AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0809210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0809210 MtrunA17_Chr5g0425261 89.764 381 29 3 1 378 1 374 0.0 692
Msa0809210 MtrunA17_Chr5g0424801 88.451 381 34 3 1 378 1 374 0.0 679
Msa0809210 MtrunA17_Chr5g0424741 54.415 419 136 9 1 369 1 414 1.62e-130 385
Msa0809210 MtrunA17_Chr5g0424931 52.897 397 144 10 1 366 8 392 1.52e-124 370
Msa0809210 MtrunA17_Chr1g0178011 53.003 383 142 11 1 366 1 362 1.94e-116 347
Msa0809210 MtrunA17_Chr2g0289221 51.632 337 131 13 1 323 9 327 1.20e-95 290
Msa0809210 MtrunA17_Chr5g0417281 48.974 341 147 10 8 337 7 331 1.24e-92 288
Msa0809210 MtrunA17_Chr2g0277461 44.560 386 181 15 6 376 7 374 9.65e-87 271
Msa0809210 MtrunA17_Chr5g0417211 50.299 334 129 12 1 317 1 314 5.44e-85 265
Msa0809210 MtrunA17_Chr5g0436761 44.828 348 161 11 6 338 6 337 2.36e-83 262
Msa0809210 MtrunA17_Chr2g0277531 43.519 324 152 13 6 317 14 318 4.70e-74 233
Msa0809210 MtrunA17_Chr5g0425661 56.633 196 69 6 12 195 37 228 3.76e-63 202
Msa0809210 MtrunA17_Chr3g0115271 35.789 380 180 12 9 338 16 381 3.07e-61 207
Msa0809210 MtrunA17_Chr1g0199681 34.878 410 193 16 9 363 91 481 2.32e-55 194
Msa0809210 MtrunA17_Chr2g0326761 35.171 381 184 13 9 338 8 376 5.49e-55 192
Msa0809210 MtrunA17_Chr1g0181211 35.835 413 192 15 9 362 24 422 6.99e-55 192
Msa0809210 MtrunA17_Chr4g0028971 35.443 395 179 15 9 342 9 388 1.25e-51 183
Msa0809210 MtrunA17_Chr5g0424791 65.493 142 45 2 61 200 12 151 7.20e-51 168
Msa0809210 MtrunA17_Chr7g0264171 30.713 407 189 14 9 343 28 413 1.64e-47 171
Msa0809210 MtrunA17_Chr2g0282961 30.102 392 224 17 4 366 43 413 1.67e-39 149
Msa0809210 MtrunA17_Chr7g0264161 32.812 320 171 12 22 317 2 301 1.74e-39 143
Msa0809210 MtrunA17_Chr5g0425651 62.281 114 40 2 227 340 1 111 1.21e-38 135
Msa0809210 MtrunA17_Chr2g0276781 28.093 388 232 11 12 373 23 389 1.58e-35 138
Msa0809210 MtrunA17_Chr4g0009751 28.219 365 232 8 12 360 19 369 1.69e-35 137
Msa0809210 MtrunA17_Chr8g0346711 28.642 405 255 12 12 400 29 415 5.50e-34 134
Msa0809210 MtrunA17_Chr7g0239061 28.022 364 237 10 12 361 14 366 7.20e-34 133
Msa0809210 MtrunA17_Chr4g0046371 28.967 397 215 18 12 371 38 404 8.10e-34 133
Msa0809210 MtrunA17_Chr8g0385791 28.947 342 218 10 12 337 59 391 4.59e-33 131
Msa0809210 MtrunA17_Chr2g0285461 29.226 349 216 12 9 337 20 357 6.38e-33 131
Msa0809210 MtrunA17_Chr5g0433301 29.738 343 216 12 12 337 24 358 9.91e-31 124
Msa0809210 MtrunA17_Chr8g0376771 28.090 356 210 14 9 337 20 356 6.22e-30 122
Msa0809210 MtrunA17_Chr3g0109391 29.060 351 208 13 12 337 26 360 7.82e-30 122
Msa0809210 MtrunA17_Chr2g0301251 29.395 347 216 13 9 337 20 355 1.05e-29 121
Msa0809210 MtrunA17_Chr4g0070181 28.367 349 217 11 9 337 20 355 1.35e-29 121
Msa0809210 MtrunA17_Chr1g0156321 29.275 345 214 11 12 337 43 376 1.51e-29 121
Msa0809210 MtrunA17_Chr2g0326281 29.157 415 227 18 12 378 56 451 9.11e-28 115
Msa0809210 MtrunA17_Chr4g0029671 28.205 390 239 15 12 373 54 430 2.40e-27 114
Msa0809210 MtrunA17_Chr8g0389081 28.212 358 208 12 9 337 29 366 1.10e-25 109
Msa0809210 MtrunA17_Chr5g0419861 35.897 117 69 3 50 160 12 128 1.21e-14 70.5
Msa0809210 MtrunA17_Chr8g0356211 26.316 228 137 10 125 337 9 220 5.72e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0809210 AT1G77850.2 35.106 376 187 14 8 338 15 378 3.76e-62 211
Msa0809210 AT1G77850.1 35.106 376 187 14 8 338 15 378 4.10e-62 210
Msa0809210 AT4G30080.1 35.369 393 191 15 9 349 16 397 1.84e-51 183
Msa0809210 AT2G28350.1 33.838 396 185 16 9 342 7 387 1.60e-48 175
Msa0809210 AT2G28350.2 33.838 396 185 16 9 342 7 387 1.90e-48 175
Msa0809210 AT2G46530.3 29.620 368 231 9 12 363 42 397 7.72e-41 153
Msa0809210 AT2G46530.1 29.620 368 231 9 12 363 21 376 7.77e-41 153
Msa0809210 AT3G61830.1 29.683 347 220 9 12 344 25 361 9.86e-39 147
Msa0809210 AT1G35520.1 30.918 414 218 18 12 388 27 409 2.86e-38 145
Msa0809210 AT1G34390.1 30.025 403 232 15 12 387 27 406 4.70e-38 145
Msa0809210 AT1G59750.1 31.525 387 229 15 12 379 22 391 9.82e-38 145
Msa0809210 AT1G59750.3 31.525 387 229 15 12 379 22 391 9.82e-38 145
Msa0809210 AT1G59750.2 31.688 385 227 15 12 377 22 389 1.46e-37 144
Msa0809210 AT1G59750.4 31.522 368 219 14 12 360 22 375 4.77e-37 142
Msa0809210 AT1G34410.1 29.927 411 224 18 12 387 27 408 4.07e-36 139
Msa0809210 AT1G35540.1 30.244 410 224 20 12 387 27 408 1.29e-35 138
Msa0809210 AT1G34310.1 29.639 388 214 16 9 366 24 382 1.07e-34 135
Msa0809210 AT5G62000.4 28.775 351 207 12 12 337 61 393 6.04e-33 131
Msa0809210 AT5G62000.2 28.775 351 207 12 12 337 61 393 6.13e-33 131
Msa0809210 AT5G62000.5 28.775 351 207 12 12 337 61 393 6.13e-33 131
Msa0809210 AT5G62000.3 28.775 351 207 12 12 337 61 393 6.13e-33 131
Msa0809210 AT5G62000.1 28.775 351 207 12 12 337 61 393 6.13e-33 131
Msa0809210 AT4G23980.2 28.045 353 219 12 12 342 12 351 7.37e-33 130
Msa0809210 AT4G23980.1 28.045 353 219 12 12 342 12 351 7.80e-33 130
Msa0809210 AT5G37020.2 30.347 346 210 12 12 337 22 356 9.62e-33 130
Msa0809210 AT5G37020.1 30.347 346 210 12 12 337 22 356 1.05e-32 130
Msa0809210 AT2G33860.1 30.387 362 209 14 12 349 54 396 1.39e-32 129
Msa0809210 AT1G35240.1 30.137 365 197 16 12 345 27 364 3.37e-32 128
Msa0809210 AT1G30330.1 29.769 346 212 12 12 337 23 357 6.92e-32 128
Msa0809210 AT1G30330.3 29.769 346 212 12 12 337 25 359 7.06e-32 128
Msa0809210 AT1G30330.2 29.769 346 212 12 12 337 25 359 7.06e-32 128
Msa0809210 AT1G34170.1 29.428 367 206 15 12 351 25 365 4.70e-31 124
Msa0809210 AT1G19850.2 29.714 350 217 12 7 337 38 377 3.03e-29 120
Msa0809210 AT1G19850.1 29.714 350 217 12 7 337 49 388 3.47e-29 120
Msa0809210 AT5G20730.3 29.545 352 210 13 9 337 21 357 6.50e-28 117
Msa0809210 AT5G20730.1 29.545 352 210 13 9 337 21 357 8.62e-28 116
Msa0809210 AT3G61830.2 29.730 296 189 7 59 344 24 310 2.10e-27 114
Msa0809210 AT5G60450.2 28.531 354 212 14 12 337 41 381 2.23e-27 115
Msa0809210 AT5G20730.2 29.060 351 212 12 9 337 21 356 2.32e-27 115
Msa0809210 AT5G60450.1 28.531 354 212 14 12 337 65 405 2.50e-27 114
Msa0809210 AT1G19220.1 27.954 347 221 11 9 337 20 355 2.85e-27 115
Msa0809210 AT1G43950.1 31.863 204 119 6 12 203 27 222 2.21e-26 105
Msa0809210 AT1G34170.2 27.500 360 196 13 12 351 25 339 5.68e-26 109
Msa0809210 AT1G34170.3 27.500 360 196 13 12 351 25 339 1.03e-25 109
Msa0809210 AT2G46530.2 28.897 263 168 7 111 363 36 289 2.53e-22 99.4
Msa0809210 AT2G33860.2 30.159 252 148 11 112 349 2 239 1.98e-18 87.4
Msa0809210 AT5G37020.3 29.412 238 149 9 112 337 31 261 1.65e-16 82.0

Find 103 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCGCATATCTGCCATATTT+TGG 0.143600 5_3:-35277933 None:intergenic
ACCAAGTGAGATATCTTTAT+TGG 0.193551 5_3:+35279560 Msa0809210:CDS
TGTCTCCATCATCGTCTTCT+TGG 0.236516 5_3:-35278201 None:intergenic
AACTGATGAGATTAAGGTTT+TGG 0.252605 5_3:+35278561 Msa0809210:CDS
TAAACTTTAGAGTGAATCTT+TGG 0.260426 5_3:-35277974 None:intergenic
ATTCTTCTAATGTCCCTAAT+TGG 0.268826 5_3:+35278815 Msa0809210:CDS
TGGCCGGGAACTGCAGGAGG+AGG 0.282325 5_3:-35278181 None:intergenic
GATGACAATTTCTCAGCTTA+AGG 0.289847 5_3:+35278768 Msa0809210:CDS
GAATTTAACTGATGAGATTA+AGG 0.298587 5_3:+35278555 Msa0809210:CDS
CGACCCTGCCAAGGTTTGTT+GGG 0.299743 5_3:-35279444 None:intergenic
TCACTTGGTGCTTGGCTCAT+TGG 0.299947 5_3:-35279546 None:intergenic
ACCTCAAGCATGCGCCAATT+AGG 0.318991 5_3:-35278829 None:intergenic
TGCCAAGGATTGACTACGTT+TGG 0.321933 5_3:-35279326 None:intergenic
TTGGCATATCTGTGCAATAT+TGG 0.331366 5_3:+35279579 Msa0809210:CDS
ATGAAGATTGGTTGGAAATC+TGG 0.337904 5_3:+35278697 Msa0809210:CDS
ATTGGTATGCAGTCACAATT+AGG 0.352707 5_3:+35279597 Msa0809210:CDS
GCCGGGAACTGCAGGAGGAG+GGG 0.355302 5_3:-35278179 None:intergenic
CTACTTCCCACGAGGTCATC+TGG 0.355762 5_3:+35277997 Msa0809210:CDS
TCGACCCTGCCAAGGTTTGT+TGG 0.360193 5_3:-35279445 None:intergenic
CCTCAAGCATGCGCCAATTA+GGG 0.367711 5_3:-35278828 None:intergenic
ATCTTTGGAATCTTGACGTC+GGG 0.375178 5_3:-35277959 None:intergenic
GATCTTTCCCAATCTTGCTT+TGG 0.377536 5_3:+35278303 Msa0809210:CDS
TCCATCATCGTCTTCTTGGC+CGG 0.379595 5_3:-35278197 None:intergenic
AGATTTCCAACCAATCTTCA+TGG 0.383662 5_3:-35278695 None:intergenic
ATGACAATTTCTCAGCTTAA+GGG 0.392754 5_3:+35278769 Msa0809210:CDS
CCGGGAACTGCAGGAGGAGG+GGG 0.396016 5_3:-35278178 None:intergenic
AGACTCGTCCAAAGCAAGAT+TGG 0.400052 5_3:-35278311 None:intergenic
CTCGTGTGGAACCCAAAATA+TGG 0.402726 5_3:+35277921 Msa0809210:CDS
CGCTTCATCTGTAGTGAACT+TGG 0.424216 5_3:-35278518 None:intergenic
AATTCCGACAGATATCTTTC+CGG 0.425831 5_3:-35278485 None:intergenic
CTTGGTCAGTTACGGGAGTC+AGG 0.426329 5_3:-35278153 None:intergenic
CGACCTTAAAAGCCGAGAAT+GGG 0.441124 5_3:+35278351 Msa0809210:CDS
TGGAATCTTGACGTCGGGGC+CGG 0.443805 5_3:-35277954 None:intergenic
GTGTATTATCCGACAGCTAT+TGG 0.461034 5_3:+35278625 Msa0809210:CDS
CCATCATCGTCTTCTTGGCC+GGG 0.465753 5_3:-35278196 None:intergenic
TACGGGAGTCAGGAGCAGTT+TGG 0.469490 5_3:-35278143 None:intergenic
TCTTCTTGGCCGGGAACTGC+AGG 0.469723 5_3:-35278187 None:intergenic
GTTGACGATGCCATGAAGAT+TGG 0.477758 5_3:+35278685 Msa0809210:CDS
GACTCGTCCAAAGCAAGATT+GGG 0.479990 5_3:-35278310 None:intergenic
GATGAAAACAACAGAATCGT+TGG 0.490573 5_3:-35278452 None:intergenic
GAAGATTCATATTTCTTCAA+AGG 0.492904 5_3:-35278736 None:intergenic
ATGGTTCTTGTGGCAGCAGT+AGG 0.493323 5_3:-35278037 None:intergenic
TTATCATAGGTTAACTGGGA+TGG 0.493859 5_3:+35279284 Msa0809210:intron
CCGACCTTAAAAGCCGAGAA+TGG 0.494002 5_3:+35278350 Msa0809210:CDS
GACCCTGCCAAGGTTTGTTG+GGG 0.496074 5_3:-35279443 None:intergenic
GGCGGAGTTGACGGTGGAGG+AGG 0.496620 5_3:-35279384 None:intergenic
GGCCGGGAACTGCAGGAGGA+GGG 0.501078 5_3:-35278180 None:intergenic
ATCCAAACGTAGTCAATCCT+TGG 0.506933 5_3:+35279324 Msa0809210:CDS
TGAGGCGGAGTTGACGGTGG+AGG 0.507469 5_3:-35279387 None:intergenic
AAGATATCTCACTTGGTGCT+TGG 0.515083 5_3:-35279554 None:intergenic
GAGACGATGCATGGAATGGA+TGG 0.515792 5_3:-35278076 None:intergenic
TCATCCTCTGCCACCTCGTG+TGG 0.517268 5_3:+35277907 Msa0809210:CDS
AATCTCAGTAGATTACATAC+TGG 0.519388 5_3:+35278394 Msa0809210:CDS
CCCTAATTGGCGCATGCTTG+AGG 0.522896 5_3:+35278828 Msa0809210:CDS
GGTTCCACACGAGGTGGCAG+AGG 0.527487 5_3:-35277911 None:intergenic
GGAAGAGACGATGCATGGAA+TGG 0.530637 5_3:-35278080 None:intergenic
GATGAACTCTCAGCAAGTCT+AGG 0.537540 5_3:-35279419 None:intergenic
GAGGAGGAAGTCGAAGGTGC+AGG 0.538875 5_3:-35279368 None:intergenic
TGACTACGTTTGGATTCTGC+GGG 0.541131 5_3:-35279316 None:intergenic
AGATATCTGTCGGAATTCGC+AGG 0.543135 5_3:+35278491 Msa0809210:CDS
ACTACAGATGAAGCGGATGA+AGG 0.543135 5_3:+35278526 Msa0809210:CDS
CCCTGCCAAGGTTTGTTGGG+GGG 0.543970 5_3:-35279441 None:intergenic
TTTGGATGCAGTGGAATTGG+CGG 0.544683 5_3:+35278579 Msa0809210:CDS
TTGTAAACTTCAACCTGCCA+AGG 0.544687 5_3:-35279341 None:intergenic
AAACGTAGTCAATCCTTGGC+AGG 0.548583 5_3:+35279328 Msa0809210:CDS
ACGATGCCATGAAGATTGGT+TGG 0.558168 5_3:+35278689 Msa0809210:CDS
GCCAATAAAGATATCTCACT+TGG 0.558384 5_3:-35279561 None:intergenic
ACCCTGCCAAGGTTTGTTGG+GGG 0.559662 5_3:-35279442 None:intergenic
TCAGTAGATTACATACTGGC+TGG 0.560711 5_3:+35278398 Msa0809210:CDS
CCCGGCCAAGAAGACGATGA+TGG 0.562611 5_3:+35278196 Msa0809210:CDS
ATTATCCGACAGCTATTGGT+TGG 0.574808 5_3:+35278629 Msa0809210:CDS
TTGACTACGTTTGGATTCTG+CGG 0.576136 5_3:-35279317 None:intergenic
TCTTGGCCGGGAACTGCAGG+AGG 0.578440 5_3:-35278184 None:intergenic
TGGACGGTAACGATCAAGAA+TGG 0.583957 5_3:-35278056 None:intergenic
CAAGTTCACTACAGATGAAG+CGG 0.584809 5_3:+35278519 Msa0809210:CDS
AAAATATGGCAGATATGCGC+CGG 0.589425 5_3:+35277935 Msa0809210:CDS
TGGTTCTTGTGGCAGCAGTA+GGG 0.594429 5_3:-35278036 None:intergenic
TGACAATTTCTCAGCTTAAG+GGG 0.599563 5_3:+35278770 Msa0809210:CDS
TAATCTACTGAGATTTGCAT+AGG 0.604127 5_3:-35278386 None:intergenic
TCAACGGAAGAGACGATGCA+TGG 0.604313 5_3:-35278085 None:intergenic
GCAAAGACCTCGTCGGTGTG+AGG 0.608714 5_3:-35278121 None:intergenic
CAAACCTTGGCAGGGTCGAG+TGG 0.615213 5_3:+35279449 Msa0809210:CDS
GACCTTAAAAGCCGAGAATG+GGG 0.616896 5_3:+35278352 Msa0809210:CDS
CGATGCATGGAATGGATGGA+CGG 0.620709 5_3:-35278072 None:intergenic
ACAGATGAAGCGGATGAAGG+AGG 0.630115 5_3:+35278529 Msa0809210:CDS
AATCTTTGGAATCTTGACGT+CGG 0.630358 5_3:-35277960 None:intergenic
ACGATCAAGAATGGTTCTTG+TGG 0.631537 5_3:-35278047 None:intergenic
TCTTGAGGCGGAGTTGACGG+TGG 0.632846 5_3:-35279390 None:intergenic
TCACGCCAACCAATAGCTGT+CGG 0.635734 5_3:-35278634 None:intergenic
TTGTGTGAGAGTCTTGACAT+AGG 0.637006 5_3:-35278233 None:intergenic
AGTACCACTCGACCCTGCCA+AGG 0.642496 5_3:-35279453 None:intergenic
TCTGCCGGAAAGATATCTGT+CGG 0.642648 5_3:+35278481 Msa0809210:CDS
AGGATCAACAAAGAGATCAA+CGG 0.651533 5_3:-35278101 None:intergenic
ACCTTAAAAGCCGAGAATGG+GGG 0.652954 5_3:+35278353 Msa0809210:CDS
TGTTGATCCTCACACCGACG+AGG 0.655379 5_3:+35278114 Msa0809210:CDS
CAGTTTGGCAAAGACCTCGT+CGG 0.663811 5_3:-35278128 None:intergenic
AGGTGGCAGAGGATGAGACA+TGG 0.663852 5_3:-35277900 None:intergenic
TCTTTGGAATCTTGACGTCG+GGG 0.665271 5_3:-35277958 None:intergenic
ATCGAGTTAGAGCATTCGAT+AGG 0.670484 5_3:-35278283 None:intergenic
CATGTTCCAGATGACCTCGT+GGG 0.672658 5_3:-35278003 None:intergenic
GCATGTTCCAGATGACCTCG+TGG 0.672744 5_3:-35278004 None:intergenic
ACGGTGGAGGAGGAAGTCGA+AGG 0.704506 5_3:-35279374 None:intergenic
AAAGTTTACTACTTCCCACG+AGG 0.761653 5_3:+35277989 Msa0809210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTTTATCTTTTTATCAT+AGG + chr5_3:35279271-35279290 Msa0809210:intron 15.0%
!!! GTTTTTTATCTTTTTATCAT+AGG + chr5_3:35279271-35279290 Msa0809210:intron 15.0%
!! TCAATCAAATAATCTTATCA+TGG - chr5_3:35278908-35278927 None:intergenic 20.0%
!!! AAAAGTTTTTACTTAGCATT+AGG - chr5_3:35279182-35279201 None:intergenic 20.0%
!! TCAATCAAATAATCTTATCA+TGG - chr5_3:35278908-35278927 None:intergenic 20.0%
!!! AAAAGTTTTTACTTAGCATT+AGG - chr5_3:35279182-35279201 None:intergenic 20.0%
!!! TAAACTTTAGAGTGAATCTT+TGG - chr5_3:35277977-35277996 None:intergenic 25.0%
! GAATTTAACTGATGAGATTA+AGG + chr5_3:35278555-35278574 Msa0809210:CDS 25.0%
! GAAGATTCATATTTCTTCAA+AGG - chr5_3:35278739-35278758 None:intergenic 25.0%
! GTACATATGCTTTCTTAATT+TGG + chr5_3:35278850-35278869 Msa0809210:intron 25.0%
!!! CTATTTTTAGTGAATATCAC+TGG - chr5_3:35279115-35279134 None:intergenic 25.0%
!! TCTTTTTATCATAGGTTAAC+TGG + chr5_3:35279279-35279298 Msa0809210:intron 25.0%
!! CTTTTTATCATAGGTTAACT+GGG + chr5_3:35279280-35279299 Msa0809210:intron 25.0%
!!! TAAACTTTAGAGTGAATCTT+TGG - chr5_3:35277977-35277996 None:intergenic 25.0%
! GAATTTAACTGATGAGATTA+AGG + chr5_3:35278555-35278574 Msa0809210:CDS 25.0%
! GAAGATTCATATTTCTTCAA+AGG - chr5_3:35278739-35278758 None:intergenic 25.0%
! GTACATATGCTTTCTTAATT+TGG + chr5_3:35278850-35278869 Msa0809210:intron 25.0%
!!! CTATTTTTAGTGAATATCAC+TGG - chr5_3:35279115-35279134 None:intergenic 25.0%
!! TCTTTTTATCATAGGTTAAC+TGG + chr5_3:35279279-35279298 Msa0809210:intron 25.0%
!! CTTTTTATCATAGGTTAACT+GGG + chr5_3:35279280-35279299 Msa0809210:intron 25.0%
TAATCTACTGAGATTTGCAT+AGG - chr5_3:35278389-35278408 None:intergenic 30.0%
AATCTCAGTAGATTACATAC+TGG + chr5_3:35278394-35278413 Msa0809210:CDS 30.0%
! AACTGATGAGATTAAGGTTT+TGG + chr5_3:35278561-35278580 Msa0809210:CDS 30.0%
ATGACAATTTCTCAGCTTAA+GGG + chr5_3:35278769-35278788 Msa0809210:CDS 30.0%
ATTCTTCTAATGTCCCTAAT+TGG + chr5_3:35278815-35278834 Msa0809210:CDS 30.0%
!! AGGAGTATTTACAATGAGAA+AGG - chr5_3:35279162-35279181 None:intergenic 30.0%
CTTTGCTTCATAACCATAAT+AGG + chr5_3:35279522-35279541 Msa0809210:intron 30.0%
ACCAAGTGAGATATCTTTAT+TGG + chr5_3:35279560-35279579 Msa0809210:CDS 30.0%
TAATCTACTGAGATTTGCAT+AGG - chr5_3:35278389-35278408 None:intergenic 30.0%
AATCTCAGTAGATTACATAC+TGG + chr5_3:35278394-35278413 Msa0809210:CDS 30.0%
! AACTGATGAGATTAAGGTTT+TGG + chr5_3:35278561-35278580 Msa0809210:CDS 30.0%
ATGACAATTTCTCAGCTTAA+GGG + chr5_3:35278769-35278788 Msa0809210:CDS 30.0%
ATTCTTCTAATGTCCCTAAT+TGG + chr5_3:35278815-35278834 Msa0809210:CDS 30.0%
!! AGGAGTATTTACAATGAGAA+AGG - chr5_3:35279162-35279181 None:intergenic 30.0%
CTTTGCTTCATAACCATAAT+AGG + chr5_3:35279522-35279541 Msa0809210:intron 30.0%
ACCAAGTGAGATATCTTTAT+TGG + chr5_3:35279560-35279579 Msa0809210:CDS 30.0%
!! AATCTTTGGAATCTTGACGT+CGG - chr5_3:35277963-35277982 None:intergenic 35.0%
AGGATCAACAAAGAGATCAA+CGG - chr5_3:35278104-35278123 None:intergenic 35.0%
GATGAAAACAACAGAATCGT+TGG - chr5_3:35278455-35278474 None:intergenic 35.0%
! GTTTTCATCAAAAACTCTGC+CGG + chr5_3:35278466-35278485 Msa0809210:CDS 35.0%
AATTCCGACAGATATCTTTC+CGG - chr5_3:35278488-35278507 None:intergenic 35.0%
AGATTTCCAACCAATCTTCA+TGG - chr5_3:35278698-35278717 None:intergenic 35.0%
! ATGAAGATTGGTTGGAAATC+TGG + chr5_3:35278697-35278716 Msa0809210:CDS 35.0%
GATGACAATTTCTCAGCTTA+AGG + chr5_3:35278768-35278787 Msa0809210:CDS 35.0%
TGACAATTTCTCAGCTTAAG+GGG + chr5_3:35278770-35278789 Msa0809210:CDS 35.0%
CTATCAAGTGCAAGAACAAT+GGG - chr5_3:35279034-35279053 None:intergenic 35.0%
TCTATCAAGTGCAAGAACAA+TGG - chr5_3:35279035-35279054 None:intergenic 35.0%
TACAATGAGAAAGGCTTAGA+AGG - chr5_3:35279153-35279172 None:intergenic 35.0%
TTATCATAGGTTAACTGGGA+TGG + chr5_3:35279284-35279303 Msa0809210:intron 35.0%
! AAGTCTAGGAGTTTTTCTTG+AGG - chr5_3:35279408-35279427 None:intergenic 35.0%
GCCAATAAAGATATCTCACT+TGG - chr5_3:35279564-35279583 None:intergenic 35.0%
TTGGCATATCTGTGCAATAT+TGG + chr5_3:35279579-35279598 Msa0809210:CDS 35.0%
ATTGGTATGCAGTCACAATT+AGG + chr5_3:35279597-35279616 Msa0809210:CDS 35.0%
!! AATCTTTGGAATCTTGACGT+CGG - chr5_3:35277963-35277982 None:intergenic 35.0%
AGGATCAACAAAGAGATCAA+CGG - chr5_3:35278104-35278123 None:intergenic 35.0%
GATGAAAACAACAGAATCGT+TGG - chr5_3:35278455-35278474 None:intergenic 35.0%
! GTTTTCATCAAAAACTCTGC+CGG + chr5_3:35278466-35278485 Msa0809210:CDS 35.0%
AATTCCGACAGATATCTTTC+CGG - chr5_3:35278488-35278507 None:intergenic 35.0%
AGATTTCCAACCAATCTTCA+TGG - chr5_3:35278698-35278717 None:intergenic 35.0%
! ATGAAGATTGGTTGGAAATC+TGG + chr5_3:35278697-35278716 Msa0809210:CDS 35.0%
GATGACAATTTCTCAGCTTA+AGG + chr5_3:35278768-35278787 Msa0809210:CDS 35.0%
TGACAATTTCTCAGCTTAAG+GGG + chr5_3:35278770-35278789 Msa0809210:CDS 35.0%
CTATCAAGTGCAAGAACAAT+GGG - chr5_3:35279034-35279053 None:intergenic 35.0%
TCTATCAAGTGCAAGAACAA+TGG - chr5_3:35279035-35279054 None:intergenic 35.0%
TACAATGAGAAAGGCTTAGA+AGG - chr5_3:35279153-35279172 None:intergenic 35.0%
TTATCATAGGTTAACTGGGA+TGG + chr5_3:35279284-35279303 Msa0809210:intron 35.0%
! AAGTCTAGGAGTTTTTCTTG+AGG - chr5_3:35279408-35279427 None:intergenic 35.0%
GCCAATAAAGATATCTCACT+TGG - chr5_3:35279564-35279583 None:intergenic 35.0%
TTGGCATATCTGTGCAATAT+TGG + chr5_3:35279579-35279598 Msa0809210:CDS 35.0%
ATTGGTATGCAGTCACAATT+AGG + chr5_3:35279597-35279616 Msa0809210:CDS 35.0%
! GCGCATATCTGCCATATTTT+GGG - chr5_3:35277935-35277954 None:intergenic 40.0%
AAAATATGGCAGATATGCGC+CGG + chr5_3:35277935-35277954 Msa0809210:CDS 40.0%
!! ATCTTTGGAATCTTGACGTC+GGG - chr5_3:35277962-35277981 None:intergenic 40.0%
AAAGTTTACTACTTCCCACG+AGG + chr5_3:35277989-35278008 Msa0809210:CDS 40.0%
ACGATCAAGAATGGTTCTTG+TGG - chr5_3:35278050-35278069 None:intergenic 40.0%
TTGTGTGAGAGTCTTGACAT+AGG - chr5_3:35278236-35278255 None:intergenic 40.0%
! ATCGAGTTAGAGCATTCGAT+AGG - chr5_3:35278286-35278305 None:intergenic 40.0%
GATCTTTCCCAATCTTGCTT+TGG + chr5_3:35278303-35278322 Msa0809210:CDS 40.0%
TATATGTGTACCCCCATTCT+CGG - chr5_3:35278366-35278385 None:intergenic 40.0%
TCAGTAGATTACATACTGGC+TGG + chr5_3:35278398-35278417 Msa0809210:CDS 40.0%
CAAGTTCACTACAGATGAAG+CGG + chr5_3:35278519-35278538 Msa0809210:CDS 40.0%
!!! GATTAAGGTTTTGGATGCAG+TGG + chr5_3:35278570-35278589 Msa0809210:CDS 40.0%
GTGTATTATCCGACAGCTAT+TGG + chr5_3:35278625-35278644 Msa0809210:CDS 40.0%
ATTATCCGACAGCTATTGGT+TGG + chr5_3:35278629-35278648 Msa0809210:CDS 40.0%
!! TATTGGTTGGCGTGATTTTG+TGG + chr5_3:35278642-35278661 Msa0809210:CDS 40.0%
TTGACTACGTTTGGATTCTG+CGG - chr5_3:35279320-35279339 None:intergenic 40.0%
ATCCAAACGTAGTCAATCCT+TGG + chr5_3:35279324-35279343 Msa0809210:CDS 40.0%
TTGTAAACTTCAACCTGCCA+AGG - chr5_3:35279344-35279363 None:intergenic 40.0%
! TCTAGGAGTTTTTCTTGAGG+CGG - chr5_3:35279405-35279424 None:intergenic 40.0%
TTGGCTCATTGGACCTATTA+TGG - chr5_3:35279538-35279557 None:intergenic 40.0%
!! AAGATATCTCACTTGGTGCT+TGG - chr5_3:35279557-35279576 None:intergenic 40.0%
! GCGCATATCTGCCATATTTT+GGG - chr5_3:35277935-35277954 None:intergenic 40.0%
AAAATATGGCAGATATGCGC+CGG + chr5_3:35277935-35277954 Msa0809210:CDS 40.0%
!! ATCTTTGGAATCTTGACGTC+GGG - chr5_3:35277962-35277981 None:intergenic 40.0%
AAAGTTTACTACTTCCCACG+AGG + chr5_3:35277989-35278008 Msa0809210:CDS 40.0%
ACGATCAAGAATGGTTCTTG+TGG - chr5_3:35278050-35278069 None:intergenic 40.0%
TTGTGTGAGAGTCTTGACAT+AGG - chr5_3:35278236-35278255 None:intergenic 40.0%
! ATCGAGTTAGAGCATTCGAT+AGG - chr5_3:35278286-35278305 None:intergenic 40.0%
GATCTTTCCCAATCTTGCTT+TGG + chr5_3:35278303-35278322 Msa0809210:CDS 40.0%
TATATGTGTACCCCCATTCT+CGG - chr5_3:35278366-35278385 None:intergenic 40.0%
TCAGTAGATTACATACTGGC+TGG + chr5_3:35278398-35278417 Msa0809210:CDS 40.0%
CAAGTTCACTACAGATGAAG+CGG + chr5_3:35278519-35278538 Msa0809210:CDS 40.0%
!!! GATTAAGGTTTTGGATGCAG+TGG + chr5_3:35278570-35278589 Msa0809210:CDS 40.0%
GTGTATTATCCGACAGCTAT+TGG + chr5_3:35278625-35278644 Msa0809210:CDS 40.0%
ATTATCCGACAGCTATTGGT+TGG + chr5_3:35278629-35278648 Msa0809210:CDS 40.0%
!! TATTGGTTGGCGTGATTTTG+TGG + chr5_3:35278642-35278661 Msa0809210:CDS 40.0%
TTGACTACGTTTGGATTCTG+CGG - chr5_3:35279320-35279339 None:intergenic 40.0%
ATCCAAACGTAGTCAATCCT+TGG + chr5_3:35279324-35279343 Msa0809210:CDS 40.0%
TTGTAAACTTCAACCTGCCA+AGG - chr5_3:35279344-35279363 None:intergenic 40.0%
! TCTAGGAGTTTTTCTTGAGG+CGG - chr5_3:35279405-35279424 None:intergenic 40.0%
TTGGCTCATTGGACCTATTA+TGG - chr5_3:35279538-35279557 None:intergenic 40.0%
!! AAGATATCTCACTTGGTGCT+TGG - chr5_3:35279557-35279576 None:intergenic 40.0%
!!! CATATTTTGGGTTCCACACG+AGG - chr5_3:35277923-35277942 None:intergenic 45.0%
CTCGTGTGGAACCCAAAATA+TGG + chr5_3:35277921-35277940 Msa0809210:CDS 45.0%
! GGCGCATATCTGCCATATTT+TGG - chr5_3:35277936-35277955 None:intergenic 45.0%
!! TCTTTGGAATCTTGACGTCG+GGG - chr5_3:35277961-35277980 None:intergenic 45.0%
TGGACGGTAACGATCAAGAA+TGG - chr5_3:35278059-35278078 None:intergenic 45.0%
TGTCTCCATCATCGTCTTCT+TGG - chr5_3:35278204-35278223 None:intergenic 45.0%
GACTCGTCCAAAGCAAGATT+GGG - chr5_3:35278313-35278332 None:intergenic 45.0%
AGACTCGTCCAAAGCAAGAT+TGG - chr5_3:35278314-35278333 None:intergenic 45.0%
!!! CCATTCTCGGCTTTTAAGGT+CGG - chr5_3:35278353-35278372 None:intergenic 45.0%
CGACCTTAAAAGCCGAGAAT+GGG + chr5_3:35278351-35278370 Msa0809210:CDS 45.0%
GACCTTAAAAGCCGAGAATG+GGG + chr5_3:35278352-35278371 Msa0809210:CDS 45.0%
ACCTTAAAAGCCGAGAATGG+GGG + chr5_3:35278353-35278372 Msa0809210:CDS 45.0%
TCTGCCGGAAAGATATCTGT+CGG + chr5_3:35278481-35278500 Msa0809210:CDS 45.0%
AGATATCTGTCGGAATTCGC+AGG + chr5_3:35278491-35278510 Msa0809210:CDS 45.0%
CGCTTCATCTGTAGTGAACT+TGG - chr5_3:35278521-35278540 None:intergenic 45.0%
ACTACAGATGAAGCGGATGA+AGG + chr5_3:35278526-35278545 Msa0809210:CDS 45.0%
!!! GGTTTTGGATGCAGTGGAAT+TGG + chr5_3:35278576-35278595 Msa0809210:CDS 45.0%
TTTGGATGCAGTGGAATTGG+CGG + chr5_3:35278579-35278598 Msa0809210:CDS 45.0%
GTTGACGATGCCATGAAGAT+TGG + chr5_3:35278685-35278704 Msa0809210:CDS 45.0%
ACGATGCCATGAAGATTGGT+TGG + chr5_3:35278689-35278708 Msa0809210:CDS 45.0%
TGACTACGTTTGGATTCTGC+GGG - chr5_3:35279319-35279338 None:intergenic 45.0%
TGCCAAGGATTGACTACGTT+TGG - chr5_3:35279329-35279348 None:intergenic 45.0%
AAACGTAGTCAATCCTTGGC+AGG + chr5_3:35279328-35279347 Msa0809210:CDS 45.0%
! TTTTCTTGAGGCGGAGTTGA+CGG - chr5_3:35279396-35279415 None:intergenic 45.0%
GATGAACTCTCAGCAAGTCT+AGG - chr5_3:35279422-35279441 None:intergenic 45.0%
CCAAACCTTGGCAGTCTTAA+CGG + chr5_3:35279491-35279510 Msa0809210:intron 45.0%
!!! CATATTTTGGGTTCCACACG+AGG - chr5_3:35277923-35277942 None:intergenic 45.0%
CTCGTGTGGAACCCAAAATA+TGG + chr5_3:35277921-35277940 Msa0809210:CDS 45.0%
! GGCGCATATCTGCCATATTT+TGG - chr5_3:35277936-35277955 None:intergenic 45.0%
!! TCTTTGGAATCTTGACGTCG+GGG - chr5_3:35277961-35277980 None:intergenic 45.0%
TGGACGGTAACGATCAAGAA+TGG - chr5_3:35278059-35278078 None:intergenic 45.0%
TGTCTCCATCATCGTCTTCT+TGG - chr5_3:35278204-35278223 None:intergenic 45.0%
GACTCGTCCAAAGCAAGATT+GGG - chr5_3:35278313-35278332 None:intergenic 45.0%
AGACTCGTCCAAAGCAAGAT+TGG - chr5_3:35278314-35278333 None:intergenic 45.0%
!!! CCATTCTCGGCTTTTAAGGT+CGG - chr5_3:35278353-35278372 None:intergenic 45.0%
CGACCTTAAAAGCCGAGAAT+GGG + chr5_3:35278351-35278370 Msa0809210:CDS 45.0%
GACCTTAAAAGCCGAGAATG+GGG + chr5_3:35278352-35278371 Msa0809210:CDS 45.0%
ACCTTAAAAGCCGAGAATGG+GGG + chr5_3:35278353-35278372 Msa0809210:CDS 45.0%
TCTGCCGGAAAGATATCTGT+CGG + chr5_3:35278481-35278500 Msa0809210:CDS 45.0%
AGATATCTGTCGGAATTCGC+AGG + chr5_3:35278491-35278510 Msa0809210:CDS 45.0%
CGCTTCATCTGTAGTGAACT+TGG - chr5_3:35278521-35278540 None:intergenic 45.0%
ACTACAGATGAAGCGGATGA+AGG + chr5_3:35278526-35278545 Msa0809210:CDS 45.0%
!!! GGTTTTGGATGCAGTGGAAT+TGG + chr5_3:35278576-35278595 Msa0809210:CDS 45.0%
TTTGGATGCAGTGGAATTGG+CGG + chr5_3:35278579-35278598 Msa0809210:CDS 45.0%
GTTGACGATGCCATGAAGAT+TGG + chr5_3:35278685-35278704 Msa0809210:CDS 45.0%
ACGATGCCATGAAGATTGGT+TGG + chr5_3:35278689-35278708 Msa0809210:CDS 45.0%
TGACTACGTTTGGATTCTGC+GGG - chr5_3:35279319-35279338 None:intergenic 45.0%
TGCCAAGGATTGACTACGTT+TGG - chr5_3:35279329-35279348 None:intergenic 45.0%
AAACGTAGTCAATCCTTGGC+AGG + chr5_3:35279328-35279347 Msa0809210:CDS 45.0%
! TTTTCTTGAGGCGGAGTTGA+CGG - chr5_3:35279396-35279415 None:intergenic 45.0%
GATGAACTCTCAGCAAGTCT+AGG - chr5_3:35279422-35279441 None:intergenic 45.0%
CCAAACCTTGGCAGTCTTAA+CGG + chr5_3:35279491-35279510 Msa0809210:intron 45.0%
!!! ATTTTGGGTTCCACACGAGG+TGG - chr5_3:35277920-35277939 None:intergenic 50.0%
CATGTTCCAGATGACCTCGT+GGG - chr5_3:35278006-35278025 None:intergenic 50.0%
TGGTTCTTGTGGCAGCAGTA+GGG - chr5_3:35278039-35278058 None:intergenic 50.0%
ATGGTTCTTGTGGCAGCAGT+AGG - chr5_3:35278040-35278059 None:intergenic 50.0%
CGATGCATGGAATGGATGGA+CGG - chr5_3:35278075-35278094 None:intergenic 50.0%
GAGACGATGCATGGAATGGA+TGG - chr5_3:35278079-35278098 None:intergenic 50.0%
GGAAGAGACGATGCATGGAA+TGG - chr5_3:35278083-35278102 None:intergenic 50.0%
TCAACGGAAGAGACGATGCA+TGG - chr5_3:35278088-35278107 None:intergenic 50.0%
CAGTTTGGCAAAGACCTCGT+CGG - chr5_3:35278131-35278150 None:intergenic 50.0%
AGGGGGTTCTTGGTCAGTTA+CGG - chr5_3:35278164-35278183 None:intergenic 50.0%
TCCATCATCGTCTTCTTGGC+CGG - chr5_3:35278200-35278219 None:intergenic 50.0%
CCGACCTTAAAAGCCGAGAA+TGG + chr5_3:35278350-35278369 Msa0809210:CDS 50.0%
! ACCCCCATTCTCGGCTTTTA+AGG - chr5_3:35278357-35278376 None:intergenic 50.0%
ACAGATGAAGCGGATGAAGG+AGG + chr5_3:35278529-35278548 Msa0809210:CDS 50.0%
TCACGCCAACCAATAGCTGT+CGG - chr5_3:35278637-35278656 None:intergenic 50.0%
! TGGTTGGCGTGATTTTGTGG+TGG + chr5_3:35278645-35278664 Msa0809210:CDS 50.0%
CCTCAAGCATGCGCCAATTA+GGG - chr5_3:35278831-35278850 None:intergenic 50.0%
ACCTCAAGCATGCGCCAATT+AGG - chr5_3:35278832-35278851 None:intergenic 50.0%
TTCATCCCCCCAACAAACCT+TGG + chr5_3:35279436-35279455 Msa0809210:CDS 50.0%
CCAAGGTTTGGCTATGTGTC+AGG - chr5_3:35279482-35279501 None:intergenic 50.0%
CCTGACACATAGCCAAACCT+TGG + chr5_3:35279479-35279498 Msa0809210:intron 50.0%
CCGTTAAGACTGCCAAGGTT+TGG - chr5_3:35279494-35279513 None:intergenic 50.0%
!! TCACTTGGTGCTTGGCTCAT+TGG - chr5_3:35279549-35279568 None:intergenic 50.0%
!!! ATTTTGGGTTCCACACGAGG+TGG - chr5_3:35277920-35277939 None:intergenic 50.0%
CATGTTCCAGATGACCTCGT+GGG - chr5_3:35278006-35278025 None:intergenic 50.0%
TGGTTCTTGTGGCAGCAGTA+GGG - chr5_3:35278039-35278058 None:intergenic 50.0%
ATGGTTCTTGTGGCAGCAGT+AGG - chr5_3:35278040-35278059 None:intergenic 50.0%
CGATGCATGGAATGGATGGA+CGG - chr5_3:35278075-35278094 None:intergenic 50.0%
GAGACGATGCATGGAATGGA+TGG - chr5_3:35278079-35278098 None:intergenic 50.0%
GGAAGAGACGATGCATGGAA+TGG - chr5_3:35278083-35278102 None:intergenic 50.0%
TCAACGGAAGAGACGATGCA+TGG - chr5_3:35278088-35278107 None:intergenic 50.0%
CAGTTTGGCAAAGACCTCGT+CGG - chr5_3:35278131-35278150 None:intergenic 50.0%
AGGGGGTTCTTGGTCAGTTA+CGG - chr5_3:35278164-35278183 None:intergenic 50.0%
TCCATCATCGTCTTCTTGGC+CGG - chr5_3:35278200-35278219 None:intergenic 50.0%
CCGACCTTAAAAGCCGAGAA+TGG + chr5_3:35278350-35278369 Msa0809210:CDS 50.0%
! ACCCCCATTCTCGGCTTTTA+AGG - chr5_3:35278357-35278376 None:intergenic 50.0%
ACAGATGAAGCGGATGAAGG+AGG + chr5_3:35278529-35278548 Msa0809210:CDS 50.0%
TCACGCCAACCAATAGCTGT+CGG - chr5_3:35278637-35278656 None:intergenic 50.0%
! TGGTTGGCGTGATTTTGTGG+TGG + chr5_3:35278645-35278664 Msa0809210:CDS 50.0%
CCTCAAGCATGCGCCAATTA+GGG - chr5_3:35278831-35278850 None:intergenic 50.0%
ACCTCAAGCATGCGCCAATT+AGG - chr5_3:35278832-35278851 None:intergenic 50.0%
TTCATCCCCCCAACAAACCT+TGG + chr5_3:35279436-35279455 Msa0809210:CDS 50.0%
CCAAGGTTTGGCTATGTGTC+AGG - chr5_3:35279482-35279501 None:intergenic 50.0%
CCTGACACATAGCCAAACCT+TGG + chr5_3:35279479-35279498 Msa0809210:intron 50.0%
CCGTTAAGACTGCCAAGGTT+TGG - chr5_3:35279494-35279513 None:intergenic 50.0%
!! TCACTTGGTGCTTGGCTCAT+TGG - chr5_3:35279549-35279568 None:intergenic 50.0%
CTACTTCCCACGAGGTCATC+TGG + chr5_3:35277997-35278016 Msa0809210:CDS 55.0%
GCATGTTCCAGATGACCTCG+TGG - chr5_3:35278007-35278026 None:intergenic 55.0%
TGTTGATCCTCACACCGACG+AGG + chr5_3:35278114-35278133 Msa0809210:CDS 55.0%
TACGGGAGTCAGGAGCAGTT+TGG - chr5_3:35278146-35278165 None:intergenic 55.0%
CTTGGTCAGTTACGGGAGTC+AGG - chr5_3:35278156-35278175 None:intergenic 55.0%
GGGGGTTCTTGGTCAGTTAC+GGG - chr5_3:35278163-35278182 None:intergenic 55.0%
CCATCATCGTCTTCTTGGCC+GGG - chr5_3:35278199-35278218 None:intergenic 55.0%
CCCTAATTGGCGCATGCTTG+AGG + chr5_3:35278828-35278847 Msa0809210:CDS 55.0%
!! ACCCTGCCAAGGTTTGTTGG+GGG - chr5_3:35279445-35279464 None:intergenic 55.0%
!! GACCCTGCCAAGGTTTGTTG+GGG - chr5_3:35279446-35279465 None:intergenic 55.0%
! CGACCCTGCCAAGGTTTGTT+GGG - chr5_3:35279447-35279466 None:intergenic 55.0%
TCGACCCTGCCAAGGTTTGT+TGG - chr5_3:35279448-35279467 None:intergenic 55.0%
CAGCACCGTTAAGACTGCCA+AGG - chr5_3:35279499-35279518 None:intergenic 55.0%
CTACTTCCCACGAGGTCATC+TGG + chr5_3:35277997-35278016 Msa0809210:CDS 55.0%
GCATGTTCCAGATGACCTCG+TGG - chr5_3:35278007-35278026 None:intergenic 55.0%
TGTTGATCCTCACACCGACG+AGG + chr5_3:35278114-35278133 Msa0809210:CDS 55.0%
TACGGGAGTCAGGAGCAGTT+TGG - chr5_3:35278146-35278165 None:intergenic 55.0%
CTTGGTCAGTTACGGGAGTC+AGG - chr5_3:35278156-35278175 None:intergenic 55.0%
GGGGGTTCTTGGTCAGTTAC+GGG - chr5_3:35278163-35278182 None:intergenic 55.0%
CCATCATCGTCTTCTTGGCC+GGG - chr5_3:35278199-35278218 None:intergenic 55.0%
CCCTAATTGGCGCATGCTTG+AGG + chr5_3:35278828-35278847 Msa0809210:CDS 55.0%
!! ACCCTGCCAAGGTTTGTTGG+GGG - chr5_3:35279445-35279464 None:intergenic 55.0%
!! GACCCTGCCAAGGTTTGTTG+GGG - chr5_3:35279446-35279465 None:intergenic 55.0%
! CGACCCTGCCAAGGTTTGTT+GGG - chr5_3:35279447-35279466 None:intergenic 55.0%
TCGACCCTGCCAAGGTTTGT+TGG - chr5_3:35279448-35279467 None:intergenic 55.0%
CAGCACCGTTAAGACTGCCA+AGG - chr5_3:35279499-35279518 None:intergenic 55.0%
TCATCCTCTGCCACCTCGTG+TGG + chr5_3:35277907-35277926 Msa0809210:CDS 60.0%
TGGAATCTTGACGTCGGGGC+CGG - chr5_3:35277957-35277976 None:intergenic 60.0%
GCAAAGACCTCGTCGGTGTG+AGG - chr5_3:35278124-35278143 None:intergenic 60.0%
TCTTCTTGGCCGGGAACTGC+AGG - chr5_3:35278190-35278209 None:intergenic 60.0%
CCCGGCCAAGAAGACGATGA+TGG + chr5_3:35278196-35278215 Msa0809210:CDS 60.0%
! GAGGAGGAAGTCGAAGGTGC+AGG - chr5_3:35279371-35279390 None:intergenic 60.0%
ACGGTGGAGGAGGAAGTCGA+AGG - chr5_3:35279377-35279396 None:intergenic 60.0%
TCTTGAGGCGGAGTTGACGG+TGG - chr5_3:35279393-35279412 None:intergenic 60.0%
TCCCCCCAACAAACCTTGGC+AGG + chr5_3:35279440-35279459 Msa0809210:CDS 60.0%
!! CCCTGCCAAGGTTTGTTGGG+GGG - chr5_3:35279444-35279463 None:intergenic 60.0%
CCCCCCAACAAACCTTGGCA+GGG + chr5_3:35279441-35279460 Msa0809210:CDS 60.0%
CAAACCTTGGCAGGGTCGAG+TGG + chr5_3:35279449-35279468 Msa0809210:CDS 60.0%
AGTACCACTCGACCCTGCCA+AGG - chr5_3:35279456-35279475 None:intergenic 60.0%
TCATCCTCTGCCACCTCGTG+TGG + chr5_3:35277907-35277926 Msa0809210:CDS 60.0%
TGGAATCTTGACGTCGGGGC+CGG - chr5_3:35277957-35277976 None:intergenic 60.0%
GCAAAGACCTCGTCGGTGTG+AGG - chr5_3:35278124-35278143 None:intergenic 60.0%
TCTTCTTGGCCGGGAACTGC+AGG - chr5_3:35278190-35278209 None:intergenic 60.0%
CCCGGCCAAGAAGACGATGA+TGG + chr5_3:35278196-35278215 Msa0809210:CDS 60.0%
! GAGGAGGAAGTCGAAGGTGC+AGG - chr5_3:35279371-35279390 None:intergenic 60.0%
ACGGTGGAGGAGGAAGTCGA+AGG - chr5_3:35279377-35279396 None:intergenic 60.0%
TCTTGAGGCGGAGTTGACGG+TGG - chr5_3:35279393-35279412 None:intergenic 60.0%
TCCCCCCAACAAACCTTGGC+AGG + chr5_3:35279440-35279459 Msa0809210:CDS 60.0%
!! CCCTGCCAAGGTTTGTTGGG+GGG - chr5_3:35279444-35279463 None:intergenic 60.0%
CCCCCCAACAAACCTTGGCA+GGG + chr5_3:35279441-35279460 Msa0809210:CDS 60.0%
CAAACCTTGGCAGGGTCGAG+TGG + chr5_3:35279449-35279468 Msa0809210:CDS 60.0%
AGTACCACTCGACCCTGCCA+AGG - chr5_3:35279456-35279475 None:intergenic 60.0%
GGTTCCACACGAGGTGGCAG+AGG - chr5_3:35277914-35277933 None:intergenic 65.0%
CTGCAGGAGGAGGGGGTTCT+TGG - chr5_3:35278174-35278193 None:intergenic 65.0%
TCTTGGCCGGGAACTGCAGG+AGG - chr5_3:35278187-35278206 None:intergenic 65.0%
TGAGGCGGAGTTGACGGTGG+AGG - chr5_3:35279390-35279409 None:intergenic 65.0%
GGTTCCACACGAGGTGGCAG+AGG - chr5_3:35277914-35277933 None:intergenic 65.0%
CTGCAGGAGGAGGGGGTTCT+TGG - chr5_3:35278174-35278193 None:intergenic 65.0%
TCTTGGCCGGGAACTGCAGG+AGG - chr5_3:35278187-35278206 None:intergenic 65.0%
TGAGGCGGAGTTGACGGTGG+AGG - chr5_3:35279390-35279409 None:intergenic 65.0%
CCGGGAACTGCAGGAGGAGG+GGG - chr5_3:35278181-35278200 None:intergenic 70.0%
CCCCCTCCTCCTGCAGTTCC+CGG + chr5_3:35278178-35278197 Msa0809210:CDS 70.0%
GCCGGGAACTGCAGGAGGAG+GGG - chr5_3:35278182-35278201 None:intergenic 70.0%
GGCCGGGAACTGCAGGAGGA+GGG - chr5_3:35278183-35278202 None:intergenic 70.0%
TGGCCGGGAACTGCAGGAGG+AGG - chr5_3:35278184-35278203 None:intergenic 70.0%
GGCGGAGTTGACGGTGGAGG+AGG - chr5_3:35279387-35279406 None:intergenic 70.0%
CCGGGAACTGCAGGAGGAGG+GGG - chr5_3:35278181-35278200 None:intergenic 70.0%
CCCCCTCCTCCTGCAGTTCC+CGG + chr5_3:35278178-35278197 Msa0809210:CDS 70.0%
GCCGGGAACTGCAGGAGGAG+GGG - chr5_3:35278182-35278201 None:intergenic 70.0%
GGCCGGGAACTGCAGGAGGA+GGG - chr5_3:35278183-35278202 None:intergenic 70.0%
TGGCCGGGAACTGCAGGAGG+AGG - chr5_3:35278184-35278203 None:intergenic 70.0%
GGCGGAGTTGACGGTGGAGG+AGG - chr5_3:35279387-35279406 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 35277902 35279629 35277902 ID=Msa0809210;Name=Msa0809210
chr5_3 mRNA 35277902 35279629 35277902 ID=Msa0809210-mRNA-1;Parent=Msa0809210;Name=Msa0809210-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|403
chr5_3 exon 35277902 35278849 35277902 ID=Msa0809210-mRNA-1:exon:11117;Parent=Msa0809210-mRNA-1
chr5_3 exon 35279293 35279470 35279293 ID=Msa0809210-mRNA-1:exon:11118;Parent=Msa0809210-mRNA-1
chr5_3 exon 35279544 35279629 35279544 ID=Msa0809210-mRNA-1:exon:11119;Parent=Msa0809210-mRNA-1
chr5_3 CDS 35277902 35278849 35277902 ID=Msa0809210-mRNA-1:cds;Parent=Msa0809210-mRNA-1
chr5_3 CDS 35279293 35279470 35279293 ID=Msa0809210-mRNA-1:cds;Parent=Msa0809210-mRNA-1
chr5_3 CDS 35279544 35279629 35279544 ID=Msa0809210-mRNA-1:cds;Parent=Msa0809210-mRNA-1
Gene Sequence

>Msa0809210

ATGTCTCATCCTCTGCCACCTCGTGTGGAACCCAAAATATGGCAGATATGCGCCGGCCCCGACGTCAAGATTCCAAAGATTCACTCTAAAGTTTACTACTTCCCACGAGGTCATCTGGAACATGCATGTTCTTTCCCTACTGCTGCCACAAGAACCATTCTTGATCGTTACCGTCCATCCATTCCATGCATCGTCTCTTCCGTTGATCTCTTTGTTGATCCTCACACCGACGAGGTCTTTGCCAAACTGCTCCTGACTCCCGTAACTGACCAAGAACCCCCTCCTCCTGCAGTTCCCGGCCAAGAAGACGATGATGGAGACAATCTTGTTTCCTATGTCAAGACTCTCACACAATCTGATTGTGCAAGAGTATTATGTGTACCTATCGAATGCTCTAACTCGATCTTTCCCAATCTTGCTTTGGACGAGTCTCAGAGCATCACTGTCACCGACCTTAAAAGCCGAGAATGGGGGTACACATATACCTATGCAAATCTCAGTAGATTACATACTGGCTGGTTAAATTTTGTACGAGAGAAGAAACTCGTCGCCAACGATTCTGTTGTTTTCATCAAAAACTCTGCCGGAAAGATATCTGTCGGAATTCGCAGGAACACCAAGTTCACTACAGATGAAGCGGATGAAGGAGGCGAGAATTTAACTGATGAGATTAAGGTTTTGGATGCAGTGGAATTGGCGGAGAAGAACACAGCATTTGATGTTGTGTATTATCCGACAGCTATTGGTTGGCGTGATTTTGTGGTGGATGCTAAGACTAAGACTGTTGACGATGCCATGAAGATTGGTTGGAAATCTGGAATGAGAGTGAAACTTCCTTTGAAGAAATATGAATCTTCAAGTTCAAAGATGACAATTTCTCAGCTTAAGGGGACAATCTCTTTTGTCTTTAATGATTCTTCTAATGTCCCTAATTGGCGCATGCTTGAGGTTAACTGGGATGGACTTGATTTCCCGCAGAATCCAAACGTAGTCAATCCTTGGCAGGTTGAAGTTTACAACATACCTGCACCTTCGACTTCCTCCTCCACCGTCAACTCCGCCTCAAGAAAAACTCCTAGACTTGCTGAGAGTTCATCCCCCCAACAAACCTTGGCAGGGTCGAGTGGTCCAATGAGCCAAGCACCAAGTGAGATATCTTTATTGGCATATCTGTGCAATATTGGTATGCAGTCACAATTAGGAACTCAGTGA
Protein sequence

>Msa0809210

MSHPLPPRVEPKIWQICAGPDVKIPKIHSKVYYFPRGHLEHACSFPTAATRTILDRYRPSIPCIVSSVDLFVDPHTDEVFAKLLLTPVTDQEPPPPAVPGQEDDDGDNLVSYVKTLTQSDCARVLCVPIECSNSIFPNLALDESQSITVTDLKSREWGYTYTYANLSRLHTGWLNFVREKKLVANDSVVFIKNSAGKISVGIRRNTKFTTDEADEGGENLTDEIKVLDAVELAEKNTAFDVVYYPTAIGWRDFVVDAKTKTVDDAMKIGWKSGMRVKLPLKKYESSSSKMTISQLKGTISFVFNDSSNVPNWRMLEVNWDGLDFPQNPNVVNPWQVEVYNIPAPSTSSSTVNSASRKTPRLAESSSPQQTLAGSSGPMSQAPSEISLLAYLCNIGMQSQLGTQ*