MtrunA17_Chr8g0364231 43.750 160 85 3 6 165 36 190 7.12e-26 112
Msa0804390 MtrunA17_Chr8g0364231 38.235 136 65 2 95 230 35 151 9.10e-19 90.5
Msa0804390 MtrunA17_Chr7g0238781 42.105 133 75 2 214 346 27 157 9.06e-26 103
Msa0804390 MtrunA17_Chr1g0196241 68.056 72 22 1 430 500 3 74 5.25e-25 99.0
Msa0804390 MtrunA17_Chr1g0205831 38.462 169 81 5 27 195 16 161 6.97e-24 98.6
Msa0804390 MtrunA17_Chr6g0452021 39.752 161 88 4 6 165 37 189 9.34e-22 98.2
Msa0804390 MtrunA17_Chr6g0452021 34.586 133 66 3 98 230 39 150 5.33e-13 71.2
Msa0804390 MtrunA17_Chr7g0218891 35.542 166 100 3 12 175 99 259 1.73e-21 94.4
Msa0804390 MtrunA17_Chr7g0218891 35.870 184 107 4 6 183 7 185 3.53e-20 90.5
Msa0804390 MtrunA17_Chr7g0218891 42.857 77 43 1 12 87 185 261 3.93e-12 67.0
Msa0804390 MtrunA17_Chr5g0415031 39.130 161 93 3 6 166 37 192 2.72e-21 98.6
Msa0804390 MtrunA17_Chr5g0415031 54.054 74 33 1 98 171 39 111 4.37e-16 82.0
Msa0804390 MtrunA17_Chr6g0452001 39.752 161 90 4 6 165 57 211 7.07e-21 97.1
Msa0804390 MtrunA17_Chr6g0452001 48.649 74 37 1 98 171 59 131 1.08e-13 74.3
Msa0804390 MtrunA17_Chr1g0205811 47.664 107 43 2 9 102 9 115 1.08e-20 87.8
Msa0804390 MtrunA17_Chr1g0205811 43.750 80 44 1 102 181 14 92 1.25e-11 62.0
Msa0804390 MtrunA17_Chr1g0209061 42.975 121 45 5 102 221 10 107 1.73e-19 84.0
Msa0804390 MtrunA17_Chr1g0205801 50.538 93 41 2 10 102 10 97 5.94e-18 79.7
Msa0804390 MtrunA17_Chr1g0209201 37.762 143 74 3 11 153 15 142 8.09e-17 77.4
Msa0804390 MtrunA17_Chr1g0209201 41.250 80 45 1 102 181 16 93 3.02e-12 64.3
Msa0804390 MtrunA17_Chr1g0206781 39.850 133 49 3 6 138 5 106 1.52e-15 73.2
Msa0804390 MtrunA17_Chr1g0206781 49.398 83 41 1 98 180 7 88 1.81e-15 72.8
Msa0804390 MtrunA17_Chr8g0364021 51.948 77 36 1 6 82 38 113 1.04e-14 73.9
Msa0804390 MtrunA17_Chr8g0364021 42.857 98 53 2 95 192 37 131 3.10e-14 72.4
Msa0804390 MtrunA17_Chr1g0205861 36.752 117 73 1 88 204 2 117 2.28e-13 67.0
Msa0804390 MtrunA17_Chr1g0205861 38.636 88 53 1 5 92 9 95 9.53e-11 59.3
Msa0804390 MtrunA17_Chr2g0328701 40.426 94 47 1 29 122 42 126 1.29e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0804390 AT3G01320.1 41.875 160 87 3 6 165 51 204 1.03e-22 103
Msa0804390 AT3G01320.1 50.000 74 36 1 98 171 53 125 2.81e-14 76.6
Msa0804390 AT3G01320.2 41.875 160 87 3 6 165 51 204 1.17e-22 103
Msa0804390 AT3G01320.2 50.000 74 36 1 98 171 53 125 3.16e-14 76.6
Msa0804390 AT1G70030.1 38.889 162 88 4 6 165 5 157 7.48e-22 92.8
Msa0804390 AT1G70060.2 39.375 160 93 3 6 165 8 163 3.80e-21 98.6
Msa0804390 AT1G70060.2 49.351 77 38 1 95 171 7 82 2.34e-14 77.0
Msa0804390 AT1G70060.1 39.375 160 93 3 6 165 8 163 3.80e-21 98.6
Msa0804390 AT1G70060.1 49.351 77 38 1 95 171 7 82 2.34e-14 77.0
Msa0804390 AT5G15020.1 36.723 177 105 3 6 182 46 215 1.63e-20 96.3
Msa0804390 AT5G15020.2 36.723 177 105 3 6 182 46 215 1.73e-20 96.3
Msa0804390 AT1G24190.2 36.875 160 96 3 6 165 8 162 1.85e-20 96.3
Msa0804390 AT1G24190.2 43.182 88 42 2 95 175 7 93 9.12e-14 75.1
Msa0804390 AT1G24190.3 36.875 160 96 3 6 165 8 162 1.88e-20 96.3
Msa0804390 AT1G24190.3 43.182 88 42 2 95 175 7 93 9.06e-14 75.1
Msa0804390 AT1G24190.1 36.875 160 96 3 6 165 8 162 1.98e-20 96.3
Msa0804390 AT1G24190.1 43.182 88 42 2 95 175 7 93 9.05e-14 75.1
Msa0804390 AT1G24230.1 32.941 170 93 3 9 177 11 160 2.12e-19 88.2
Msa0804390 AT1G24230.1 29.333 150 98 2 12 161 86 227 8.17e-12 65.9
Msa0804390 AT1G10450.3 37.576 165 94 4 12 175 84 240 1.07e-18 90.5
Msa0804390 AT1G10450.3 44.444 90 42 2 100 182 82 170 1.05e-13 74.7
Msa0804390 AT1G10450.2 37.576 165 94 4 12 175 33 189 1.31e-18 90.5
Msa0804390 AT1G10450.2 44.444 90 42 2 100 182 31 119 1.02e-13 74.7
Msa0804390 AT1G10450.1 37.576 165 94 4 12 175 33 189 1.31e-18 90.5
Msa0804390 AT1G10450.1 44.444 90 42 2 100 182 31 119 1.02e-13 74.7
Msa0804390 AT1G24250.1 30.667 150 87 2 31 164 33 181 1.04e-17 83.6
Msa0804390 AT1G24200.1 35.220 159 95 3 7 165 9 159 2.57e-17 80.9
Msa0804390 AT1G24200.1 45.455 99 43 3 95 185 7 102 4.66e-14 71.6
Msa0804390 AT1G59890.1 37.013 154 90 3 12 165 45 191 5.87e-17 85.1
Msa0804390 AT1G59890.1 54.286 70 31 1 102 171 45 113 6.59e-15 78.6
Msa0804390 AT1G59890.2 37.013 154 90 3 12 165 45 191 5.88e-17 85.1
Msa0804390 AT1G59890.2 54.286 70 31 1 102 171 45 113 6.72e-15 78.6
Msa0804390 AT1G59890.3 37.013 154 90 3 12 165 45 191 6.28e-17 85.1
Msa0804390 AT1G59890.3 54.286 70 31 1 102 171 45 113 6.64e-15 78.6
Msa0804390 AT1G59890.4 37.013 154 90 3 12 165 45 191 6.61e-17 85.1
Msa0804390 AT1G59890.4 54.286 70 31 1 102 171 45 113 7.42e-15 78.6
Msa0804390 AT5G15025.1 55.405 74 32 1 98 171 43 115 1.37e-16 76.6
Msa0804390 AT5G15025.1 47.059 85 39 2 8 92 43 121 9.72e-12 62.8
Msa0804390 AT1G23810.1 29.814 161 107 2 9 164 11 170 5.65e-15 75.1
Msa0804390 AT1G70030.3 42.609 115 55 4 6 118 16 121 7.78e-15 71.6
Msa0804390 AT1G70030.2 35.802 162 61 5 6 165 16 136 1.08e-14 71.6
Msa0804390 AT1G27260.1 32.680 153 100 3 13 164 4 154 7.26e-14 71.6
Msa0804390 AT1G27220.1 43.750 80 44 1 102 181 14 92 4.45e-13 68.2
Msa0804390 AT4G12020.2 45.570 79 39 2 95 171 299 375 3.77e-11 66.6
Msa0804390 AT4G12020.11 45.946 74 38 1 98 171 304 375 3.78e-11 66.6
Msa0804390 AT4G12020.3 45.570 79 39 2 95 171 299 375 3.89e-11 66.6
Msa0804390 AT4G12020.6 45.570 79 39 2 95 171 299 375 3.95e-11 66.6
Msa0804390 AT4G12020.8 45.570 79 39 2 95 171 299 375 3.95e-11 66.6
Msa0804390 AT4G12020.10 45.570 79 39 2 95 171 299 375 3.96e-11 66.6
Msa0804390 AT4G12020.4 45.570 79 39 2 95 171 299 375 3.96e-11 66.6
Msa0804390 AT4G12020.1 45.570 79 39 2 95 171 299 375 3.97e-11 66.6
Msa0804390 AT4G12020.9 45.570 79 39 2 95 171 299 375 3.97e-11 66.6
Msa0804390 AT1G27250.1 47.692 65 33 1 102 166 21 84 4.15e-11 61.2
Msa0804390 AT4G12020.5 45.570 79 39 2 95 171 232 308 4.18e-11 66.6
Msa0804390 AT4G12020.7 45.570 79 39 2 95 171 299 375 4.25e-11 66.6

Find 104 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGGCATACGGATTTAATTT+TGG 0.145300 5_3:+20255781 Msa0804390:CDS
ACCTTCTTTCTTCTTGTAAA+TGG 0.145840 5_3:-20257366 None:intergenic
TGTCTATCAGTCTGGAAATT+TGG 0.158326 5_3:+20257512 Msa0804390:CDS
TTCTGGCACGTTGCTTATTC+TGG 0.158749 5_3:+20257285 Msa0804390:CDS
GGGAATTTCATAAAACTTAT+TGG 0.162427 5_3:+20257142 Msa0804390:CDS
ATAAGAAGAATTGACTTTAA+AGG 0.192960 5_3:-20257403 None:intergenic
CTATCATGCTTAATGTATTT+TGG 0.196702 5_3:-20257975 None:intergenic
TTTGAATAAGTAATGGTTCT+TGG 0.234598 5_3:-20257182 None:intergenic
TACCATGTCTTGCTTGCTTT+TGG 0.255664 5_3:+20257432 Msa0804390:CDS
AAGATGGTTGTAAAATTTCT+TGG 0.292218 5_3:+20257043 Msa0804390:CDS
TTCCATCTTGACAAAATTCA+TGG 0.296900 5_3:-20257799 None:intergenic
ATTTCGAAATTAAATCTTCA+TGG 0.307910 5_3:-20255514 None:intergenic
ACAACATGTAAAGTGTGTTT+AGG 0.310726 5_3:+20257936 Msa0804390:CDS
GTCTATCAGTCTGGAAATTT+GGG 0.319305 5_3:+20257513 Msa0804390:CDS
CTTTCAAAACCCCACCTTCT+CGG 0.331626 5_3:-20257882 None:intergenic
CAACATGTAAAGTGTGTTTA+GGG 0.332853 5_3:+20257937 Msa0804390:CDS
GTCGCTTCATGTAAAAGTTC+TGG 0.337852 5_3:+20257480 Msa0804390:CDS
GGTGTGATTCGATATTTCTT+TGG 0.344227 5_3:-20255821 None:intergenic
AAAGGAAAACGCCTACTTGC+TGG 0.351938 5_3:+20258013 Msa0804390:CDS
ATCAGTCTGGAAATTTGGGC+TGG 0.359141 5_3:+20257517 Msa0804390:CDS
CCAAGGCGATCAATCAATTC+TGG 0.360139 5_3:+20257268 Msa0804390:CDS
ACAAATTATGAAGGATTTCA+AGG 0.367445 5_3:+20255436 Msa0804390:CDS
GTAGGTTTGGATTTGAGAAA+AGG 0.371809 5_3:+20255393 Msa0804390:CDS
ATTAAGAGTGTACGAGTTGT+TGG 0.382597 5_3:+20255487 Msa0804390:CDS
TAACCGGTGTCAAGCTGAAC+TGG 0.385684 5_3:-20255845 None:intergenic
TACACCTATGTTGGCCTTGT+CGG 0.389440 5_3:-20257616 None:intergenic
AGATGGTTGTAAAATTTCTT+GGG 0.404155 5_3:+20257044 Msa0804390:CDS
TGAGAGCTTCTTCATCTTGA+AGG 0.407470 5_3:-20255333 None:intergenic
GCAGCAGTTAAACGTAGGTT+TGG 0.408891 5_3:+20255380 Msa0804390:CDS
TTTCAAAACCCCACCTTCTC+GGG 0.416348 5_3:-20257881 None:intergenic
CAATAACCAGATTACTCAAC+TGG 0.422972 5_3:-20258077 None:intergenic
GATGACCTCTTTCAATTCGC+TGG 0.428564 5_3:+20257102 Msa0804390:CDS
AAAGTAAAAGATGTGTTTCA+TGG 0.431621 5_3:+20255653 Msa0804390:CDS
TAGGTTTGGATTTGAGAAAA+GGG 0.438311 5_3:+20255394 Msa0804390:CDS
TAAACACACTTTACATGTTG+TGG 0.439177 5_3:-20257934 None:intergenic
AGCGGATATTTGATCATGAC+AGG 0.440460 5_3:+20257315 Msa0804390:CDS
ATTGTTAAGGATTTCAAGGC+TGG 0.451018 5_3:+20255710 Msa0804390:CDS
GTCATCGAAATCTAGATCTC+TGG 0.451722 5_3:-20257085 None:intergenic
TCGATATTTCTTTGGCAAGA+AGG 0.460534 5_3:-20255813 None:intergenic
TCGCTGGTGTGTGCAAGAAT+TGG 0.467150 5_3:+20257118 Msa0804390:CDS
TTTGTCAAGATGGAAACTTT+GGG 0.468280 5_3:+20257807 Msa0804390:CDS
AGGAAAAGGATTTCTTATCA+TGG 0.468556 5_3:-20257212 None:intergenic
AGTTTGTATGTCTATCAGTC+TGG 0.474620 5_3:+20257504 Msa0804390:CDS
AAAACGCCTACTTGCTGGAT+TGG 0.477038 5_3:+20258018 Msa0804390:CDS
GGAAAAGGATTTCTTATCAT+GGG 0.491468 5_3:-20257211 None:intergenic
CTCAGGATGGTTAGTTGTGA+TGG 0.492017 5_3:+20257711 Msa0804390:CDS
ATATGAAATCAAACTTCCAT+TGG 0.495726 5_3:+20255559 Msa0804390:CDS
TCCATTTACAAGAAGAAAGA+AGG 0.500617 5_3:+20257365 Msa0804390:CDS
TCGGTCAGCTATGCTGATGA+AGG 0.509137 5_3:-20257232 None:intergenic
TCATCGTCGTCACGATCCAA+TGG 0.515446 5_3:-20255575 None:intergenic
AGAGGGAATGATCTGCTTCA+AGG 0.517258 5_3:+20255761 Msa0804390:CDS
TCAGTCTGGAAATTTGGGCT+GGG 0.521625 5_3:+20257518 Msa0804390:CDS
GAGAGCTTCTTCATCTTGAA+GGG 0.526319 5_3:-20255332 None:intergenic
CCAGAATTGATTGATCGCCT+TGG 0.527310 5_3:-20257268 None:intergenic
GTAAACATTCAATATTTCCT+CGG 0.528220 5_3:-20257760 None:intergenic
AGCTATGCTGATGAAGGAAA+AGG 0.531287 5_3:-20257226 None:intergenic
GGCTGAAAGAATTGATGCTA+GGG 0.533185 5_3:+20255457 Msa0804390:CDS
ACAAAGTCAACAACCTTCCA+TGG 0.536142 5_3:-20257564 None:intergenic
TAACATCTACCTCACTCCTC+AGG 0.540088 5_3:+20257694 Msa0804390:CDS
AGGCTGAAAGAATTGATGCT+AGG 0.540112 5_3:+20255456 Msa0804390:CDS
GAGGGAATGATCTGCTTCAA+GGG 0.542159 5_3:+20255762 Msa0804390:CDS
TGTTGTGGATGAAAGATTGA+TGG 0.544678 5_3:-20257919 None:intergenic
AGTTTGATTTCATATTCAGT+TGG 0.545841 5_3:-20255551 None:intergenic
AGTGATTCATATTGCTTCCG+AGG 0.546777 5_3:+20257743 Msa0804390:CDS
CAAGTCAAGTACACCTATGT+TGG 0.548742 5_3:-20257625 None:intergenic
ATTCAACAATGGAAAGTCCA+TGG 0.553899 5_3:+20257547 Msa0804390:CDS
TGATCTGCTTCAAGGGCATA+CGG 0.554583 5_3:+20255769 Msa0804390:CDS
ATAAGTGTTGCTGCGGCAAG+AGG 0.559399 5_3:+20255743 Msa0804390:CDS
GCTTATTCTGGCTGTTCTAG+CGG 0.565805 5_3:+20257297 Msa0804390:CDS
CATTGAGCAACCCGAGAAGG+TGG 0.569290 5_3:+20257871 Msa0804390:CDS
TGTGTTTCATGGTAAGAATG+AGG 0.572647 5_3:+20255664 Msa0804390:CDS
AACAATGGAAAGTCCATGGA+AGG 0.572932 5_3:+20257551 Msa0804390:CDS
AAGATGAAGAAGCTCTCAGT+TGG 0.573928 5_3:+20255338 Msa0804390:CDS
ACACACCAGCGAATTGAAAG+AGG 0.578254 5_3:-20257107 None:intergenic
AGTGAGGTAGATGTTACATC+GGG 0.579813 5_3:-20257687 None:intergenic
ATGCATTGAGCAACCCGAGA+AGG 0.585187 5_3:+20257868 Msa0804390:CDS
GACGATGATGACGAACTACA+AGG 0.589561 5_3:+20255590 Msa0804390:CDS
GCAATGAATAACATACAAGA+TGG 0.590425 5_3:+20257027 Msa0804390:CDS
CTTTAGACATCTACACTATG+AGG 0.594856 5_3:+20258043 Msa0804390:CDS
CTGGTGTGTGCAAGAATTGG+AGG 0.595567 5_3:+20257121 Msa0804390:CDS
TAAGTGTTGCTGCGGCAAGA+GGG 0.604842 5_3:+20255744 Msa0804390:CDS
TGCCAAAAGCAAGCAAGACA+TGG 0.610086 5_3:-20257434 None:intergenic
GAGTGAGGTAGATGTTACAT+CGG 0.616275 5_3:-20257688 None:intergenic
ATTGAGCAACCCGAGAAGGT+GGG 0.616952 5_3:+20257872 Msa0804390:CDS
CCGAAAAGTTTATCACTCCA+AGG 0.620313 5_3:+20257251 Msa0804390:CDS
AAAGCACCAATCCAGCAAGT+AGG 0.620337 5_3:-20258024 None:intergenic
TTGAGCAACCCGAGAAGGTG+GGG 0.622323 5_3:+20257873 Msa0804390:CDS
CTGGGTTACATATTCAACAA+TGG 0.624667 5_3:+20257536 Msa0804390:CDS
AGAGTGTACGAGTTGTTGGA+CGG 0.625456 5_3:+20255491 Msa0804390:CDS
CCTCCAGTTCAGCTTGACAC+CGG 0.627356 5_3:+20255842 Msa0804390:CDS
GTCACCGACAAGGCCAACAT+AGG 0.627828 5_3:+20257612 Msa0804390:CDS
ATCTACCTCACTCCTCAGGA+TGG 0.644112 5_3:+20257698 Msa0804390:CDS
AATTGATATAAGTGTTGCTG+CGG 0.644511 5_3:+20255736 Msa0804390:CDS
TAGAACTCGAGTTCCTCCAA+AGG 0.651017 5_3:+20257995 Msa0804390:CDS
TAGACATCTACACTATGAGG+TGG 0.658182 5_3:+20258046 Msa0804390:CDS
TATATACGTTGTCACCGACA+AGG 0.661708 5_3:+20257602 Msa0804390:CDS
CCGGTGTCAAGCTGAACTGG+AGG 0.668666 5_3:-20255842 None:intergenic
TACTCGCAGCAGTTAAACGT+AGG 0.669963 5_3:+20255375 Msa0804390:CDS
ACTAACCATCCTGAGGAGTG+AGG 0.672997 5_3:-20257703 None:intergenic
GCGGATATTTGATCATGACA+GGG 0.678093 5_3:+20257316 Msa0804390:CDS
TGGTGTGTGCAAGAATTGGA+GGG 0.700448 5_3:+20257122 Msa0804390:CDS
AACATGTAAAGTGTGTTTAG+GGG 0.701783 5_3:+20257938 Msa0804390:CDS
CGGATATTTGATCATGACAG+GGG 0.702309 5_3:+20257317 Msa0804390:CDS
CATCACAACTAACCATCCTG+AGG 0.720834 5_3:-20257710 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAATATATAAATAA+TGG - chr5_3:20255879-20255898 None:intergenic 0.0%
!! ATAAATATATAAATAATGGT+AGG - chr5_3:20255875-20255894 None:intergenic 10.0%
!! AAAAAAAAAAACATATCTTT+CGG + chr5_3:20256939-20256958 Msa0804390:intron 10.0%
!!! TGAGTTTTTAAAAATTGTTA+AGG + chr5_3:20255697-20255716 Msa0804390:CDS 15.0%
!!! TTCTAAAAATTTTATATCTG+TGG - chr5_3:20257655-20257674 None:intergenic 15.0%
!!! ATCTTTTCTACAAATTATGA+AGG + chr5_3:20255427-20255446 Msa0804390:CDS 20.0%
!! ATTTCGAAATTAAATCTTCA+TGG - chr5_3:20255517-20255536 None:intergenic 20.0%
!! AAAAATTGTTAAGGATTTCA+AGG + chr5_3:20255706-20255725 Msa0804390:CDS 20.0%
!! GCTATAAAGATTCAATAAAT+TGG + chr5_3:20255915-20255934 Msa0804390:intron 20.0%
!!! ATAAGAAGAATTGACTTTAA+AGG - chr5_3:20257406-20257425 None:intergenic 20.0%
! TTTGAGAAAAGGGAAAAATA+TGG + chr5_3:20255404-20255423 Msa0804390:CDS 25.0%
! ACAAATTATGAAGGATTTCA+AGG + chr5_3:20255436-20255455 Msa0804390:CDS 25.0%
!! AGTTTGATTTCATATTCAGT+TGG - chr5_3:20255554-20255573 None:intergenic 25.0%
! ATATGAAATCAAACTTCCAT+TGG + chr5_3:20255559-20255578 Msa0804390:CDS 25.0%
! AAAGTAAAAGATGTGTTTCA+TGG + chr5_3:20255653-20255672 Msa0804390:CDS 25.0%
! GATTAAGTTTAACGATAAGT+TGG + chr5_3:20255980-20255999 Msa0804390:intron 25.0%
!! ATCTTTGGAGAATTAAAAGT+AGG + chr5_3:20256096-20256115 Msa0804390:intron 25.0%
!! TCTTTGGAGAATTAAAAGTA+GGG + chr5_3:20256097-20256116 Msa0804390:intron 25.0%
!! TTCATGCATTTTATGTCTAT+AGG + chr5_3:20256128-20256147 Msa0804390:intron 25.0%
!! AGTTTTTACAAGTGAACATT+AGG - chr5_3:20256156-20256175 None:intergenic 25.0%
!! TATTTCTTTTCTTCTGAACA+TGG + chr5_3:20256413-20256432 Msa0804390:intron 25.0%
!! TTCATGTATTTTATGTCCAT+GGG + chr5_3:20256490-20256509 Msa0804390:intron 25.0%
!!! TTTTAATTCCAAAGTTTCAC+AGG - chr5_3:20256554-20256573 None:intergenic 25.0%
! ATCACAACAATGACAATATT+AGG - chr5_3:20256996-20257015 None:intergenic 25.0%
! AAGATGGTTGTAAAATTTCT+TGG + chr5_3:20257043-20257062 Msa0804390:CDS 25.0%
! AGATGGTTGTAAAATTTCTT+GGG + chr5_3:20257044-20257063 Msa0804390:CDS 25.0%
! GGGAATTTCATAAAACTTAT+TGG + chr5_3:20257142-20257161 Msa0804390:CDS 25.0%
! AACTTATTGGAAAAAGTTCT+TGG + chr5_3:20257155-20257174 Msa0804390:CDS 25.0%
! TTTGAATAAGTAATGGTTCT+TGG - chr5_3:20257185-20257204 None:intergenic 25.0%
!! GAAGACTTTTGAATAAGTAA+TGG - chr5_3:20257192-20257211 None:intergenic 25.0%
! GTAAACATTCAATATTTCCT+CGG - chr5_3:20257763-20257782 None:intergenic 25.0%
!!! CATTGCATTATTTTATGCTT+CGG + chr5_3:20257833-20257852 Msa0804390:CDS 25.0%
!!! ATTGCATTATTTTATGCTTC+GGG + chr5_3:20257834-20257853 Msa0804390:CDS 25.0%
!! CTATCATGCTTAATGTATTT+TGG - chr5_3:20257978-20257997 None:intergenic 25.0%
TAGGTTTGGATTTGAGAAAA+GGG + chr5_3:20255394-20255413 Msa0804390:CDS 30.0%
! AATTGATATAAGTGTTGCTG+CGG + chr5_3:20255736-20255755 Msa0804390:CDS 30.0%
TTCTCTCAATACAATAACGA+TGG - chr5_3:20255942-20255961 None:intergenic 30.0%
AGAAGTGAGTGTAAGATTAA+GGG + chr5_3:20255958-20255977 Msa0804390:intron 30.0%
!! AAGTTTAACGATAAGTTGGT+AGG + chr5_3:20255984-20256003 Msa0804390:intron 30.0%
!! AGTTTAACGATAAGTTGGTA+GGG + chr5_3:20255985-20256004 Msa0804390:intron 30.0%
TTCATGTATCAAACAGATGA+AGG + chr5_3:20256069-20256088 Msa0804390:intron 30.0%
! CTTTGGAGAATTAAAAGTAG+GGG + chr5_3:20256098-20256117 Msa0804390:intron 30.0%
CAGGTTTACAAAATATTGTC+TGG - chr5_3:20256218-20256237 None:intergenic 30.0%
ATGATAATTTCTTCGATTGC+AGG - chr5_3:20256237-20256256 None:intergenic 30.0%
ATATGACATGTATCAACCTT+AGG + chr5_3:20256255-20256274 Msa0804390:intron 30.0%
!! TTTTATTCTAGAGACAGCAA+GGG - chr5_3:20256311-20256330 None:intergenic 30.0%
!! TTTTTATTCTAGAGACAGCA+AGG - chr5_3:20256312-20256331 None:intergenic 30.0%
AAACTAAAAAACACACAGAG+TGG - chr5_3:20256384-20256403 None:intergenic 30.0%
GAGCTAAATTTACGATAGAA+TGG + chr5_3:20256461-20256480 Msa0804390:intron 30.0%
! GTTCATGTATTTTATGTCCA+TGG + chr5_3:20256489-20256508 Msa0804390:intron 30.0%
GAGTTGGAAACAATAAAAGA+GGG - chr5_3:20256613-20256632 None:intergenic 30.0%
! TGAGTTGGAAACAATAAAAG+AGG - chr5_3:20256614-20256633 None:intergenic 30.0%
CTCGTATAAATATGAGTTGT+TGG + chr5_3:20256683-20256702 Msa0804390:intron 30.0%
AACGCTTTCAATAGCAATAT+TGG - chr5_3:20256720-20256739 None:intergenic 30.0%
!!! TTTTTTTCGACCTATTCTGA+AGG + chr5_3:20256785-20256804 Msa0804390:intron 30.0%
!!! TTTTTTCGACCTATTCTGAA+GGG + chr5_3:20256786-20256805 Msa0804390:intron 30.0%
AGAATGTTAATTTCCATGTG+AGG + chr5_3:20256860-20256879 Msa0804390:intron 30.0%
GAATGTTAATTTCCATGTGA+GGG + chr5_3:20256861-20256880 Msa0804390:intron 30.0%
ACAACAATGACAATATTAGG+TGG - chr5_3:20256993-20257012 None:intergenic 30.0%
GCAATGAATAACATACAAGA+TGG + chr5_3:20257027-20257046 Msa0804390:CDS 30.0%
GGAAAAGGATTTCTTATCAT+GGG - chr5_3:20257214-20257233 None:intergenic 30.0%
AGGAAAAGGATTTCTTATCA+TGG - chr5_3:20257215-20257234 None:intergenic 30.0%
TCCATTTACAAGAAGAAAGA+AGG + chr5_3:20257365-20257384 Msa0804390:CDS 30.0%
ACCTTCTTTCTTCTTGTAAA+TGG - chr5_3:20257369-20257388 None:intergenic 30.0%
! AACCATGAATTTTGTCAAGA+TGG + chr5_3:20257797-20257816 Msa0804390:CDS 30.0%
TTCCATCTTGACAAAATTCA+TGG - chr5_3:20257802-20257821 None:intergenic 30.0%
! TTTTGTCAAGATGGAAACTT+TGG + chr5_3:20257806-20257825 Msa0804390:CDS 30.0%
TTTGTCAAGATGGAAACTTT+GGG + chr5_3:20257807-20257826 Msa0804390:CDS 30.0%
!! TTGCATTATTTTATGCTTCG+GGG + chr5_3:20257835-20257854 Msa0804390:CDS 30.0%
TAAACACACTTTACATGTTG+TGG - chr5_3:20257937-20257956 None:intergenic 30.0%
ACAACATGTAAAGTGTGTTT+AGG + chr5_3:20257936-20257955 Msa0804390:CDS 30.0%
CAACATGTAAAGTGTGTTTA+GGG + chr5_3:20257937-20257956 Msa0804390:CDS 30.0%
AACATGTAAAGTGTGTTTAG+GGG + chr5_3:20257938-20257957 Msa0804390:CDS 30.0%
GTAGGTTTGGATTTGAGAAA+AGG + chr5_3:20255393-20255412 Msa0804390:CDS 35.0%
! ATTAAGAGTGTACGAGTTGT+TGG + chr5_3:20255487-20255506 Msa0804390:CDS 35.0%
TGTGTTTCATGGTAAGAATG+AGG + chr5_3:20255664-20255683 Msa0804390:CDS 35.0%
ATTGTTAAGGATTTCAAGGC+TGG + chr5_3:20255710-20255729 Msa0804390:CDS 35.0%
!! AGGGCATACGGATTTAATTT+TGG + chr5_3:20255781-20255800 Msa0804390:CDS 35.0%
!! GGGCATACGGATTTAATTTT+GGG + chr5_3:20255782-20255801 Msa0804390:CDS 35.0%
TCGATATTTCTTTGGCAAGA+AGG - chr5_3:20255816-20255835 None:intergenic 35.0%
GGTGTGATTCGATATTTCTT+TGG - chr5_3:20255824-20255843 None:intergenic 35.0%
AATAATGGTAGGCTACTAAC+CGG - chr5_3:20255864-20255883 None:intergenic 35.0%
GAGAAGTGAGTGTAAGATTA+AGG + chr5_3:20255957-20255976 Msa0804390:intron 35.0%
ATATTTCCCCTAAACCTTGA+AGG - chr5_3:20256012-20256031 None:intergenic 35.0%
ACAGATGAAGGCTATATCTT+TGG + chr5_3:20256081-20256100 Msa0804390:intron 35.0%
CAAAATATTGTCTGGATGCA+AGG - chr5_3:20256210-20256229 None:intergenic 35.0%
TGAGTGTCAAATGAATCCTA+AGG - chr5_3:20256274-20256293 None:intergenic 35.0%
CTATCAAGACAGTTCTTATC+AGG - chr5_3:20256528-20256547 None:intergenic 35.0%
GATAGTTTCCTGTGAAACTT+TGG + chr5_3:20256543-20256562 Msa0804390:intron 35.0%
! TCATAGTTAGTCTCATCCTT+AGG + chr5_3:20256584-20256603 Msa0804390:intron 35.0%
CAATAAAAGAGGGAATCCTA+AGG - chr5_3:20256603-20256622 None:intergenic 35.0%
ATACGAGAAAGAGACAACAA+GGG - chr5_3:20256670-20256689 None:intergenic 35.0%
TATACGAGAAAGAGACAACA+AGG - chr5_3:20256671-20256690 None:intergenic 35.0%
GCTTTCAATAGCAATATTGG+TGG - chr5_3:20256717-20256736 None:intergenic 35.0%
TTGTCATTGTTGTGATACAC+AGG + chr5_3:20257000-20257019 Msa0804390:intron 35.0%
TGTCATTGTTGTGATACACA+GGG + chr5_3:20257001-20257020 Msa0804390:intron 35.0%
! CCTTGGAGTGATAAACTTTT+CGG - chr5_3:20257254-20257273 None:intergenic 35.0%
AGTTTGTATGTCTATCAGTC+TGG + chr5_3:20257504-20257523 Msa0804390:CDS 35.0%
TGTCTATCAGTCTGGAAATT+TGG + chr5_3:20257512-20257531 Msa0804390:CDS 35.0%
GTCTATCAGTCTGGAAATTT+GGG + chr5_3:20257513-20257532 Msa0804390:CDS 35.0%
CTGGGTTACATATTCAACAA+TGG + chr5_3:20257536-20257555 Msa0804390:CDS 35.0%
ATTCAACAATGGAAAGTCCA+TGG + chr5_3:20257547-20257566 Msa0804390:CDS 35.0%
!! TGCATTATTTTATGCTTCGG+GGG + chr5_3:20257836-20257855 Msa0804390:CDS 35.0%
TGTTGTGGATGAAAGATTGA+TGG - chr5_3:20257922-20257941 None:intergenic 35.0%
CTTTAGACATCTACACTATG+AGG + chr5_3:20258043-20258062 Msa0804390:CDS 35.0%
GAGAGCTTCTTCATCTTGAA+GGG - chr5_3:20255335-20255354 None:intergenic 40.0%
TGAGAGCTTCTTCATCTTGA+AGG - chr5_3:20255336-20255355 None:intergenic 40.0%
AAGATGAAGAAGCTCTCAGT+TGG + chr5_3:20255338-20255357 Msa0804390:CDS 40.0%
AGGCTGAAAGAATTGATGCT+AGG + chr5_3:20255456-20255475 Msa0804390:CDS 40.0%
GGCTGAAAGAATTGATGCTA+GGG + chr5_3:20255457-20255476 Msa0804390:CDS 40.0%
! CAGGATACATTAGTTTCCCA+TGG - chr5_3:20256509-20256528 None:intergenic 40.0%
! TAGCAATATTGGTGGATGCT+AGG - chr5_3:20256709-20256728 None:intergenic 40.0%
GCGTTATGAACACTCACATT+AGG + chr5_3:20256735-20256754 Msa0804390:intron 40.0%
TTTCCATGTGAGGGTGAAAA+TGG + chr5_3:20256870-20256889 Msa0804390:intron 40.0%
GTCATTGTTGTGATACACAG+GGG + chr5_3:20257002-20257021 Msa0804390:intron 40.0%
GTCATCGAAATCTAGATCTC+TGG - chr5_3:20257088-20257107 None:intergenic 40.0%
AGCTATGCTGATGAAGGAAA+AGG - chr5_3:20257229-20257248 None:intergenic 40.0%
CCGAAAAGTTTATCACTCCA+AGG + chr5_3:20257251-20257270 Msa0804390:CDS 40.0%
AGCGGATATTTGATCATGAC+AGG + chr5_3:20257315-20257334 Msa0804390:CDS 40.0%
GCGGATATTTGATCATGACA+GGG + chr5_3:20257316-20257335 Msa0804390:CDS 40.0%
CGGATATTTGATCATGACAG+GGG + chr5_3:20257317-20257336 Msa0804390:CDS 40.0%
! TACCATGTCTTGCTTGCTTT+TGG + chr5_3:20257432-20257451 Msa0804390:CDS 40.0%
GTCGCTTCATGTAAAAGTTC+TGG + chr5_3:20257480-20257499 Msa0804390:CDS 40.0%
AACAATGGAAAGTCCATGGA+AGG + chr5_3:20257551-20257570 Msa0804390:CDS 40.0%
ACAAAGTCAACAACCTTCCA+TGG - chr5_3:20257567-20257586 None:intergenic 40.0%
TATATACGTTGTCACCGACA+AGG + chr5_3:20257602-20257621 Msa0804390:CDS 40.0%
CAAGTCAAGTACACCTATGT+TGG - chr5_3:20257628-20257647 None:intergenic 40.0%
AGTGAGGTAGATGTTACATC+GGG - chr5_3:20257690-20257709 None:intergenic 40.0%
GAGTGAGGTAGATGTTACAT+CGG - chr5_3:20257691-20257710 None:intergenic 40.0%
AGTGATTCATATTGCTTCCG+AGG + chr5_3:20257743-20257762 Msa0804390:CDS 40.0%
TAGACATCTACACTATGAGG+TGG + chr5_3:20258046-20258065 Msa0804390:CDS 40.0%
TACTCGCAGCAGTTAAACGT+AGG + chr5_3:20255375-20255394 Msa0804390:CDS 45.0%
GCAGCAGTTAAACGTAGGTT+TGG + chr5_3:20255380-20255399 Msa0804390:CDS 45.0%
AGAGTGTACGAGTTGTTGGA+CGG + chr5_3:20255491-20255510 Msa0804390:CDS 45.0%
! GACGATGATGACGAACTACA+AGG + chr5_3:20255590-20255609 Msa0804390:CDS 45.0%
AGAGGGAATGATCTGCTTCA+AGG + chr5_3:20255761-20255780 Msa0804390:CDS 45.0%
GAGGGAATGATCTGCTTCAA+GGG + chr5_3:20255762-20255781 Msa0804390:CDS 45.0%
! TGATCTGCTTCAAGGGCATA+CGG + chr5_3:20255769-20255788 Msa0804390:CDS 45.0%
!! TAAGTTGGTAGGGTCCTTCA+AGG + chr5_3:20255995-20256014 Msa0804390:intron 45.0%
GTAGGGTCCTTCAAGGTTTA+GGG + chr5_3:20256002-20256021 Msa0804390:intron 45.0%
TAGGGTCCTTCAAGGTTTAG+GGG + chr5_3:20256003-20256022 Msa0804390:intron 45.0%
AGAGACAGCAAGGGAGAAAT+TGG - chr5_3:20256302-20256321 None:intergenic 45.0%
! GGATGAGAAGTATGCTGAGT+TGG - chr5_3:20256629-20256648 None:intergenic 45.0%
GGGACATAGTGAGTATGAGT+TGG - chr5_3:20256650-20256669 None:intergenic 45.0%
ACTCGTCTTCCCTTCAGAAT+AGG - chr5_3:20256798-20256817 None:intergenic 45.0%
!! TAGCCATTTTCACCCTCACA+TGG - chr5_3:20256876-20256895 None:intergenic 45.0%
GATGACCTCTTTCAATTCGC+TGG + chr5_3:20257102-20257121 Msa0804390:CDS 45.0%
ACACACCAGCGAATTGAAAG+AGG - chr5_3:20257110-20257129 None:intergenic 45.0%
TGGTGTGTGCAAGAATTGGA+GGG + chr5_3:20257122-20257141 Msa0804390:CDS 45.0%
CCAGAATTGATTGATCGCCT+TGG - chr5_3:20257271-20257290 None:intergenic 45.0%
CCAAGGCGATCAATCAATTC+TGG + chr5_3:20257268-20257287 Msa0804390:CDS 45.0%
TTCTGGCACGTTGCTTATTC+TGG + chr5_3:20257285-20257304 Msa0804390:CDS 45.0%
! GCTTATTCTGGCTGTTCTAG+CGG + chr5_3:20257297-20257316 Msa0804390:CDS 45.0%
TGCCAAAAGCAAGCAAGACA+TGG - chr5_3:20257437-20257456 None:intergenic 45.0%
!! GTCTTGCTTGCTTTTGGCAA+AGG + chr5_3:20257438-20257457 Msa0804390:CDS 45.0%
ATCAGTCTGGAAATTTGGGC+TGG + chr5_3:20257517-20257536 Msa0804390:CDS 45.0%
TCAGTCTGGAAATTTGGGCT+GGG + chr5_3:20257518-20257537 Msa0804390:CDS 45.0%
!! TACACCTATGTTGGCCTTGT+CGG - chr5_3:20257619-20257638 None:intergenic 45.0%
TAACATCTACCTCACTCCTC+AGG + chr5_3:20257694-20257713 Msa0804390:CDS 45.0%
CATCACAACTAACCATCCTG+AGG - chr5_3:20257713-20257732 None:intergenic 45.0%
! CTCAGGATGGTTAGTTGTGA+TGG + chr5_3:20257711-20257730 Msa0804390:CDS 45.0%
TTTCAAAACCCCACCTTCTC+GGG - chr5_3:20257884-20257903 None:intergenic 45.0%
CTTTCAAAACCCCACCTTCT+CGG - chr5_3:20257885-20257904 None:intergenic 45.0%
TAGAACTCGAGTTCCTCCAA+AGG + chr5_3:20257995-20258014 Msa0804390:CDS 45.0%
! AAGTAGGCGTTTTCCTTTGG+AGG - chr5_3:20258011-20258030 None:intergenic 45.0%
! AGCAAGTAGGCGTTTTCCTT+TGG - chr5_3:20258014-20258033 None:intergenic 45.0%
AAAGGAAAACGCCTACTTGC+TGG + chr5_3:20258013-20258032 Msa0804390:CDS 45.0%
! AAAACGCCTACTTGCTGGAT+TGG + chr5_3:20258018-20258037 Msa0804390:CDS 45.0%
! AAAGCACCAATCCAGCAAGT+AGG - chr5_3:20258027-20258046 None:intergenic 45.0%
TCATCGTCGTCACGATCCAA+TGG - chr5_3:20255578-20255597 None:intergenic 50.0%
! ATAAGTGTTGCTGCGGCAAG+AGG + chr5_3:20255743-20255762 Msa0804390:CDS 50.0%
! TAAGTGTTGCTGCGGCAAGA+GGG + chr5_3:20255744-20255763 Msa0804390:CDS 50.0%
! TAACCGGTGTCAAGCTGAAC+TGG - chr5_3:20255848-20255867 None:intergenic 50.0%
GGTAGGGTCCTTCAAGGTTT+AGG + chr5_3:20256001-20256020 Msa0804390:intron 50.0%
TCGCTGGTGTGTGCAAGAAT+TGG + chr5_3:20257118-20257137 Msa0804390:CDS 50.0%
CTGGTGTGTGCAAGAATTGG+AGG + chr5_3:20257121-20257140 Msa0804390:CDS 50.0%
TCGGTCAGCTATGCTGATGA+AGG - chr5_3:20257235-20257254 None:intergenic 50.0%
! TGCTTTTGGCAAAGGCTCAG+AGG + chr5_3:20257446-20257465 Msa0804390:CDS 50.0%
ATCTACCTCACTCCTCAGGA+TGG + chr5_3:20257698-20257717 Msa0804390:CDS 50.0%
ACTAACCATCCTGAGGAGTG+AGG - chr5_3:20257706-20257725 None:intergenic 50.0%
ATGCATTGAGCAACCCGAGA+AGG + chr5_3:20257868-20257887 Msa0804390:CDS 50.0%
ATTGAGCAACCCGAGAAGGT+GGG + chr5_3:20257872-20257891 Msa0804390:CDS 50.0%
CCTCCAGTTCAGCTTGACAC+CGG + chr5_3:20255842-20255861 Msa0804390:CDS 55.0%
GTCACCGACAAGGCCAACAT+AGG + chr5_3:20257612-20257631 Msa0804390:CDS 55.0%
CATTGAGCAACCCGAGAAGG+TGG + chr5_3:20257871-20257890 Msa0804390:CDS 55.0%
TTGAGCAACCCGAGAAGGTG+GGG + chr5_3:20257873-20257892 Msa0804390:CDS 55.0%
! CCGGTGTCAAGCTGAACTGG+AGG - chr5_3:20255845-20255864 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 20255329 20258088 20255329 ID=Msa0804390;Name=Msa0804390
chr5_3 mRNA 20255329 20258088 20255329 ID=Msa0804390-mRNA-1;Parent=Msa0804390;Name=Msa0804390-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0|0|1|1|1|2|0|533
chr5_3 exon 20255329 20255863 20255329 ID=Msa0804390-mRNA-1:exon:8237;Parent=Msa0804390-mRNA-1
chr5_3 exon 20257022 20258088 20257022 ID=Msa0804390-mRNA-1:exon:8238;Parent=Msa0804390-mRNA-1
chr5_3 CDS 20255329 20255863 20255329 ID=Msa0804390-mRNA-1:cds;Parent=Msa0804390-mRNA-1
chr5_3 CDS 20257022 20258088 20257022 ID=Msa0804390-mRNA-1:cds;Parent=Msa0804390-mRNA-1
Gene Sequence

>Msa0804390

ACTCCCTTCAAGATGAAGAAGCTCTCAGTTGGTGATGCATTATCGTTACTCGCAGCAGTTAAACGTAGGTTTGGATTTGAGAAAAGGGAAAAATATGGATCTTTTCTACAAATTATGAAGGATTTCAAGGCTGAAAGAATTGATGCTAGGGATGTCAAATTAAGAGTGTACGAGTTGTTGGACGGCCATGAAGATTTAATTTCGAAATTCAACATCTTCTTGCCAACTGAATATGAAATCAAACTTCCATTGGATCGTGACGACGATGATGACGAACTACAAGGTCATATGTTAGAGACAAAAGATGCATTTGCATTTCTCGAGAAAGTAAAAGATGTGTTTCATGGTAAGAATGAGGAAAAGTATAATGAGTTTTTAAAAATTGTTAAGGATTTCAAGGCTGGAAGAATTGATATAAGTGTTGCTGCGGCAAGAGGGAATGATCTGCTTCAAGGGCATACGGATTTAATTTTGGGATTCAACGCCTTCTTGCCAAAGAAATATCGAATCACACCTCCAGTTCAGCTTGACACCGGGGAAGCAATGAATAACATACAAGATGGTTGTAAAATTTCTTGGGATATGCTTGATCTCATTTCCAGAGATCTAGATTTCGATGACCTCTTTCAATTCGCTGGTGTGTGCAAGAATTGGAGGGAATTTCATAAAACTTATTGGAAAAAGTTCTTGGCATTCCAAGAACCATTACTTATTCAAAAGTCTTCCCATGATAAGAAATCCTTTTCCTTCATCAGCATAGCTGACCGAAAAGTTTATCACTCCAAGGCGATCAATCAATTCTGGCACGTTGCTTATTCTGGCTGTTCTAGCGGATATTTGATCATGACAGGGGACAATAATTCTTTTCTTCTATTGAATCCATTTACAAGAAGAAAGAAGGTAATCAATACATCAACCTTTAAAGTCAATTCTTCTTATTTTGCTTACCATGTCTTGCTTGCTTTTGGCAAAGGCTCAGAGGAATTTGTCTTAGTCGCTTCATGTAAAAGTTCTGGTAGTTTGTATGTCTATCAGTCTGGAAATTTGGGCTGGGTTACATATTCAACAATGGAAAGTCCATGGAAGGTTGTTGACTTTGTTGTTTTGCATCATACTATATACGTTGTCACCGACAAGGCCAACATAGGTGTACTTGACTTGAATTCCACAGATATAAAATTTTTAGAACTGAAGAGTACACCCGATGTAACATCTACCTCACTCCTCAGGATGGTTAGTTGTGATGGACAACTTTTAGTGATTCATATTGCTTCCGAGGAAATATTGAATGTTTACAAGATAGACTTCTCAACCATGAATTTTGTCAAGATGGAAACTTTGGGTGACATTGCATTATTTTATGCTTCGGGGGAATACTTCTATGCATTGAGCAACCCGAGAAGGTGGGGTTTTGAAAGCAACTCTTTGTATGCCATCAATCTTTCATCCACAACATGTAAAGTGTGTTTAGGGGATGATAACGAACTGCCAAAATACATTAAGCATGATAGAACTCGAGTTCCTCCAAAGGAAAACGCCTACTTGCTGGATTGGTGCTTTAGACATCTACACTATGAGGTGGATCTTTCTCCAGTTGAGTAA
Protein sequence

>Msa0804390

TPFKMKKLSVGDALSLLAAVKRRFGFEKREKYGSFLQIMKDFKAERIDARDVKLRVYELLDGHEDLISKFNIFLPTEYEIKLPLDRDDDDDELQGHMLETKDAFAFLEKVKDVFHGKNEEKYNEFLKIVKDFKAGRIDISVAAARGNDLLQGHTDLILGFNAFLPKKYRITPPVQLDTGEAMNNIQDGCKISWDMLDLISRDLDFDDLFQFAGVCKNWREFHKTYWKKFLAFQEPLLIQKSSHDKKSFSFISIADRKVYHSKAINQFWHVAYSGCSSGYLIMTGDNNSFLLLNPFTRRKKVINTSTFKVNSSYFAYHVLLAFGKGSEEFVLVASCKSSGSLYVYQSGNLGWVTYSTMESPWKVVDFVVLHHTIYVVTDKANIGVLDLNSTDIKFLELKSTPDVTSTSLLRMVSCDGQLLVIHIASEEILNVYKIDFSTMNFVKMETLGDIALFYASGEYFYALSNPRRWGFESNSLYAINLSSTTCKVCLGDDNELPKYIKHDRTRVPPKENAYLLDWCFRHLHYEVDLSPVE*