Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810640 | XP_003615216.2 | 88.351 | 867 | 60 | 7 | 1 | 856 | 1 | 837 | 0.0 | 1494 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810640 | sp|Q9SSE9|JMJ25_ARATH | 53.696 | 514 | 200 | 4 | 347 | 855 | 415 | 895 | 2.26e-173 | 531 |
| Msa0810640 | sp|Q9SSE9|JMJ25_ARATH | 35.644 | 303 | 190 | 4 | 29 | 329 | 49 | 348 | 1.96e-47 | 186 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810640 | G7KBD9 | 88.351 | 867 | 60 | 7 | 1 | 856 | 1 | 837 | 0.0 | 1494 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0810640 | TR | Jumonji |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810640 | MtrunA17_Chr5g0426961 | 88.351 | 867 | 60 | 7 | 1 | 856 | 1 | 837 | 0.0 | 1494 |
| Msa0810640 | MtrunA17_Chr1g0211711 | 68.953 | 831 | 193 | 10 | 45 | 855 | 267 | 1052 | 0.0 | 1145 |
| Msa0810640 | MtrunA17_Chr1g0183311 | 61.371 | 919 | 253 | 11 | 3 | 855 | 1 | 883 | 0.0 | 1061 |
| Msa0810640 | MtrunA17_Chr1g0211661 | 67.160 | 676 | 190 | 3 | 125 | 794 | 216 | 865 | 0.0 | 925 |
| Msa0810640 | MtrunA17_Chr1g0211691 | 71.010 | 614 | 152 | 7 | 126 | 716 | 334 | 944 | 0.0 | 873 |
| Msa0810640 | MtrunA17_Chr5g0420361 | 61.538 | 676 | 192 | 9 | 205 | 844 | 145 | 788 | 0.0 | 815 |
| Msa0810640 | MtrunA17_Chr6g0472441 | 58.321 | 679 | 189 | 12 | 205 | 844 | 87 | 710 | 0.0 | 746 |
| Msa0810640 | MtrunA17_Chr2g0289121 | 44.391 | 838 | 376 | 18 | 33 | 851 | 53 | 819 | 0.0 | 607 |
| Msa0810640 | MtrunA17_Chr5g0448301 | 57.895 | 551 | 180 | 6 | 221 | 764 | 126 | 631 | 0.0 | 604 |
| Msa0810640 | MtrunA17_Chr4g0075261 | 43.709 | 771 | 321 | 14 | 127 | 851 | 161 | 864 | 0.0 | 602 |
| Msa0810640 | MtrunA17_Chr7g0275771 | 39.398 | 830 | 356 | 18 | 130 | 852 | 136 | 925 | 1.60e-179 | 541 |
| Msa0810640 | MtrunA17_Chr1g0192011 | 35.248 | 766 | 378 | 13 | 134 | 852 | 267 | 961 | 1.57e-147 | 460 |
| Msa0810640 | MtrunA17_Chr2g0289031 | 54.722 | 413 | 158 | 3 | 441 | 851 | 8 | 393 | 9.35e-144 | 430 |
| Msa0810640 | MtrunA17_Chr1g0147021 | 44.712 | 539 | 255 | 12 | 128 | 659 | 864 | 1366 | 7.01e-129 | 424 |
| Msa0810640 | MtrunA17_Chr1g0147021 | 62.112 | 161 | 36 | 1 | 682 | 842 | 1551 | 1686 | 5.33e-54 | 204 |
| Msa0810640 | MtrunA17_Chr2g0281051 | 33.333 | 525 | 326 | 10 | 134 | 649 | 207 | 716 | 6.19e-81 | 280 |
| Msa0810640 | MtrunA17_Chr2g0281051 | 43.103 | 174 | 74 | 2 | 682 | 855 | 810 | 958 | 1.07e-36 | 149 |
| Msa0810640 | MtrunA17_Chr8g0364421 | 46.094 | 256 | 107 | 3 | 243 | 498 | 3 | 227 | 2.52e-64 | 215 |
| Msa0810640 | MtrunA17_Chr1g0211701 | 84.956 | 113 | 17 | 0 | 742 | 854 | 6 | 118 | 8.55e-63 | 208 |
| Msa0810640 | MtrunA17_Chr7g0231061 | 62.424 | 165 | 62 | 0 | 502 | 666 | 12 | 176 | 5.40e-61 | 205 |
| Msa0810640 | MtrunA17_Chr4g0048531 | 38.721 | 297 | 171 | 5 | 357 | 649 | 727 | 1016 | 6.59e-59 | 219 |
| Msa0810640 | MtrunA17_Chr4g0048531 | 46.243 | 173 | 64 | 3 | 681 | 850 | 1132 | 1278 | 1.93e-39 | 158 |
| Msa0810640 | MtrunA17_Chr4g0048531 | 38.323 | 167 | 97 | 3 | 134 | 295 | 260 | 425 | 8.11e-29 | 124 |
| Msa0810640 | MtrunA17_Chr8g0361381 | 52.406 | 187 | 85 | 1 | 437 | 623 | 26 | 208 | 2.01e-58 | 198 |
| Msa0810640 | MtrunA17_Chr2g0289091 | 52.907 | 172 | 46 | 4 | 655 | 816 | 274 | 420 | 2.85e-45 | 168 |
| Msa0810640 | MtrunA17_Chr2g0289091 | 55.862 | 145 | 63 | 1 | 512 | 656 | 20 | 163 | 7.96e-45 | 167 |
| Msa0810640 | MtrunA17_Chr2g0289041 | 40.191 | 209 | 116 | 4 | 156 | 364 | 2 | 201 | 6.48e-44 | 157 |
| Msa0810640 | MtrunA17_Chr8g0340381 | 65.414 | 133 | 27 | 3 | 536 | 668 | 36 | 149 | 6.06e-39 | 143 |
| Msa0810640 | MtrunA17_Chr8g0361391 | 57.018 | 114 | 23 | 2 | 681 | 794 | 50 | 137 | 2.13e-35 | 132 |
| Msa0810640 | MtrunA17_Chr8g0364411 | 53.982 | 113 | 51 | 1 | 134 | 246 | 33 | 144 | 1.79e-32 | 123 |
| Msa0810640 | MtrunA17_Chr1g0211671 | 77.419 | 62 | 14 | 0 | 793 | 854 | 15 | 76 | 3.27e-27 | 107 |
| Msa0810640 | MtrunA17_Chr3g0119761 | 63.333 | 60 | 22 | 0 | 609 | 668 | 55 | 114 | 1.38e-14 | 71.2 |
| Msa0810640 | MtrunA17_Chr2g0289101 | 32.558 | 129 | 81 | 3 | 267 | 394 | 8 | 131 | 9.84e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810640 | AT1G11950.1 | 47.724 | 725 | 331 | 8 | 130 | 851 | 189 | 868 | 0.0 | 665 |
| Msa0810640 | AT1G11950.3 | 47.724 | 725 | 331 | 8 | 130 | 851 | 189 | 868 | 0.0 | 665 |
| Msa0810640 | AT1G62310.1 | 47.273 | 715 | 321 | 12 | 133 | 835 | 208 | 878 | 0.0 | 637 |
| Msa0810640 | AT1G11950.2 | 45.441 | 658 | 311 | 8 | 130 | 784 | 189 | 801 | 0.0 | 561 |
| Msa0810640 | AT3G07610.1 | 53.696 | 514 | 200 | 4 | 347 | 855 | 415 | 895 | 2.30e-174 | 531 |
| Msa0810640 | AT3G07610.1 | 35.644 | 303 | 190 | 4 | 29 | 329 | 49 | 348 | 1.99e-48 | 186 |
| Msa0810640 | AT3G07610.3 | 51.595 | 533 | 204 | 5 | 347 | 855 | 415 | 917 | 2.67e-166 | 511 |
| Msa0810640 | AT3G07610.3 | 35.644 | 303 | 190 | 4 | 29 | 329 | 49 | 348 | 1.82e-48 | 186 |
| Msa0810640 | AT4G00990.3 | 42.909 | 550 | 278 | 13 | 134 | 672 | 80 | 604 | 3.39e-133 | 416 |
| Msa0810640 | AT4G00990.3 | 49.275 | 138 | 40 | 3 | 663 | 800 | 671 | 778 | 2.35e-30 | 129 |
| Msa0810640 | AT4G00990.2 | 42.909 | 550 | 278 | 13 | 134 | 672 | 80 | 604 | 5.53e-133 | 416 |
| Msa0810640 | AT4G00990.2 | 51.538 | 130 | 33 | 3 | 663 | 792 | 671 | 770 | 1.69e-29 | 126 |
| Msa0810640 | AT4G00990.1 | 42.909 | 550 | 278 | 13 | 134 | 672 | 80 | 604 | 1.21e-132 | 417 |
| Msa0810640 | AT4G00990.1 | 53.191 | 188 | 58 | 3 | 663 | 850 | 671 | 828 | 8.13e-52 | 195 |
| Msa0810640 | AT1G09060.2 | 31.647 | 771 | 406 | 16 | 127 | 852 | 197 | 891 | 8.09e-117 | 377 |
| Msa0810640 | AT1G09060.1 | 31.647 | 771 | 406 | 16 | 127 | 852 | 197 | 891 | 8.09e-117 | 377 |
| Msa0810640 | AT1G09060.4 | 31.647 | 771 | 406 | 16 | 127 | 852 | 211 | 905 | 1.03e-116 | 377 |
| Msa0810640 | AT1G09060.3 | 31.647 | 771 | 406 | 16 | 127 | 852 | 211 | 905 | 1.03e-116 | 377 |
| Msa0810640 | AT4G21430.1 | 28.805 | 795 | 448 | 13 | 106 | 855 | 195 | 916 | 4.71e-98 | 327 |
| Msa0810640 | AT3G07610.2 | 55.124 | 283 | 120 | 2 | 347 | 629 | 415 | 690 | 4.67e-89 | 299 |
| Msa0810640 | AT3G07610.2 | 35.644 | 303 | 190 | 4 | 29 | 329 | 49 | 348 | 2.89e-49 | 187 |
Find 200 sgRNAs with CRISPR-Local
Find 473 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCACCATGCAGATAATT+TGG | 0.149377 | 5_3:-39246980 | None:intergenic |
| GGATTTGTATATTCTTTAAA+TGG | 0.213495 | 5_3:-39247968 | None:intergenic |
| AGTACATGCGCTCATCATTA+TGG | 0.215750 | 5_3:-39246726 | None:intergenic |
| GATCTTCATCACGATGATTT+AGG | 0.227135 | 5_3:+39247370 | Msa0810640:CDS |
| CTTCGTTGTGGGCAGCTTCT+AGG | 0.236807 | 5_3:+39246917 | Msa0810640:CDS |
| ATTCCTTAGATGGTGCTCTT+TGG | 0.245043 | 5_3:+39248872 | Msa0810640:CDS |
| TTCCTTAGATGGTGCTCTTT+GGG | 0.262549 | 5_3:+39248873 | Msa0810640:CDS |
| AATGTGCACCAATTCTTTAC+TGG | 0.265399 | 5_3:+39247821 | Msa0810640:CDS |
| AGTACATTGCTGACAATTAC+AGG | 0.278275 | 5_3:-39247424 | None:intergenic |
| GAACAAGAACAAGTCACTTT+TGG | 0.279118 | 5_3:+39247513 | Msa0810640:CDS |
| AGCATCAGGTGCTTTGTATC+TGG | 0.288535 | 5_3:-39247017 | None:intergenic |
| GTTGGTGGGGATTCCTTAGA+TGG | 0.294738 | 5_3:+39248862 | Msa0810640:CDS |
| GTCCCAAGGATAATCATAAT+TGG | 0.295008 | 5_3:+39247855 | Msa0810640:CDS |
| TCACATTTAATCTCAGGTTT+TGG | 0.298428 | 5_3:-39247112 | None:intergenic |
| CTTTCTTCAAATAGTTTAGA+AGG | 0.302686 | 5_3:-39247908 | None:intergenic |
| TACCTCCAATTTGTCCTCTA+TGG | 0.305460 | 5_3:-39251781 | None:intergenic |
| TCATATTGCTGAAGCAAAAC+TGG | 0.320106 | 5_3:+39248723 | Msa0810640:CDS |
| TCTATGGACCTGTGATTTAC+TGG | 0.329135 | 5_3:-39251765 | None:intergenic |
| ATTCCTACGTGGTCAAAATC+TGG | 0.333625 | 5_3:+39247055 | Msa0810640:CDS |
| AGCATTCTGTGCAGCTTCTA+TGG | 0.339021 | 5_3:-39246862 | None:intergenic |
| GGAGCTACATGGTGATATTC+AGG | 0.343116 | 5_3:+39248807 | Msa0810640:CDS |
| ATGCCCGATGGTTAGATAAA+AGG | 0.344516 | 5_3:-39250273 | None:intergenic |
| ATCCCAAAGAGCACCATCTA+AGG | 0.353655 | 5_3:-39248875 | None:intergenic |
| GCTCTTGTTTGAATCCTGTT+AGG | 0.355578 | 5_3:+39247260 | Msa0810640:CDS |
| ACTAACTCGGAGATGCATTC+TGG | 0.375260 | 5_3:-39247169 | None:intergenic |
| CTTGGCTTCTATCTCCTTCT+CGG | 0.376051 | 5_3:-39246384 | None:intergenic |
| AGAAGCATTTCAGAGAGTTC+AGG | 0.389778 | 5_3:+39248941 | Msa0810640:CDS |
| AGAACTTACCAATGTGTTGC+AGG | 0.391063 | 5_3:-39249672 | None:intergenic |
| GTACATGCGCTCATCATTAT+GGG | 0.392626 | 5_3:-39246725 | None:intergenic |
| ATATCATCTCTATTCCTAAC+AGG | 0.396727 | 5_3:-39247274 | None:intergenic |
| AAGTATTGAAATTGAAAGAT+TGG | 0.403818 | 5_3:+39247882 | Msa0810640:CDS |
| AGAGGACGTACCTGCATTGC+AGG | 0.406514 | 5_3:+39248909 | Msa0810640:CDS |
| AGGCCAATTATGATTATCCT+TGG | 0.408256 | 5_3:-39247858 | None:intergenic |
| CCACCGCTCCCGCGTTTGTT+CGG | 0.408616 | 5_3:-39245391 | None:intergenic |
| CAGCTCTTTGCAAAGAATCC+AGG | 0.410316 | 5_3:+39247317 | Msa0810640:CDS |
| TCTTCCACATTTAATACGAT+TGG | 0.410475 | 5_3:+39246346 | Msa0810640:CDS |
| CTTCACCATGCAGATAATTT+GGG | 0.410728 | 5_3:-39246979 | None:intergenic |
| TCTTTCTAGAATAGACATAA+TGG | 0.411099 | 5_3:-39245364 | None:intergenic |
| TTCAATGGCACTGGAGCAAA+GGG | 0.413215 | 5_3:+39247398 | Msa0810640:CDS |
| TCAGGCTGGGCACCAGCATC+AGG | 0.415198 | 5_3:-39247031 | None:intergenic |
| GATAAGAAGAACAACAATAA+AGG | 0.415697 | 5_3:+39245523 | Msa0810640:CDS |
| TTGTGTACCCAGTAAAGAAT+TGG | 0.417175 | 5_3:-39247829 | None:intergenic |
| GAAATGAAAGTGTAAAGAAA+TGG | 0.420297 | 5_3:-39245182 | None:intergenic |
| TCAATGTCAAAGAAATGATA+AGG | 0.420502 | 5_3:+39245915 | Msa0810640:CDS |
| AATGTACTTGAATGTACATC+TGG | 0.421952 | 5_3:+39247439 | Msa0810640:CDS |
| TTACCTTCAGATTTCGGACT+TGG | 0.425214 | 5_3:-39250489 | None:intergenic |
| TAATATGTTGTATTGGTCCT+TGG | 0.428673 | 5_3:+39249640 | Msa0810640:CDS |
| AAACCACCGGTAAACGTAAC+CGG | 0.429322 | 5_3:+39245450 | Msa0810640:CDS |
| CCGTGATCACATTTAATCTC+AGG | 0.429409 | 5_3:-39247118 | None:intergenic |
| AAAATAGTTTGTTGGTTGGT+GGG | 0.432080 | 5_3:+39248848 | Msa0810640:CDS |
| AAAACAGACTCCTCACAATA+AGG | 0.433520 | 5_3:+39245649 | Msa0810640:CDS |
| TTTGACCACGTAGGAATCTC+AGG | 0.438455 | 5_3:-39247049 | None:intergenic |
| AGGCACTTGATTGCTTAGAT+TGG | 0.440544 | 5_3:+39247542 | Msa0810640:CDS |
| TTCAGATATTCCTGCAATGC+AGG | 0.441628 | 5_3:-39248919 | None:intergenic |
| AACAATAAAGGCTCCCGTCT+TGG | 0.441667 | 5_3:+39245535 | Msa0810640:CDS |
| AAGAGCTTTGAGCATATACT+TGG | 0.441941 | 5_3:-39246324 | None:intergenic |
| TATGGATTTGCTGAGGAGCT+TGG | 0.447060 | 5_3:+39248073 | Msa0810640:CDS |
| AAGATAAACTCAAAATCAAA+TGG | 0.449448 | 5_3:-39246950 | None:intergenic |
| AATGTACATCTGGTTTAAGC+TGG | 0.451500 | 5_3:+39247449 | Msa0810640:CDS |
| GGAGCTTGGACGGGGTGATT+CGG | 0.453767 | 5_3:+39248087 | Msa0810640:CDS |
| AACAAACGCGGGAGCGGTGG+CGG | 0.456048 | 5_3:+39245394 | Msa0810640:CDS |
| GACAAAATCAAGTGCAACCT+TGG | 0.456526 | 5_3:-39251688 | None:intergenic |
| ATTTGCTGAGGAGCTTGGAC+GGG | 0.458809 | 5_3:+39248078 | Msa0810640:CDS |
| TCTGGCTTTAGAACTTCATC+AGG | 0.461474 | 5_3:-39248025 | None:intergenic |
| TTCTTCTTGTCTACCAAGAC+GGG | 0.465663 | 5_3:-39245548 | None:intergenic |
| CAGGTCCATAGAGGACAAAT+TGG | 0.466017 | 5_3:+39251776 | Msa0810640:CDS |
| TTCAGATTTCGGACTTGGTG+GGG | 0.467992 | 5_3:-39250484 | None:intergenic |
| GGCCAATTATGATTATCCTT+GGG | 0.468355 | 5_3:-39247857 | None:intergenic |
| GCTGAAGCAAAACTGGATAG+TGG | 0.471171 | 5_3:+39248730 | Msa0810640:CDS |
| TACATTGTAATATGTTGTAT+TGG | 0.471349 | 5_3:+39249633 | Msa0810640:CDS |
| GTCAAAGAAATGATAAGGGC+AGG | 0.472190 | 5_3:+39245920 | Msa0810640:CDS |
| GCAAAGCTTGTTTGAAGTCA+CGG | 0.474647 | 5_3:+39246144 | Msa0810640:CDS |
| CCTTCAGATTTCGGACTTGG+TGG | 0.476898 | 5_3:-39250486 | None:intergenic |
| AAACGCGGGAGCGGTGGCGG+AGG | 0.477252 | 5_3:+39245397 | Msa0810640:CDS |
| CATGCAGATAATTTGGGCCT+CGG | 0.479508 | 5_3:-39246973 | None:intergenic |
| ACGATTGGATCAAGAACAAA+TGG | 0.480998 | 5_3:+39246361 | Msa0810640:CDS |
| ACTACAGTCAATTAAAGAAA+AGG | 0.482579 | 5_3:+39246265 | Msa0810640:intron |
| TGCGGAATTCCTCTGTCAAA+CGG | 0.487229 | 5_3:-39251737 | None:intergenic |
| GTTGCCGTGAGCTTCGTTGT+GGG | 0.489346 | 5_3:+39246906 | Msa0810640:CDS |
| ACTAACTTTACCTCCTCTAC+AGG | 0.489467 | 5_3:-39248979 | None:intergenic |
| TGTGATTTACTGGAAGTTTG+CGG | 0.491065 | 5_3:-39251755 | None:intergenic |
| ATGTGCACCAATTCTTTACT+GGG | 0.492244 | 5_3:+39247822 | Msa0810640:CDS |
| CTTCAGATTTCGGACTTGGT+GGG | 0.495361 | 5_3:-39250485 | None:intergenic |
| CACTGTTGAAAATAGTTTGT+TGG | 0.496892 | 5_3:+39248840 | Msa0810640:CDS |
| AAATGAAAGTGTAAAGAAAT+GGG | 0.502485 | 5_3:-39245181 | None:intergenic |
| TTTCTTCTTGTCTACCAAGA+CGG | 0.504344 | 5_3:-39245549 | None:intergenic |
| GTTGTGGGCAGCTTCTAGGT+GGG | 0.507656 | 5_3:+39246921 | Msa0810640:CDS |
| GATTTGCTGAGGAGCTTGGA+CGG | 0.507712 | 5_3:+39248077 | Msa0810640:CDS |
| GGAAACCAACGATCATCATC+AGG | 0.509624 | 5_3:+39246292 | Msa0810640:CDS |
| TGTATGTAGGTATTGAGCCT+TGG | 0.510562 | 5_3:+39250413 | Msa0810640:intron |
| TGTATATTCTTTAAATGGCA+AGG | 0.512473 | 5_3:-39247963 | None:intergenic |
| CGTTGTGGGCAGCTTCTAGG+TGG | 0.513332 | 5_3:+39246920 | Msa0810640:CDS |
| CTTTGCTTTACATACTAACT+CGG | 0.513784 | 5_3:-39247182 | None:intergenic |
| TTTCAATGGCACTGGAGCAA+AGG | 0.515097 | 5_3:+39247397 | Msa0810640:CDS |
| GCTCCCTCTTGTCTTGCTCA+AGG | 0.519343 | 5_3:-39248789 | None:intergenic |
| GAAAATAGTTTGTTGGTTGG+TGG | 0.519502 | 5_3:+39248847 | Msa0810640:CDS |
| AACAACAACACATTCACGAC+GGG | 0.521041 | 5_3:+39245323 | Msa0810640:CDS |
| TGTTGCCGTGAGCTTCGTTG+TGG | 0.522924 | 5_3:+39246905 | Msa0810640:CDS |
| ACCACGTAGGAATCTCAGGC+TGG | 0.525097 | 5_3:-39247045 | None:intergenic |
| GGAAGAAGAAGCAGCTTCAT+CGG | 0.527580 | 5_3:-39245477 | None:intergenic |
| CAATGTCAAAGAAATGATAA+GGG | 0.528198 | 5_3:+39245916 | Msa0810640:CDS |
| TCTTTCAATTTCAATACTTG+AGG | 0.529125 | 5_3:-39247878 | None:intergenic |
| AAATAGTTTGTTGGTTGGTG+GGG | 0.532716 | 5_3:+39248849 | Msa0810640:CDS |
| TTCCTACGTGGTCAAAATCT+GGG | 0.534093 | 5_3:+39247056 | Msa0810640:CDS |
| TTTGTCTCTCCTGAAAATGT+TGG | 0.534278 | 5_3:+39251705 | Msa0810640:CDS |
| TCAGATTTCGGACTTGGTGG+GGG | 0.534353 | 5_3:-39250483 | None:intergenic |
| TCAAGAACAAATGGCCGAGA+AGG | 0.538911 | 5_3:+39246370 | Msa0810640:CDS |
| TAAAGAAATGGGTGACCGAC+CGG | 0.539876 | 5_3:-39245170 | None:intergenic |
| TGATCCAATCGTATTAAATG+TGG | 0.539950 | 5_3:-39246350 | None:intergenic |
| GAGATAGAAGCCAAGTTACA+AGG | 0.542112 | 5_3:+39246392 | Msa0810640:CDS |
| ACTCCGAACAAACGCGGGAG+CGG | 0.542620 | 5_3:+39245388 | Msa0810640:CDS |
| AATGCACGCCACATGACAAA+CGG | 0.544435 | 5_3:-39247475 | None:intergenic |
| GTCAATTAAAGAAAAGGAGG+AGG | 0.545970 | 5_3:+39246271 | Msa0810640:intron |
| TTTGCTGAGGAGCTTGGACG+GGG | 0.546841 | 5_3:+39248079 | Msa0810640:CDS |
| ATAATGATGAGCGCATGTAC+TGG | 0.548032 | 5_3:+39246728 | Msa0810640:CDS |
| AGCTCTTTGCAAAGAATCCA+GGG | 0.549815 | 5_3:+39247318 | Msa0810640:CDS |
| TGTCCATTGCTCTCCTGTAG+AGG | 0.552261 | 5_3:+39248966 | Msa0810640:CDS |
| TTAGATAAAAGGTCTGATCA+TGG | 0.552811 | 5_3:-39250262 | None:intergenic |
| TCAGATGCACCAAATGCAAA+CGG | 0.554343 | 5_3:+39245947 | Msa0810640:CDS |
| TAAAAGGTCTGATCATGGAT+GGG | 0.555220 | 5_3:-39250257 | None:intergenic |
| CTGAAGCAAAACTGGATAGT+GGG | 0.556295 | 5_3:+39248731 | Msa0810640:CDS |
| ATAAAAGGTCTGATCATGGA+TGG | 0.557609 | 5_3:-39250258 | None:intergenic |
| CTCAACCTGATGATGATCGT+TGG | 0.558986 | 5_3:-39246297 | None:intergenic |
| AGGTTGAGAGCACCTTTGAA+AGG | 0.563537 | 5_3:-39247989 | None:intergenic |
| AAGGTATCCTCGATTGAAAG+AGG | 0.564928 | 5_3:+39246076 | Msa0810640:intron |
| AAGAAGAAGAATCTTGGTGA+TGG | 0.565270 | 5_3:+39245575 | Msa0810640:CDS |
| GTTGAAAATAGTTTGTTGGT+TGG | 0.566984 | 5_3:+39248844 | Msa0810640:CDS |
| GCTGGGAGCCGTTTGTCATG+TGG | 0.567136 | 5_3:+39247467 | Msa0810640:CDS |
| AATTTCAAATGCAGCAGCAG+TGG | 0.567324 | 5_3:-39245257 | None:intergenic |
| GAATATACAAATCCTTTCAA+AGG | 0.567529 | 5_3:+39247977 | Msa0810640:CDS |
| GCACCTTGAGCAAGACAAGA+GGG | 0.570458 | 5_3:+39248786 | Msa0810640:CDS |
| AAGTTTACCGCGTCATTGTG+CGG | 0.570831 | 5_3:+39247928 | Msa0810640:CDS |
| ATGTACATCTGGTTTAAGCT+GGG | 0.572127 | 5_3:+39247450 | Msa0810640:CDS |
| CGAGTTAGTATGTAAAGCAA+AGG | 0.572266 | 5_3:+39247183 | Msa0810640:CDS |
| CTAGAATAGACATAATGGAT+AGG | 0.573963 | 5_3:-39245359 | None:intergenic |
| AGATACAAAGCACCTGATGC+TGG | 0.574516 | 5_3:+39247019 | Msa0810640:CDS |
| AGCTTCTGAACAAAAGTCCA+AGG | 0.575249 | 5_3:-39250430 | None:intergenic |
| CCTGAGATTAAATGTGATCA+CGG | 0.577057 | 5_3:+39247118 | Msa0810640:CDS |
| CATCAGGCAGCTTCACAGCA+AGG | 0.577705 | 5_3:-39248009 | None:intergenic |
| TGATGAAGATCTACAGCCCT+AGG | 0.579045 | 5_3:-39247358 | None:intergenic |
| CCGAACAAACGCGGGAGCGG+TGG | 0.580795 | 5_3:+39245391 | Msa0810640:CDS |
| CGAGGCCCAAATTATCTGCA+TGG | 0.583825 | 5_3:+39246974 | Msa0810640:CDS |
| AATTGTTCCTCTTTCAATCG+AGG | 0.584177 | 5_3:-39246083 | None:intergenic |
| GACGGGGTGATTCGGTGACT+AGG | 0.584547 | 5_3:+39248095 | Msa0810640:CDS |
| GAACAACAACAACAAACCAC+CGG | 0.586106 | 5_3:+39245437 | Msa0810640:CDS |
| ATTTCAAATGCAGCAGCAGT+GGG | 0.586158 | 5_3:-39245256 | None:intergenic |
| GTCCATAGAGGACAAATTGG+AGG | 0.587047 | 5_3:+39251779 | Msa0810640:CDS |
| AGTAAATCACAGGTCCATAG+AGG | 0.591019 | 5_3:+39251767 | Msa0810640:CDS |
| CAAGACAAGAGGGAGCTACA+TGG | 0.591607 | 5_3:+39248796 | Msa0810640:CDS |
| GCTGCCCACAACGAAGCTCA+CGG | 0.592775 | 5_3:-39246910 | None:intergenic |
| GAATAGACATAATGGATAGG+AGG | 0.597179 | 5_3:-39245356 | None:intergenic |
| TTGCAGTTACCACAGCAGAC+AGG | 0.598583 | 5_3:-39246119 | None:intergenic |
| AAGAGACTCCGAACAAACGC+GGG | 0.599912 | 5_3:+39245383 | Msa0810640:CDS |
| GCAAACTTCCAGTAAATCAC+AGG | 0.600882 | 5_3:+39251757 | Msa0810640:CDS |
| TTGTGGGCAGCTTCTAGGTG+GGG | 0.602777 | 5_3:+39246922 | Msa0810640:CDS |
| AAAAGGTCTGATCATGGATG+GGG | 0.603357 | 5_3:-39250256 | None:intergenic |
| TCTTCAAATAGTTTAGAAGG+AGG | 0.604177 | 5_3:-39247905 | None:intergenic |
| ACAGTCAATTAAAGAAAAGG+AGG | 0.606305 | 5_3:+39246268 | Msa0810640:intron |
| TGTTCAGTCCTGCAACACAT+TGG | 0.606348 | 5_3:+39249664 | Msa0810640:CDS |
| TCAAAGAAATGATAAGGGCA+GGG | 0.606870 | 5_3:+39245921 | Msa0810640:CDS |
| AAGAATCTTGGTGATGGTGA+TGG | 0.607702 | 5_3:+39245581 | Msa0810640:CDS |
| CAATAAACAGTGGATTGAAG+AGG | 0.607751 | 5_3:+39245876 | Msa0810640:intron |
| TTATCTGCATGGTGAAGTTG+CGG | 0.608171 | 5_3:+39246985 | Msa0810640:CDS |
| AAAGAGACTCCGAACAAACG+CGG | 0.612408 | 5_3:+39245382 | Msa0810640:CDS |
| AACGAAGCTCACGGCAACAG+AGG | 0.614200 | 5_3:-39246901 | None:intergenic |
| TTGACTCTTTCGAACAGCAA+CGG | 0.617245 | 5_3:-39245498 | None:intergenic |
| GAGGCATGTCCTGTCTGCTG+TGG | 0.617423 | 5_3:+39246110 | Msa0810640:CDS |
| AGCACCTTGAGCAAGACAAG+AGG | 0.618569 | 5_3:+39248785 | Msa0810640:CDS |
| TATTGCTTATGGATTTGCTG+AGG | 0.619448 | 5_3:+39248066 | Msa0810640:CDS |
| GAAAGAGGAACAATTTGCTG+AGG | 0.620045 | 5_3:+39246091 | Msa0810640:CDS |
| TGAAGTTCTAAAGCCAGACA+TGG | 0.620406 | 5_3:+39248030 | Msa0810640:CDS |
| AATGAAACTTCAAGATGCAG+AGG | 0.623550 | 5_3:+39247219 | Msa0810640:CDS |
| CCACGTAGGAATCTCAGGCT+GGG | 0.630864 | 5_3:-39247044 | None:intergenic |
| CTACATGGTGATATTCAGGA+TGG | 0.633510 | 5_3:+39248811 | Msa0810640:CDS |
| CCATTGCTCTCCTGTAGAGG+AGG | 0.634485 | 5_3:+39248969 | Msa0810640:CDS |
| CCACCAAGTCCGAAATCTGA+AGG | 0.638088 | 5_3:+39250486 | Msa0810640:CDS |
| TTGCTGTTCGAAAGAGTCAA+CGG | 0.641060 | 5_3:+39245501 | Msa0810640:CDS |
| CACGGCAACAGAGGAGACAA+AGG | 0.649807 | 5_3:-39246892 | None:intergenic |
| CCTCCTCTACAGGAGAGCAA+TGG | 0.652097 | 5_3:-39248969 | None:intergenic |
| ACAATTTCTCCAAAGAAACC+CGG | 0.657638 | 5_3:+39245620 | Msa0810640:CDS |
| ATGAACTCCGCACAATGACG+CGG | 0.659262 | 5_3:-39247935 | None:intergenic |
| TGAGTGCTTCCGTTTGACAG+AGG | 0.665002 | 5_3:+39251728 | Msa0810640:CDS |
| TTTCCGGTTACGTTTACCGG+TGG | 0.665565 | 5_3:-39245453 | None:intergenic |
| GAAGTTCTAAAGCCAGACAT+GGG | 0.665837 | 5_3:+39248031 | Msa0810640:CDS |
| CAACAACAACACATTCACGA+CGG | 0.666770 | 5_3:+39245322 | Msa0810640:CDS |
| TACATGCGCTCATCATTATG+GGG | 0.667563 | 5_3:-39246724 | None:intergenic |
| ATGATATACACAATAACACA+AGG | 0.668038 | 5_3:+39247290 | Msa0810640:CDS |
| TGGGTACACAAATTGTCCCA+AGG | 0.669653 | 5_3:+39247841 | Msa0810640:CDS |
| GGGTGGCATGCTGATAGTGA+CGG | 0.679311 | 5_3:+39247076 | Msa0810640:CDS |
| CGTATATGCTATGATTGATG+TGG | 0.680480 | 5_3:+39252218 | Msa0810640:CDS |
| TGATTGCTTAGATTGGTGCG+AGG | 0.693830 | 5_3:+39247549 | Msa0810640:CDS |
| GATGTTGTGACCTTATTGTG+AGG | 0.707489 | 5_3:-39245659 | None:intergenic |
| CTACGTGGTCAAAATCTGGG+TGG | 0.719900 | 5_3:+39247059 | Msa0810640:CDS |
| GCTCTTTGCAAAGAATCCAG+GGG | 0.726479 | 5_3:+39247319 | Msa0810640:CDS |
| CTGCGTCAGACATATCACAA+TGG | 0.731463 | 5_3:-39248120 | None:intergenic |
| GTTGCAGGACTGAACAACCA+AGG | 0.732028 | 5_3:-39249657 | None:intergenic |
| TGATATACACAATAACACAA+GGG | 0.738813 | 5_3:+39247291 | Msa0810640:CDS |
| CCCAGCCTGAGATTCCTACG+TGG | 0.744551 | 5_3:+39247044 | Msa0810640:CDS |
| ACAACAACACATTCACGACG+GGG | 0.745848 | 5_3:+39245324 | Msa0810640:CDS |
| TCAATGGCACTGGAGCAAAG+GGG | 0.769506 | 5_3:+39247399 | Msa0810640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTGATTTTGATTAAAAAA+TGG | + | chr5_3:39245277-39245296 | Msa0810640:exon | 10.0% |
| !!! | TTATTTTCCATTTTTTTAAT+TGG | + | chr5_3:39246642-39246661 | Msa0810640:intron | 10.0% |
| !! | TAAATTAGATTACATTACAT+TGG | - | chr5_3:39246040-39246059 | None:intergenic | 15.0% |
| !! | TAAATGAATAGATAAAATGT+AGG | - | chr5_3:39246219-39246238 | None:intergenic | 15.0% |
| !! | TATTTGAGTATCATATTAAA+AGG | + | chr5_3:39248227-39248246 | Msa0810640:intron | 15.0% |
| !! | ATTTGAGTATCATATTAAAA+GGG | + | chr5_3:39248228-39248247 | Msa0810640:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGGCTTTT+AGG | + | chr5_3:39248687-39248706 | Msa0810640:intron | 15.0% |
| !! | TTATTATAGAACACTATAAT+AGG | + | chr5_3:39250920-39250939 | Msa0810640:intron | 15.0% |
| !! | TCTAATATTTAACTAATGTT+TGG | + | chr5_3:39252056-39252075 | Msa0810640:intron | 15.0% |
| !!! | AAATGAAAGTGTAAAGAAAT+GGG | - | chr5_3:39245184-39245203 | None:intergenic | 20.0% |
| !! | AAATTATGTATGCGATTAAT+AGG | - | chr5_3:39245720-39245739 | None:intergenic | 20.0% |
| !! | TATATATAAAATGTGAACCA+TGG | - | chr5_3:39246477-39246496 | None:intergenic | 20.0% |
| !! | AACTAAAAAATGATCAATCA+CGG | - | chr5_3:39246617-39246636 | None:intergenic | 20.0% |
| !! | CCAAAATCCAATTAAAAAAA+TGG | - | chr5_3:39246652-39246671 | None:intergenic | 20.0% |
| !!! | CCATTTTTTTAATTGGATTT+TGG | + | chr5_3:39246649-39246668 | Msa0810640:intron | 20.0% |
| !! | GACTTATTTGGTATATAAAT+TGG | + | chr5_3:39246755-39246774 | Msa0810640:intron | 20.0% |
| !! | AAGATAAACTCAAAATCAAA+TGG | - | chr5_3:39246953-39246972 | None:intergenic | 20.0% |
| !!! | AAGTATTGAAATTGAAAGAT+TGG | + | chr5_3:39247882-39247901 | Msa0810640:CDS | 20.0% |
| !! | GGATTTGTATATTCTTTAAA+TGG | - | chr5_3:39247971-39247990 | None:intergenic | 20.0% |
| !! | TTTGAGTATCATATTAAAAG+GGG | + | chr5_3:39248229-39248248 | Msa0810640:intron | 20.0% |
| !!! | TACATCATATCTTAAGTTTT+TGG | + | chr5_3:39248324-39248343 | Msa0810640:intron | 20.0% |
| !!! | GTATTTTGGTAATTGAAAAT+TGG | + | chr5_3:39248409-39248428 | Msa0810640:intron | 20.0% |
| !!! | TCATTAGATAAGGTATTTTT+TGG | + | chr5_3:39248459-39248478 | Msa0810640:intron | 20.0% |
| !!! | ATAATTTTCTATCATCTGTT+TGG | + | chr5_3:39249006-39249025 | Msa0810640:intron | 20.0% |
| !! | GCAAAATGTGAAAAATAAAA+GGG | - | chr5_3:39249113-39249132 | None:intergenic | 20.0% |
| !! | AGCAAAATGTGAAAAATAAA+AGG | - | chr5_3:39249114-39249133 | None:intergenic | 20.0% |
| !!! | TTTTTCTATGTTGTTATTGT+TGG | + | chr5_3:39249212-39249231 | Msa0810640:intron | 20.0% |
| !! | ATTACTGATAGGAATTTATA+GGG | - | chr5_3:39249352-39249371 | None:intergenic | 20.0% |
| !! | AATTACTGATAGGAATTTAT+AGG | - | chr5_3:39249353-39249372 | None:intergenic | 20.0% |
| !! | ATGTAACTTAAATTACTGAT+AGG | - | chr5_3:39249363-39249382 | None:intergenic | 20.0% |
| !! | TACATTGTAATATGTTGTAT+TGG | + | chr5_3:39249633-39249652 | Msa0810640:CDS | 20.0% |
| !! | AAGTACGAAAATGATTTATA+GGG | - | chr5_3:39249760-39249779 | None:intergenic | 20.0% |
| !! | AAAGTACGAAAATGATTTAT+AGG | - | chr5_3:39249761-39249780 | None:intergenic | 20.0% |
| !! | TATTGAAACATATGATATGA+AGG | + | chr5_3:39250027-39250046 | Msa0810640:intron | 20.0% |
| !! | ATTGAAACATATGATATGAA+GGG | + | chr5_3:39250028-39250047 | Msa0810640:intron | 20.0% |
| !!! | TACTTATTTTGTTTGATTTG+TGG | + | chr5_3:39250340-39250359 | Msa0810640:intron | 20.0% |
| !!! | ATGGAAGTTATTTTTTAACT+AGG | - | chr5_3:39250885-39250904 | None:intergenic | 20.0% |
| !!! | ATAAGAAGTATAACAGAATA+TGG | - | chr5_3:39250904-39250923 | None:intergenic | 20.0% |
| !! | TTATATGGAAGTTAATTAAG+TGG | + | chr5_3:39251036-39251055 | Msa0810640:intron | 20.0% |
| !! | AAGTTAATTAAGTGGTTATT+GGG | + | chr5_3:39251044-39251063 | Msa0810640:intron | 20.0% |
| !! | AATATTATTGATCTAACCTT+AGG | - | chr5_3:39251186-39251205 | None:intergenic | 20.0% |
| !!! | TTTTTTTATACATATCAGTG+TGG | + | chr5_3:39251563-39251582 | Msa0810640:intron | 20.0% |
| !!! | TCATATCAACAGATTATTTT+TGG | + | chr5_3:39252135-39252154 | Msa0810640:intron | 20.0% |
| !! | GAAATGAAAGTGTAAAGAAA+TGG | - | chr5_3:39245185-39245204 | None:intergenic | 25.0% |
| !!! | TCTTTCTAGAATAGACATAA+TGG | - | chr5_3:39245367-39245386 | None:intergenic | 25.0% |
| ! | GATAAGAAGAACAACAATAA+AGG | + | chr5_3:39245523-39245542 | Msa0810640:CDS | 25.0% |
| ! | AAAAAGAAGAAGAAGAATCT+TGG | + | chr5_3:39245569-39245588 | Msa0810640:CDS | 25.0% |
| ! | TCTATTATTATTATGCACTG+TGG | + | chr5_3:39245683-39245702 | Msa0810640:intron | 25.0% |
| ! | ACTAACTATTCAATAAACAG+TGG | + | chr5_3:39245866-39245885 | Msa0810640:intron | 25.0% |
| ! | TCAATGTCAAAGAAATGATA+AGG | + | chr5_3:39245915-39245934 | Msa0810640:CDS | 25.0% |
| ! | CAATGTCAAAGAAATGATAA+GGG | + | chr5_3:39245916-39245935 | Msa0810640:CDS | 25.0% |
| ! | GTGTAGACTGTATAAAAAAT+TGG | + | chr5_3:39245980-39245999 | Msa0810640:CDS | 25.0% |
| !!! | TTATATCGTTTTTGTTGCTA+AGG | + | chr5_3:39246057-39246076 | Msa0810640:intron | 25.0% |
| ! | ACTACAGTCAATTAAAGAAA+AGG | + | chr5_3:39246265-39246284 | Msa0810640:intron | 25.0% |
| ! | AAACAAGTGACATAAATAAG+AGG | - | chr5_3:39246451-39246470 | None:intergenic | 25.0% |
| ! | ATGATATACACAATAACACA+AGG | + | chr5_3:39247290-39247309 | Msa0810640:CDS | 25.0% |
| ! | TGATATACACAATAACACAA+GGG | + | chr5_3:39247291-39247310 | Msa0810640:CDS | 25.0% |
| !!! | ATGATTTAGGACATTTTCAA+TGG | + | chr5_3:39247383-39247402 | Msa0810640:CDS | 25.0% |
| ! | ACATTAATATCTATCTGCAT+CGG | - | chr5_3:39247806-39247825 | None:intergenic | 25.0% |
| ! | TCTTTCAATTTCAATACTTG+AGG | - | chr5_3:39247881-39247900 | None:intergenic | 25.0% |
| ! | CTTTCTTCAAATAGTTTAGA+AGG | - | chr5_3:39247911-39247930 | None:intergenic | 25.0% |
| ! | TGTATATTCTTTAAATGGCA+AGG | - | chr5_3:39247966-39247985 | None:intergenic | 25.0% |
| ! | GAATATACAAATCCTTTCAA+AGG | + | chr5_3:39247977-39247996 | Msa0810640:CDS | 25.0% |
| !! | CCATAAGCAATATATGTTTT+TGG | - | chr5_3:39248058-39248077 | None:intergenic | 25.0% |
| ! | CCAAAAACATATATTGCTTA+TGG | + | chr5_3:39248055-39248074 | Msa0810640:CDS | 25.0% |
| !! | ATTTGAAATGCTATTTACCT+TGG | + | chr5_3:39248387-39248406 | Msa0810640:intron | 25.0% |
| ! | TTTCAATTACCAAAATACCA+AGG | - | chr5_3:39248407-39248426 | None:intergenic | 25.0% |
| ! | ATTAGTTGCATCATTAGATA+AGG | + | chr5_3:39248449-39248468 | Msa0810640:intron | 25.0% |
| !! | TGAAATATGAAAGATGGTTT+TGG | + | chr5_3:39248485-39248504 | Msa0810640:intron | 25.0% |
| ! | GCACAAACAAATAATTAATC+CGG | - | chr5_3:39248559-39248578 | None:intergenic | 25.0% |
| ! | GCTAAGAATTAAGTCAAATA+GGG | - | chr5_3:39249177-39249196 | None:intergenic | 25.0% |
| ! | AGCTAAGAATTAAGTCAAAT+AGG | - | chr5_3:39249178-39249197 | None:intergenic | 25.0% |
| ! | TACCTTGTAATATGTTCTAT+GGG | + | chr5_3:39249245-39249264 | Msa0810640:intron | 25.0% |
| ! | ATAAAAAATGCCCATAATGA+AGG | + | chr5_3:39249411-39249430 | Msa0810640:intron | 25.0% |
| !!! | TGAGTAGTTAGTTTTGAATA+CGG | + | chr5_3:39249965-39249984 | Msa0810640:intron | 25.0% |
| ! | TTTCAATTTCAAAGTTCACT+TGG | + | chr5_3:39250125-39250144 | Msa0810640:intron | 25.0% |
| ! | GTGTTGAATTGTTAACAAAA+TGG | - | chr5_3:39250388-39250407 | None:intergenic | 25.0% |
| !!! | GTGGATTTGTTTTATAATGA+AGG | + | chr5_3:39250526-39250545 | Msa0810640:intron | 25.0% |
| ! | TATTTAGCACTAATTCAACA+AGG | - | chr5_3:39250778-39250797 | None:intergenic | 25.0% |
| ! | ACATGAAAGAATTGGTTATA+TGG | + | chr5_3:39251021-39251040 | Msa0810640:intron | 25.0% |
| ! | GAAGTTAATTAAGTGGTTAT+TGG | + | chr5_3:39251043-39251062 | Msa0810640:intron | 25.0% |
| ! | AATAGGAATATGATACAAAC+TGG | - | chr5_3:39251240-39251259 | None:intergenic | 25.0% |
| ! | TCCTATTTAAACATTCCTAA+TGG | + | chr5_3:39251253-39251272 | Msa0810640:intron | 25.0% |
| ! | CCTATTTAAACATTCCTAAT+GGG | + | chr5_3:39251254-39251273 | Msa0810640:intron | 25.0% |
| ! | CTATTTAAACATTCCTAATG+GGG | + | chr5_3:39251255-39251274 | Msa0810640:intron | 25.0% |
| ! | TATTTAAACATTCCTAATGG+GGG | + | chr5_3:39251256-39251275 | Msa0810640:intron | 25.0% |
| ! | TGATATCTTAGTATTTAGCT+TGG | + | chr5_3:39251465-39251484 | Msa0810640:intron | 25.0% |
| ! | TAATCAAATCCATAATAGTC+AGG | - | chr5_3:39251809-39251828 | None:intergenic | 25.0% |
| ! | TGGATTTGATTATTCTGTTT+AGG | + | chr5_3:39251817-39251836 | Msa0810640:intron | 25.0% |
| ! | GGATTTGATTATTCTGTTTA+GGG | + | chr5_3:39251818-39251837 | Msa0810640:intron | 25.0% |
| ! | ACTCTTTACTAGATTCTATA+TGG | - | chr5_3:39251973-39251992 | None:intergenic | 25.0% |
| ! | AAACTACAATACTACTAGAT+AGG | - | chr5_3:39252019-39252038 | None:intergenic | 25.0% |
| !!! | GTAGTTTTAATGTAAAGACA+AGG | + | chr5_3:39252032-39252051 | Msa0810640:intron | 25.0% |
| !! | CTAGAATAGACATAATGGAT+AGG | - | chr5_3:39245362-39245381 | None:intergenic | 30.0% |
| TTCCATGTAATTGTATGTGT+TGG | + | chr5_3:39245788-39245807 | Msa0810640:intron | 30.0% | |
| ! | ATATCTTTTCCGTTTGCATT+TGG | - | chr5_3:39245959-39245978 | None:intergenic | 30.0% |
| ACAGTCAATTAAAGAAAAGG+AGG | + | chr5_3:39246268-39246287 | Msa0810640:intron | 30.0% | |
| TCTTCCACATTTAATACGAT+TGG | + | chr5_3:39246346-39246365 | Msa0810640:CDS | 30.0% | |
| TGATCCAATCGTATTAAATG+TGG | - | chr5_3:39246353-39246372 | None:intergenic | 30.0% | |
| GGAAAAAATACCTTGTAACT+TGG | - | chr5_3:39246405-39246424 | None:intergenic | 30.0% | |
| !!! | TATGTCACTTGTTTTTTCCA+TGG | + | chr5_3:39246457-39246476 | Msa0810640:intron | 30.0% |
| AAGTTATCGAAGAGAAAGAA+AGG | - | chr5_3:39246500-39246519 | None:intergenic | 30.0% | |
| AGTCATTAACAATGTAGCAT+TGG | - | chr5_3:39246798-39246817 | None:intergenic | 30.0% | |
| ! | TCACATTTAATCTCAGGTTT+TGG | - | chr5_3:39247115-39247134 | None:intergenic | 30.0% |
| ! | AAAATACGCTTTTCAGTTCA+AGG | - | chr5_3:39247147-39247166 | None:intergenic | 30.0% |
| CTTTGCTTTACATACTAACT+CGG | - | chr5_3:39247185-39247204 | None:intergenic | 30.0% | |
| ATATCATCTCTATTCCTAAC+AGG | - | chr5_3:39247277-39247296 | None:intergenic | 30.0% | |
| AATGTACTTGAATGTACATC+TGG | + | chr5_3:39247439-39247458 | Msa0810640:CDS | 30.0% | |
| AAACAGAAAAACAGAAAGCA+GGG | - | chr5_3:39247671-39247690 | None:intergenic | 30.0% | |
| AAAGAAAATGAACACAACTG+GGG | - | chr5_3:39247708-39247727 | None:intergenic | 30.0% | |
| GAAAGAAAATGAACACAACT+GGG | - | chr5_3:39247709-39247728 | None:intergenic | 30.0% | |
| TGAAAGAAAATGAACACAAC+TGG | - | chr5_3:39247710-39247729 | None:intergenic | 30.0% | |
| AGAAGTTACAAGCAACTTAT+AGG | - | chr5_3:39247762-39247781 | None:intergenic | 30.0% | |
| TCTTCAAATAGTTTAGAAGG+AGG | - | chr5_3:39247908-39247927 | None:intergenic | 30.0% | |
| ! | TAAATTCTCTGAGTTTTTCC+TGG | + | chr5_3:39248149-39248168 | Msa0810640:intron | 30.0% |
| ! | TTAAAAGGGGCATAATTTGT+AGG | + | chr5_3:39248242-39248261 | Msa0810640:intron | 30.0% |
| !! | TGCTATTTACCTTGGTATTT+TGG | + | chr5_3:39248395-39248414 | Msa0810640:intron | 30.0% |
| ! | TGGTCTTGAAATATGAAAGA+TGG | + | chr5_3:39248479-39248498 | Msa0810640:intron | 30.0% |
| CAGTTCTTTACTCTATTATG+AGG | + | chr5_3:39248648-39248667 | Msa0810640:intron | 30.0% | |
| ! | CAACAAACTATTTTCAACAG+TGG | - | chr5_3:39248842-39248861 | None:intergenic | 30.0% |
| ! | CACTGTTGAAAATAGTTTGT+TGG | + | chr5_3:39248840-39248859 | Msa0810640:CDS | 30.0% |
| !! | GTTGAAAATAGTTTGTTGGT+TGG | + | chr5_3:39248844-39248863 | Msa0810640:CDS | 30.0% |
| !! | AAAATAGTTTGTTGGTTGGT+GGG | + | chr5_3:39248848-39248867 | Msa0810640:CDS | 30.0% |
| ATTAATGACTCCAGTTAACA+GGG | - | chr5_3:39249037-39249056 | None:intergenic | 30.0% | |
| GTACCTTGTAATATGTTCTA+TGG | + | chr5_3:39249244-39249263 | Msa0810640:intron | 30.0% | |
| ACCTTGTAATATGTTCTATG+GGG | + | chr5_3:39249246-39249265 | Msa0810640:intron | 30.0% | |
| ! | ACCCAAATCTCTCTTTTTAT+AGG | + | chr5_3:39249589-39249608 | Msa0810640:intron | 30.0% |
| CCCTATAAAAAGAGAGATTT+GGG | - | chr5_3:39249593-39249612 | None:intergenic | 30.0% | |
| ! | CCCAAATCTCTCTTTTTATA+GGG | + | chr5_3:39249590-39249609 | Msa0810640:intron | 30.0% |
| ACCCTATAAAAAGAGAGATT+TGG | - | chr5_3:39249594-39249613 | None:intergenic | 30.0% | |
| ! | TAATATGTTGTATTGGTCCT+TGG | + | chr5_3:39249640-39249659 | Msa0810640:CDS | 30.0% |
| GAGAAAACAAGAGATAATGA+AGG | - | chr5_3:39249842-39249861 | None:intergenic | 30.0% | |
| ACAAAATTCCATACTCATGA+TGG | - | chr5_3:39249992-39250011 | None:intergenic | 30.0% | |
| ! | AATTTTGTTGATGCGAATAG+CGG | + | chr5_3:39250004-39250023 | Msa0810640:intron | 30.0% |
| ATATGAAGGGAAATGCATAA+TGG | + | chr5_3:39250041-39250060 | Msa0810640:intron | 30.0% | |
| TGAAAGAACATCTACTGAAT+CGG | - | chr5_3:39250092-39250111 | None:intergenic | 30.0% | |
| GATTCTTTATGTAGATGACT+TGG | + | chr5_3:39250159-39250178 | Msa0810640:intron | 30.0% | |
| ! | TTTTTGAATGACATCTCCTT+TGG | + | chr5_3:39250217-39250236 | Msa0810640:intron | 30.0% |
| TGAATAACCTATAATGCCAA+AGG | - | chr5_3:39250236-39250255 | None:intergenic | 30.0% | |
| TTAGATAAAAGGTCTGATCA+TGG | - | chr5_3:39250265-39250284 | None:intergenic | 30.0% | |
| ! | CAAGTTTTACCTTCAGATTT+CGG | - | chr5_3:39250498-39250517 | None:intergenic | 30.0% |
| TTCTCAAACTTTCAAGAACT+TGG | - | chr5_3:39250718-39250737 | None:intergenic | 30.0% | |
| AATACCAGTATACAACTACT+AGG | - | chr5_3:39250744-39250763 | None:intergenic | 30.0% | |
| AAGACTAAATGCTAATTCCT+AGG | + | chr5_3:39250837-39250856 | Msa0810640:intron | 30.0% | |
| GTTGTAATAATGTTCTACCT+AGG | - | chr5_3:39250857-39250876 | None:intergenic | 30.0% | |
| GGTAGAACATTATTACAACA+AGG | + | chr5_3:39250858-39250877 | Msa0810640:intron | 30.0% | |
| TAGGAGATTTCTTAGTTAGT+TGG | + | chr5_3:39250939-39250958 | Msa0810640:intron | 30.0% | |
| TTATTACTATCTGTGTGTGT+CGG | + | chr5_3:39250980-39250999 | Msa0810640:intron | 30.0% | |
| CCCATTAGGAATGTTTAAAT+AGG | - | chr5_3:39251257-39251276 | None:intergenic | 30.0% | |
| !!! | GCTAGTTTTGTGATTTGATT+AGG | - | chr5_3:39251333-39251352 | None:intergenic | 30.0% |
| ! | ATGGCTTGAAGTATTTATGT+GGG | - | chr5_3:39251375-39251394 | None:intergenic | 30.0% |
| ! | TATGGCTTGAAGTATTTATG+TGG | - | chr5_3:39251376-39251395 | None:intergenic | 30.0% |
| GCTAAATACTAAGATATCAG+AGG | - | chr5_3:39251464-39251483 | None:intergenic | 30.0% | |
| GGTAATCTGTAAGAAATTGT+AGG | - | chr5_3:39251598-39251617 | None:intergenic | 30.0% | |
| ! | TATTCTGTTTAGGGTTGATT+AGG | + | chr5_3:39251827-39251846 | Msa0810640:intron | 30.0% |
| ! | CTTTCAGTTACACCTATTTT+TGG | + | chr5_3:39251852-39251871 | Msa0810640:intron | 30.0% |
| TCAAATCTCTGAACATTTGT+TGG | + | chr5_3:39251895-39251914 | Msa0810640:intron | 30.0% | |
| AATCTGTTGATATGACATGA+TGG | - | chr5_3:39252130-39252149 | None:intergenic | 30.0% | |
| ATTAAAAAATGGCGTTTGCG+AGG | + | chr5_3:39245288-39245307 | Msa0810640:exon | 35.0% | |
| TTAAAAAATGGCGTTTGCGA+GGG | + | chr5_3:39245289-39245308 | Msa0810640:exon | 35.0% | |
| !! | GAATAGACATAATGGATAGG+AGG | - | chr5_3:39245359-39245378 | None:intergenic | 35.0% |
| TTTCTTCTTGTCTACCAAGA+CGG | - | chr5_3:39245552-39245571 | None:intergenic | 35.0% | |
| AAGAAGAAGAATCTTGGTGA+TGG | + | chr5_3:39245575-39245594 | Msa0810640:CDS | 35.0% | |
| ACAATTTCTCCAAAGAAACC+CGG | + | chr5_3:39245620-39245639 | Msa0810640:CDS | 35.0% | |
| ! | TTTCTTTTTCCGGGTTTCTT+TGG | - | chr5_3:39245632-39245651 | None:intergenic | 35.0% |
| ! | AGGAGTCTGTTTTCTTTTTC+CGG | - | chr5_3:39245642-39245661 | None:intergenic | 35.0% |
| AAAACAGACTCCTCACAATA+AGG | + | chr5_3:39245649-39245668 | Msa0810640:CDS | 35.0% | |
| CACCAACACATACAATTACA+TGG | - | chr5_3:39245793-39245812 | None:intergenic | 35.0% | |
| ! | GTAATTGTATGTGTTGGTGT+CGG | + | chr5_3:39245794-39245813 | Msa0810640:intron | 35.0% |
| AGTTAGTCACTCATCAGATT+AGG | - | chr5_3:39245849-39245868 | None:intergenic | 35.0% | |
| !! | CAATAAACAGTGGATTGAAG+AGG | + | chr5_3:39245876-39245895 | Msa0810640:intron | 35.0% |
| TCAAAGAAATGATAAGGGCA+GGG | + | chr5_3:39245921-39245940 | Msa0810640:CDS | 35.0% | |
| AATTGTTCCTCTTTCAATCG+AGG | - | chr5_3:39246086-39246105 | None:intergenic | 35.0% | |
| GTCAATTAAAGAAAAGGAGG+AGG | + | chr5_3:39246271-39246290 | Msa0810640:intron | 35.0% | |
| !! | AAGAGCTTTGAGCATATACT+TGG | - | chr5_3:39246327-39246346 | None:intergenic | 35.0% |
| ACGATTGGATCAAGAACAAA+TGG | + | chr5_3:39246361-39246380 | Msa0810640:CDS | 35.0% | |
| AGACAAAAAAGCAAGAAGAG+AGG | - | chr5_3:39246426-39246445 | None:intergenic | 35.0% | |
| CAGGAAAAATAGTGTAAAGC+AGG | - | chr5_3:39246539-39246558 | None:intergenic | 35.0% | |
| ! | CATAAACAAAAAGCACATGC+AGG | - | chr5_3:39246558-39246577 | None:intergenic | 35.0% |
| TTGTATTTCGTCTCATGTGT+CGG | + | chr5_3:39246586-39246605 | Msa0810640:intron | 35.0% | |
| !!! | GATTTTGAGTTTATCTTCCG+AGG | + | chr5_3:39246956-39246975 | Msa0810640:CDS | 35.0% |
| CTTCACCATGCAGATAATTT+GGG | - | chr5_3:39246982-39247001 | None:intergenic | 35.0% | |
| ACTTCACCATGCAGATAATT+TGG | - | chr5_3:39246983-39247002 | None:intergenic | 35.0% | |
| !!! | TTAATCTCAGGTTTTGGACA+GGG | - | chr5_3:39247109-39247128 | None:intergenic | 35.0% |
| !!! | TTTAATCTCAGGTTTTGGAC+AGG | - | chr5_3:39247110-39247129 | None:intergenic | 35.0% |
| CCTGAGATTAAATGTGATCA+CGG | + | chr5_3:39247118-39247137 | Msa0810640:CDS | 35.0% | |
| CGAGTTAGTATGTAAAGCAA+AGG | + | chr5_3:39247183-39247202 | Msa0810640:CDS | 35.0% | |
| AATGAAACTTCAAGATGCAG+AGG | + | chr5_3:39247219-39247238 | Msa0810640:CDS | 35.0% | |
| ! | CAACTTTTTGTACTGTCCTA+GGG | + | chr5_3:39247342-39247361 | Msa0810640:CDS | 35.0% |
| GATCTTCATCACGATGATTT+AGG | + | chr5_3:39247370-39247389 | Msa0810640:CDS | 35.0% | |
| AGTACATTGCTGACAATTAC+AGG | - | chr5_3:39247427-39247446 | None:intergenic | 35.0% | |
| ! | AATGTACATCTGGTTTAAGC+TGG | + | chr5_3:39247449-39247468 | Msa0810640:CDS | 35.0% |
| ! | ATGTACATCTGGTTTAAGCT+GGG | + | chr5_3:39247450-39247469 | Msa0810640:CDS | 35.0% |
| !! | GAACAAGAACAAGTCACTTT+TGG | + | chr5_3:39247513-39247532 | Msa0810640:CDS | 35.0% |
| !!! | CAAGTCACTTTTGGATGTTA+AGG | + | chr5_3:39247522-39247541 | Msa0810640:CDS | 35.0% |
| AACAGAAAAACAGAAAGCAG+GGG | - | chr5_3:39247670-39247689 | None:intergenic | 35.0% | |
| GAAACAGAAAAACAGAAAGC+AGG | - | chr5_3:39247672-39247691 | None:intergenic | 35.0% | |
| AATGTGCACCAATTCTTTAC+TGG | + | chr5_3:39247821-39247840 | Msa0810640:CDS | 35.0% | |
| ATGTGCACCAATTCTTTACT+GGG | + | chr5_3:39247822-39247841 | Msa0810640:CDS | 35.0% | |
| TTGTGTACCCAGTAAAGAAT+TGG | - | chr5_3:39247832-39247851 | None:intergenic | 35.0% | |
| GTCCCAAGGATAATCATAAT+TGG | + | chr5_3:39247855-39247874 | Msa0810640:CDS | 35.0% | |
| GGCCAATTATGATTATCCTT+GGG | - | chr5_3:39247860-39247879 | None:intergenic | 35.0% | |
| AGGCCAATTATGATTATCCT+TGG | - | chr5_3:39247861-39247880 | None:intergenic | 35.0% | |
| !! | TATTGCTTATGGATTTGCTG+AGG | + | chr5_3:39248066-39248085 | Msa0810640:CDS | 35.0% |
| ! | CATTCTAGAAAAAACAGTCC+AGG | - | chr5_3:39248170-39248189 | None:intergenic | 35.0% |
| ACTATCAGCTCTTAATGCAA+TGG | - | chr5_3:39248290-39248309 | None:intergenic | 35.0% | |
| CATCAGATGAATTGTCTTTC+CGG | + | chr5_3:39248537-39248556 | Msa0810640:intron | 35.0% | |
| TCATATTGCTGAAGCAAAAC+TGG | + | chr5_3:39248723-39248742 | Msa0810640:CDS | 35.0% | |
| !! | GAAAATAGTTTGTTGGTTGG+TGG | + | chr5_3:39248847-39248866 | Msa0810640:CDS | 35.0% |
| !! | AAATAGTTTGTTGGTTGGTG+GGG | + | chr5_3:39248849-39248868 | Msa0810640:CDS | 35.0% |
| !!! | GTGCTCTTTGGGATATTTTT+CGG | + | chr5_3:39248884-39248903 | Msa0810640:CDS | 35.0% |
| TTAATGACTCCAGTTAACAG+GGG | - | chr5_3:39249036-39249055 | None:intergenic | 35.0% | |
| CATTAATGACTCCAGTTAAC+AGG | - | chr5_3:39249038-39249057 | None:intergenic | 35.0% | |
| TTCACAGCAGCAAAACTAAT+CGG | - | chr5_3:39249075-39249094 | None:intergenic | 35.0% | |
| ! | TTTTTCACATTTTGCTGCCA+CGG | + | chr5_3:39249118-39249137 | Msa0810640:intron | 35.0% |
| TAGGTGAGACTAAACTATGA+AGG | - | chr5_3:39249272-39249291 | None:intergenic | 35.0% | |
| AAGGTCTCTACAAAAAGAGT+GGG | - | chr5_3:39249513-39249532 | None:intergenic | 35.0% | |
| TAAGTTCTGCCTAGCTTAAA+AGG | + | chr5_3:39249687-39249706 | Msa0810640:intron | 35.0% | |
| !!! | TTATCTCTTGTTTTCTCAGC+TGG | + | chr5_3:39249845-39249864 | Msa0810640:intron | 35.0% |
| GGTGATTACTTACATCTGTT+AGG | + | chr5_3:39249866-39249885 | Msa0810640:intron | 35.0% | |
| TAAAAGGTCTGATCATGGAT+GGG | - | chr5_3:39250260-39250279 | None:intergenic | 35.0% | |
| ATAAAAGGTCTGATCATGGA+TGG | - | chr5_3:39250261-39250280 | None:intergenic | 35.0% | |
| ! | CAGACCTTTTATCTAACCAT+CGG | + | chr5_3:39250269-39250288 | Msa0810640:CDS | 35.0% |
| ! | AGACCTTTTATCTAACCATC+GGG | + | chr5_3:39250270-39250289 | Msa0810640:CDS | 35.0% |
| AAAAAGCTGAAGGAAGAGTA+TGG | + | chr5_3:39250299-39250318 | Msa0810640:CDS | 35.0% | |
| TTTGTGGAGTGTAGATCAAT+AGG | + | chr5_3:39250356-39250375 | Msa0810640:intron | 35.0% | |
| TTGTGGAGTGTAGATCAATA+GGG | + | chr5_3:39250357-39250376 | Msa0810640:intron | 35.0% | |
| !! | TTCAACACTGACTTGTATGT+AGG | + | chr5_3:39250400-39250419 | Msa0810640:intron | 35.0% |
| TCTACACTTCTTAGCAAACA+AGG | - | chr5_3:39250562-39250581 | None:intergenic | 35.0% | |
| ATGTCCTAGTAGTTGTATAC+TGG | + | chr5_3:39250737-39250756 | Msa0810640:intron | 35.0% | |
| TGGGAAAGACATGAAAGAAT+TGG | + | chr5_3:39251013-39251032 | Msa0810640:intron | 35.0% | |
| GTTATTGGGACTCAAAATCA+TGG | + | chr5_3:39251058-39251077 | Msa0810640:intron | 35.0% | |
| TATATGAATCCCTTCTCCTA+AGG | + | chr5_3:39251167-39251186 | Msa0810640:intron | 35.0% | |
| TTGATCTAACCTTAGGAGAA+GGG | - | chr5_3:39251179-39251198 | None:intergenic | 35.0% | |
| ATTGATCTAACCTTAGGAGA+AGG | - | chr5_3:39251180-39251199 | None:intergenic | 35.0% | |
| AATTCTATGCTCACATCCAT+AGG | - | chr5_3:39251301-39251320 | None:intergenic | 35.0% | |
| ATCTAGACGTCTAGATGATA+TGG | - | chr5_3:39251394-39251413 | None:intergenic | 35.0% | |
| CATTAACTTCAGTGACTCAT+TGG | - | chr5_3:39251503-39251522 | None:intergenic | 35.0% | |
| GAGCTAGTGAGTAATTGATT+GGG | - | chr5_3:39251619-39251638 | None:intergenic | 35.0% | |
| TGAGCTAGTGAGTAATTGAT+TGG | - | chr5_3:39251620-39251639 | None:intergenic | 35.0% | |
| TTTGTCTCTCCTGAAAATGT+TGG | + | chr5_3:39251705-39251724 | Msa0810640:CDS | 35.0% | |
| TGTGATTTACTGGAAGTTTG+CGG | - | chr5_3:39251758-39251777 | None:intergenic | 35.0% | |
| AACATGACAGTGCCAAAAAT+AGG | - | chr5_3:39251867-39251886 | None:intergenic | 35.0% | |
| ! | AATCTCTGAACATTTGTTGG+TGG | + | chr5_3:39251898-39251917 | Msa0810640:intron | 35.0% |
| !! | ATTGCTGCTTCTTTTGTAAC+AGG | + | chr5_3:39252182-39252201 | Msa0810640:intron | 35.0% |
| CGTATATGCTATGATTGATG+TGG | + | chr5_3:39252218-39252237 | Msa0810640:CDS | 35.0% | |
| GATTGATGTGGTCAAAAAGT+TGG | + | chr5_3:39252230-39252249 | Msa0810640:CDS | 35.0% | |
| TCAAAAAGTTGGAGAAAGCA+AGG | + | chr5_3:39252241-39252260 | Msa0810640:CDS | 35.0% | |
| ATTTCAAATGCAGCAGCAGT+GGG | - | chr5_3:39245259-39245278 | None:intergenic | 40.0% | |
| AATTTCAAATGCAGCAGCAG+TGG | - | chr5_3:39245260-39245279 | None:intergenic | 40.0% | |
| CAACAACAACACATTCACGA+CGG | + | chr5_3:39245322-39245341 | Msa0810640:CDS | 40.0% | |
| AACAACAACACATTCACGAC+GGG | + | chr5_3:39245323-39245342 | Msa0810640:CDS | 40.0% | |
| GAACAACAACAACAAACCAC+CGG | + | chr5_3:39245437-39245456 | Msa0810640:CDS | 40.0% | |
| TTGACTCTTTCGAACAGCAA+CGG | - | chr5_3:39245501-39245520 | None:intergenic | 40.0% | |
| ! | TTGCTGTTCGAAAGAGTCAA+CGG | + | chr5_3:39245501-39245520 | Msa0810640:CDS | 40.0% |
| TTCTTCTTGTCTACCAAGAC+GGG | - | chr5_3:39245551-39245570 | None:intergenic | 40.0% | |
| !! | AAGAATCTTGGTGATGGTGA+TGG | + | chr5_3:39245581-39245600 | Msa0810640:CDS | 40.0% |
| ! | GGAGTCTGTTTTCTTTTTCC+GGG | - | chr5_3:39245641-39245660 | None:intergenic | 40.0% |
| GATGTTGTGACCTTATTGTG+AGG | - | chr5_3:39245662-39245681 | None:intergenic | 40.0% | |
| GTCAAAGAAATGATAAGGGC+AGG | + | chr5_3:39245920-39245939 | Msa0810640:CDS | 40.0% | |
| TCAGATGCACCAAATGCAAA+CGG | + | chr5_3:39245947-39245966 | Msa0810640:CDS | 40.0% | |
| ! | AAGGTATCCTCGATTGAAAG+AGG | + | chr5_3:39246076-39246095 | Msa0810640:intron | 40.0% |
| !! | GAAAGAGGAACAATTTGCTG+AGG | + | chr5_3:39246091-39246110 | Msa0810640:CDS | 40.0% |
| ! | GCAAAGCTTGTTTGAAGTCA+CGG | + | chr5_3:39246144-39246163 | Msa0810640:CDS | 40.0% |
| GAGATAGAAGCCAAGTTACA+AGG | + | chr5_3:39246392-39246411 | Msa0810640:CDS | 40.0% | |
| !! | GATTTTGGTATCAACGTTGC+AGG | + | chr5_3:39246664-39246683 | Msa0810640:intron | 40.0% |
| TACATGCGCTCATCATTATG+GGG | - | chr5_3:39246727-39246746 | None:intergenic | 40.0% | |
| GTACATGCGCTCATCATTAT+GGG | - | chr5_3:39246728-39246747 | None:intergenic | 40.0% | |
| AGTACATGCGCTCATCATTA+TGG | - | chr5_3:39246729-39246748 | None:intergenic | 40.0% | |
| ATAATGATGAGCGCATGTAC+TGG | + | chr5_3:39246728-39246747 | Msa0810640:CDS | 40.0% | |
| ! | TGTACTGGTAGGGACTTATT+TGG | + | chr5_3:39246743-39246762 | Msa0810640:intron | 40.0% |
| TTATCTGCATGGTGAAGTTG+CGG | + | chr5_3:39246985-39247004 | Msa0810640:CDS | 40.0% | |
| ATTCCTACGTGGTCAAAATC+TGG | + | chr5_3:39247055-39247074 | Msa0810640:CDS | 40.0% | |
| TTCCTACGTGGTCAAAATCT+GGG | + | chr5_3:39247056-39247075 | Msa0810640:CDS | 40.0% | |
| CCGTGATCACATTTAATCTC+AGG | - | chr5_3:39247121-39247140 | None:intergenic | 40.0% | |
| ! | GCTCTTGTTTGAATCCTGTT+AGG | + | chr5_3:39247260-39247279 | Msa0810640:CDS | 40.0% |
| AGCTCTTTGCAAAGAATCCA+GGG | + | chr5_3:39247318-39247337 | Msa0810640:CDS | 40.0% | |
| ! | GCAACTTTTTGTACTGTCCT+AGG | + | chr5_3:39247341-39247360 | Msa0810640:CDS | 40.0% |
| ! | TAGGACATTTTCAATGGCAC+TGG | + | chr5_3:39247389-39247408 | Msa0810640:CDS | 40.0% |
| AGGCACTTGATTGCTTAGAT+TGG | + | chr5_3:39247542-39247561 | Msa0810640:CDS | 40.0% | |
| TGATCTTTGAGCTTCTCATG+CGG | + | chr5_3:39247617-39247636 | Msa0810640:intron | 40.0% | |
| !! | TCTGGCTTTAGAACTTCATC+AGG | - | chr5_3:39248028-39248047 | None:intergenic | 40.0% |
| !! | TGAAGTTCTAAAGCCAGACA+TGG | + | chr5_3:39248030-39248049 | Msa0810640:CDS | 40.0% |
| !! | GAAGTTCTAAAGCCAGACAT+GGG | + | chr5_3:39248031-39248050 | Msa0810640:CDS | 40.0% |
| !!! | TATGTTTTTGGTCCCATGTC+TGG | - | chr5_3:39248046-39248065 | None:intergenic | 40.0% |
| GATGTATACGATGCCTTTGT+AGG | + | chr5_3:39248264-39248283 | Msa0810640:intron | 40.0% | |
| CTTAATGCAATGGCCTACAA+AGG | - | chr5_3:39248280-39248299 | None:intergenic | 40.0% | |
| CGGAAAGACAATTCATCTGA+TGG | - | chr5_3:39248539-39248558 | None:intergenic | 40.0% | |
| CTGAAGCAAAACTGGATAGT+GGG | + | chr5_3:39248731-39248750 | Msa0810640:CDS | 40.0% | |
| CTACATGGTGATATTCAGGA+TGG | + | chr5_3:39248811-39248830 | Msa0810640:CDS | 40.0% | |
| ATTCCTTAGATGGTGCTCTT+TGG | + | chr5_3:39248872-39248891 | Msa0810640:CDS | 40.0% | |
| TTCCTTAGATGGTGCTCTTT+GGG | + | chr5_3:39248873-39248892 | Msa0810640:CDS | 40.0% | |
| !! | TTGGGATATTTTTCGGAGAG+AGG | + | chr5_3:39248891-39248910 | Msa0810640:CDS | 40.0% |
| TTCAGATATTCCTGCAATGC+AGG | - | chr5_3:39248922-39248941 | None:intergenic | 40.0% | |
| !! | AGAAGCATTTCAGAGAGTTC+AGG | + | chr5_3:39248941-39248960 | Msa0810640:CDS | 40.0% |
| ACTAACTTTACCTCCTCTAC+AGG | - | chr5_3:39248982-39249001 | None:intergenic | 40.0% | |
| TAATGACTCCAGTTAACAGG+GGG | - | chr5_3:39249035-39249054 | None:intergenic | 40.0% | |
| TGTCAACTTTATCATGTCCG+TGG | - | chr5_3:39249138-39249157 | None:intergenic | 40.0% | |
| GCCCCATAGAACATATTACA+AGG | - | chr5_3:39249250-39249269 | None:intergenic | 40.0% | |
| !! | TTAGTCTCACCTAGCTTTGA+AGG | + | chr5_3:39249279-39249298 | Msa0810640:intron | 40.0% |
| CTGCAGGATACCTTCATTAT+GGG | - | chr5_3:39249424-39249443 | None:intergenic | 40.0% | |
| ACTGCAGGATACCTTCATTA+TGG | - | chr5_3:39249425-39249444 | None:intergenic | 40.0% | |
| CAAGGTCTCTACAAAAAGAG+TGG | - | chr5_3:39249514-39249533 | None:intergenic | 40.0% | |
| AGAACTTACCAATGTGTTGC+AGG | - | chr5_3:39249675-39249694 | None:intergenic | 40.0% | |
| ! | TAGGGAAGTGCAATCTGTTA+TGG | - | chr5_3:39249742-39249761 | None:intergenic | 40.0% |
| ATTACCAGCTTGATCATTCG+AGG | - | chr5_3:39249933-39249952 | None:intergenic | 40.0% | |
| AATACGGACCATCATGAGTA+TGG | + | chr5_3:39249981-39250000 | Msa0810640:intron | 40.0% | |
| GATGTAATTTCCAGTCCCTT+AGG | + | chr5_3:39250063-39250082 | Msa0810640:intron | 40.0% | |
| AAAGTTCACTTGGCAGTAGA+CGG | + | chr5_3:39250135-39250154 | Msa0810640:intron | 40.0% | |
| GACATCTCCTTTGGCATTAT+AGG | + | chr5_3:39250226-39250245 | Msa0810640:intron | 40.0% | |
| AAAAGGTCTGATCATGGATG+GGG | - | chr5_3:39250259-39250278 | None:intergenic | 40.0% | |
| ATGCCCGATGGTTAGATAAA+AGG | - | chr5_3:39250276-39250295 | None:intergenic | 40.0% | |
| !! | TGTATGTAGGTATTGAGCCT+TGG | + | chr5_3:39250413-39250432 | Msa0810640:intron | 40.0% |
| AGCTTCTGAACAAAAGTCCA+AGG | - | chr5_3:39250433-39250452 | None:intergenic | 40.0% | |
| ! | TGGACTTTTGTTCAGAAGCT+TGG | + | chr5_3:39250433-39250452 | Msa0810640:CDS | 40.0% |
| ! | GATGCAATTTTCATTCCAGC+AGG | + | chr5_3:39250457-39250476 | Msa0810640:CDS | 40.0% |
| TTACCTTCAGATTTCGGACT+TGG | - | chr5_3:39250492-39250511 | None:intergenic | 40.0% | |
| GAAGGTAAAACTTGCGTACA+TGG | + | chr5_3:39250504-39250523 | Msa0810640:intron | 40.0% | |
| !! | TGTGTGTCGGTTATGTAAAG+TGG | + | chr5_3:39250993-39251012 | Msa0810640:intron | 40.0% |
| !! | GTGTGTCGGTTATGTAAAGT+GGG | + | chr5_3:39250994-39251013 | Msa0810640:intron | 40.0% |
| GAACAGGAACACACTTAACA+GGG | - | chr5_3:39251102-39251121 | None:intergenic | 40.0% | |
| AGAACAGGAACACACTTAAC+AGG | - | chr5_3:39251103-39251122 | None:intergenic | 40.0% | |
| GTTACAAGACAAGACAGAAC+AGG | - | chr5_3:39251118-39251137 | None:intergenic | 40.0% | |
| TTAAACATTCCTAATGGGGG+AGG | + | chr5_3:39251259-39251278 | Msa0810640:intron | 40.0% | |
| TAAACATTCCTAATGGGGGA+GGG | + | chr5_3:39251260-39251279 | Msa0810640:intron | 40.0% | |
| TCTAGATCGTTACTCGAGTA+GGG | + | chr5_3:39251407-39251426 | Msa0810640:intron | 40.0% | |
| GAGGCTATGCTATATCCATT+TGG | - | chr5_3:39251445-39251464 | None:intergenic | 40.0% | |
| !! | CATTTTTCAGTCATGCACCA+AGG | + | chr5_3:39251671-39251690 | Msa0810640:intron | 40.0% |
| GACAAAATCAAGTGCAACCT+TGG | - | chr5_3:39251691-39251710 | None:intergenic | 40.0% | |
| ! | AAGCACTCACCAACATTTTC+AGG | - | chr5_3:39251717-39251736 | None:intergenic | 40.0% |
| GCAAACTTCCAGTAAATCAC+AGG | + | chr5_3:39251757-39251776 | Msa0810640:CDS | 40.0% | |
| TCTATGGACCTGTGATTTAC+TGG | - | chr5_3:39251768-39251787 | None:intergenic | 40.0% | |
| AGTAAATCACAGGTCCATAG+AGG | + | chr5_3:39251767-39251786 | Msa0810640:CDS | 40.0% | |
| TACCTCCAATTTGTCCTCTA+TGG | - | chr5_3:39251784-39251803 | None:intergenic | 40.0% | |
| TAAAGAAATGGGTGACCGAC+CGG | - | chr5_3:39245173-39245192 | None:intergenic | 45.0% | |
| ACAACAACACATTCACGACG+GGG | + | chr5_3:39245324-39245343 | Msa0810640:CDS | 45.0% | |
| AAAGAGACTCCGAACAAACG+CGG | + | chr5_3:39245382-39245401 | Msa0810640:CDS | 45.0% | |
| AAACCACCGGTAAACGTAAC+CGG | + | chr5_3:39245450-39245469 | Msa0810640:CDS | 45.0% | |
| ! | GGTTTTCCGGTTACGTTTAC+CGG | - | chr5_3:39245459-39245478 | None:intergenic | 45.0% |
| !!! | AAGCAGCTTCATCGGTTTTC+CGG | - | chr5_3:39245472-39245491 | None:intergenic | 45.0% |
| GGAAGAAGAAGCAGCTTCAT+CGG | - | chr5_3:39245480-39245499 | None:intergenic | 45.0% | |
| AACAATAAAGGCTCCCGTCT+TGG | + | chr5_3:39245535-39245554 | Msa0810640:CDS | 45.0% | |
| CTCATCAGATTAGGTGTGTC+CGG | - | chr5_3:39245840-39245859 | None:intergenic | 45.0% | |
| GGAAACCAACGATCATCATC+AGG | + | chr5_3:39246292-39246311 | Msa0810640:CDS | 45.0% | |
| ! | CTCAACCTGATGATGATCGT+TGG | - | chr5_3:39246300-39246319 | None:intergenic | 45.0% |
| TCAAGAACAAATGGCCGAGA+AGG | + | chr5_3:39246370-39246389 | Msa0810640:CDS | 45.0% | |
| CTTGGCTTCTATCTCCTTCT+CGG | - | chr5_3:39246387-39246406 | None:intergenic | 45.0% | |
| AGCATTCTGTGCAGCTTCTA+TGG | - | chr5_3:39246865-39246884 | None:intergenic | 45.0% | |
| CATGCAGATAATTTGGGCCT+CGG | - | chr5_3:39246976-39246995 | None:intergenic | 45.0% | |
| AGCATCAGGTGCTTTGTATC+TGG | - | chr5_3:39247020-39247039 | None:intergenic | 45.0% | |
| ! | AGATACAAAGCACCTGATGC+TGG | + | chr5_3:39247019-39247038 | Msa0810640:CDS | 45.0% |
| TTTGACCACGTAGGAATCTC+AGG | - | chr5_3:39247052-39247071 | None:intergenic | 45.0% | |
| ACTAACTCGGAGATGCATTC+TGG | - | chr5_3:39247172-39247191 | None:intergenic | 45.0% | |
| CAGCTCTTTGCAAAGAATCC+AGG | + | chr5_3:39247317-39247336 | Msa0810640:CDS | 45.0% | |
| GCTCTTTGCAAAGAATCCAG+GGG | + | chr5_3:39247319-39247338 | Msa0810640:CDS | 45.0% | |
| ACAGTACAAAAAGTTGCCCC+TGG | - | chr5_3:39247338-39247357 | None:intergenic | 45.0% | |
| TGATGAAGATCTACAGCCCT+AGG | - | chr5_3:39247361-39247380 | None:intergenic | 45.0% | |
| ! | TTTCAATGGCACTGGAGCAA+AGG | + | chr5_3:39247397-39247416 | Msa0810640:CDS | 45.0% |
| ! | TTCAATGGCACTGGAGCAAA+GGG | + | chr5_3:39247398-39247417 | Msa0810640:CDS | 45.0% |
| AATGCACGCCACATGACAAA+CGG | - | chr5_3:39247478-39247497 | None:intergenic | 45.0% | |
| TGATTGCTTAGATTGGTGCG+AGG | + | chr5_3:39247549-39247568 | Msa0810640:CDS | 45.0% | |
| TGGGTACACAAATTGTCCCA+AGG | + | chr5_3:39247841-39247860 | Msa0810640:CDS | 45.0% | |
| AAGTTTACCGCGTCATTGTG+CGG | + | chr5_3:39247928-39247947 | Msa0810640:CDS | 45.0% | |
| !! | AGGTTGAGAGCACCTTTGAA+AGG | - | chr5_3:39247992-39248011 | None:intergenic | 45.0% |
| !! | TATGGATTTGCTGAGGAGCT+TGG | + | chr5_3:39248073-39248092 | Msa0810640:CDS | 45.0% |
| CTGCGTCAGACATATCACAA+TGG | - | chr5_3:39248123-39248142 | None:intergenic | 45.0% | |
| GCTGAAGCAAAACTGGATAG+TGG | + | chr5_3:39248730-39248749 | Msa0810640:CDS | 45.0% | |
| GGAGCTACATGGTGATATTC+AGG | + | chr5_3:39248807-39248826 | Msa0810640:CDS | 45.0% | |
| !! | ATCCCAAAGAGCACCATCTA+AGG | - | chr5_3:39248878-39248897 | None:intergenic | 45.0% |
| TTTGGATACCCCCTGTTAAC+TGG | + | chr5_3:39249024-39249043 | Msa0810640:intron | 45.0% | |
| GTGCTACATCCTTCAAAGCT+AGG | - | chr5_3:39249291-39249310 | None:intergenic | 45.0% | |
| CTCTACAAAAAGAGTGGGCA+AGG | - | chr5_3:39249508-39249527 | None:intergenic | 45.0% | |
| GAGAGATTTGGGTAGACAGA+AGG | - | chr5_3:39249582-39249601 | None:intergenic | 45.0% | |
| TGTTCAGTCCTGCAACACAT+TGG | + | chr5_3:39249664-39249683 | Msa0810640:CDS | 45.0% | |
| ! | GTGCTGGATCCTTTTAAGCT+AGG | - | chr5_3:39249699-39249718 | None:intergenic | 45.0% |
| AAGGATCCAGCACACTTTGT+TGG | + | chr5_3:39249706-39249725 | Msa0810640:intron | 45.0% | |
| AGGATCCAGCACACTTTGTT+GGG | + | chr5_3:39249707-39249726 | Msa0810640:intron | 45.0% | |
| CTACTGAATCGGTGACCTAA+GGG | - | chr5_3:39250081-39250100 | None:intergenic | 45.0% | |
| TCTACTGAATCGGTGACCTA+AGG | - | chr5_3:39250082-39250101 | None:intergenic | 45.0% | |
| AAGTTCACTTGGCAGTAGAC+GGG | + | chr5_3:39250136-39250155 | Msa0810640:intron | 45.0% | |
| ! | ATGACTTGGCAGTCTGATGA+CGG | + | chr5_3:39250173-39250192 | Msa0810640:intron | 45.0% |
| !! | CAGCTTTTTCTTATGCCCGA+TGG | - | chr5_3:39250288-39250307 | None:intergenic | 45.0% |
| CGGGCATAAGAAAAAGCTGA+AGG | + | chr5_3:39250289-39250308 | Msa0810640:CDS | 45.0% | |
| !! | TTCAGATTTCGGACTTGGTG+GGG | - | chr5_3:39250487-39250506 | None:intergenic | 45.0% |
| ! | CTTCAGATTTCGGACTTGGT+GGG | - | chr5_3:39250488-39250507 | None:intergenic | 45.0% |
| GGTAAAACTTGCGTACATGG+TGG | + | chr5_3:39250507-39250526 | Msa0810640:intron | 45.0% | |
| AAACATTCCTAATGGGGGAG+GGG | + | chr5_3:39251261-39251280 | Msa0810640:intron | 45.0% | |
| ! | GGTTTGGGATTTGGTTCCTA+TGG | + | chr5_3:39251282-39251301 | Msa0810640:intron | 45.0% |
| GTCTAGATCGTTACTCGAGT+AGG | + | chr5_3:39251406-39251425 | Msa0810640:intron | 45.0% | |
| GGGTGACAATTGTAGCCAAA+TGG | + | chr5_3:39251427-39251446 | Msa0810640:intron | 45.0% | |
| TGCGGAATTCCTCTGTCAAA+CGG | - | chr5_3:39251740-39251759 | None:intergenic | 45.0% | |
| CAGGTCCATAGAGGACAAAT+TGG | + | chr5_3:39251776-39251795 | Msa0810640:CDS | 45.0% | |
| GTCCATAGAGGACAAATTGG+AGG | + | chr5_3:39251779-39251798 | Msa0810640:CDS | 45.0% | |
| ! | GGAGGTATGCCTGACTATTA+TGG | + | chr5_3:39251797-39251816 | Msa0810640:intron | 45.0% |
| !!! | AGTTTTTTTTTTTTTTTTTT+TGG | + | chr5_3:39248679-39248698 | Msa0810640:intron | 5.0% |
| !! | AGAAAAAATAAATATAAATA+TGG | + | chr5_3:39250649-39250668 | Msa0810640:intron | 5.0% |
| AAGAGACTCCGAACAAACGC+GGG | + | chr5_3:39245383-39245402 | Msa0810640:CDS | 50.0% | |
| TTTCCGGTTACGTTTACCGG+TGG | - | chr5_3:39245456-39245475 | None:intergenic | 50.0% | |
| CATTGATGCGTGTCTGACAC+CGG | + | chr5_3:39245818-39245837 | Msa0810640:intron | 50.0% | |
| TTGCAGTTACCACAGCAGAC+AGG | - | chr5_3:39246122-39246141 | None:intergenic | 50.0% | |
| ! | TGATGAGCGCATGTACTGGT+AGG | + | chr5_3:39246732-39246751 | Msa0810640:intron | 50.0% |
| ! | GATGAGCGCATGTACTGGTA+GGG | + | chr5_3:39246733-39246752 | Msa0810640:intron | 50.0% |
| CGAGGCCCAAATTATCTGCA+TGG | + | chr5_3:39246974-39246993 | Msa0810640:CDS | 50.0% | |
| !! | CACCCAGATTTTGACCACGT+AGG | - | chr5_3:39247061-39247080 | None:intergenic | 50.0% |
| CTACGTGGTCAAAATCTGGG+TGG | + | chr5_3:39247059-39247078 | Msa0810640:CDS | 50.0% | |
| ! | TCAATGGCACTGGAGCAAAG+GGG | + | chr5_3:39247399-39247418 | Msa0810640:CDS | 50.0% |
| AACAGAAAGCAGGGGATGCA+AGG | - | chr5_3:39247662-39247681 | None:intergenic | 50.0% | |
| ATGAACTCCGCACAATGACG+CGG | - | chr5_3:39247938-39247957 | None:intergenic | 50.0% | |
| !! | GATTTGCTGAGGAGCTTGGA+CGG | + | chr5_3:39248077-39248096 | Msa0810640:CDS | 50.0% |
| ! | ATTTGCTGAGGAGCTTGGAC+GGG | + | chr5_3:39248078-39248097 | Msa0810640:CDS | 50.0% |
| AGCACCTTGAGCAAGACAAG+AGG | + | chr5_3:39248785-39248804 | Msa0810640:CDS | 50.0% | |
| GCACCTTGAGCAAGACAAGA+GGG | + | chr5_3:39248786-39248805 | Msa0810640:CDS | 50.0% | |
| CAAGACAAGAGGGAGCTACA+TGG | + | chr5_3:39248796-39248815 | Msa0810640:CDS | 50.0% | |
| ! | GTTGGTGGGGATTCCTTAGA+TGG | + | chr5_3:39248862-39248881 | Msa0810640:CDS | 50.0% |
| TGTCCATTGCTCTCCTGTAG+AGG | + | chr5_3:39248966-39248985 | Msa0810640:CDS | 50.0% | |
| !! | ATGAAGGTATCCTGCAGTGC+TGG | + | chr5_3:39249427-39249446 | Msa0810640:intron | 50.0% |
| ATCGCATTGCCTATTGCCTG+CGG | + | chr5_3:39249467-39249486 | Msa0810640:intron | 50.0% | |
| GTAGAAAGAATCAACGCCGC+AGG | - | chr5_3:39249486-39249505 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr5_3:39249537-39249556 | None:intergenic | 50.0% | |
| GTTGCAGGACTGAACAACCA+AGG | - | chr5_3:39249660-39249679 | None:intergenic | 50.0% | |
| GGATCCAGCACACTTTGTTG+GGG | + | chr5_3:39249708-39249727 | Msa0810640:intron | 50.0% | |
| GATCCAGCACACTTTGTTGG+GGG | + | chr5_3:39249709-39249728 | Msa0810640:intron | 50.0% | |
| TTTCCCCCAACAAAGTGTGC+TGG | - | chr5_3:39249715-39249734 | None:intergenic | 50.0% | |
| CATGCCTCGAATGATCAAGC+TGG | + | chr5_3:39249926-39249945 | Msa0810640:intron | 50.0% | |
| AGTTCACTTGGCAGTAGACG+GGG | + | chr5_3:39250137-39250156 | Msa0810640:intron | 50.0% | |
| !! | TCAGATTTCGGACTTGGTGG+GGG | - | chr5_3:39250486-39250505 | None:intergenic | 50.0% |
| CCTTCAGATTTCGGACTTGG+TGG | - | chr5_3:39250489-39250508 | None:intergenic | 50.0% | |
| CCACCAAGTCCGAAATCTGA+AGG | + | chr5_3:39250486-39250505 | Msa0810640:CDS | 50.0% | |
| TTAACAGGGCTGGGTTATGC+TGG | - | chr5_3:39251088-39251107 | None:intergenic | 50.0% | |
| GGAACACACTTAACAGGGCT+GGG | - | chr5_3:39251097-39251116 | None:intergenic | 50.0% | |
| AGGAACACACTTAACAGGGC+TGG | - | chr5_3:39251098-39251117 | None:intergenic | 50.0% | |
| TGAGTGCTTCCGTTTGACAG+AGG | + | chr5_3:39251728-39251747 | Msa0810640:CDS | 50.0% | |
| CACGGCAACAGAGGAGACAA+AGG | - | chr5_3:39246895-39246914 | None:intergenic | 55.0% | |
| AACGAAGCTCACGGCAACAG+AGG | - | chr5_3:39246904-39246923 | None:intergenic | 55.0% | |
| TGTTGCCGTGAGCTTCGTTG+TGG | + | chr5_3:39246905-39246924 | Msa0810640:CDS | 55.0% | |
| GTTGCCGTGAGCTTCGTTGT+GGG | + | chr5_3:39246906-39246925 | Msa0810640:CDS | 55.0% | |
| CTTCGTTGTGGGCAGCTTCT+AGG | + | chr5_3:39246917-39246936 | Msa0810640:CDS | 55.0% | |
| GTTGTGGGCAGCTTCTAGGT+GGG | + | chr5_3:39246921-39246940 | Msa0810640:CDS | 55.0% | |
| TTGTGGGCAGCTTCTAGGTG+GGG | + | chr5_3:39246922-39246941 | Msa0810640:CDS | 55.0% | |
| CCACGTAGGAATCTCAGGCT+GGG | - | chr5_3:39247047-39247066 | None:intergenic | 55.0% | |
| ACCACGTAGGAATCTCAGGC+TGG | - | chr5_3:39247048-39247067 | None:intergenic | 55.0% | |
| ! | GGGTGGCATGCTGATAGTGA+CGG | + | chr5_3:39247076-39247095 | Msa0810640:CDS | 55.0% |
| CATCAGGCAGCTTCACAGCA+AGG | - | chr5_3:39248012-39248031 | None:intergenic | 55.0% | |
| TTTGCTGAGGAGCTTGGACG+GGG | + | chr5_3:39248079-39248098 | Msa0810640:CDS | 55.0% | |
| GCTCCCTCTTGTCTTGCTCA+AGG | - | chr5_3:39248792-39248811 | None:intergenic | 55.0% | |
| AGAGGACGTACCTGCATTGC+AGG | + | chr5_3:39248909-39248928 | Msa0810640:CDS | 55.0% | |
| CCTCCTCTACAGGAGAGCAA+TGG | - | chr5_3:39248972-39248991 | None:intergenic | 55.0% | |
| CCATTGCTCTCCTGTAGAGG+AGG | + | chr5_3:39248969-39248988 | Msa0810640:CDS | 55.0% | |
| !! | GTATCCTGCAGTGCTGGTCT+GGG | + | chr5_3:39249433-39249452 | Msa0810640:intron | 55.0% |
| ! | GTGCTGGTCTGGGTTTGTCT+AGG | + | chr5_3:39249443-39249462 | Msa0810640:intron | 55.0% |
| GAATCAACGCCGCAGGCAAT+AGG | - | chr5_3:39249479-39249498 | None:intergenic | 55.0% | |
| ! | GAGAGAGAGAGAGAGGCACA+AGG | - | chr5_3:39249532-39249551 | None:intergenic | 55.0% |
| GAATCGGTGACCTAAGGGAC+TGG | - | chr5_3:39250076-39250095 | None:intergenic | 55.0% | |
| TTCCTAATGGGGGAGGGGTT+TGG | + | chr5_3:39251266-39251285 | Msa0810640:intron | 55.0% | |
| TCCTAATGGGGGAGGGGTTT+GGG | + | chr5_3:39251267-39251286 | Msa0810640:intron | 55.0% | |
| ACTCCGAACAAACGCGGGAG+CGG | + | chr5_3:39245388-39245407 | Msa0810640:CDS | 60.0% | |
| GAGGCATGTCCTGTCTGCTG+TGG | + | chr5_3:39246110-39246129 | Msa0810640:CDS | 60.0% | |
| GCTGCCCACAACGAAGCTCA+CGG | - | chr5_3:39246913-39246932 | None:intergenic | 60.0% | |
| CGTTGTGGGCAGCTTCTAGG+TGG | + | chr5_3:39246920-39246939 | Msa0810640:CDS | 60.0% | |
| CCCAGCCTGAGATTCCTACG+TGG | + | chr5_3:39247044-39247063 | Msa0810640:CDS | 60.0% | |
| GCTGGGAGCCGTTTGTCATG+TGG | + | chr5_3:39247467-39247486 | Msa0810640:CDS | 60.0% | |
| GGAGCTTGGACGGGGTGATT+CGG | + | chr5_3:39248087-39248106 | Msa0810640:CDS | 60.0% | |
| !! | GACGGGGTGATTCGGTGACT+AGG | + | chr5_3:39248095-39248114 | Msa0810640:CDS | 60.0% |
| !! | GGTATCCTGCAGTGCTGGTC+TGG | + | chr5_3:39249432-39249451 | Msa0810640:intron | 60.0% |
| CAAACCCAGACCAGCACTGC+AGG | - | chr5_3:39249440-39249459 | None:intergenic | 60.0% | |
| TCCCAAACCCCTCCCCCATT+AGG | - | chr5_3:39251271-39251290 | None:intergenic | 60.0% | |
| ! | TGGGGGAGGGGTTTGGGATT+TGG | + | chr5_3:39251273-39251292 | Msa0810640:intron | 60.0% |
| CCACCGCTCCCGCGTTTGTT+CGG | - | chr5_3:39245394-39245413 | None:intergenic | 65.0% | |
| AACAAACGCGGGAGCGGTGG+CGG | + | chr5_3:39245394-39245413 | Msa0810640:CDS | 65.0% | |
| TCAGGCTGGGCACCAGCATC+AGG | - | chr5_3:39247034-39247053 | None:intergenic | 65.0% | |
| ! | ACTTGGTGGGGGCAACCTGC+TGG | - | chr5_3:39250475-39250494 | None:intergenic | 65.0% |
| CCGAACAAACGCGGGAGCGG+TGG | + | chr5_3:39245391-39245410 | Msa0810640:CDS | 70.0% | |
| ! | AAACGCGGGAGCGGTGGCGG+AGG | + | chr5_3:39245397-39245416 | Msa0810640:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 39245162 | 39252272 | 39245162 | ID=Msa0810640;Name=Msa0810640 |
| chr5_3 | mRNA | 39245162 | 39252272 | 39245162 | ID=Msa0810640-mRNA-1;Parent=Msa0810640;Name=Msa0810640-mRNA-1;_AED=0.05;_eAED=0.05;_QI=134|0.08|0.07|0.92|1|1|13|0|856 |
| chr5_3 | exon | 39245162 | 39245670 | 39245162 | ID=Msa0810640-mRNA-1:exon:11888;Parent=Msa0810640-mRNA-1 |
| chr5_3 | exon | 39245886 | 39246001 | 39245886 | ID=Msa0810640-mRNA-1:exon:11889;Parent=Msa0810640-mRNA-1 |
| chr5_3 | exon | 39246079 | 39246178 | 39246079 | ID=Msa0810640-mRNA-1:exon:11890;Parent=Msa0810640-mRNA-1 |
| chr5_3 | exon | 39246272 | 39246413 | 39246272 | ID=Msa0810640-mRNA-1:exon:11891;Parent=Msa0810640-mRNA-1 |
| chr5_3 | exon | 39246686 | 39246749 | 39246686 | ID=Msa0810640-mRNA-1:exon:11892;Parent=Msa0810640-mRNA-1 |
| chr5_3 | exon | 39246832 | 39247570 | 39246832 | ID=Msa0810640-mRNA-1:exon:11893;Parent=Msa0810640-mRNA-1 |
| chr5_3 | exon | 39247812 | 39248141 | 39247812 | ID=Msa0810640-mRNA-1:exon:11894;Parent=Msa0810640-mRNA-1 |
| chr5_3 | exon | 39248709 | 39248990 | 39248709 | ID=Msa0810640-mRNA-1:exon:11895;Parent=Msa0810640-mRNA-1 |
| chr5_3 | exon | 39249611 | 39249685 | 39249611 | ID=Msa0810640-mRNA-1:exon:11896;Parent=Msa0810640-mRNA-1 |
| chr5_3 | exon | 39250248 | 39250320 | 39250248 | ID=Msa0810640-mRNA-1:exon:11897;Parent=Msa0810640-mRNA-1 |
| chr5_3 | exon | 39250422 | 39250507 | 39250422 | ID=Msa0810640-mRNA-1:exon:11898;Parent=Msa0810640-mRNA-1 |
| chr5_3 | exon | 39251681 | 39251800 | 39251681 | ID=Msa0810640-mRNA-1:exon:11899;Parent=Msa0810640-mRNA-1 |
| chr5_3 | exon | 39252204 | 39252272 | 39252204 | ID=Msa0810640-mRNA-1:exon:11900;Parent=Msa0810640-mRNA-1 |
| chr5_3 | five_prime_UTR | 39245162 | 39245295 | 39245162 | ID=Msa0810640-mRNA-1:five_prime_utr;Parent=Msa0810640-mRNA-1 |
| chr5_3 | CDS | 39245296 | 39245670 | 39245296 | ID=Msa0810640-mRNA-1:cds;Parent=Msa0810640-mRNA-1 |
| chr5_3 | CDS | 39245886 | 39246001 | 39245886 | ID=Msa0810640-mRNA-1:cds;Parent=Msa0810640-mRNA-1 |
| chr5_3 | CDS | 39246079 | 39246178 | 39246079 | ID=Msa0810640-mRNA-1:cds;Parent=Msa0810640-mRNA-1 |
| chr5_3 | CDS | 39246272 | 39246413 | 39246272 | ID=Msa0810640-mRNA-1:cds;Parent=Msa0810640-mRNA-1 |
| chr5_3 | CDS | 39246686 | 39246749 | 39246686 | ID=Msa0810640-mRNA-1:cds;Parent=Msa0810640-mRNA-1 |
| chr5_3 | CDS | 39246832 | 39247570 | 39246832 | ID=Msa0810640-mRNA-1:cds;Parent=Msa0810640-mRNA-1 |
| chr5_3 | CDS | 39247812 | 39248141 | 39247812 | ID=Msa0810640-mRNA-1:cds;Parent=Msa0810640-mRNA-1 |
| chr5_3 | CDS | 39248709 | 39248990 | 39248709 | ID=Msa0810640-mRNA-1:cds;Parent=Msa0810640-mRNA-1 |
| chr5_3 | CDS | 39249611 | 39249685 | 39249611 | ID=Msa0810640-mRNA-1:cds;Parent=Msa0810640-mRNA-1 |
| chr5_3 | CDS | 39250248 | 39250320 | 39250248 | ID=Msa0810640-mRNA-1:cds;Parent=Msa0810640-mRNA-1 |
| chr5_3 | CDS | 39250422 | 39250507 | 39250422 | ID=Msa0810640-mRNA-1:cds;Parent=Msa0810640-mRNA-1 |
| chr5_3 | CDS | 39251681 | 39251800 | 39251681 | ID=Msa0810640-mRNA-1:cds;Parent=Msa0810640-mRNA-1 |
| chr5_3 | CDS | 39252204 | 39252272 | 39252204 | ID=Msa0810640-mRNA-1:cds;Parent=Msa0810640-mRNA-1 |
| Gene Sequence |
| Protein sequence |