AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0813120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0813120 MtrunA17_Chr5g0430211 96.322 707 23 1 1 707 1 704 0.0 1419
Msa0813120 MtrunA17_Chr5g0437251 49.856 694 295 13 30 706 25 682 0.0 640
Msa0813120 MtrunA17_Chr1g0187591 53.988 652 207 14 1 642 1 569 0.0 615
Msa0813120 MtrunA17_Chr3g0105131 46.059 647 198 17 1 641 1 502 4.30e-157 464
Msa0813120 MtrunA17_Chr7g0257831 41.254 686 305 17 35 670 47 684 8.10e-155 466
Msa0813120 MtrunA17_Chr3g0088521 39.835 728 338 18 33 702 43 728 3.48e-145 441
Msa0813120 MtrunA17_Chr3g0105101 46.371 496 141 12 38 530 28 401 1.70e-125 379
Msa0813120 MtrunA17_Chr3g0113651 47.100 431 158 6 33 462 8 369 2.60e-124 380
Msa0813120 MtrunA17_Chr3g0113651 33.028 218 120 9 483 698 322 515 1.27e-18 89.7
Msa0813120 MtrunA17_Chr1g0171151 40.221 542 256 14 35 538 31 542 5.60e-108 340
Msa0813120 MtrunA17_Chr3g0092171 43.869 367 160 8 32 378 80 420 4.14e-88 285
Msa0813120 MtrunA17_Chr3g0092221 40.896 335 140 10 138 451 51 348 1.06e-72 241
Msa0813120 MtrunA17_Chr3g0105121 38.303 436 178 14 229 660 8 356 4.97e-69 230
Msa0813120 MtrunA17_Chr3g0105141 65.000 140 47 2 199 336 4 143 3.95e-62 205
Msa0813120 MtrunA17_Chr8g0389561 45.411 207 105 2 178 381 34 235 9.07e-55 192
Msa0813120 MtrunA17_Chr6g0487481 57.971 138 48 2 196 332 77 205 1.54e-52 186
Msa0813120 MtrunA17_Chr3g0135351 49.419 172 73 3 202 372 32 190 2.88e-52 182
Msa0813120 MtrunA17_Chr2g0324781 61.261 111 43 0 230 340 77 187 1.80e-47 173
Msa0813120 MtrunA17_Chr4g0040391 57.009 107 46 0 226 332 56 162 2.28e-44 162
Msa0813120 MtrunA17_Chr3g0105151 35.172 290 113 12 394 671 1 227 3.34e-30 119
Msa0813120 MtrunA17_Chr3g0105111 43.103 116 39 5 596 706 17 110 1.56e-14 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0813120 AT5G58620.1 46.601 706 254 18 23 706 2 606 0.0 575
Msa0813120 AT2G40140.2 42.297 714 285 17 1 706 1 595 2.62e-172 506
Msa0813120 AT2G40140.1 42.297 714 285 17 1 706 1 595 2.62e-172 506
Msa0813120 AT2G41900.1 40.054 734 303 21 35 702 48 710 6.50e-143 435
Msa0813120 AT3G55980.1 49.578 474 196 13 1 462 1 443 5.67e-140 423
Msa0813120 AT3G55980.1 38.579 197 81 8 514 706 419 579 1.14e-21 100
Msa0813120 AT3G55980.2 49.578 474 196 13 1 462 68 510 3.75e-139 423
Msa0813120 AT3G55980.2 38.579 197 81 8 514 706 486 646 2.02e-21 99.8
Msa0813120 AT5G12850.1 38.462 741 317 25 30 702 37 706 8.66e-138 421
Msa0813120 AT4G29190.1 51.705 176 84 1 212 387 62 236 1.18e-53 189
Msa0813120 AT2G25900.2 66.964 112 37 0 226 337 86 197 1.72e-53 187
Msa0813120 AT2G25900.1 66.964 112 37 0 226 337 86 197 1.72e-53 187
Msa0813120 AT2G19810.1 62.500 120 45 0 215 334 63 182 5.33e-52 184
Msa0813120 AT5G07500.1 59.504 121 49 0 212 332 34 154 8.77e-50 174
Msa0813120 AT1G03790.1 51.634 153 66 3 197 345 53 201 2.00e-47 172
Msa0813120 AT5G44260.1 55.970 134 54 2 210 342 44 173 2.28e-45 167

Find 193 sgRNAs with CRISPR-Local

Find 450 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAGTCTTCAACCTGCTTT+TGG 0.190182 5_3:+43619081 None:intergenic
TCAGACATGTCTTCTGTTTC+CGG 0.194365 5_3:-43619761 Msa0813120:CDS
CTCTTCATTGTGCGGTTGTT+GGG 0.225881 5_3:-43619960 Msa0813120:CDS
AAAGTTGGTTCGAACAAATT+AGG 0.237750 5_3:-43620105 Msa0813120:CDS
GGGCTCACCCGATGGAAATT+TGG 0.238746 5_3:-43618498 Msa0813120:CDS
GGTGTATCGGCTTATATTCT+TGG 0.253857 5_3:-43620033 Msa0813120:CDS
CTAGCTGCAGCTGGAGTTAA+AGG 0.264190 5_3:+43618401 None:intergenic
GAGGATGCTACAAGCTCTTT+TGG 0.287126 5_3:-43619803 Msa0813120:CDS
ATACGACCGGGGAACTAAAT+AGG 0.321029 5_3:-43618895 Msa0813120:CDS
CTGAGGAAATCATCTTCATT+TGG 0.338854 5_3:-43618443 Msa0813120:CDS
GTGTCCCTTGTCCTGAGTTT+CGG 0.340392 5_3:-43619489 Msa0813120:CDS
CAAGGGCATATTCTCATGAT+TGG 0.354374 5_3:-43619582 Msa0813120:CDS
GCTCTTCATTGTGCGGTTGT+TGG 0.359015 5_3:-43619961 Msa0813120:CDS
AGCAAAATCTTGATAATCTC+AGG 0.360059 5_3:+43619922 None:intergenic
GATTCATATTCGGACGCATT+TGG 0.363999 5_3:+43618738 None:intergenic
ACCTATAGGTTTGATCCATC+TGG 0.364237 5_3:-43618656 Msa0813120:CDS
TGCAGATGCTGATTCATATT+CGG 0.365840 5_3:+43618728 None:intergenic
ACGCCGCCTTTGACTTCATC+TGG 0.368423 5_3:-43619178 Msa0813120:CDS
GATGGGGTTGGTTTGTGGTA+TGG 0.371287 5_3:-43620132 Msa0813120:CDS
GTCTTTCCTCTCCTTCCAAC+TGG 0.371979 5_3:-43618967 Msa0813120:CDS
TGCTGCTATGTATGGAAGCT+TGG 0.375393 5_3:-43620055 Msa0813120:CDS
TATATAGTACCGATGAGTTT+AGG 0.375544 5_3:-43619633 Msa0813120:CDS
TCCTGTGCCCTAGCTGCAGC+TGG 0.377666 5_3:+43618392 None:intergenic
CTGCAACAAAACTATTCTTC+AGG 0.389322 5_3:-43618710 Msa0813120:CDS
CGTTGATTTGATTGTTTCGC+TGG 0.389845 5_3:-43619851 Msa0813120:CDS
CGCCCCTTGTATGCTTCTAC+CGG 0.390009 5_3:-43619313 Msa0813120:CDS
CATTCCACTTCTAGTGTGAT+TGG 0.397045 5_3:-43618686 Msa0813120:CDS
CACATGGCTGCAGCAGCAAC+GGG 0.402327 5_3:+43619145 None:intergenic
CAACGGAACAGATTCAATTC+CGG 0.405530 5_3:-43618252 Msa0813120:CDS
ATTCAGATATTGCAATGCTT+AGG 0.408619 5_3:-43619039 Msa0813120:CDS
AAAATGTCTTCAAGGTTTGT+AGG 0.409953 5_3:+43618857 None:intergenic
CTCATGGTTGCTGCTATGTA+TGG 0.412796 5_3:-43620063 Msa0813120:CDS
TGGAATTTATGCAACATTGA+TGG 0.416189 5_3:+43618821 None:intergenic
TTGGGTTAATTCACTTGTAA+AGG 0.417539 5_3:-43618345 Msa0813120:CDS
TTCAGATATTGCAATGCTTA+GGG 0.419562 5_3:-43619038 Msa0813120:CDS
TCGGCTTATATTCTTGGAAC+AGG 0.420142 5_3:-43620027 Msa0813120:CDS
TTGTCAAAAGGATTTGATCA+TGG 0.420181 5_3:-43620280 Msa0813120:CDS
TGATTGGATCGCCAACCTAT+AGG 0.421260 5_3:-43618670 Msa0813120:CDS
TATATCCCATTCTTAATGTC+TGG 0.426530 5_3:+43619652 None:intergenic
CTTGATGCTGCAGGAGCAGC+AGG 0.434896 5_3:-43618788 Msa0813120:CDS
GAGACCCGAAAATGTCTTCA+AGG 0.438096 5_3:+43618849 None:intergenic
CTTATATTCTTGGAACAGGT+CGG 0.443594 5_3:-43620023 Msa0813120:CDS
AATCTGTTCCGTTGTTAAGA+TGG 0.448355 5_3:+43618261 None:intergenic
GTATGGTTGGTCGAAGAAAC+CGG 0.454341 5_3:+43618914 None:intergenic
GAGTGTCCCTTTGTTCATCC+AGG 0.455762 5_3:-43619556 Msa0813120:CDS
CCTTTGATTGAAGATAGAAT+TGG 0.456239 5_3:+43619828 None:intergenic
AGATTCAATTCCGGCTTGGT+TGG 0.457333 5_3:-43618243 Msa0813120:CDS
TCAAAGTGAAGCCTTGTTCA+AGG 0.457380 5_3:-43619600 Msa0813120:CDS
AGCGAAACAATCAAATCAAC+GGG 0.458139 5_3:+43619853 None:intergenic
GCTGCTATGTATGGAAGCTT+GGG 0.458172 5_3:-43620054 Msa0813120:CDS
CACCCGATGGAAATTTGGAT+TGG 0.458700 5_3:-43618493 Msa0813120:CDS
CCACATGGCTGCAGCAGCAA+CGG 0.462166 5_3:+43619144 None:intergenic
CAGCTATAATGATATTTCCT+TGG 0.464131 5_3:+43619511 None:intergenic
TGTCAAAAGGATTTGATCAT+GGG 0.468107 5_3:-43620279 Msa0813120:CDS
CTTCTTTGCTCACAAGGTCG+AGG 0.469734 5_3:-43619341 Msa0813120:CDS
ATGCTGATGGGGTTGGTTTG+TGG 0.475241 5_3:-43620137 Msa0813120:CDS
TCTCTTCCAGACATTAAGAA+TGG 0.478120 5_3:-43619658 Msa0813120:CDS
AGAATTTCACTTGATGCTGC+AGG 0.479378 5_3:-43618797 Msa0813120:CDS
CTTTAACTCCAGCTGCAGCT+AGG 0.479692 5_3:-43618400 Msa0813120:CDS
GGAGCAATTGTACATGGATC+AGG 0.480663 5_3:-43618222 Msa0813120:CDS
CCCTTCAGCTTCCCAAAAGC+AGG 0.481050 5_3:-43619093 Msa0813120:CDS
CTCTTCCAGACATTAAGAAT+GGG 0.482849 5_3:-43619657 Msa0813120:CDS
GTCGAAGAAACCGGAAAAGA+TGG 0.483591 5_3:+43618923 None:intergenic
GTATGGAAGCTTGGGTGTAT+CGG 0.487313 5_3:-43620046 Msa0813120:CDS
CGGAAAGGATCGTGCAGTAA+AGG 0.487429 5_3:-43619469 Msa0813120:CDS
ACCGGAAAAGATGGACTGTT+AGG 0.489839 5_3:+43618932 None:intergenic
AGCTGGAGTTAAAGGAGTAC+TGG 0.489995 5_3:+43618409 None:intergenic
TTATATTCTTGGAACAGGTC+GGG 0.491005 5_3:-43620022 Msa0813120:CDS
TCTTCATTGTGCGGTTGTTG+GGG 0.492583 5_3:-43619959 Msa0813120:CDS
TTGTGGTATGGAAGGAAAGT+TGG 0.493676 5_3:-43620120 Msa0813120:CDS
GGTTGCGATGCTGATGGGGT+TGG 0.494772 5_3:-43620144 Msa0813120:CDS
AGGGTAGGGATCGAAACATT+AGG 0.496408 5_3:+43619112 None:intergenic
TCTGGAAGAGAGACATCAAC+AGG 0.501027 5_3:+43619670 None:intergenic
CCCAGATGGATCAAACCTAT+AGG 0.501454 5_3:+43618655 None:intergenic
TCAGCTGCAGATGATGTGAT+TGG 0.501958 5_3:-43620192 Msa0813120:CDS
TTTAACTCCAGCTGCAGCTA+GGG 0.502176 5_3:-43618399 Msa0813120:CDS
TATTTAGTTCCCCGGTCGTA+TGG 0.502935 5_3:+43618897 None:intergenic
GATCATGGGGTGTGAGTATG+TGG 0.503492 5_3:-43620265 Msa0813120:CDS
TCTCAGTTACAATCTCCAAC+TGG 0.504676 5_3:-43618764 Msa0813120:CDS
ATGGAGAACCAAGTGACATT+GGG 0.506623 5_3:+43619224 None:intergenic
GGACGCATTTGGATTCCAGT+TGG 0.507506 5_3:+43618749 None:intergenic
ATGGGGTGTGAGTATGTGGA+TGG 0.507541 5_3:-43620261 Msa0813120:CDS
CCTATAGGTTTGATCCATCT+GGG 0.508102 5_3:-43618655 Msa0813120:CDS
CTATGAACCAGATGTGTCTT+GGG 0.508226 5_3:-43618363 Msa0813120:CDS
TCCAGCTGCAGCTAGGGCAC+AGG 0.510410 5_3:-43618393 Msa0813120:CDS
CCCAAAAGCAGGTTGAAGAC+TGG 0.511273 5_3:-43619082 Msa0813120:CDS
AGGAGATGGAATAGCAGAAC+CGG 0.512673 5_3:+43619294 None:intergenic
TTAGTGTTGAAGATCAGAAA+AGG 0.514281 5_3:-43618295 Msa0813120:CDS
TACTGCTTCTACATTAGAGA+TGG 0.516771 5_3:-43619257 Msa0813120:CDS
TAGTTCCCCGGTCGTATGGT+TGG 0.517395 5_3:+43618901 None:intergenic
GAATTAACCCAAGACACATC+TGG 0.517792 5_3:+43618356 None:intergenic
TATGTGGATGGGAATAAAGA+AGG 0.517822 5_3:-43620249 Msa0813120:CDS
GTTGATGTTAATCGTTCTAG+TGG 0.518818 5_3:-43620000 Msa0813120:CDS
ATGCAAGGCGACGCGATCCA+AGG 0.519136 5_3:-43619528 Msa0813120:CDS
ACGAGGGTTGCGATGCTGAT+GGG 0.520146 5_3:-43620149 Msa0813120:CDS
CACCGCGCTCGATAAAGCTC+TGG 0.521693 5_3:+43618579 None:intergenic
GATGGAGAACCAAGTGACAT+TGG 0.523747 5_3:+43619223 None:intergenic
CGAAAACCTATTTAGTTCCC+CGG 0.524607 5_3:+43618889 None:intergenic
GCTCTGGCTCCGCTTTGAAA+AGG 0.525597 5_3:+43618595 None:intergenic
GAACAGATTCAATTCCGGCT+TGG 0.528287 5_3:-43618247 Msa0813120:CDS
TCAATTAGCCCAATGTCACT+TGG 0.531302 5_3:-43619232 Msa0813120:CDS
CCAATTCTATCTTCAATCAA+AGG 0.534122 5_3:-43619828 Msa0813120:CDS
GTCCAATCCAAATTTCCATC+GGG 0.538779 5_3:+43618491 None:intergenic
TTGGTTGGAGCAATTGTACA+TGG 0.540592 5_3:-43618228 Msa0813120:CDS
TCTTCGACCAACCATACGAC+CGG 0.541735 5_3:-43618908 Msa0813120:CDS
CGATCCAATCACACTAGAAG+TGG 0.542472 5_3:+43618682 None:intergenic
ACTATGAACCAGATGTGTCT+TGG 0.542920 5_3:-43618364 Msa0813120:CDS
TACAATTGCTCCAACCAAGC+CGG 0.546247 5_3:+43618233 None:intergenic
GTCAAAGGCGGCGTTGAGGA+GGG 0.547086 5_3:+43619187 None:intergenic
AGTTTGCTTCTTTGCTCACA+AGG 0.549883 5_3:-43619347 Msa0813120:CDS
CACGATCCTTTCCGAAACTC+AGG 0.550059 5_3:+43619478 None:intergenic
CAAAGTGAAGCCTTGTTCAA+GGG 0.551738 5_3:-43619599 Msa0813120:CDS
CTATCTTCAATCAAAGGAAG+AGG 0.552090 5_3:-43619822 Msa0813120:CDS
GCGAAAGCAGCAACTACTGA+TGG 0.552696 5_3:-43619002 Msa0813120:CDS
CTTCGACCAACCATACGACC+GGG 0.555663 5_3:-43618907 Msa0813120:CDS
TCTAACTGGGGCTCACCCGA+TGG 0.560712 5_3:-43618506 Msa0813120:CDS
AGCCGTGTCTTATACTGCGC+AGG 0.561388 5_3:+43619400 None:intergenic
GCAAAATCTTGATAATCTCA+GGG 0.561505 5_3:+43619923 None:intergenic
AGTCAAAGGCGGCGTTGAGG+AGG 0.561805 5_3:+43619186 None:intergenic
CTGTAATATGACCTAGGAGA+TGG 0.562519 5_3:+43619280 None:intergenic
TCAATGTCATCAATTGTCTC+CGG 0.563566 5_3:+43619742 None:intergenic
TTCATCCAGGGGAAAATGCA+AGG 0.563820 5_3:-43619543 Msa0813120:CDS
AGAACCGGTAGAAGCATACA+AGG 0.565045 5_3:+43619309 None:intergenic
CTACTGATGGATGAGATGTC+CGG 0.565792 5_3:-43618989 Msa0813120:CDS
GGGTTGGTTTGTGGTATGGA+AGG 0.567780 5_3:-43620128 Msa0813120:CDS
ACTGCTTCTACATTAGAGAT+GGG 0.570201 5_3:-43619256 Msa0813120:CDS
CAGCGAAACAATCAAATCAA+CGG 0.573462 5_3:+43619852 None:intergenic
ATGTGGATGGGAATAAAGAA+GGG 0.574001 5_3:-43620248 Msa0813120:CDS
GAGGGTGGTATCAAAACAGA+TGG 0.574942 5_3:+43619205 None:intergenic
TGAAGAGAGGACCCCTCTCA+TGG 0.576335 5_3:-43620079 Msa0813120:CDS
ACAAATTAGGTTATGAAGAG+AGG 0.576520 5_3:-43620092 Msa0813120:CDS
AGTGTCCCTTTGTTCATCCA+GGG 0.576667 5_3:-43619555 Msa0813120:CDS
ATGGAATGATTCCAGTTGGA+AGG 0.579291 5_3:+43618956 None:intergenic
CCTTTCCGAAACTCAGGACA+AGG 0.580350 5_3:+43619484 None:intergenic
GTATAAGACACGGCTTTGCA+AGG 0.581068 5_3:-43619392 Msa0813120:CDS
GTTGGAAGGAGAGGAAAGAC+CGG 0.583195 5_3:+43618970 None:intergenic
ATGATTCCAGTTGGAAGGAG+AGG 0.583775 5_3:+43618961 None:intergenic
GATGGATCAAACCTATAGGT+TGG 0.584232 5_3:+43618659 None:intergenic
AGTCCAATCCAAATTTCCAT+CGG 0.586204 5_3:+43618490 None:intergenic
ATGAAGAGCAGTAGCACCAT+CGG 0.586647 5_3:+43619975 None:intergenic
CGAGGGTTGCGATGCTGATG+GGG 0.588284 5_3:-43620148 Msa0813120:CDS
GACGCGGATAACTCCCCAGA+TGG 0.588308 5_3:+43618641 None:intergenic
CCTTGTCCTGAGTTTCGGAA+AGG 0.590059 5_3:-43619484 Msa0813120:CDS
AGGCATGGAATGATTCCAGT+TGG 0.590112 5_3:+43618952 None:intergenic
CCGTTGCTGCTGCAGCCATG+TGG 0.592506 5_3:-43619144 Msa0813120:CDS
TGAGAATATGCCCTTGAACA+AGG 0.592589 5_3:+43619589 None:intergenic
CAATCACACTAGAAGTGGAA+TGG 0.595527 5_3:+43618687 None:intergenic
ATCTGAATTAATATCTCTAG+CGG 0.595917 5_3:+43619054 None:intergenic
ACATAGCAGCAACCATGAGA+GGG 0.597227 5_3:+43620067 None:intergenic
ATGACATTGACGAATATCAA+AGG 0.602422 5_3:-43619729 Msa0813120:CDS
TACATAGCAGCAACCATGAG+AGG 0.603429 5_3:+43620066 None:intergenic
ATCTGGGGAGTTATCCGCGT+CGG 0.603525 5_3:-43618639 Msa0813120:CDS
AATTTGGATTGGACTTCACA+CGG 0.603583 5_3:-43618482 Msa0813120:CDS
CAGCATCAAGTGAAATTCTG+TGG 0.605687 5_3:+43618801 None:intergenic
TGCTACTGCTCTTCATTGTG+CGG 0.605703 5_3:-43619968 Msa0813120:CDS
GAGAATGAAGCTCAGAATGA+CGG 0.613447 5_3:+43618549 None:intergenic
AGCCAGAGCTTTATCGAGCG+CGG 0.613507 5_3:-43618581 Msa0813120:CDS
AAAAGATGGACTGTTAGGCA+TGG 0.613610 5_3:+43618937 None:intergenic
AACGAGGGTTGCGATGCTGA+TGG 0.616925 5_3:-43620150 Msa0813120:CDS
TGGATGAACAAAGGGACACT+CGG 0.617153 5_3:+43619558 None:intergenic
AATCGTTCTAGTGGATCCGA+TGG 0.617627 5_3:-43619991 Msa0813120:CDS
TGTATACATCCTAAACTCAT+CGG 0.621538 5_3:+43619624 None:intergenic
GTTCTGCTATTCCATCTCCT+AGG 0.623662 5_3:-43619291 Msa0813120:CDS
TGGGGTGTGAGTATGTGGAT+GGG 0.628995 5_3:-43620260 Msa0813120:CDS
GTCAAAAGGATTTGATCATG+GGG 0.630254 5_3:-43620278 Msa0813120:CDS
GTGTCCCTTTGTTCATCCAG+GGG 0.633464 5_3:-43619554 Msa0813120:CDS
ATCAACGGGTCGGTTACCGT+TGG 0.633957 5_3:+43619867 None:intergenic
GCAGTACTGTAATATGACCT+AGG 0.634516 5_3:+43619274 None:intergenic
CTTCATTGTGCGGTTGTTGG+GGG 0.635961 5_3:-43619958 Msa0813120:CDS
ATTAGGCGGTGTCTGCCACA+TGG 0.640830 5_3:+43619129 None:intergenic
GACGCTCCAGATGAAGTCAA+AGG 0.647006 5_3:+43619172 None:intergenic
AAAGGCGGCGTTGAGGAGGG+TGG 0.647882 5_3:+43619190 None:intergenic
GCTAGTGCTGTTGATGCCAA+CGG 0.653244 5_3:-43619883 Msa0813120:CDS
TAAAGAAGGGCAGTATCATG+AGG 0.655064 5_3:-43620235 Msa0813120:CDS
TGGAGTTAAAGGAGTACTGG+TGG 0.655843 5_3:+43618412 None:intergenic
TGAAGTCAAAGGCGGCGTTG+AGG 0.657176 5_3:+43619183 None:intergenic
AAACAATCAAATCAACGGGT+CGG 0.658914 5_3:+43619857 None:intergenic
CTAAACTGACGAGATTCTTG+CGG 0.662149 5_3:+43618314 None:intergenic
GAGAAGAACTGAATAAGCTG+AGG 0.666361 5_3:-43618460 Msa0813120:CDS
TTCGACCAACCATACGACCG+GGG 0.672912 5_3:-43618906 Msa0813120:CDS
TGCTTAGGGTTGAAACTCAG+CGG 0.673294 5_3:-43619024 Msa0813120:CDS
CATAGCAGCAACCATGAGAG+GGG 0.673406 5_3:+43620068 None:intergenic
AACCGGTAGAAGCATACAAG+GGG 0.673738 5_3:+43619311 None:intergenic
CAAAATCTTGATAATCTCAG+GGG 0.681248 5_3:+43619924 None:intergenic
GAACCGGTAGAAGCATACAA+GGG 0.683674 5_3:+43619310 None:intergenic
CTGCAGCGCCATCTTAACAA+CGG 0.687526 5_3:-43618269 Msa0813120:CDS
CTATAGGTTTGATCCATCTG+GGG 0.687753 5_3:-43618654 Msa0813120:CDS
ATCCTGCGCAGTATAAGACA+CGG 0.689588 5_3:-43619402 Msa0813120:CDS
TCTTGCATTCAAAGCCGACG+CGG 0.707580 5_3:+43618625 None:intergenic
GATTCTTGTGACTATGCACA+CGG 0.716065 5_3:-43619445 Msa0813120:CDS
CTTTCCGAAACTCAGGACAA+GGG 0.724035 5_3:+43619485 None:intergenic
GCTCCAGATGAAGTCAAAGG+CGG 0.730706 5_3:+43619175 None:intergenic
GTAGGGATCGAAACATTAGG+CGG 0.775386 5_3:+43619115 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGAAAAAAACTTGTCAAA+AGG - chr5_3:43618219-43618238 Msa0813120:CDS 20.0%
!! TAAGAAAAAAACTTGTCAAA+AGG - chr5_3:43618219-43618238 Msa0813120:CDS 20.0%
! ATCTGAATTAATATCTCTAG+CGG + chr5_3:43619460-43619479 None:intergenic 25.0%
! ATCTGAATTAATATCTCTAG+CGG + chr5_3:43619460-43619479 None:intergenic 25.0%
TTGTCAAAAGGATTTGATCA+TGG - chr5_3:43618231-43618250 Msa0813120:CDS 30.0%
TGTCAAAAGGATTTGATCAT+GGG - chr5_3:43618232-43618251 Msa0813120:CDS 30.0%
AAAAAATGCGATTGAAAACG+AGG - chr5_3:43618345-43618364 Msa0813120:CDS 30.0%
AAAAATGCGATTGAAAACGA+GGG - chr5_3:43618346-43618365 Msa0813120:CDS 30.0%
!! AAAGTTGGTTCGAACAAATT+AGG - chr5_3:43618406-43618425 Msa0813120:CDS 30.0%
ACAAATTAGGTTATGAAGAG+AGG - chr5_3:43618419-43618438 Msa0813120:CDS 30.0%
! CAAAATCTTGATAATCTCAG+GGG + chr5_3:43618590-43618609 None:intergenic 30.0%
! GCAAAATCTTGATAATCTCA+GGG + chr5_3:43618591-43618610 None:intergenic 30.0%
! AGCAAAATCTTGATAATCTC+AGG + chr5_3:43618592-43618611 None:intergenic 30.0%
CCTTTGATTGAAGATAGAAT+TGG + chr5_3:43618686-43618705 None:intergenic 30.0%
CCAATTCTATCTTCAATCAA+AGG - chr5_3:43618683-43618702 Msa0813120:CDS 30.0%
ATGACATTGACGAATATCAA+AGG - chr5_3:43618782-43618801 Msa0813120:CDS 30.0%
TATATCCCATTCTTAATGTC+TGG + chr5_3:43618862-43618881 None:intergenic 30.0%
!! TATATAGTACCGATGAGTTT+AGG - chr5_3:43618878-43618897 Msa0813120:CDS 30.0%
TGTATACATCCTAAACTCAT+CGG + chr5_3:43618890-43618909 None:intergenic 30.0%
CAGCTATAATGATATTTCCT+TGG + chr5_3:43619003-43619022 None:intergenic 30.0%
ATTCAGATATTGCAATGCTT+AGG - chr5_3:43619472-43619491 Msa0813120:CDS 30.0%
TTCAGATATTGCAATGCTTA+GGG - chr5_3:43619473-43619492 Msa0813120:CDS 30.0%
AAAATGTCTTCAAGGTTTGT+AGG + chr5_3:43619657-43619676 None:intergenic 30.0%
! ACAAACCTTGAAGACATTTT+CGG - chr5_3:43619657-43619676 Msa0813120:CDS 30.0%
TGGAATTTATGCAACATTGA+TGG + chr5_3:43619693-43619712 None:intergenic 30.0%
TTGGGTTAATTCACTTGTAA+AGG - chr5_3:43620166-43620185 Msa0813120:CDS 30.0%
! TTAGTGTTGAAGATCAGAAA+AGG - chr5_3:43620216-43620235 Msa0813120:CDS 30.0%
TTGTCAAAAGGATTTGATCA+TGG - chr5_3:43618231-43618250 Msa0813120:CDS 30.0%
TGTCAAAAGGATTTGATCAT+GGG - chr5_3:43618232-43618251 Msa0813120:CDS 30.0%
AAAAAATGCGATTGAAAACG+AGG - chr5_3:43618345-43618364 Msa0813120:CDS 30.0%
AAAAATGCGATTGAAAACGA+GGG - chr5_3:43618346-43618365 Msa0813120:CDS 30.0%
!! AAAGTTGGTTCGAACAAATT+AGG - chr5_3:43618406-43618425 Msa0813120:CDS 30.0%
ACAAATTAGGTTATGAAGAG+AGG - chr5_3:43618419-43618438 Msa0813120:CDS 30.0%
! CAAAATCTTGATAATCTCAG+GGG + chr5_3:43618590-43618609 None:intergenic 30.0%
! GCAAAATCTTGATAATCTCA+GGG + chr5_3:43618591-43618610 None:intergenic 30.0%
! AGCAAAATCTTGATAATCTC+AGG + chr5_3:43618592-43618611 None:intergenic 30.0%
CCTTTGATTGAAGATAGAAT+TGG + chr5_3:43618686-43618705 None:intergenic 30.0%
CCAATTCTATCTTCAATCAA+AGG - chr5_3:43618683-43618702 Msa0813120:CDS 30.0%
ATGACATTGACGAATATCAA+AGG - chr5_3:43618782-43618801 Msa0813120:CDS 30.0%
TATATCCCATTCTTAATGTC+TGG + chr5_3:43618862-43618881 None:intergenic 30.0%
!! TATATAGTACCGATGAGTTT+AGG - chr5_3:43618878-43618897 Msa0813120:CDS 30.0%
TGTATACATCCTAAACTCAT+CGG + chr5_3:43618890-43618909 None:intergenic 30.0%
CAGCTATAATGATATTTCCT+TGG + chr5_3:43619003-43619022 None:intergenic 30.0%
ATTCAGATATTGCAATGCTT+AGG - chr5_3:43619472-43619491 Msa0813120:CDS 30.0%
TTCAGATATTGCAATGCTTA+GGG - chr5_3:43619473-43619492 Msa0813120:CDS 30.0%
AAAATGTCTTCAAGGTTTGT+AGG + chr5_3:43619657-43619676 None:intergenic 30.0%
! ACAAACCTTGAAGACATTTT+CGG - chr5_3:43619657-43619676 Msa0813120:CDS 30.0%
TGGAATTTATGCAACATTGA+TGG + chr5_3:43619693-43619712 None:intergenic 30.0%
TTGGGTTAATTCACTTGTAA+AGG - chr5_3:43620166-43620185 Msa0813120:CDS 30.0%
! TTAGTGTTGAAGATCAGAAA+AGG - chr5_3:43620216-43620235 Msa0813120:CDS 30.0%
GTCAAAAGGATTTGATCATG+GGG - chr5_3:43618233-43618252 Msa0813120:CDS 35.0%
TATGTGGATGGGAATAAAGA+AGG - chr5_3:43618262-43618281 Msa0813120:CDS 35.0%
ATGTGGATGGGAATAAAGAA+GGG - chr5_3:43618263-43618282 Msa0813120:CDS 35.0%
CTTATATTCTTGGAACAGGT+CGG - chr5_3:43618488-43618507 Msa0813120:CDS 35.0%
TTATATTCTTGGAACAGGTC+GGG - chr5_3:43618489-43618508 Msa0813120:CDS 35.0%
GTTGATGTTAATCGTTCTAG+TGG - chr5_3:43618511-43618530 Msa0813120:CDS 35.0%
! CAAGATTTTGCTTGATGCAT+CGG - chr5_3:43618600-43618619 Msa0813120:CDS 35.0%
AAACAATCAAATCAACGGGT+CGG + chr5_3:43618657-43618676 None:intergenic 35.0%
AGCGAAACAATCAAATCAAC+GGG + chr5_3:43618661-43618680 None:intergenic 35.0%
CAGCGAAACAATCAAATCAA+CGG + chr5_3:43618662-43618681 None:intergenic 35.0%
CTATCTTCAATCAAAGGAAG+AGG - chr5_3:43618689-43618708 Msa0813120:CDS 35.0%
TCAATGTCATCAATTGTCTC+CGG + chr5_3:43618772-43618791 None:intergenic 35.0%
!!! GGATAATCTTTTGAAACACG+AGG + chr5_3:43618823-43618842 None:intergenic 35.0%
TCTCTTCCAGACATTAAGAA+TGG - chr5_3:43618853-43618872 Msa0813120:CDS 35.0%
CTCTTCCAGACATTAAGAAT+GGG - chr5_3:43618854-43618873 Msa0813120:CDS 35.0%
TACTGCTTCTACATTAGAGA+TGG - chr5_3:43619254-43619273 Msa0813120:CDS 35.0%
ACTGCTTCTACATTAGAGAT+GGG - chr5_3:43619255-43619274 Msa0813120:CDS 35.0%
! CAAACCTTGAAGACATTTTC+GGG - chr5_3:43619658-43619677 Msa0813120:CDS 35.0%
!! TGCAGATGCTGATTCATATT+CGG + chr5_3:43619786-43619805 None:intergenic 35.0%
CTGCAACAAAACTATTCTTC+AGG - chr5_3:43619801-43619820 Msa0813120:CDS 35.0%
!!! AGCCTTATGCTTTTTCTAAC+TGG - chr5_3:43619991-43620010 Msa0813120:CDS 35.0%
!!! GCCTTATGCTTTTTCTAACT+GGG - chr5_3:43619992-43620011 Msa0813120:CDS 35.0%
!!! CCTTATGCTTTTTCTAACTG+GGG - chr5_3:43619993-43620012 Msa0813120:CDS 35.0%
AGTCCAATCCAAATTTCCAT+CGG + chr5_3:43620024-43620043 None:intergenic 35.0%
! AATTTGGATTGGACTTCACA+CGG - chr5_3:43620029-43620048 Msa0813120:CDS 35.0%
CTGAGGAAATCATCTTCATT+TGG - chr5_3:43620068-43620087 Msa0813120:CDS 35.0%
AATCTGTTCCGTTGTTAAGA+TGG + chr5_3:43620253-43620272 None:intergenic 35.0%
GTCAAAAGGATTTGATCATG+GGG - chr5_3:43618233-43618252 Msa0813120:CDS 35.0%
TATGTGGATGGGAATAAAGA+AGG - chr5_3:43618262-43618281 Msa0813120:CDS 35.0%
ATGTGGATGGGAATAAAGAA+GGG - chr5_3:43618263-43618282 Msa0813120:CDS 35.0%
CTTATATTCTTGGAACAGGT+CGG - chr5_3:43618488-43618507 Msa0813120:CDS 35.0%
TTATATTCTTGGAACAGGTC+GGG - chr5_3:43618489-43618508 Msa0813120:CDS 35.0%
GTTGATGTTAATCGTTCTAG+TGG - chr5_3:43618511-43618530 Msa0813120:CDS 35.0%
! CAAGATTTTGCTTGATGCAT+CGG - chr5_3:43618600-43618619 Msa0813120:CDS 35.0%
AAACAATCAAATCAACGGGT+CGG + chr5_3:43618657-43618676 None:intergenic 35.0%
AGCGAAACAATCAAATCAAC+GGG + chr5_3:43618661-43618680 None:intergenic 35.0%
CAGCGAAACAATCAAATCAA+CGG + chr5_3:43618662-43618681 None:intergenic 35.0%
CTATCTTCAATCAAAGGAAG+AGG - chr5_3:43618689-43618708 Msa0813120:CDS 35.0%
TCAATGTCATCAATTGTCTC+CGG + chr5_3:43618772-43618791 None:intergenic 35.0%
!!! GGATAATCTTTTGAAACACG+AGG + chr5_3:43618823-43618842 None:intergenic 35.0%
TCTCTTCCAGACATTAAGAA+TGG - chr5_3:43618853-43618872 Msa0813120:CDS 35.0%
CTCTTCCAGACATTAAGAAT+GGG - chr5_3:43618854-43618873 Msa0813120:CDS 35.0%
TACTGCTTCTACATTAGAGA+TGG - chr5_3:43619254-43619273 Msa0813120:CDS 35.0%
ACTGCTTCTACATTAGAGAT+GGG - chr5_3:43619255-43619274 Msa0813120:CDS 35.0%
! CAAACCTTGAAGACATTTTC+GGG - chr5_3:43619658-43619677 Msa0813120:CDS 35.0%
!! TGCAGATGCTGATTCATATT+CGG + chr5_3:43619786-43619805 None:intergenic 35.0%
CTGCAACAAAACTATTCTTC+AGG - chr5_3:43619801-43619820 Msa0813120:CDS 35.0%
!!! AGCCTTATGCTTTTTCTAAC+TGG - chr5_3:43619991-43620010 Msa0813120:CDS 35.0%
!!! GCCTTATGCTTTTTCTAACT+GGG - chr5_3:43619992-43620011 Msa0813120:CDS 35.0%
!!! CCTTATGCTTTTTCTAACTG+GGG - chr5_3:43619993-43620012 Msa0813120:CDS 35.0%
AGTCCAATCCAAATTTCCAT+CGG + chr5_3:43620024-43620043 None:intergenic 35.0%
! AATTTGGATTGGACTTCACA+CGG - chr5_3:43620029-43620048 Msa0813120:CDS 35.0%
CTGAGGAAATCATCTTCATT+TGG - chr5_3:43620068-43620087 Msa0813120:CDS 35.0%
AATCTGTTCCGTTGTTAAGA+TGG + chr5_3:43620253-43620272 None:intergenic 35.0%
TAAAGAAGGGCAGTATCATG+AGG - chr5_3:43618276-43618295 Msa0813120:CDS 40.0%
TTGTGGTATGGAAGGAAAGT+TGG - chr5_3:43618391-43618410 Msa0813120:CDS 40.0%
!! GGTGTATCGGCTTATATTCT+TGG - chr5_3:43618478-43618497 Msa0813120:CDS 40.0%
TCGGCTTATATTCTTGGAAC+AGG - chr5_3:43618484-43618503 Msa0813120:CDS 40.0%
!! CGTTGATTTGATTGTTTCGC+TGG - chr5_3:43618660-43618679 Msa0813120:CDS 40.0%
! ATGCTACAAGCTCTTTTGGA+GGG - chr5_3:43618712-43618731 Msa0813120:CDS 40.0%
TCAGACATGTCTTCTGTTTC+CGG - chr5_3:43618750-43618769 Msa0813120:CDS 40.0%
!! TCAAAGTGAAGCCTTGTTCA+AGG - chr5_3:43618911-43618930 Msa0813120:CDS 40.0%
!! CAAAGTGAAGCCTTGTTCAA+GGG - chr5_3:43618912-43618931 Msa0813120:CDS 40.0%
TGAGAATATGCCCTTGAACA+AGG + chr5_3:43618925-43618944 None:intergenic 40.0%
! CAAGGGCATATTCTCATGAT+TGG - chr5_3:43618929-43618948 Msa0813120:CDS 40.0%
! TTTTCCCCTGGATGAACAAA+GGG + chr5_3:43618964-43618983 None:intergenic 40.0%
! ATTTTCCCCTGGATGAACAA+AGG + chr5_3:43618965-43618984 None:intergenic 40.0%
GATTCTTGTGACTATGCACA+CGG - chr5_3:43619066-43619085 Msa0813120:CDS 40.0%
! AGTTTGCTTCTTTGCTCACA+AGG - chr5_3:43619164-43619183 Msa0813120:CDS 40.0%
CTGTAATATGACCTAGGAGA+TGG + chr5_3:43619234-43619253 None:intergenic 40.0%
GCAGTACTGTAATATGACCT+AGG + chr5_3:43619240-43619259 None:intergenic 40.0%
TCAATTAGCCCAATGTCACT+TGG - chr5_3:43619279-43619298 Msa0813120:CDS 40.0%
ATGGAGAACCAAGTGACATT+GGG + chr5_3:43619290-43619309 None:intergenic 40.0%
ATGGAATGATTCCAGTTGGA+AGG + chr5_3:43619558-43619577 None:intergenic 40.0%
!! AAAAGATGGACTGTTAGGCA+TGG + chr5_3:43619577-43619596 None:intergenic 40.0%
! CGAAAACCTATTTAGTTCCC+CGG + chr5_3:43619625-43619644 None:intergenic 40.0%
! CGGGGAACTAAATAGGTTTT+CGG - chr5_3:43619623-43619642 Msa0813120:CDS 40.0%
! GGGGAACTAAATAGGTTTTC+GGG - chr5_3:43619624-43619643 Msa0813120:CDS 40.0%
! GGGAACTAAATAGGTTTTCG+GGG - chr5_3:43619625-43619644 Msa0813120:CDS 40.0%
! GGAACTAAATAGGTTTTCGG+GGG - chr5_3:43619626-43619645 Msa0813120:CDS 40.0%
CAGCATCAAGTGAAATTCTG+TGG + chr5_3:43619713-43619732 None:intergenic 40.0%
AGAATTTCACTTGATGCTGC+AGG - chr5_3:43619714-43619733 Msa0813120:CDS 40.0%
TCTCAGTTACAATCTCCAAC+TGG - chr5_3:43619747-43619766 Msa0813120:CDS 40.0%
GATTCATATTCGGACGCATT+TGG + chr5_3:43619776-43619795 None:intergenic 40.0%
CAATCACACTAGAAGTGGAA+TGG + chr5_3:43619827-43619846 None:intergenic 40.0%
CATTCCACTTCTAGTGTGAT+TGG - chr5_3:43619825-43619844 Msa0813120:CDS 40.0%
GATGGATCAAACCTATAGGT+TGG + chr5_3:43619855-43619874 None:intergenic 40.0%
ACCTATAGGTTTGATCCATC+TGG - chr5_3:43619855-43619874 Msa0813120:CDS 40.0%
CCTATAGGTTTGATCCATCT+GGG - chr5_3:43619856-43619875 Msa0813120:CDS 40.0%
CTATAGGTTTGATCCATCTG+GGG - chr5_3:43619857-43619876 Msa0813120:CDS 40.0%
GAGAATGAAGCTCAGAATGA+CGG + chr5_3:43619965-43619984 None:intergenic 40.0%
! GAAAAAGCATAAGGCTTAGC+AGG + chr5_3:43619987-43620006 None:intergenic 40.0%
! CCCCAGTTAGAAAAAGCATA+AGG + chr5_3:43619996-43620015 None:intergenic 40.0%
GTCCAATCCAAATTTCCATC+GGG + chr5_3:43620023-43620042 None:intergenic 40.0%
GAGAAGAACTGAATAAGCTG+AGG - chr5_3:43620051-43620070 Msa0813120:CDS 40.0%
ACTATGAACCAGATGTGTCT+TGG - chr5_3:43620147-43620166 Msa0813120:CDS 40.0%
CTATGAACCAGATGTGTCTT+GGG - chr5_3:43620148-43620167 Msa0813120:CDS 40.0%
GAATTAACCCAAGACACATC+TGG + chr5_3:43620158-43620177 None:intergenic 40.0%
CTAAACTGACGAGATTCTTG+CGG + chr5_3:43620200-43620219 None:intergenic 40.0%
CAACGGAACAGATTCAATTC+CGG - chr5_3:43620259-43620278 Msa0813120:CDS 40.0%
TTGGTTGGAGCAATTGTACA+TGG - chr5_3:43620283-43620302 Msa0813120:CDS 40.0%
TAAAGAAGGGCAGTATCATG+AGG - chr5_3:43618276-43618295 Msa0813120:CDS 40.0%
TTGTGGTATGGAAGGAAAGT+TGG - chr5_3:43618391-43618410 Msa0813120:CDS 40.0%
!! GGTGTATCGGCTTATATTCT+TGG - chr5_3:43618478-43618497 Msa0813120:CDS 40.0%
TCGGCTTATATTCTTGGAAC+AGG - chr5_3:43618484-43618503 Msa0813120:CDS 40.0%
!! CGTTGATTTGATTGTTTCGC+TGG - chr5_3:43618660-43618679 Msa0813120:CDS 40.0%
! ATGCTACAAGCTCTTTTGGA+GGG - chr5_3:43618712-43618731 Msa0813120:CDS 40.0%
TCAGACATGTCTTCTGTTTC+CGG - chr5_3:43618750-43618769 Msa0813120:CDS 40.0%
!! TCAAAGTGAAGCCTTGTTCA+AGG - chr5_3:43618911-43618930 Msa0813120:CDS 40.0%
!! CAAAGTGAAGCCTTGTTCAA+GGG - chr5_3:43618912-43618931 Msa0813120:CDS 40.0%
TGAGAATATGCCCTTGAACA+AGG + chr5_3:43618925-43618944 None:intergenic 40.0%
! CAAGGGCATATTCTCATGAT+TGG - chr5_3:43618929-43618948 Msa0813120:CDS 40.0%
! TTTTCCCCTGGATGAACAAA+GGG + chr5_3:43618964-43618983 None:intergenic 40.0%
! ATTTTCCCCTGGATGAACAA+AGG + chr5_3:43618965-43618984 None:intergenic 40.0%
GATTCTTGTGACTATGCACA+CGG - chr5_3:43619066-43619085 Msa0813120:CDS 40.0%
! AGTTTGCTTCTTTGCTCACA+AGG - chr5_3:43619164-43619183 Msa0813120:CDS 40.0%
CTGTAATATGACCTAGGAGA+TGG + chr5_3:43619234-43619253 None:intergenic 40.0%
GCAGTACTGTAATATGACCT+AGG + chr5_3:43619240-43619259 None:intergenic 40.0%
TCAATTAGCCCAATGTCACT+TGG - chr5_3:43619279-43619298 Msa0813120:CDS 40.0%
ATGGAGAACCAAGTGACATT+GGG + chr5_3:43619290-43619309 None:intergenic 40.0%
ATGGAATGATTCCAGTTGGA+AGG + chr5_3:43619558-43619577 None:intergenic 40.0%
!! AAAAGATGGACTGTTAGGCA+TGG + chr5_3:43619577-43619596 None:intergenic 40.0%
! CGAAAACCTATTTAGTTCCC+CGG + chr5_3:43619625-43619644 None:intergenic 40.0%
! CGGGGAACTAAATAGGTTTT+CGG - chr5_3:43619623-43619642 Msa0813120:CDS 40.0%
! GGGGAACTAAATAGGTTTTC+GGG - chr5_3:43619624-43619643 Msa0813120:CDS 40.0%
! GGGAACTAAATAGGTTTTCG+GGG - chr5_3:43619625-43619644 Msa0813120:CDS 40.0%
! GGAACTAAATAGGTTTTCGG+GGG - chr5_3:43619626-43619645 Msa0813120:CDS 40.0%
CAGCATCAAGTGAAATTCTG+TGG + chr5_3:43619713-43619732 None:intergenic 40.0%
AGAATTTCACTTGATGCTGC+AGG - chr5_3:43619714-43619733 Msa0813120:CDS 40.0%
TCTCAGTTACAATCTCCAAC+TGG - chr5_3:43619747-43619766 Msa0813120:CDS 40.0%
GATTCATATTCGGACGCATT+TGG + chr5_3:43619776-43619795 None:intergenic 40.0%
CAATCACACTAGAAGTGGAA+TGG + chr5_3:43619827-43619846 None:intergenic 40.0%
CATTCCACTTCTAGTGTGAT+TGG - chr5_3:43619825-43619844 Msa0813120:CDS 40.0%
GATGGATCAAACCTATAGGT+TGG + chr5_3:43619855-43619874 None:intergenic 40.0%
ACCTATAGGTTTGATCCATC+TGG - chr5_3:43619855-43619874 Msa0813120:CDS 40.0%
CCTATAGGTTTGATCCATCT+GGG - chr5_3:43619856-43619875 Msa0813120:CDS 40.0%
CTATAGGTTTGATCCATCTG+GGG - chr5_3:43619857-43619876 Msa0813120:CDS 40.0%
GAGAATGAAGCTCAGAATGA+CGG + chr5_3:43619965-43619984 None:intergenic 40.0%
! GAAAAAGCATAAGGCTTAGC+AGG + chr5_3:43619987-43620006 None:intergenic 40.0%
! CCCCAGTTAGAAAAAGCATA+AGG + chr5_3:43619996-43620015 None:intergenic 40.0%
GTCCAATCCAAATTTCCATC+GGG + chr5_3:43620023-43620042 None:intergenic 40.0%
GAGAAGAACTGAATAAGCTG+AGG - chr5_3:43620051-43620070 Msa0813120:CDS 40.0%
ACTATGAACCAGATGTGTCT+TGG - chr5_3:43620147-43620166 Msa0813120:CDS 40.0%
CTATGAACCAGATGTGTCTT+GGG - chr5_3:43620148-43620167 Msa0813120:CDS 40.0%
GAATTAACCCAAGACACATC+TGG + chr5_3:43620158-43620177 None:intergenic 40.0%
CTAAACTGACGAGATTCTTG+CGG + chr5_3:43620200-43620219 None:intergenic 40.0%
CAACGGAACAGATTCAATTC+CGG - chr5_3:43620259-43620278 Msa0813120:CDS 40.0%
TTGGTTGGAGCAATTGTACA+TGG - chr5_3:43620283-43620302 Msa0813120:CDS 40.0%
TCAGCTGCAGATGATGTGAT+TGG - chr5_3:43618319-43618338 Msa0813120:CDS 45.0%
ACATAGCAGCAACCATGAGA+GGG + chr5_3:43618447-43618466 None:intergenic 45.0%
TACATAGCAGCAACCATGAG+AGG + chr5_3:43618448-43618467 None:intergenic 45.0%
CTCATGGTTGCTGCTATGTA+TGG - chr5_3:43618448-43618467 Msa0813120:CDS 45.0%
TGCTGCTATGTATGGAAGCT+TGG - chr5_3:43618456-43618475 Msa0813120:CDS 45.0%
GCTGCTATGTATGGAAGCTT+GGG - chr5_3:43618457-43618476 Msa0813120:CDS 45.0%
GTATGGAAGCTTGGGTGTAT+CGG - chr5_3:43618465-43618484 Msa0813120:CDS 45.0%
! AATCGTTCTAGTGGATCCGA+TGG - chr5_3:43618520-43618539 Msa0813120:CDS 45.0%
ATGAAGAGCAGTAGCACCAT+CGG + chr5_3:43618539-43618558 None:intergenic 45.0%
TGCTACTGCTCTTCATTGTG+CGG - chr5_3:43618543-43618562 Msa0813120:CDS 45.0%
CTCTTCATTGTGCGGTTGTT+GGG - chr5_3:43618551-43618570 Msa0813120:CDS 45.0%
TCTTCATTGTGCGGTTGTTG+GGG - chr5_3:43618552-43618571 Msa0813120:CDS 45.0%
! GATTTTGCTTGATGCATCGG+CGG - chr5_3:43618603-43618622 Msa0813120:CDS 45.0%
! GAGGATGCTACAAGCTCTTT+TGG - chr5_3:43618708-43618727 Msa0813120:CDS 45.0%
! GATGCTACAAGCTCTTTTGG+AGG - chr5_3:43618711-43618730 Msa0813120:CDS 45.0%
TCTGGAAGAGAGACATCAAC+AGG + chr5_3:43618844-43618863 None:intergenic 45.0%
TGGATGAACAAAGGGACACT+CGG + chr5_3:43618956-43618975 None:intergenic 45.0%
AGTGTCCCTTTGTTCATCCA+GGG - chr5_3:43618956-43618975 Msa0813120:CDS 45.0%
TTCATCCAGGGGAAAATGCA+AGG - chr5_3:43618968-43618987 Msa0813120:CDS 45.0%
CTTTCCGAAACTCAGGACAA+GGG + chr5_3:43619029-43619048 None:intergenic 45.0%
!!! CACACGGTATTTTTGAGTGC+TGG - chr5_3:43619082-43619101 Msa0813120:CDS 45.0%
ATCCTGCGCAGTATAAGACA+CGG - chr5_3:43619109-43619128 Msa0813120:CDS 45.0%
GTATAAGACACGGCTTTGCA+AGG - chr5_3:43619119-43619138 Msa0813120:CDS 45.0%
! AACCGGTAGAAGCATACAAG+GGG + chr5_3:43619203-43619222 None:intergenic 45.0%
! GAACCGGTAGAAGCATACAA+GGG + chr5_3:43619204-43619223 None:intergenic 45.0%
! AGAACCGGTAGAAGCATACA+AGG + chr5_3:43619205-43619224 None:intergenic 45.0%
AGGAGATGGAATAGCAGAAC+CGG + chr5_3:43619220-43619239 None:intergenic 45.0%
GTTCTGCTATTCCATCTCCT+AGG - chr5_3:43619220-43619239 Msa0813120:CDS 45.0%
GATGGAGAACCAAGTGACAT+TGG + chr5_3:43619291-43619310 None:intergenic 45.0%
GAGGGTGGTATCAAAACAGA+TGG + chr5_3:43619309-43619328 None:intergenic 45.0%
GTAGGGATCGAAACATTAGG+CGG + chr5_3:43619399-43619418 None:intergenic 45.0%
AGGGTAGGGATCGAAACATT+AGG + chr5_3:43619402-43619421 None:intergenic 45.0%
!! TTTTGGGAAGCTGAAGGGTA+GGG + chr5_3:43619416-43619435 None:intergenic 45.0%
!! CCAGTCTTCAACCTGCTTTT+GGG + chr5_3:43619432-43619451 None:intergenic 45.0%
! TCCAGTCTTCAACCTGCTTT+TGG + chr5_3:43619433-43619452 None:intergenic 45.0%
TGCTTAGGGTTGAAACTCAG+CGG - chr5_3:43619487-43619506 Msa0813120:CDS 45.0%
! CTACTGATGGATGAGATGTC+CGG - chr5_3:43619522-43619541 Msa0813120:CDS 45.0%
ATGATTCCAGTTGGAAGGAG+AGG + chr5_3:43619553-43619572 None:intergenic 45.0%
AGGCATGGAATGATTCCAGT+TGG + chr5_3:43619562-43619581 None:intergenic 45.0%
! GCCTAACAGTCCATCTTTTC+CGG - chr5_3:43619578-43619597 Msa0813120:CDS 45.0%
!! ACCGGAAAAGATGGACTGTT+AGG + chr5_3:43619582-43619601 None:intergenic 45.0%
GTCGAAGAAACCGGAAAAGA+TGG + chr5_3:43619591-43619610 None:intergenic 45.0%
! GTATGGTTGGTCGAAGAAAC+CGG + chr5_3:43619600-43619619 None:intergenic 45.0%
! TATTTAGTTCCCCGGTCGTA+TGG + chr5_3:43619617-43619636 None:intergenic 45.0%
ATACGACCGGGGAACTAAAT+AGG - chr5_3:43619616-43619635 Msa0813120:CDS 45.0%
GAGACCCGAAAATGTCTTCA+AGG + chr5_3:43619665-43619684 None:intergenic 45.0%
CGATCCAATCACACTAGAAG+TGG + chr5_3:43619832-43619851 None:intergenic 45.0%
TGATTGGATCGCCAACCTAT+AGG - chr5_3:43619841-43619860 Msa0813120:CDS 45.0%
CCCAGATGGATCAAACCTAT+AGG + chr5_3:43619859-43619878 None:intergenic 45.0%
CACCCGATGGAAATTTGGAT+TGG - chr5_3:43620018-43620037 Msa0813120:CDS 45.0%
!! TGGAGTTAAAGGAGTACTGG+TGG + chr5_3:43620102-43620121 None:intergenic 45.0%
! AGCTGGAGTTAAAGGAGTAC+TGG + chr5_3:43620105-43620124 None:intergenic 45.0%
TTTAACTCCAGCTGCAGCTA+GGG - chr5_3:43620112-43620131 Msa0813120:CDS 45.0%
GAACAGATTCAATTCCGGCT+TGG - chr5_3:43620264-43620283 Msa0813120:CDS 45.0%
!! AGATTCAATTCCGGCTTGGT+TGG - chr5_3:43620268-43620287 Msa0813120:CDS 45.0%
TACAATTGCTCCAACCAAGC+CGG + chr5_3:43620281-43620300 None:intergenic 45.0%
GGAGCAATTGTACATGGATC+AGG - chr5_3:43620289-43620308 Msa0813120:CDS 45.0%
TCAGCTGCAGATGATGTGAT+TGG - chr5_3:43618319-43618338 Msa0813120:CDS 45.0%
ACATAGCAGCAACCATGAGA+GGG + chr5_3:43618447-43618466 None:intergenic 45.0%
TACATAGCAGCAACCATGAG+AGG + chr5_3:43618448-43618467 None:intergenic 45.0%
CTCATGGTTGCTGCTATGTA+TGG - chr5_3:43618448-43618467 Msa0813120:CDS 45.0%
TGCTGCTATGTATGGAAGCT+TGG - chr5_3:43618456-43618475 Msa0813120:CDS 45.0%
GCTGCTATGTATGGAAGCTT+GGG - chr5_3:43618457-43618476 Msa0813120:CDS 45.0%
GTATGGAAGCTTGGGTGTAT+CGG - chr5_3:43618465-43618484 Msa0813120:CDS 45.0%
! AATCGTTCTAGTGGATCCGA+TGG - chr5_3:43618520-43618539 Msa0813120:CDS 45.0%
ATGAAGAGCAGTAGCACCAT+CGG + chr5_3:43618539-43618558 None:intergenic 45.0%
TGCTACTGCTCTTCATTGTG+CGG - chr5_3:43618543-43618562 Msa0813120:CDS 45.0%
CTCTTCATTGTGCGGTTGTT+GGG - chr5_3:43618551-43618570 Msa0813120:CDS 45.0%
TCTTCATTGTGCGGTTGTTG+GGG - chr5_3:43618552-43618571 Msa0813120:CDS 45.0%
! GATTTTGCTTGATGCATCGG+CGG - chr5_3:43618603-43618622 Msa0813120:CDS 45.0%
! GAGGATGCTACAAGCTCTTT+TGG - chr5_3:43618708-43618727 Msa0813120:CDS 45.0%
! GATGCTACAAGCTCTTTTGG+AGG - chr5_3:43618711-43618730 Msa0813120:CDS 45.0%
TCTGGAAGAGAGACATCAAC+AGG + chr5_3:43618844-43618863 None:intergenic 45.0%
TGGATGAACAAAGGGACACT+CGG + chr5_3:43618956-43618975 None:intergenic 45.0%
AGTGTCCCTTTGTTCATCCA+GGG - chr5_3:43618956-43618975 Msa0813120:CDS 45.0%
TTCATCCAGGGGAAAATGCA+AGG - chr5_3:43618968-43618987 Msa0813120:CDS 45.0%
CTTTCCGAAACTCAGGACAA+GGG + chr5_3:43619029-43619048 None:intergenic 45.0%
!!! CACACGGTATTTTTGAGTGC+TGG - chr5_3:43619082-43619101 Msa0813120:CDS 45.0%
ATCCTGCGCAGTATAAGACA+CGG - chr5_3:43619109-43619128 Msa0813120:CDS 45.0%
GTATAAGACACGGCTTTGCA+AGG - chr5_3:43619119-43619138 Msa0813120:CDS 45.0%
! AACCGGTAGAAGCATACAAG+GGG + chr5_3:43619203-43619222 None:intergenic 45.0%
! GAACCGGTAGAAGCATACAA+GGG + chr5_3:43619204-43619223 None:intergenic 45.0%
! AGAACCGGTAGAAGCATACA+AGG + chr5_3:43619205-43619224 None:intergenic 45.0%
AGGAGATGGAATAGCAGAAC+CGG + chr5_3:43619220-43619239 None:intergenic 45.0%
GTTCTGCTATTCCATCTCCT+AGG - chr5_3:43619220-43619239 Msa0813120:CDS 45.0%
GATGGAGAACCAAGTGACAT+TGG + chr5_3:43619291-43619310 None:intergenic 45.0%
GAGGGTGGTATCAAAACAGA+TGG + chr5_3:43619309-43619328 None:intergenic 45.0%
GTAGGGATCGAAACATTAGG+CGG + chr5_3:43619399-43619418 None:intergenic 45.0%
AGGGTAGGGATCGAAACATT+AGG + chr5_3:43619402-43619421 None:intergenic 45.0%
!! TTTTGGGAAGCTGAAGGGTA+GGG + chr5_3:43619416-43619435 None:intergenic 45.0%
!! CCAGTCTTCAACCTGCTTTT+GGG + chr5_3:43619432-43619451 None:intergenic 45.0%
! TCCAGTCTTCAACCTGCTTT+TGG + chr5_3:43619433-43619452 None:intergenic 45.0%
TGCTTAGGGTTGAAACTCAG+CGG - chr5_3:43619487-43619506 Msa0813120:CDS 45.0%
! CTACTGATGGATGAGATGTC+CGG - chr5_3:43619522-43619541 Msa0813120:CDS 45.0%
ATGATTCCAGTTGGAAGGAG+AGG + chr5_3:43619553-43619572 None:intergenic 45.0%
AGGCATGGAATGATTCCAGT+TGG + chr5_3:43619562-43619581 None:intergenic 45.0%
! GCCTAACAGTCCATCTTTTC+CGG - chr5_3:43619578-43619597 Msa0813120:CDS 45.0%
!! ACCGGAAAAGATGGACTGTT+AGG + chr5_3:43619582-43619601 None:intergenic 45.0%
GTCGAAGAAACCGGAAAAGA+TGG + chr5_3:43619591-43619610 None:intergenic 45.0%
! GTATGGTTGGTCGAAGAAAC+CGG + chr5_3:43619600-43619619 None:intergenic 45.0%
! TATTTAGTTCCCCGGTCGTA+TGG + chr5_3:43619617-43619636 None:intergenic 45.0%
ATACGACCGGGGAACTAAAT+AGG - chr5_3:43619616-43619635 Msa0813120:CDS 45.0%
GAGACCCGAAAATGTCTTCA+AGG + chr5_3:43619665-43619684 None:intergenic 45.0%
CGATCCAATCACACTAGAAG+TGG + chr5_3:43619832-43619851 None:intergenic 45.0%
TGATTGGATCGCCAACCTAT+AGG - chr5_3:43619841-43619860 Msa0813120:CDS 45.0%
CCCAGATGGATCAAACCTAT+AGG + chr5_3:43619859-43619878 None:intergenic 45.0%
CACCCGATGGAAATTTGGAT+TGG - chr5_3:43620018-43620037 Msa0813120:CDS 45.0%
!! TGGAGTTAAAGGAGTACTGG+TGG + chr5_3:43620102-43620121 None:intergenic 45.0%
! AGCTGGAGTTAAAGGAGTAC+TGG + chr5_3:43620105-43620124 None:intergenic 45.0%
TTTAACTCCAGCTGCAGCTA+GGG - chr5_3:43620112-43620131 Msa0813120:CDS 45.0%
GAACAGATTCAATTCCGGCT+TGG - chr5_3:43620264-43620283 Msa0813120:CDS 45.0%
!! AGATTCAATTCCGGCTTGGT+TGG - chr5_3:43620268-43620287 Msa0813120:CDS 45.0%
TACAATTGCTCCAACCAAGC+CGG + chr5_3:43620281-43620300 None:intergenic 45.0%
GGAGCAATTGTACATGGATC+AGG - chr5_3:43620289-43620308 Msa0813120:CDS 45.0%
GATCATGGGGTGTGAGTATG+TGG - chr5_3:43618246-43618265 Msa0813120:CDS 50.0%
ATGGGGTGTGAGTATGTGGA+TGG - chr5_3:43618250-43618269 Msa0813120:CDS 50.0%
TGGGGTGTGAGTATGTGGAT+GGG - chr5_3:43618251-43618270 Msa0813120:CDS 50.0%
!! ATGCTGATGGGGTTGGTTTG+TGG - chr5_3:43618374-43618393 Msa0813120:CDS 50.0%
!! GATGGGGTTGGTTTGTGGTA+TGG - chr5_3:43618379-43618398 Msa0813120:CDS 50.0%
!! GGGTTGGTTTGTGGTATGGA+AGG - chr5_3:43618383-43618402 Msa0813120:CDS 50.0%
CATAGCAGCAACCATGAGAG+GGG + chr5_3:43618446-43618465 None:intergenic 50.0%
GCTCTTCATTGTGCGGTTGT+TGG - chr5_3:43618550-43618569 Msa0813120:CDS 50.0%
CTTCATTGTGCGGTTGTTGG+GGG - chr5_3:43618553-43618572 Msa0813120:CDS 50.0%
! GCTAGTGCTGTTGATGCCAA+CGG - chr5_3:43618628-43618647 Msa0813120:CDS 50.0%
!! CAAGCTCTTTTGGAGGGTAC+TGG - chr5_3:43618718-43618737 Msa0813120:CDS 50.0%
GAGTGTCCCTTTGTTCATCC+AGG - chr5_3:43618955-43618974 Msa0813120:CDS 50.0%
GTGTCCCTTTGTTCATCCAG+GGG - chr5_3:43618957-43618976 Msa0813120:CDS 50.0%
GTGTCCCTTGTCCTGAGTTT+CGG - chr5_3:43619022-43619041 Msa0813120:CDS 50.0%
CCTTTCCGAAACTCAGGACA+AGG + chr5_3:43619030-43619049 None:intergenic 50.0%
CCTTGTCCTGAGTTTCGGAA+AGG - chr5_3:43619027-43619046 Msa0813120:CDS 50.0%
CACGATCCTTTCCGAAACTC+AGG + chr5_3:43619036-43619055 None:intergenic 50.0%
CGGAAAGGATCGTGCAGTAA+AGG - chr5_3:43619042-43619061 Msa0813120:CDS 50.0%
CTTCTTTGCTCACAAGGTCG+AGG - chr5_3:43619170-43619189 Msa0813120:CDS 50.0%
GCTCCAGATGAAGTCAAAGG+CGG + chr5_3:43619339-43619358 None:intergenic 50.0%
GACGCTCCAGATGAAGTCAA+AGG + chr5_3:43619342-43619361 None:intergenic 50.0%
!! CTTTTGGGAAGCTGAAGGGT+AGG + chr5_3:43619417-43619436 None:intergenic 50.0%
!! CCTGCTTTTGGGAAGCTGAA+GGG + chr5_3:43619421-43619440 None:intergenic 50.0%
!! ACCTGCTTTTGGGAAGCTGA+AGG + chr5_3:43619422-43619441 None:intergenic 50.0%
! CCCAAAAGCAGGTTGAAGAC+TGG - chr5_3:43619429-43619448 Msa0813120:CDS 50.0%
GCGAAAGCAGCAACTACTGA+TGG - chr5_3:43619509-43619528 Msa0813120:CDS 50.0%
GTTGGAAGGAGAGGAAAGAC+CGG + chr5_3:43619544-43619563 None:intergenic 50.0%
GTCTTTCCTCTCCTTCCAAC+TGG - chr5_3:43619544-43619563 Msa0813120:CDS 50.0%
TCTTCGACCAACCATACGAC+CGG - chr5_3:43619603-43619622 Msa0813120:CDS 50.0%
GGACGCATTTGGATTCCAGT+TGG + chr5_3:43619765-43619784 None:intergenic 50.0%
TCTTGCATTCAAAGCCGACG+CGG + chr5_3:43619889-43619908 None:intergenic 50.0%
! GAGCTGCTGCCTTTTCAAAG+CGG - chr5_3:43619907-43619926 Msa0813120:CDS 50.0%
CTAGCTGCAGCTGGAGTTAA+AGG + chr5_3:43620113-43620132 None:intergenic 50.0%
CTTTAACTCCAGCTGCAGCT+AGG - chr5_3:43620111-43620130 Msa0813120:CDS 50.0%
CTGCAGCGCCATCTTAACAA+CGG - chr5_3:43620242-43620261 Msa0813120:CDS 50.0%
GATCATGGGGTGTGAGTATG+TGG - chr5_3:43618246-43618265 Msa0813120:CDS 50.0%
ATGGGGTGTGAGTATGTGGA+TGG - chr5_3:43618250-43618269 Msa0813120:CDS 50.0%
TGGGGTGTGAGTATGTGGAT+GGG - chr5_3:43618251-43618270 Msa0813120:CDS 50.0%
!! ATGCTGATGGGGTTGGTTTG+TGG - chr5_3:43618374-43618393 Msa0813120:CDS 50.0%
!! GATGGGGTTGGTTTGTGGTA+TGG - chr5_3:43618379-43618398 Msa0813120:CDS 50.0%
!! GGGTTGGTTTGTGGTATGGA+AGG - chr5_3:43618383-43618402 Msa0813120:CDS 50.0%
CATAGCAGCAACCATGAGAG+GGG + chr5_3:43618446-43618465 None:intergenic 50.0%
GCTCTTCATTGTGCGGTTGT+TGG - chr5_3:43618550-43618569 Msa0813120:CDS 50.0%
CTTCATTGTGCGGTTGTTGG+GGG - chr5_3:43618553-43618572 Msa0813120:CDS 50.0%
! GCTAGTGCTGTTGATGCCAA+CGG - chr5_3:43618628-43618647 Msa0813120:CDS 50.0%
!! CAAGCTCTTTTGGAGGGTAC+TGG - chr5_3:43618718-43618737 Msa0813120:CDS 50.0%
GAGTGTCCCTTTGTTCATCC+AGG - chr5_3:43618955-43618974 Msa0813120:CDS 50.0%
GTGTCCCTTTGTTCATCCAG+GGG - chr5_3:43618957-43618976 Msa0813120:CDS 50.0%
GTGTCCCTTGTCCTGAGTTT+CGG - chr5_3:43619022-43619041 Msa0813120:CDS 50.0%
CCTTTCCGAAACTCAGGACA+AGG + chr5_3:43619030-43619049 None:intergenic 50.0%
CCTTGTCCTGAGTTTCGGAA+AGG - chr5_3:43619027-43619046 Msa0813120:CDS 50.0%
CACGATCCTTTCCGAAACTC+AGG + chr5_3:43619036-43619055 None:intergenic 50.0%
CGGAAAGGATCGTGCAGTAA+AGG - chr5_3:43619042-43619061 Msa0813120:CDS 50.0%
CTTCTTTGCTCACAAGGTCG+AGG - chr5_3:43619170-43619189 Msa0813120:CDS 50.0%
GCTCCAGATGAAGTCAAAGG+CGG + chr5_3:43619339-43619358 None:intergenic 50.0%
GACGCTCCAGATGAAGTCAA+AGG + chr5_3:43619342-43619361 None:intergenic 50.0%
!! CTTTTGGGAAGCTGAAGGGT+AGG + chr5_3:43619417-43619436 None:intergenic 50.0%
!! CCTGCTTTTGGGAAGCTGAA+GGG + chr5_3:43619421-43619440 None:intergenic 50.0%
!! ACCTGCTTTTGGGAAGCTGA+AGG + chr5_3:43619422-43619441 None:intergenic 50.0%
! CCCAAAAGCAGGTTGAAGAC+TGG - chr5_3:43619429-43619448 Msa0813120:CDS 50.0%
GCGAAAGCAGCAACTACTGA+TGG - chr5_3:43619509-43619528 Msa0813120:CDS 50.0%
GTTGGAAGGAGAGGAAAGAC+CGG + chr5_3:43619544-43619563 None:intergenic 50.0%
GTCTTTCCTCTCCTTCCAAC+TGG - chr5_3:43619544-43619563 Msa0813120:CDS 50.0%
TCTTCGACCAACCATACGAC+CGG - chr5_3:43619603-43619622 Msa0813120:CDS 50.0%
GGACGCATTTGGATTCCAGT+TGG + chr5_3:43619765-43619784 None:intergenic 50.0%
TCTTGCATTCAAAGCCGACG+CGG + chr5_3:43619889-43619908 None:intergenic 50.0%
! GAGCTGCTGCCTTTTCAAAG+CGG - chr5_3:43619907-43619926 Msa0813120:CDS 50.0%
CTAGCTGCAGCTGGAGTTAA+AGG + chr5_3:43620113-43620132 None:intergenic 50.0%
CTTTAACTCCAGCTGCAGCT+AGG - chr5_3:43620111-43620130 Msa0813120:CDS 50.0%
CTGCAGCGCCATCTTAACAA+CGG - chr5_3:43620242-43620261 Msa0813120:CDS 50.0%
AACGAGGGTTGCGATGCTGA+TGG - chr5_3:43618361-43618380 Msa0813120:CDS 55.0%
ACGAGGGTTGCGATGCTGAT+GGG - chr5_3:43618362-43618381 Msa0813120:CDS 55.0%
TGAAGAGAGGACCCCTCTCA+TGG - chr5_3:43618432-43618451 Msa0813120:CDS 55.0%
ATCAACGGGTCGGTTACCGT+TGG + chr5_3:43618647-43618666 None:intergenic 55.0%
!!! GCTCTTTTGGAGGGTACTGG+CGG - chr5_3:43618721-43618740 Msa0813120:CDS 55.0%
AGCCGTGTCTTATACTGCGC+AGG + chr5_3:43619114-43619133 None:intergenic 55.0%
CGCCCCTTGTATGCTTCTAC+CGG - chr5_3:43619198-43619217 Msa0813120:CDS 55.0%
TGAAGTCAAAGGCGGCGTTG+AGG + chr5_3:43619331-43619350 None:intergenic 55.0%
! ACGCCGCCTTTGACTTCATC+TGG - chr5_3:43619333-43619352 Msa0813120:CDS 55.0%
ATTAGGCGGTGTCTGCCACA+TGG + chr5_3:43619385-43619404 None:intergenic 55.0%
CCCTTCAGCTTCCCAAAAGC+AGG - chr5_3:43619418-43619437 Msa0813120:CDS 55.0%
CTTCGACCAACCATACGACC+GGG - chr5_3:43619604-43619623 Msa0813120:CDS 55.0%
TTCGACCAACCATACGACCG+GGG - chr5_3:43619605-43619624 Msa0813120:CDS 55.0%
TAGTTCCCCGGTCGTATGGT+TGG + chr5_3:43619613-43619632 None:intergenic 55.0%
ATCTGGGGAGTTATCCGCGT+CGG - chr5_3:43619872-43619891 Msa0813120:CDS 55.0%
!! GCTCTGGCTCCGCTTTGAAA+AGG + chr5_3:43619919-43619938 None:intergenic 55.0%
! AGCCAGAGCTTTATCGAGCG+CGG - chr5_3:43619930-43619949 Msa0813120:CDS 55.0%
GGGCTCACCCGATGGAAATT+TGG - chr5_3:43620013-43620032 Msa0813120:CDS 55.0%
AACGAGGGTTGCGATGCTGA+TGG - chr5_3:43618361-43618380 Msa0813120:CDS 55.0%
ACGAGGGTTGCGATGCTGAT+GGG - chr5_3:43618362-43618381 Msa0813120:CDS 55.0%
TGAAGAGAGGACCCCTCTCA+TGG - chr5_3:43618432-43618451 Msa0813120:CDS 55.0%
ATCAACGGGTCGGTTACCGT+TGG + chr5_3:43618647-43618666 None:intergenic 55.0%
!!! GCTCTTTTGGAGGGTACTGG+CGG - chr5_3:43618721-43618740 Msa0813120:CDS 55.0%
AGCCGTGTCTTATACTGCGC+AGG + chr5_3:43619114-43619133 None:intergenic 55.0%
CGCCCCTTGTATGCTTCTAC+CGG - chr5_3:43619198-43619217 Msa0813120:CDS 55.0%
TGAAGTCAAAGGCGGCGTTG+AGG + chr5_3:43619331-43619350 None:intergenic 55.0%
! ACGCCGCCTTTGACTTCATC+TGG - chr5_3:43619333-43619352 Msa0813120:CDS 55.0%
ATTAGGCGGTGTCTGCCACA+TGG + chr5_3:43619385-43619404 None:intergenic 55.0%
CCCTTCAGCTTCCCAAAAGC+AGG - chr5_3:43619418-43619437 Msa0813120:CDS 55.0%
CTTCGACCAACCATACGACC+GGG - chr5_3:43619604-43619623 Msa0813120:CDS 55.0%
TTCGACCAACCATACGACCG+GGG - chr5_3:43619605-43619624 Msa0813120:CDS 55.0%
TAGTTCCCCGGTCGTATGGT+TGG + chr5_3:43619613-43619632 None:intergenic 55.0%
ATCTGGGGAGTTATCCGCGT+CGG - chr5_3:43619872-43619891 Msa0813120:CDS 55.0%
!! GCTCTGGCTCCGCTTTGAAA+AGG + chr5_3:43619919-43619938 None:intergenic 55.0%
! AGCCAGAGCTTTATCGAGCG+CGG - chr5_3:43619930-43619949 Msa0813120:CDS 55.0%
GGGCTCACCCGATGGAAATT+TGG - chr5_3:43620013-43620032 Msa0813120:CDS 55.0%
CGAGGGTTGCGATGCTGATG+GGG - chr5_3:43618363-43618382 Msa0813120:CDS 60.0%
GGTTGCGATGCTGATGGGGT+TGG - chr5_3:43618367-43618386 Msa0813120:CDS 60.0%
! CGTCGCCTTGCATTTTCCCC+TGG + chr5_3:43618976-43618995 None:intergenic 60.0%
ATGCAAGGCGACGCGATCCA+AGG - chr5_3:43618983-43619002 Msa0813120:CDS 60.0%
! GTCAAAGGCGGCGTTGAGGA+GGG + chr5_3:43619327-43619346 None:intergenic 60.0%
! AGTCAAAGGCGGCGTTGAGG+AGG + chr5_3:43619328-43619347 None:intergenic 60.0%
CACATGGCTGCAGCAGCAAC+GGG + chr5_3:43619369-43619388 None:intergenic 60.0%
CCACATGGCTGCAGCAGCAA+CGG + chr5_3:43619370-43619389 None:intergenic 60.0%
CTTGATGCTGCAGGAGCAGC+AGG - chr5_3:43619723-43619742 Msa0813120:CDS 60.0%
GACGCGGATAACTCCCCAGA+TGG + chr5_3:43619873-43619892 None:intergenic 60.0%
CACCGCGCTCGATAAAGCTC+TGG + chr5_3:43619935-43619954 None:intergenic 60.0%
TCTAACTGGGGCTCACCCGA+TGG - chr5_3:43620005-43620024 Msa0813120:CDS 60.0%
CGAGGGTTGCGATGCTGATG+GGG - chr5_3:43618363-43618382 Msa0813120:CDS 60.0%
GGTTGCGATGCTGATGGGGT+TGG - chr5_3:43618367-43618386 Msa0813120:CDS 60.0%
! CGTCGCCTTGCATTTTCCCC+TGG + chr5_3:43618976-43618995 None:intergenic 60.0%
ATGCAAGGCGACGCGATCCA+AGG - chr5_3:43618983-43619002 Msa0813120:CDS 60.0%
! GTCAAAGGCGGCGTTGAGGA+GGG + chr5_3:43619327-43619346 None:intergenic 60.0%
! AGTCAAAGGCGGCGTTGAGG+AGG + chr5_3:43619328-43619347 None:intergenic 60.0%
CACATGGCTGCAGCAGCAAC+GGG + chr5_3:43619369-43619388 None:intergenic 60.0%
CCACATGGCTGCAGCAGCAA+CGG + chr5_3:43619370-43619389 None:intergenic 60.0%
CTTGATGCTGCAGGAGCAGC+AGG - chr5_3:43619723-43619742 Msa0813120:CDS 60.0%
GACGCGGATAACTCCCCAGA+TGG + chr5_3:43619873-43619892 None:intergenic 60.0%
CACCGCGCTCGATAAAGCTC+TGG + chr5_3:43619935-43619954 None:intergenic 60.0%
TCTAACTGGGGCTCACCCGA+TGG - chr5_3:43620005-43620024 Msa0813120:CDS 60.0%
! AAAGGCGGCGTTGAGGAGGG+TGG + chr5_3:43619324-43619343 None:intergenic 65.0%
CCGTTGCTGCTGCAGCCATG+TGG - chr5_3:43619367-43619386 Msa0813120:CDS 65.0%
TCCAGCTGCAGCTAGGGCAC+AGG - chr5_3:43620118-43620137 Msa0813120:CDS 65.0%
TCCTGTGCCCTAGCTGCAGC+TGG + chr5_3:43620122-43620141 None:intergenic 65.0%
! AAAGGCGGCGTTGAGGAGGG+TGG + chr5_3:43619324-43619343 None:intergenic 65.0%
CCGTTGCTGCTGCAGCCATG+TGG - chr5_3:43619367-43619386 Msa0813120:CDS 65.0%
TCCAGCTGCAGCTAGGGCAC+AGG - chr5_3:43620118-43620137 Msa0813120:CDS 65.0%
TCCTGTGCCCTAGCTGCAGC+TGG + chr5_3:43620122-43620141 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 43618205 43620328 43618205 ID=Msa0813120;Name=Msa0813120
chr5_3 mRNA 43618205 43620328 43618205 ID=Msa0813120-mRNA-1;Parent=Msa0813120;Name=Msa0813120-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|-1|0|1|-1|1|1|0|707
chr5_3 exon 43618205 43620328 43618205 ID=Msa0813120-mRNA-1:exon:13431;Parent=Msa0813120-mRNA-1
chr5_3 CDS 43618205 43620328 43618205 ID=Msa0813120-mRNA-1:cds;Parent=Msa0813120-mRNA-1
Gene Sequence

>Msa0813120

ATGTGCAGTGATTCTAAGAAAAAAACTTGTCAAAAGGATTTGATCATGGGGTGTGAGTATGTGGATGGGAATAAAGAAGGGCAGTATCATGAGGTTTCTTATTTGCTTGAACTTTCAGCTGCAGATGATGTGATTGGTTTAAAAAATGCGATTGAAAACGAGGGTTGCGATGCTGATGGGGTTGGTTTGTGGTATGGAAGGAAAGTTGGTTCGAACAAATTAGGTTATGAAGAGAGGACCCCTCTCATGGTTGCTGCTATGTATGGAAGCTTGGGTGTATCGGCTTATATTCTTGGAACAGGTCGGGTTGATGTTAATCGTTCTAGTGGATCCGATGGTGCTACTGCTCTTCATTGTGCGGTTGTTGGGGGTTCTGCTGCTTCCCCTGAGATTATCAAGATTTTGCTTGATGCATCGGCGGATGCTAGTGCTGTTGATGCCAACGGTAACCGACCCGTTGATTTGATTGTTTCGCTGGCCAATTCTATCTTCAATCAAAGGAAGAGGATGCTACAAGCTCTTTTGGAGGGTACTGGCGGTGCTGATCAGACATGTCTTCTGTTTCCGGAGACAATTGATGACATTGACGAATATCAAAGGCAAGATGTAAACACGCCTCGTGTTTCAAAAGATTATCCTGTTGATGTCTCTCTTCCAGACATTAAGAATGGGATATATAGTACCGATGAGTTTAGGATGTATACATTCAAAGTGAAGCCTTGTTCAAGGGCATATTCTCATGATTGGACCGAGTGTCCCTTTGTTCATCCAGGGGAAAATGCAAGGCGACGCGATCCAAGGAAATATCATTATAGCTGTGTCCCTTGTCCTGAGTTTCGGAAAGGATCGTGCAGTAAAGGAGATTCTTGTGACTATGCACACGGTATTTTTGAGTGCTGGCTTCATCCTGCGCAGTATAAGACACGGCTTTGCAAGGATGAGAGTTCGTGCATGAGAAGAGTTTGCTTCTTTGCTCACAAGGTCGAGGAGCTTCGCCCCTTGTATGCTTCTACCGGTTCTGCTATTCCATCTCCTAGGTCATATTACAGTACTGCTTCTACATTAGAGATGGGCTCAATTAGCCCAATGTCACTTGGTTCTCCATCTGTTTTGATACCACCCTCCTCAACGCCGCCTTTGACTTCATCTGGAGCGTCGTCTCCCGTTGCTGCTGCAGCCATGTGGCAGACACCGCCTAATGTTTCGATCCCTACCCTTCAGCTTCCCAAAAGCAGGTTGAAGACTGGAATGACCGCTAGAGATATTAATTCAGATATTGCAATGCTTAGGGTTGAAACTCAGCGGCGAAAGCAGCAACTACTGATGGATGAGATGTCCGGTCTTTCCTCTCCTTCCAACTGGAATCATTCCATGCCTAACAGTCCATCTTTTCCGGTTTCTTCGACCAACCATACGACCGGGGAACTAAATAGGTTTTCGGGGGTGAATCCTACAAACCTTGAAGACATTTTCGGGTCTCTTGATCCATCAATGTTGCATAAATTCCACAGAATTTCACTTGATGCTGCAGGAGCAGCAGGATCTCAGTTACAATCTCCAACTGGAATCCAAATGCGTCCGAATATGAATCAGCATCTGCAACAAAACTATTCTTCAGGCCATTCCACTTCTAGTGTGATTGGATCGCCAACCTATAGGTTTGATCCATCTGGGGAGTTATCCGCGTCGGCTTTGAATGCAAGAGCTGCTGCCTTTTCAAAGCGGAGCCAGAGCTTTATCGAGCGCGGTGTCACAAACCGTCATTCTGAGCTTCATTCTCCTGCTAAGCCTTATGCTTTTTCTAACTGGGGCTCACCCGATGGAAATTTGGATTGGACTTCACACGGAGAAGAACTGAATAAGCTGAGGAAATCATCTTCATTTGGATTTCGAACCACCAGTACTCCTTTAACTCCAGCTGCAGCTAGGGCACAGGAAAATGACTATGAACCAGATGTGTCTTGGGTTAATTCACTTGTAAAGGATGCTACGCCGCAAGAATCTCGTCAGTTTAGTGTTGAAGATCAGAAAAGGAAACTGCAGCGCCATCTTAACAACGGAACAGATTCAATTCCGGCTTGGTTGGAGCAATTGTACATGGATCAGGAGCAAATAGTGCAGTGA
Protein sequence

>Msa0813120

MCSDSKKKTCQKDLIMGCEYVDGNKEGQYHEVSYLLELSAADDVIGLKNAIENEGCDADGVGLWYGRKVGSNKLGYEERTPLMVAAMYGSLGVSAYILGTGRVDVNRSSGSDGATALHCAVVGGSAASPEIIKILLDASADASAVDANGNRPVDLIVSLANSIFNQRKRMLQALLEGTGGADQTCLLFPETIDDIDEYQRQDVNTPRVSKDYPVDVSLPDIKNGIYSTDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCSKGDSCDYAHGIFECWLHPAQYKTRLCKDESSCMRRVCFFAHKVEELRPLYASTGSAIPSPRSYYSTASTLEMGSISPMSLGSPSVLIPPSSTPPLTSSGASSPVAAAAMWQTPPNVSIPTLQLPKSRLKTGMTARDINSDIAMLRVETQRRKQQLLMDEMSGLSSPSNWNHSMPNSPSFPVSSTNHTTGELNRFSGVNPTNLEDIFGSLDPSMLHKFHRISLDAAGAAGSQLQSPTGIQMRPNMNQHLQQNYSSGHSTSSVIGSPTYRFDPSGELSASALNARAAAFSKRSQSFIERGVTNRHSELHSPAKPYAFSNWGSPDGNLDWTSHGEELNKLRKSSSFGFRTTSTPLTPAAARAQENDYEPDVSWVNSLVKDATPQESRQFSVEDQKRKLQRHLNNGTDSIPAWLEQLYMDQEQIVQ*