Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
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Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0815530 | sp|Q9FFI5|NAC86_ARATH | 41.304 | 552 | 213 | 20 | 1 | 544 | 1 | 449 | 8.89e-111 | 345 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0815530 | G7KFT9 | 91.091 | 651 | 50 | 2 | 1 | 650 | 1 | 644 | 0.0 | 1245 |
Gene ID | Type | Classification |
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Msa0815530 | TF | NAC |
Gene ID | Type | Classification |
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Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
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PPI
Gene1 | Gene2 | Type |
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Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0815530 | MtrunA17_Chr5g0433781 | 91.091 | 651 | 50 | 2 | 1 | 650 | 1 | 644 | 0.0 | 1245 |
Msa0815530 | MtrunA17_Chr3g0109821 | 62.704 | 673 | 221 | 18 | 1 | 649 | 1 | 667 | 0.0 | 794 |
Msa0815530 | MtrunA17_Chr6g0481091 | 68.715 | 179 | 54 | 1 | 1 | 177 | 1 | 179 | 5.80e-86 | 269 |
Msa0815530 | MtrunA17_Chr2g0309891 | 65.482 | 197 | 59 | 2 | 1 | 196 | 1 | 189 | 1.17e-85 | 272 |
Msa0815530 | MtrunA17_Chr5g0400461 | 64.417 | 163 | 48 | 2 | 1 | 156 | 1 | 160 | 1.69e-67 | 224 |
Msa0815530 | MtrunA17_Chr4g0054791 | 61.635 | 159 | 58 | 1 | 1 | 156 | 1 | 159 | 2.16e-64 | 215 |
Msa0815530 | MtrunA17_Chr2g0318081 | 56.329 | 158 | 67 | 1 | 1 | 158 | 11 | 166 | 8.36e-60 | 204 |
Msa0815530 | MtrunA17_Chr1g0201021 | 61.111 | 162 | 62 | 1 | 8 | 169 | 21 | 181 | 3.04e-59 | 208 |
Msa0815530 | MtrunA17_Chr3g0128111 | 51.852 | 189 | 90 | 1 | 9 | 196 | 45 | 233 | 4.96e-59 | 198 |
Msa0815530 | MtrunA17_Chr8g0372121 | 48.677 | 189 | 91 | 4 | 1 | 187 | 1 | 185 | 6.98e-59 | 200 |
Msa0815530 | MtrunA17_Chr8g0359921 | 57.500 | 160 | 64 | 2 | 1 | 158 | 9 | 166 | 1.65e-58 | 200 |
Msa0815530 | MtrunA17_Chr1g0200561 | 56.494 | 154 | 64 | 2 | 6 | 158 | 19 | 170 | 1.54e-57 | 198 |
Msa0815530 | MtrunA17_Chr5g0428991 | 61.589 | 151 | 58 | 0 | 6 | 156 | 25 | 175 | 4.34e-57 | 204 |
Msa0815530 | MtrunA17_Chr4g0017921 | 48.168 | 191 | 89 | 4 | 5 | 192 | 7 | 190 | 7.38e-57 | 196 |
Msa0815530 | MtrunA17_Chr3g0128151 | 51.980 | 202 | 85 | 3 | 5 | 196 | 21 | 220 | 1.39e-56 | 201 |
Msa0815530 | MtrunA17_Chr3g0124761 | 51.613 | 186 | 83 | 5 | 4 | 186 | 5 | 186 | 2.49e-56 | 192 |
Msa0815530 | MtrunA17_Chr4g0056541 | 53.125 | 160 | 72 | 2 | 6 | 164 | 7 | 164 | 3.27e-56 | 194 |
Msa0815530 | MtrunA17_Chr5g0405211 | 52.532 | 158 | 72 | 2 | 6 | 162 | 8 | 163 | 1.60e-55 | 192 |
Msa0815530 | MtrunA17_Chr6g0484441 | 57.895 | 152 | 60 | 2 | 6 | 157 | 5 | 152 | 6.89e-55 | 190 |
Msa0815530 | MtrunA17_Chr4g0018391 | 52.469 | 162 | 73 | 4 | 6 | 165 | 7 | 166 | 1.49e-54 | 189 |
Msa0815530 | MtrunA17_Chr5g0398971 | 54.902 | 153 | 66 | 3 | 6 | 156 | 7 | 158 | 3.59e-54 | 189 |
Msa0815530 | MtrunA17_Chr2g0318101 | 54.491 | 167 | 61 | 4 | 6 | 159 | 15 | 179 | 6.37e-54 | 188 |
Msa0815530 | MtrunA17_Chr4g0042561 | 54.088 | 159 | 67 | 2 | 2 | 156 | 5 | 161 | 8.13e-54 | 185 |
Msa0815530 | MtrunA17_Chr3g0130101 | 52.469 | 162 | 76 | 1 | 8 | 169 | 9 | 169 | 8.98e-54 | 188 |
Msa0815530 | MtrunA17_Chr2g0309331 | 52.903 | 155 | 69 | 3 | 4 | 156 | 8 | 160 | 1.02e-53 | 187 |
Msa0815530 | MtrunA17_Chr3g0092671 | 48.165 | 218 | 103 | 6 | 8 | 218 | 7 | 221 | 1.41e-53 | 192 |
Msa0815530 | MtrunA17_Chr1g0197351 | 58.642 | 162 | 61 | 2 | 4 | 159 | 40 | 201 | 1.52e-53 | 191 |
Msa0815530 | MtrunA17_Chr7g0252971 | 50.877 | 171 | 69 | 3 | 4 | 161 | 6 | 174 | 1.77e-53 | 186 |
Msa0815530 | MtrunA17_Chr8g0364791 | 51.479 | 169 | 81 | 1 | 1 | 169 | 1 | 168 | 4.75e-53 | 188 |
Msa0815530 | MtrunA17_Chr1g0197361 | 55.828 | 163 | 69 | 3 | 8 | 169 | 10 | 170 | 2.22e-52 | 190 |
Msa0815530 | MtrunA17_Chr5g0417791 | 52.500 | 160 | 70 | 2 | 4 | 159 | 1 | 158 | 2.88e-52 | 181 |
Msa0815530 | MtrunA17_Chr4g0060931 | 53.165 | 158 | 70 | 3 | 4 | 159 | 15 | 170 | 4.07e-52 | 183 |
Msa0815530 | MtrunA17_Chr7g0214071 | 56.774 | 155 | 58 | 4 | 4 | 156 | 13 | 160 | 4.65e-52 | 180 |
Msa0815530 | MtrunA17_Chr2g0316971 | 57.051 | 156 | 61 | 3 | 6 | 157 | 23 | 176 | 4.74e-52 | 184 |
Msa0815530 | MtrunA17_Chr6g0453451 | 53.416 | 161 | 61 | 3 | 6 | 159 | 20 | 173 | 5.33e-52 | 182 |
Msa0815530 | MtrunA17_Chr3g0091921 | 49.171 | 181 | 88 | 3 | 6 | 184 | 16 | 194 | 9.28e-52 | 181 |
Msa0815530 | MtrunA17_Chr3g0130731 | 54.375 | 160 | 67 | 4 | 4 | 160 | 5 | 161 | 1.08e-51 | 180 |
Msa0815530 | MtrunA17_Chr8g0384721 | 54.037 | 161 | 67 | 4 | 4 | 160 | 5 | 162 | 1.41e-51 | 179 |
Msa0815530 | MtrunA17_Chr6g0461661 | 49.398 | 166 | 78 | 3 | 3 | 164 | 15 | 178 | 1.61e-51 | 182 |
Msa0815530 | MtrunA17_Chr8g0346001 | 49.693 | 163 | 68 | 3 | 6 | 156 | 15 | 175 | 2.25e-51 | 183 |
Msa0815530 | MtrunA17_Chr1g0147421 | 55.769 | 156 | 62 | 4 | 5 | 157 | 26 | 177 | 2.37e-51 | 181 |
Msa0815530 | MtrunA17_Chr3g0139331 | 54.194 | 155 | 65 | 3 | 5 | 157 | 10 | 160 | 5.61e-51 | 180 |
Msa0815530 | MtrunA17_Chr4g0047841 | 50.847 | 177 | 60 | 4 | 6 | 157 | 15 | 189 | 8.01e-51 | 179 |
Msa0815530 | MtrunA17_Chr7g0253011 | 51.534 | 163 | 71 | 4 | 4 | 160 | 15 | 175 | 1.99e-50 | 179 |
Msa0815530 | MtrunA17_Chr6g0453131 | 49.708 | 171 | 72 | 4 | 6 | 164 | 15 | 183 | 4.96e-50 | 179 |
Msa0815530 | MtrunA17_Chr8g0384201 | 48.521 | 169 | 86 | 1 | 1 | 169 | 1 | 168 | 8.06e-50 | 181 |
Msa0815530 | MtrunA17_Chr2g0326361 | 53.165 | 158 | 66 | 4 | 5 | 156 | 13 | 168 | 1.29e-49 | 176 |
Msa0815530 | MtrunA17_Chr7g0263931 | 41.772 | 237 | 108 | 9 | 4 | 223 | 9 | 232 | 5.65e-49 | 174 |
Msa0815530 | MtrunA17_Chr4g0076731 | 52.288 | 153 | 68 | 3 | 8 | 159 | 56 | 204 | 2.22e-48 | 175 |
Msa0815530 | MtrunA17_Chr1g0183741 | 54.140 | 157 | 60 | 4 | 4 | 156 | 8 | 156 | 3.04e-48 | 170 |
Msa0815530 | MtrunA17_Chr8g0361731 | 45.238 | 168 | 79 | 3 | 8 | 164 | 16 | 181 | 1.09e-47 | 172 |
Msa0815530 | MtrunA17_Chr7g0261411 | 55.556 | 153 | 60 | 4 | 4 | 154 | 8 | 154 | 1.98e-47 | 169 |
Msa0815530 | MtrunA17_Chr2g0312321 | 51.220 | 164 | 75 | 4 | 1 | 163 | 6 | 165 | 2.32e-47 | 169 |
Msa0815530 | MtrunA17_Chr5g0417001 | 44.910 | 167 | 80 | 3 | 8 | 164 | 16 | 180 | 5.96e-47 | 170 |
Msa0815530 | MtrunA17_Chr7g0217721 | 55.725 | 131 | 56 | 1 | 4 | 134 | 17 | 145 | 5.83e-45 | 164 |
Msa0815530 | MtrunA17_Chr3g0144271 | 59.542 | 131 | 48 | 3 | 6 | 133 | 23 | 151 | 1.86e-44 | 164 |
Msa0815530 | MtrunA17_Chr2g0311661 | 48.193 | 166 | 70 | 4 | 8 | 158 | 23 | 187 | 6.49e-44 | 159 |
Msa0815530 | MtrunA17_Chr2g0311651 | 48.193 | 166 | 70 | 4 | 8 | 158 | 24 | 188 | 8.67e-44 | 159 |
Msa0815530 | MtrunA17_Chr7g0217711 | 54.198 | 131 | 58 | 1 | 4 | 134 | 17 | 145 | 2.37e-43 | 154 |
Msa0815530 | MtrunA17_Chr4g0038751 | 46.154 | 156 | 74 | 4 | 8 | 160 | 17 | 165 | 3.80e-42 | 154 |
Msa0815530 | MtrunA17_Chr8g0345671 | 51.316 | 152 | 65 | 4 | 6 | 154 | 11 | 156 | 1.45e-41 | 155 |
Msa0815530 | MtrunA17_Chr5g0442771 | 46.584 | 161 | 72 | 4 | 8 | 156 | 20 | 178 | 8.38e-41 | 151 |
Msa0815530 | MtrunA17_Chr2g0321741 | 52.344 | 128 | 53 | 3 | 26 | 153 | 12 | 131 | 5.29e-40 | 150 |
Msa0815530 | MtrunA17_Chr8g0385991 | 42.935 | 184 | 87 | 5 | 6 | 181 | 14 | 187 | 6.27e-40 | 146 |
Msa0815530 | MtrunA17_Chr3g0131911 | 45.342 | 161 | 74 | 3 | 6 | 156 | 14 | 170 | 1.97e-37 | 139 |
Msa0815530 | MtrunA17_Chr8g0345711 | 51.538 | 130 | 57 | 4 | 6 | 131 | 12 | 139 | 3.21e-37 | 136 |
Msa0815530 | MtrunA17_Chr8g0345691 | 46.711 | 152 | 72 | 4 | 6 | 154 | 12 | 157 | 4.44e-37 | 143 |
Msa0815530 | MtrunA17_Chr4g0026141 | 43.226 | 155 | 81 | 4 | 6 | 153 | 5 | 159 | 2.14e-36 | 137 |
Msa0815530 | MtrunA17_Chr2g0321631 | 43.226 | 155 | 80 | 4 | 7 | 153 | 5 | 159 | 1.53e-35 | 134 |
Msa0815530 | MtrunA17_Chr8g0345731 | 43.312 | 157 | 75 | 5 | 6 | 156 | 24 | 172 | 2.15e-33 | 125 |
Msa0815530 | MtrunA17_Chr7g0266701 | 40.361 | 166 | 87 | 6 | 6 | 160 | 4 | 168 | 2.39e-33 | 128 |
Msa0815530 | MtrunA17_Chr3g0113001 | 41.718 | 163 | 75 | 3 | 61 | 220 | 18 | 163 | 8.21e-31 | 122 |
Msa0815530 | MtrunA17_Chr8g0345701 | 43.448 | 145 | 62 | 5 | 4 | 131 | 5 | 146 | 2.97e-30 | 117 |
Msa0815530 | MtrunA17_Chr4g0050701 | 44.615 | 130 | 60 | 3 | 6 | 133 | 11 | 130 | 8.39e-30 | 116 |
Msa0815530 | MtrunA17_Chr8g0345741 | 46.610 | 118 | 59 | 3 | 17 | 131 | 2 | 118 | 1.82e-29 | 114 |
Msa0815530 | MtrunA17_Chr8g0345721 | 39.881 | 168 | 62 | 6 | 1 | 131 | 26 | 191 | 2.21e-29 | 115 |
Msa0815530 | MtrunA17_Chr3g0113031 | 39.610 | 154 | 72 | 2 | 71 | 220 | 3 | 139 | 3.65e-27 | 111 |
Msa0815530 | MtrunA17_Chr7g0243371 | 47.664 | 107 | 54 | 2 | 56 | 160 | 12 | 118 | 1.55e-25 | 101 |
Msa0815530 | MtrunA17_Chr8g0384351 | 31.863 | 204 | 108 | 8 | 2 | 201 | 6 | 182 | 6.75e-19 | 85.1 |
Msa0815530 | MtrunA17_Chr7g0251651 | 35.659 | 129 | 79 | 3 | 4 | 131 | 16 | 141 | 8.48e-19 | 85.1 |
Msa0815530 | MtrunA17_Chr7g0251661 | 34.351 | 131 | 82 | 3 | 2 | 131 | 6 | 133 | 7.70e-18 | 81.3 |
Msa0815530 | MtrunA17_Chr3g0130321 | 35.556 | 135 | 71 | 5 | 4 | 133 | 5 | 128 | 4.99e-16 | 77.4 |
Msa0815530 | MtrunA17_Chr7g0251671 | 33.071 | 127 | 81 | 3 | 6 | 131 | 10 | 133 | 3.46e-15 | 73.6 |
Msa0815530 | MtrunA17_Chr3g0113011 | 54.902 | 51 | 23 | 0 | 4 | 54 | 17 | 67 | 5.00e-14 | 67.4 |
Msa0815530 | MtrunA17_Chr3g0113041 | 50.000 | 54 | 27 | 0 | 4 | 57 | 17 | 70 | 1.31e-12 | 63.5 |
Msa0815530 | MtrunA17_Chr1g0194791 | 58.696 | 46 | 18 | 1 | 8 | 52 | 48 | 93 | 7.35e-12 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0815530 | AT1G65910.1 | 44.975 | 607 | 248 | 20 | 1 | 579 | 1 | 549 | 4.22e-150 | 449 |
Msa0815530 | AT5G17260.1 | 41.304 | 552 | 213 | 20 | 1 | 544 | 1 | 449 | 9.03e-112 | 345 |
Msa0815530 | AT3G03200.1 | 39.894 | 564 | 231 | 21 | 1 | 556 | 1 | 464 | 4.12e-111 | 343 |
Msa0815530 | AT3G17730.1 | 74.074 | 162 | 42 | 0 | 1 | 162 | 1 | 162 | 5.15e-87 | 272 |
Msa0815530 | AT1G54330.1 | 74.545 | 165 | 39 | 1 | 1 | 165 | 1 | 162 | 4.76e-82 | 261 |
Msa0815530 | AT4G17980.1 | 63.750 | 160 | 54 | 2 | 1 | 156 | 1 | 160 | 5.77e-69 | 226 |
Msa0815530 | AT4G17980.2 | 63.750 | 160 | 54 | 2 | 1 | 156 | 1 | 160 | 8.49e-69 | 226 |
Msa0815530 | AT5G46590.1 | 60.248 | 161 | 62 | 2 | 1 | 159 | 1 | 161 | 5.05e-66 | 219 |
Msa0815530 | AT5G46590.2 | 60.248 | 161 | 58 | 3 | 1 | 160 | 1 | 156 | 1.42e-61 | 207 |
Msa0815530 | AT1G32510.1 | 58.721 | 172 | 63 | 2 | 1 | 164 | 1 | 172 | 3.72e-61 | 206 |
Msa0815530 | AT4G27410.2 | 56.962 | 158 | 66 | 1 | 1 | 158 | 9 | 164 | 8.72e-61 | 205 |
Msa0815530 | AT5G04410.1 | 59.036 | 166 | 67 | 1 | 4 | 169 | 7 | 171 | 9.81e-61 | 213 |
Msa0815530 | AT3G10500.1 | 59.639 | 166 | 66 | 1 | 4 | 169 | 7 | 171 | 1.02e-60 | 212 |
Msa0815530 | AT3G10480.2 | 61.006 | 159 | 62 | 0 | 1 | 159 | 22 | 180 | 1.29e-60 | 209 |
Msa0815530 | AT3G15500.1 | 58.228 | 158 | 64 | 1 | 1 | 158 | 9 | 164 | 1.86e-60 | 205 |
Msa0815530 | AT3G10480.1 | 61.250 | 160 | 61 | 1 | 1 | 159 | 22 | 181 | 4.69e-60 | 208 |
Msa0815530 | AT3G10490.1 | 60.510 | 157 | 61 | 1 | 4 | 159 | 25 | 181 | 5.30e-59 | 198 |
Msa0815530 | AT1G33060.2 | 59.211 | 152 | 62 | 0 | 5 | 156 | 23 | 174 | 6.62e-59 | 209 |
Msa0815530 | AT1G33060.1 | 59.211 | 152 | 62 | 0 | 5 | 156 | 23 | 174 | 6.93e-59 | 209 |
Msa0815530 | AT1G52890.1 | 50.829 | 181 | 84 | 2 | 1 | 181 | 9 | 184 | 1.14e-58 | 200 |
Msa0815530 | AT5G24590.2 | 55.901 | 161 | 70 | 1 | 1 | 160 | 8 | 168 | 2.95e-58 | 203 |
Msa0815530 | AT4G35580.2 | 53.073 | 179 | 83 | 1 | 5 | 183 | 8 | 185 | 1.06e-57 | 204 |
Msa0815530 | AT4G35580.1 | 53.073 | 179 | 83 | 1 | 5 | 183 | 8 | 185 | 1.08e-57 | 203 |
Msa0815530 | AT4G35580.3 | 53.073 | 179 | 83 | 1 | 5 | 183 | 8 | 185 | 1.12e-57 | 204 |
Msa0815530 | AT4G27410.3 | 52.000 | 175 | 65 | 2 | 1 | 158 | 9 | 181 | 1.61e-57 | 197 |
Msa0815530 | AT1G34180.3 | 54.023 | 174 | 79 | 1 | 8 | 181 | 18 | 190 | 2.12e-57 | 201 |
Msa0815530 | AT3G10490.2 | 60.510 | 157 | 61 | 1 | 4 | 159 | 25 | 181 | 3.23e-57 | 200 |
Msa0815530 | AT1G34190.1 | 56.790 | 162 | 69 | 1 | 8 | 169 | 18 | 178 | 3.49e-57 | 203 |
Msa0815530 | AT3G04070.2 | 44.048 | 252 | 111 | 9 | 5 | 235 | 9 | 251 | 3.80e-57 | 197 |
Msa0815530 | AT1G71930.2 | 55.556 | 153 | 65 | 2 | 5 | 156 | 8 | 158 | 7.85e-57 | 195 |
Msa0815530 | AT1G71930.1 | 55.556 | 153 | 65 | 2 | 5 | 156 | 8 | 158 | 7.85e-57 | 195 |
Msa0815530 | AT3G18400.1 | 55.844 | 154 | 65 | 2 | 6 | 159 | 5 | 155 | 9.94e-57 | 195 |
Msa0815530 | AT1G33280.1 | 53.488 | 172 | 70 | 4 | 5 | 173 | 7 | 171 | 1.80e-56 | 194 |
Msa0815530 | AT1G34180.1 | 56.790 | 162 | 69 | 1 | 8 | 169 | 18 | 178 | 1.91e-56 | 201 |
Msa0815530 | AT4G10350.1 | 36.086 | 327 | 138 | 11 | 6 | 329 | 9 | 267 | 9.24e-56 | 193 |
Msa0815530 | AT2G18060.3 | 52.229 | 157 | 72 | 2 | 1 | 156 | 4 | 158 | 1.23e-55 | 193 |
Msa0815530 | AT2G18060.1 | 52.229 | 157 | 72 | 2 | 1 | 156 | 4 | 158 | 1.23e-55 | 193 |
Msa0815530 | AT3G49530.2 | 54.430 | 158 | 71 | 1 | 5 | 161 | 12 | 169 | 1.72e-55 | 194 |
Msa0815530 | AT4G36160.1 | 47.253 | 182 | 88 | 3 | 4 | 184 | 8 | 182 | 3.59e-55 | 192 |
Msa0815530 | AT4G36160.3 | 47.253 | 182 | 88 | 3 | 4 | 184 | 8 | 182 | 3.59e-55 | 192 |
Msa0815530 | AT5G66300.1 | 52.174 | 161 | 75 | 2 | 4 | 163 | 10 | 169 | 3.81e-55 | 190 |
Msa0815530 | AT4G36160.2 | 47.253 | 182 | 88 | 3 | 4 | 184 | 12 | 186 | 3.93e-55 | 192 |
Msa0815530 | AT3G49530.1 | 54.430 | 158 | 71 | 1 | 5 | 161 | 12 | 169 | 4.07e-55 | 195 |
Msa0815530 | AT2G24430.2 | 58.710 | 155 | 59 | 3 | 5 | 157 | 15 | 166 | 6.04e-55 | 190 |
Msa0815530 | AT2G24430.1 | 58.710 | 155 | 59 | 3 | 5 | 157 | 15 | 166 | 6.04e-55 | 190 |
Msa0815530 | AT3G04070.1 | 41.155 | 277 | 117 | 9 | 5 | 244 | 9 | 276 | 9.47e-55 | 191 |
Msa0815530 | AT3G10480.3 | 51.295 | 193 | 60 | 2 | 1 | 159 | 22 | 214 | 1.81e-54 | 194 |
Msa0815530 | AT1G12260.2 | 50.000 | 170 | 81 | 4 | 6 | 174 | 7 | 173 | 2.49e-54 | 189 |
Msa0815530 | AT1G34180.4 | 50.538 | 186 | 79 | 2 | 8 | 181 | 18 | 202 | 2.65e-54 | 192 |
Msa0815530 | AT1G12260.1 | 50.000 | 170 | 81 | 4 | 6 | 174 | 7 | 173 | 6.24e-54 | 190 |
Msa0815530 | AT5G64060.1 | 50.888 | 169 | 82 | 1 | 1 | 169 | 1 | 168 | 1.10e-53 | 188 |
Msa0815530 | AT1G01720.1 | 57.325 | 157 | 60 | 4 | 4 | 156 | 5 | 158 | 1.25e-53 | 186 |
Msa0815530 | AT1G62700.1 | 51.163 | 172 | 78 | 5 | 6 | 174 | 7 | 175 | 1.44e-53 | 189 |
Msa0815530 | AT1G62700.2 | 51.163 | 172 | 78 | 5 | 6 | 174 | 7 | 175 | 1.44e-53 | 189 |
Msa0815530 | AT1G34180.2 | 52.874 | 174 | 69 | 2 | 8 | 169 | 18 | 190 | 2.03e-53 | 193 |
Msa0815530 | AT5G39610.1 | 56.129 | 155 | 64 | 3 | 4 | 156 | 18 | 170 | 2.13e-53 | 185 |
Msa0815530 | AT1G79580.3 | 54.194 | 155 | 66 | 3 | 4 | 156 | 15 | 166 | 3.67e-53 | 187 |
Msa0815530 | AT1G79580.5 | 54.194 | 155 | 66 | 3 | 4 | 156 | 15 | 166 | 3.67e-53 | 187 |
Msa0815530 | AT1G79580.4 | 54.194 | 155 | 66 | 3 | 4 | 156 | 15 | 166 | 3.67e-53 | 187 |
Msa0815530 | AT1G79580.2 | 54.194 | 155 | 66 | 3 | 4 | 156 | 15 | 166 | 3.67e-53 | 187 |
Msa0815530 | AT1G79580.1 | 54.194 | 155 | 66 | 3 | 4 | 156 | 15 | 166 | 3.67e-53 | 187 |
Msa0815530 | AT1G77450.1 | 53.939 | 165 | 70 | 4 | 2 | 163 | 6 | 167 | 6.57e-53 | 182 |
Msa0815530 | AT5G53950.1 | 56.962 | 158 | 62 | 3 | 6 | 159 | 17 | 172 | 8.38e-53 | 186 |
Msa0815530 | AT1G69490.1 | 55.769 | 156 | 63 | 3 | 5 | 156 | 8 | 161 | 1.02e-52 | 182 |
Msa0815530 | AT5G07680.2 | 54.777 | 157 | 67 | 3 | 4 | 158 | 1 | 155 | 1.42e-52 | 184 |
Msa0815530 | AT5G07680.1 | 54.777 | 157 | 67 | 3 | 4 | 158 | 15 | 169 | 1.62e-52 | 184 |
Msa0815530 | AT3G29035.1 | 42.609 | 230 | 98 | 4 | 4 | 203 | 22 | 247 | 3.02e-52 | 183 |
Msa0815530 | AT5G62380.2 | 52.597 | 154 | 66 | 3 | 6 | 156 | 7 | 156 | 3.21e-52 | 184 |
Msa0815530 | AT5G62380.1 | 52.597 | 154 | 66 | 3 | 6 | 156 | 7 | 156 | 3.21e-52 | 184 |
Msa0815530 | AT5G61430.1 | 54.487 | 156 | 67 | 3 | 4 | 157 | 14 | 167 | 4.38e-52 | 183 |
Msa0815530 | AT3G15170.1 | 52.761 | 163 | 71 | 3 | 6 | 164 | 20 | 180 | 8.06e-52 | 181 |
Msa0815530 | AT5G18270.2 | 44.131 | 213 | 93 | 5 | 4 | 211 | 19 | 210 | 1.04e-51 | 182 |
Msa0815530 | AT5G08790.1 | 43.842 | 203 | 92 | 4 | 4 | 201 | 5 | 190 | 1.11e-51 | 180 |
Msa0815530 | AT5G09330.5 | 52.663 | 169 | 79 | 1 | 1 | 169 | 1 | 168 | 1.40e-51 | 186 |
Msa0815530 | AT5G09330.2 | 52.663 | 169 | 79 | 1 | 1 | 169 | 1 | 168 | 1.40e-51 | 186 |
Msa0815530 | AT5G09330.4 | 52.663 | 169 | 79 | 1 | 1 | 169 | 1 | 168 | 1.40e-51 | 186 |
Msa0815530 | AT5G09330.3 | 52.663 | 169 | 79 | 1 | 1 | 169 | 1 | 168 | 1.40e-51 | 186 |
Msa0815530 | AT5G09330.1 | 52.663 | 169 | 79 | 1 | 1 | 169 | 1 | 168 | 1.40e-51 | 186 |
Msa0815530 | AT1G32770.1 | 47.340 | 188 | 86 | 5 | 6 | 190 | 16 | 193 | 1.41e-51 | 182 |
Msa0815530 | AT5G18270.1 | 43.662 | 213 | 94 | 5 | 4 | 211 | 19 | 210 | 3.95e-51 | 180 |
Msa0815530 | AT3G12977.1 | 42.667 | 225 | 110 | 6 | 1 | 220 | 13 | 223 | 4.26e-51 | 178 |
Msa0815530 | AT1G61110.1 | 52.410 | 166 | 64 | 4 | 6 | 158 | 16 | 179 | 4.74e-51 | 180 |
Msa0815530 | AT2G46770.1 | 46.667 | 180 | 75 | 4 | 6 | 166 | 16 | 193 | 1.54e-50 | 180 |
Msa0815530 | AT3G61910.1 | 47.368 | 171 | 70 | 4 | 6 | 159 | 11 | 178 | 6.09e-50 | 177 |
Msa0815530 | AT1G56010.2 | 41.016 | 256 | 139 | 7 | 1 | 248 | 14 | 265 | 7.49e-50 | 176 |
Msa0815530 | AT2G33480.1 | 52.288 | 153 | 68 | 1 | 4 | 156 | 13 | 160 | 1.17e-49 | 174 |
Msa0815530 | AT2G02450.1 | 52.288 | 153 | 68 | 3 | 8 | 159 | 53 | 201 | 2.28e-49 | 177 |
Msa0815530 | AT2G02450.2 | 52.288 | 153 | 68 | 3 | 8 | 159 | 53 | 201 | 2.59e-49 | 177 |
Msa0815530 | AT5G63790.1 | 51.220 | 164 | 72 | 4 | 2 | 160 | 46 | 206 | 3.66e-49 | 174 |
Msa0815530 | AT2G33480.2 | 52.288 | 153 | 66 | 2 | 4 | 156 | 13 | 158 | 3.95e-49 | 172 |
Msa0815530 | AT1G76420.1 | 54.839 | 155 | 65 | 3 | 5 | 157 | 21 | 172 | 4.61e-49 | 175 |
Msa0815530 | AT5G63790.2 | 51.220 | 164 | 72 | 4 | 2 | 160 | 56 | 216 | 5.17e-49 | 174 |
Msa0815530 | AT5G22290.1 | 44.498 | 209 | 97 | 6 | 1 | 197 | 16 | 217 | 7.51e-49 | 174 |
Msa0815530 | AT3G04060.1 | 40.000 | 265 | 119 | 9 | 4 | 262 | 18 | 248 | 1.13e-48 | 174 |
Msa0815530 | AT3G15510.1 | 52.761 | 163 | 62 | 4 | 10 | 159 | 21 | 181 | 4.16e-48 | 173 |
Msa0815530 | AT3G44290.2 | 54.110 | 146 | 59 | 3 | 8 | 153 | 16 | 153 | 8.52e-48 | 168 |
Msa0815530 | AT2G27300.1 | 51.592 | 157 | 68 | 2 | 1 | 157 | 9 | 157 | 1.30e-47 | 171 |
Msa0815530 | AT5G13180.1 | 52.903 | 155 | 65 | 3 | 4 | 156 | 12 | 160 | 1.53e-47 | 168 |
Msa0815530 | AT2G17040.1 | 47.222 | 180 | 82 | 6 | 8 | 184 | 8 | 177 | 2.98e-47 | 168 |
Msa0815530 | AT3G44290.1 | 54.110 | 146 | 59 | 3 | 8 | 153 | 16 | 153 | 3.66e-47 | 169 |
Msa0815530 | AT1G32870.2 | 56.627 | 166 | 67 | 3 | 6 | 169 | 10 | 172 | 5.88e-47 | 174 |
Msa0815530 | AT1G32870.1 | 56.627 | 166 | 67 | 3 | 6 | 169 | 10 | 172 | 7.33e-47 | 174 |
Msa0815530 | AT1G32870.3 | 56.627 | 166 | 67 | 3 | 6 | 169 | 46 | 208 | 1.03e-46 | 174 |
Msa0815530 | AT2G43000.1 | 51.974 | 152 | 70 | 2 | 8 | 158 | 20 | 169 | 1.26e-46 | 166 |
Msa0815530 | AT1G26870.1 | 45.294 | 170 | 80 | 3 | 6 | 164 | 16 | 183 | 2.08e-46 | 170 |
Msa0815530 | AT5G39820.1 | 45.198 | 177 | 70 | 4 | 8 | 160 | 22 | 195 | 7.04e-46 | 166 |
Msa0815530 | AT4G28530.1 | 43.290 | 231 | 93 | 9 | 6 | 217 | 10 | 221 | 4.15e-45 | 164 |
Msa0815530 | AT1G52880.1 | 51.205 | 166 | 67 | 5 | 10 | 163 | 21 | 184 | 5.89e-43 | 157 |
Msa0815530 | AT5G04395.1 | 46.000 | 150 | 67 | 2 | 2 | 137 | 24 | 173 | 1.76e-40 | 146 |
Msa0815530 | AT3G12910.1 | 45.238 | 168 | 70 | 6 | 8 | 157 | 23 | 186 | 5.85e-37 | 140 |
Msa0815530 | AT4G10350.2 | 31.461 | 267 | 117 | 9 | 63 | 329 | 20 | 220 | 2.31e-33 | 130 |
Msa0815530 | AT5G61430.2 | 58.763 | 97 | 38 | 2 | 63 | 157 | 8 | 104 | 4.99e-32 | 125 |
Msa0815530 | AT3G12977.2 | 55.670 | 97 | 42 | 1 | 63 | 158 | 20 | 116 | 7.06e-32 | 124 |
Msa0815530 | AT4G01520.1 | 42.105 | 152 | 78 | 5 | 7 | 153 | 5 | 151 | 2.77e-31 | 124 |
Msa0815530 | AT3G44350.2 | 40.260 | 154 | 87 | 4 | 9 | 157 | 8 | 161 | 1.33e-30 | 120 |
Msa0815530 | AT5G22380.1 | 41.447 | 152 | 82 | 5 | 9 | 153 | 8 | 159 | 3.74e-30 | 119 |
Msa0815530 | AT4G01550.1 | 40.698 | 172 | 84 | 5 | 9 | 176 | 7 | 164 | 6.17e-30 | 124 |
Msa0815530 | AT1G56010.1 | 54.545 | 99 | 42 | 1 | 63 | 158 | 8 | 106 | 2.02e-29 | 117 |
Msa0815530 | AT4G01540.2 | 41.333 | 150 | 78 | 5 | 9 | 153 | 7 | 151 | 2.86e-29 | 121 |
Msa0815530 | AT4G01540.4 | 40.909 | 154 | 81 | 5 | 9 | 157 | 7 | 155 | 2.92e-29 | 120 |
Msa0815530 | AT4G01540.3 | 40.667 | 150 | 79 | 4 | 9 | 153 | 7 | 151 | 3.18e-29 | 121 |
Msa0815530 | AT4G01540.1 | 41.333 | 150 | 78 | 5 | 9 | 153 | 7 | 151 | 4.93e-29 | 121 |
Msa0815530 | AT2G33480.3 | 53.191 | 94 | 44 | 0 | 63 | 156 | 10 | 103 | 1.33e-28 | 114 |
Msa0815530 | AT5G64530.2 | 42.537 | 134 | 61 | 4 | 4 | 135 | 1 | 120 | 3.91e-28 | 110 |
Msa0815530 | AT4G28530.2 | 54.545 | 110 | 30 | 3 | 6 | 98 | 10 | 116 | 8.58e-28 | 114 |
Msa0815530 | AT5G64530.1 | 43.182 | 132 | 59 | 4 | 4 | 133 | 1 | 118 | 9.12e-28 | 110 |
Msa0815530 | AT3G44350.1 | 39.310 | 145 | 83 | 4 | 9 | 148 | 8 | 152 | 2.46e-27 | 108 |
Msa0815530 | AT3G04420.2 | 36.774 | 155 | 91 | 2 | 7 | 159 | 4 | 153 | 4.78e-27 | 112 |
Msa0815530 | AT1G02230.1 | 40.132 | 152 | 79 | 5 | 7 | 153 | 4 | 148 | 1.06e-26 | 112 |
Msa0815530 | AT3G04420.1 | 36.774 | 155 | 91 | 2 | 7 | 159 | 4 | 153 | 1.96e-26 | 111 |
Msa0815530 | AT1G02250.1 | 38.961 | 154 | 78 | 6 | 7 | 153 | 4 | 148 | 3.59e-24 | 105 |
Msa0815530 | AT3G10490.4 | 61.250 | 80 | 30 | 1 | 81 | 159 | 2 | 81 | 8.76e-24 | 103 |
Msa0815530 | AT3G10490.3 | 61.250 | 80 | 30 | 1 | 81 | 159 | 2 | 81 | 8.76e-24 | 103 |
Msa0815530 | AT1G01010.1 | 37.419 | 155 | 80 | 5 | 9 | 153 | 6 | 153 | 1.31e-22 | 101 |
Msa0815530 | AT1G02220.1 | 34.437 | 151 | 87 | 4 | 7 | 154 | 4 | 145 | 9.04e-22 | 98.6 |
Msa0815530 | AT2G43000.2 | 48.889 | 90 | 45 | 1 | 70 | 158 | 2 | 91 | 1.01e-20 | 91.3 |
Msa0815530 | AT3G56530.1 | 32.237 | 152 | 98 | 3 | 4 | 153 | 50 | 198 | 1.12e-18 | 88.2 |
Msa0815530 | AT2G18060.2 | 45.070 | 71 | 37 | 1 | 86 | 156 | 2 | 70 | 4.00e-18 | 85.5 |
Msa0815530 | AT3G55210.1 | 32.919 | 161 | 90 | 5 | 6 | 153 | 11 | 166 | 7.81e-18 | 84.7 |
Msa0815530 | AT5G22290.2 | 41.463 | 123 | 54 | 5 | 87 | 197 | 2 | 118 | 3.16e-17 | 82.0 |
Msa0815530 | AT5G14000.2 | 31.818 | 132 | 84 | 2 | 4 | 133 | 13 | 140 | 3.69e-17 | 79.7 |
Msa0815530 | AT5G14000.1 | 31.818 | 132 | 84 | 2 | 4 | 133 | 13 | 140 | 3.42e-16 | 78.2 |
Msa0815530 | AT5G50820.1 | 33.582 | 134 | 75 | 4 | 4 | 133 | 15 | 138 | 6.76e-16 | 77.0 |
Msa0815530 | AT3G04430.1 | 35.606 | 132 | 71 | 5 | 12 | 131 | 6 | 135 | 2.22e-15 | 75.5 |
Msa0815530 | AT5G56620.3 | 31.548 | 168 | 79 | 7 | 4 | 139 | 41 | 204 | 1.98e-11 | 67.0 |
Msa0815530 | AT5G56620.2 | 31.548 | 168 | 79 | 7 | 4 | 139 | 41 | 204 | 2.02e-11 | 67.0 |
Msa0815530 | AT5G56620.1 | 31.548 | 168 | 79 | 7 | 4 | 139 | 41 | 204 | 2.30e-11 | 66.6 |
Msa0815530 | AT4G29230.3 | 31.250 | 160 | 83 | 6 | 4 | 139 | 46 | 202 | 5.36e-11 | 65.9 |
Msa0815530 | AT4G29230.1 | 31.481 | 162 | 80 | 7 | 4 | 139 | 46 | 202 | 6.98e-11 | 65.5 |
Msa0815530 | AT4G29230.2 | 31.481 | 162 | 80 | 7 | 4 | 139 | 45 | 201 | 7.28e-11 | 65.5 |
Find 164 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTTCTTCGTTTACTAATTA+TGG | 0.108851 | 5_3:-49152096 | Msa0815530:CDS |
TTTCATTGCCTCCAGGTTTC+AGG | 0.142642 | 5_3:-49155030 | Msa0815530:CDS |
TTTGATGCATCGTGTTTATT+TGG | 0.178984 | 5_3:-49149863 | Msa0815530:CDS |
CCCATGGCTCTCGTACAAAT+TGG | 0.222002 | 5_3:-49152833 | Msa0815530:CDS |
TCTCTCCCACTTTCTTCATT+TGG | 0.235874 | 5_3:-49155499 | Msa0815530:five_prime_UTR |
TTGTTGCTTATTATCTAAAT+AGG | 0.273542 | 5_3:-49154985 | Msa0815530:CDS |
ATCAAAGAAAATAGCAAGTT+TGG | 0.283752 | 5_3:-49149908 | Msa0815530:CDS |
GTGATTGGTCGCTTGTTATC+TGG | 0.291158 | 5_3:+49152304 | None:intergenic |
TCTATAGAGTGTTTATTGTT+TGG | 0.309883 | 5_3:+49150027 | None:intergenic |
CGCCTTCCAATATCCAGATT+TGG | 0.315171 | 5_3:+49152938 | None:intergenic |
TTCACTTAATCATGCTTCTC+AGG | 0.318478 | 5_3:-49151198 | Msa0815530:CDS |
TGAGATCATTGAGGAAATAA+AGG | 0.320384 | 5_3:-49150151 | Msa0815530:CDS |
GTGCAACCAAATCTGGATAT+TGG | 0.324516 | 5_3:-49152944 | Msa0815530:CDS |
ATCCAAGGCTTGTAAATAAC+TGG | 0.328844 | 5_3:+49151160 | None:intergenic |
TGTTTATTGTTTGGCATCAT+TGG | 0.334489 | 5_3:+49150036 | None:intergenic |
ACGAATCGTGCAACCAAATC+TGG | 0.338668 | 5_3:-49152951 | Msa0815530:CDS |
TAATCTCCAATTCAATCTTA+TGG | 0.341534 | 5_3:+49154951 | None:intergenic |
ATTATTACCTGGGAATGATA+TGG | 0.349131 | 5_3:-49153024 | Msa0815530:CDS |
CATGTATGGCAGGGTTTGAT+TGG | 0.351987 | 5_3:-49155129 | Msa0815530:intron |
TCTTCTACAAAATTCTCATT+GGG | 0.352827 | 5_3:+49150210 | None:intergenic |
TTGGATCTTCTTCTTCCCTT+AGG | 0.354538 | 5_3:-49155480 | Msa0815530:intron |
ATCTTCTACAAAATTCTCAT+TGG | 0.355837 | 5_3:+49150209 | None:intergenic |
TGAAACCACTCCTAGCTTGC+AGG | 0.368248 | 5_3:-49152775 | Msa0815530:intron |
GGCTTGTTCACCTCACAATA+TGG | 0.378892 | 5_3:-49152211 | Msa0815530:CDS |
GTCCAGTTATTTACAAGCCT+TGG | 0.389203 | 5_3:-49151162 | Msa0815530:CDS |
CAGATCATACAACATATATA+TGG | 0.390876 | 5_3:-49155059 | Msa0815530:exon |
TCAAAAGAGGTTTGGTTTGT+TGG | 0.393311 | 5_3:-49149751 | Msa0815530:CDS |
GTACAAGGGATCATGGAAAT+TGG | 0.411975 | 5_3:-49152161 | Msa0815530:CDS |
GGAATGAGTCAAAAGAGGTT+TGG | 0.411979 | 5_3:-49149759 | Msa0815530:CDS |
ATCTTTCTTCATGAAGTTCA+AGG | 0.415168 | 5_3:-49149965 | Msa0815530:CDS |
CTCTCAATATCAATGGTACA+AGG | 0.420641 | 5_3:-49152176 | Msa0815530:CDS |
AGGCCTATGTGATGGGGAAA+TGG | 0.422475 | 5_3:-49149945 | Msa0815530:CDS |
CAATGGCCATAAGATTGAAT+TGG | 0.422501 | 5_3:-49154957 | Msa0815530:CDS |
CCAGGGAAATCATTATTACC+TGG | 0.422516 | 5_3:-49153035 | Msa0815530:intron |
GTAGAGAATTTGAGATGGAT+TGG | 0.422814 | 5_3:-49150960 | Msa0815530:CDS |
AATTGCAAATGATATCTTGC+AGG | 0.423405 | 5_3:-49151228 | Msa0815530:CDS |
AAATTATTTGATGCAAATGA+AGG | 0.423887 | 5_3:-49152232 | Msa0815530:CDS |
TGGGATATGTTGACAAAACT+TGG | 0.424746 | 5_3:-49151052 | Msa0815530:CDS |
CATTGTGTTCCCTTGATGTT+TGG | 0.427811 | 5_3:+49150715 | None:intergenic |
ATTTCTTTAGCCCTCGTGAT+AGG | 0.430194 | 5_3:-49152995 | Msa0815530:CDS |
AAACCTGGAGGCAATGAAAC+AGG | 0.435510 | 5_3:+49155034 | None:intergenic |
CCATGGCTCTCGTACAAATT+GGG | 0.441564 | 5_3:-49152832 | Msa0815530:CDS |
AGATGCAAAGATGATGATAA+TGG | 0.441835 | 5_3:-49149998 | Msa0815530:CDS |
CTCTTCCTCGATAGTAAACT+AGG | 0.442628 | 5_3:+49152859 | None:intergenic |
ATCAATGGTACAAGGGATCA+TGG | 0.445299 | 5_3:-49152168 | Msa0815530:CDS |
AGTGTGGTCTTGAAGGAAAT+AGG | 0.448391 | 5_3:-49149706 | Msa0815530:CDS |
GCAGTTGGAAGACTAAATAA+AGG | 0.453939 | 5_3:+49152117 | None:intergenic |
CGCTTGTTATCTGGTTTGCA+TGG | 0.455006 | 5_3:+49152313 | None:intergenic |
CTTGGATGGAGGGTATGTTA+TGG | 0.457226 | 5_3:+49152071 | None:intergenic |
AGGATTAAGTGTGGTCTTGA+AGG | 0.457233 | 5_3:-49149713 | Msa0815530:CDS |
AAAGGTTAGTCATAGAATGT+TGG | 0.457270 | 5_3:-49150133 | Msa0815530:CDS |
GTTTACTATGCCTCCATTGG+AGG | 0.458982 | 5_3:-49151303 | Msa0815530:CDS |
TACTATGCCTCCATTGGAGG+TGG | 0.460939 | 5_3:-49151300 | Msa0815530:CDS |
TGATCTGAATATATATACTT+TGG | 0.461399 | 5_3:+49155075 | None:intergenic |
GATTCGTTCTAGATCCATTC+GGG | 0.466518 | 5_3:+49152967 | None:intergenic |
GCACCTGTTTCATTGCCTCC+AGG | 0.468560 | 5_3:-49155037 | Msa0815530:CDS |
GAAGATCCAAATGAAGAAAG+TGG | 0.472056 | 5_3:+49155493 | None:intergenic |
AGAAGGAGAACCTGCAAGCT+AGG | 0.472184 | 5_3:+49152765 | None:intergenic |
AAAGTAAAATCATCTTCATA+AGG | 0.480913 | 5_3:+49151119 | None:intergenic |
TAGGTTTACTATGCCTCCAT+TGG | 0.482015 | 5_3:-49151306 | Msa0815530:CDS |
GTGGAGGAATTTCCTCAAGT+TGG | 0.490438 | 5_3:-49151281 | Msa0815530:CDS |
CGATTCGTTCTAGATCCATT+CGG | 0.490510 | 5_3:+49152966 | None:intergenic |
AACACAAGATCTATAGAGAT+AGG | 0.493319 | 5_3:-49151020 | Msa0815530:CDS |
TCTGGATATTGGAAGGCGAC+TGG | 0.497382 | 5_3:-49152933 | Msa0815530:CDS |
CCCAATTTGTACGAGAGCCA+TGG | 0.500594 | 5_3:+49152832 | None:intergenic |
TCACTTAATCATGCTTCTCA+GGG | 0.500637 | 5_3:-49151197 | Msa0815530:CDS |
ATAGATCAACCCTTGGTGAT+TGG | 0.500862 | 5_3:+49152289 | None:intergenic |
AAGTTCAAGGCCTATGTGAT+GGG | 0.501395 | 5_3:-49149952 | Msa0815530:CDS |
TCCTCAATGATCTCAAAGCT+TGG | 0.501853 | 5_3:+49150159 | None:intergenic |
GATGCATCGTGTTTATTTGG+AGG | 0.502081 | 5_3:-49149860 | Msa0815530:CDS |
ATGATATCAGTGAATTCTCA+TGG | 0.503256 | 5_3:-49150254 | Msa0815530:CDS |
ATGAATATCGTCTTGATGAG+AGG | 0.503672 | 5_3:-49152803 | Msa0815530:CDS |
AGCATGAAATATCCTCCATT+GGG | 0.507467 | 5_3:+49150739 | None:intergenic |
TTGATCTATACTCTCAAAGA+AGG | 0.508442 | 5_3:-49152275 | Msa0815530:CDS |
CCAATTTGTACGAGAGCCAT+GGG | 0.509568 | 5_3:+49152833 | None:intergenic |
CATGAATGATATGAGCTCCA+TGG | 0.513072 | 5_3:-49151072 | Msa0815530:CDS |
AATCACATGAGAGAGTCAAA+TGG | 0.514617 | 5_3:-49149780 | Msa0815530:CDS |
TAGCATGAAATATCCTCCAT+TGG | 0.516471 | 5_3:+49150738 | None:intergenic |
TGTGAACCGTGGGACTTGCC+AGG | 0.519080 | 5_3:-49154905 | Msa0815530:intron |
GAGACTTCTCTCAATATCAA+TGG | 0.521212 | 5_3:-49152183 | Msa0815530:CDS |
AATTCTCAAGCTCGAGCAGT+AGG | 0.521751 | 5_3:-49152894 | Msa0815530:CDS |
GGAAATTCCTCCACCTCCAA+TGG | 0.528982 | 5_3:+49151290 | None:intergenic |
TTTCATGCTACCAAACATCA+AGG | 0.530340 | 5_3:-49150725 | Msa0815530:CDS |
TATCTAAATAGGAAGATCAA+TGG | 0.533113 | 5_3:-49154974 | Msa0815530:CDS |
CAGGGAAATCATTATTACCT+GGG | 0.538350 | 5_3:-49153034 | Msa0815530:CDS |
CTGGATATTGGAAGGCGACT+GGG | 0.542833 | 5_3:-49152932 | Msa0815530:CDS |
TTAGTAAACGAAGAAGCAGT+TGG | 0.543429 | 5_3:+49152102 | None:intergenic |
AAGATGATGATAATGGAGAA+TGG | 0.544768 | 5_3:-49149991 | Msa0815530:CDS |
ATGAATGATATGAGCTCCAT+GGG | 0.545336 | 5_3:-49151071 | Msa0815530:CDS |
TATGCCTCCATTGGAGGTGG+AGG | 0.545899 | 5_3:-49151297 | Msa0815530:CDS |
GAAGTTCAAGGCCTATGTGA+TGG | 0.547907 | 5_3:-49149953 | Msa0815530:CDS |
TCATGGGGATTCATCAATGA+TGG | 0.548361 | 5_3:-49150237 | Msa0815530:CDS |
GCAACAAGTTCTTCATCGGT+AGG | 0.553122 | 5_3:+49155001 | None:intergenic |
TGATATCAGTGAATTCTCAT+GGG | 0.554636 | 5_3:-49150253 | Msa0815530:CDS |
CAAATTCTCTACCATCCGCT+TGG | 0.560463 | 5_3:+49150971 | None:intergenic |
TCCAAGCTTTGAGATCATTG+AGG | 0.563456 | 5_3:-49150160 | Msa0815530:CDS |
TGAGAGTATAGATCAACCCT+TGG | 0.564710 | 5_3:+49152282 | None:intergenic |
CAACAAGTTCTTCATCGGTA+GGG | 0.565095 | 5_3:+49155002 | None:intergenic |
CTGTACTCTTCTTGATCACA+CGG | 0.568059 | 5_3:+49152379 | None:intergenic |
CAAATGGAATGAGTCAAAAG+AGG | 0.568226 | 5_3:-49149764 | Msa0815530:CDS |
TACCACTCCATATCATTCCC+AGG | 0.569597 | 5_3:+49153017 | None:intergenic |
TGATCTATACTCTCAAAGAA+GGG | 0.569599 | 5_3:-49152274 | Msa0815530:CDS |
GTAGGGTGGAACCTGAAACC+TGG | 0.570488 | 5_3:+49155019 | None:intergenic |
ATTCTCAAGCTCGAGCAGTA+GGG | 0.570616 | 5_3:-49152893 | Msa0815530:CDS |
AGCACAAAATGTTGTCCCAA+TGG | 0.571545 | 5_3:-49150754 | Msa0815530:CDS |
GTTCCATTTCCCCATCACAT+AGG | 0.572384 | 5_3:+49149942 | None:intergenic |
AGTGTGCAAGGATGCAACAT+AGG | 0.574842 | 5_3:-49151325 | Msa0815530:CDS |
AGCTTGGAGAATTTGAGTAA+TGG | 0.575389 | 5_3:+49150175 | None:intergenic |
TGAATTTGAAGTGTTTGTGA+AGG | 0.576360 | 5_3:+49150066 | None:intergenic |
TTCTCAAGCTCGAGCAGTAG+GGG | 0.579595 | 5_3:-49152892 | Msa0815530:CDS |
TGAATATCGTCTTGATGAGA+GGG | 0.582090 | 5_3:-49152802 | Msa0815530:CDS |
CTTCCTTGTTGTGTCACATG+AGG | 0.585636 | 5_3:+49151254 | None:intergenic |
AGGGAACACAATGGCATGCA+AGG | 0.586165 | 5_3:-49150705 | Msa0815530:intron |
ATAAGCAACAAGTTCTTCAT+CGG | 0.586239 | 5_3:+49154997 | None:intergenic |
TATAGAGATAGGTGATCTAG+AGG | 0.589067 | 5_3:-49151009 | Msa0815530:CDS |
AAGATCCAAATGAAGAAAGT+GGG | 0.589466 | 5_3:+49155494 | None:intergenic |
TCTCTATAAGTGTGAACCGT+GGG | 0.592650 | 5_3:-49154915 | Msa0815530:CDS |
GTTGGTGTAAAATGTGAGAG+AGG | 0.593869 | 5_3:-49149733 | Msa0815530:CDS |
ATTGCAAATGATATCTTGCA+GGG | 0.597558 | 5_3:-49151227 | Msa0815530:CDS |
TTCGGGTACTTCCTATCACG+AGG | 0.598759 | 5_3:+49152984 | None:intergenic |
AAATTACCTGGCAAGTCCCA+CGG | 0.604372 | 5_3:+49154899 | None:intergenic |
TCTAGAGGATCAAGAGTCAA+AGG | 0.606182 | 5_3:-49150994 | Msa0815530:CDS |
CAAGTTCTTCATCGGTAGGG+TGG | 0.606394 | 5_3:+49155005 | None:intergenic |
AACCAAATCTGGATATTGGA+AGG | 0.607127 | 5_3:-49152940 | Msa0815530:CDS |
TCTTCCTCGATAGTAAACTA+GGG | 0.609563 | 5_3:+49152860 | None:intergenic |
GGGATATGTTGACAAAACTT+GGG | 0.610464 | 5_3:-49151051 | Msa0815530:CDS |
AGAGTCAAAGGCCAAGCGGA+TGG | 0.610665 | 5_3:-49150982 | Msa0815530:CDS |
GTCTCATTTACCATATTGTG+AGG | 0.612804 | 5_3:+49152201 | None:intergenic |
AACTTGGTGAAATAATGTCA+TGG | 0.614916 | 5_3:+49150092 | None:intergenic |
CATAACATACCCTCCATCCA+AGG | 0.617588 | 5_3:-49152070 | Msa0815530:intron |
ACAAAATGTTGTCCCAATGG+AGG | 0.618611 | 5_3:-49150751 | Msa0815530:CDS |
ACATGAGGTATTCCAACTTG+AGG | 0.622240 | 5_3:+49151269 | None:intergenic |
CTTCTACAAAATTCTCATTG+GGG | 0.623221 | 5_3:+49150211 | None:intergenic |
GGATGGTAGAGAATTTGAGA+TGG | 0.631431 | 5_3:-49150965 | Msa0815530:CDS |
CGTGATAGGAAGTACCCGAA+TGG | 0.632326 | 5_3:-49152981 | Msa0815530:CDS |
AATTCCTCCACCTCCAATGG+AGG | 0.633153 | 5_3:+49151293 | None:intergenic |
AAAACCCTAGTTTACTATCG+AGG | 0.634321 | 5_3:-49152864 | Msa0815530:CDS |
GATCTATACTCTCAAAGAAG+GGG | 0.637182 | 5_3:-49152273 | Msa0815530:CDS |
TGTACCACATGGGCTAGCCA+TGG | 0.637402 | 5_3:-49149655 | Msa0815530:CDS |
TCTCAATATCAATGGTACAA+GGG | 0.642708 | 5_3:-49152175 | Msa0815530:CDS |
TTCATGCTACCAAACATCAA+GGG | 0.649844 | 5_3:-49150724 | Msa0815530:CDS |
ATACCTCATGTGACACAACA+AGG | 0.650067 | 5_3:-49151257 | Msa0815530:CDS |
AGAAGATCAAGGGTTAGCCA+TGG | 0.651875 | 5_3:+49149638 | None:intergenic |
TACCTGGGAATGATATGGAG+TGG | 0.652400 | 5_3:-49153019 | Msa0815530:CDS |
GAGAACCTGCAAGCTAGGAG+TGG | 0.654041 | 5_3:+49152770 | None:intergenic |
TTTGGCGCTTTGTACCACAT+GGG | 0.659507 | 5_3:-49149665 | Msa0815530:CDS |
ATATTGGAAGGCGACTGGGA+AGG | 0.662960 | 5_3:-49152928 | Msa0815530:CDS |
ATCTCTATAAGTGTGAACCG+TGG | 0.665137 | 5_3:-49154916 | Msa0815530:CDS |
ATGTGAGAGAGGATTAAGTG+TGG | 0.666354 | 5_3:-49149722 | Msa0815530:CDS |
ATATTGCACTAGAGTGTGCA+AGG | 0.673783 | 5_3:-49151337 | Msa0815530:CDS |
ATGATGATAATGGAGAATGG+AGG | 0.674089 | 5_3:-49149988 | Msa0815530:CDS |
AACAAGCGACCAATCACCAA+GGG | 0.674840 | 5_3:-49152298 | Msa0815530:CDS |
ATCAAGAGTCAAAGGCCAAG+CGG | 0.676267 | 5_3:-49150986 | Msa0815530:CDS |
GATATCAGTGAATTCTCATG+GGG | 0.677165 | 5_3:-49150252 | Msa0815530:CDS |
TATCGAGGAAGAGCACCCCA+TGG | 0.678830 | 5_3:-49152849 | Msa0815530:CDS |
AATAATTGGAAGGAAGAAGG+AGG | 0.678888 | 5_3:-49155099 | Msa0815530:five_prime_UTR |
TTAGCCATGGCTAGCCCATG+TGG | 0.679756 | 5_3:+49149651 | None:intergenic |
GTGTTTGTGAAGGAACAACT+TGG | 0.687378 | 5_3:+49150076 | None:intergenic |
AGTTCAAGGCCTATGTGATG+GGG | 0.690612 | 5_3:-49149951 | Msa0815530:CDS |
CAAACATCAAGGGAACACAA+TGG | 0.716596 | 5_3:-49150714 | Msa0815530:CDS |
TCGGGTACTTCCTATCACGA+GGG | 0.722170 | 5_3:+49152985 | None:intergenic |
TAACAAGCGACCAATCACCA+AGG | 0.729705 | 5_3:-49152299 | Msa0815530:CDS |
GGGTGGAACCTGAAACCTGG+AGG | 0.736395 | 5_3:+49155022 | None:intergenic |
CAATTTGTACGAGAGCCATG+GGG | 0.773296 | 5_3:+49152834 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATATAAAAATTAAATTTA+AGG | + | chr5_3:49150483-49150502 | None:intergenic | 0.0% |
!! | ATATATATATATATATATAT+AGG | - | chr5_3:49151134-49151153 | Msa0815530:CDS | 0.0% |
!! | TATATATATATATATATATA+GGG | - | chr5_3:49151133-49151152 | Msa0815530:CDS | 0.0% |
!! | ATATATATATATATATATAT+GGG | + | chr5_3:49151134-49151153 | None:intergenic | 0.0% |
!! | TATATATATATATATATATA+TGG | + | chr5_3:49151133-49151152 | None:intergenic | 0.0% |
!!! | AAATTTTATATAAAAAAAAA+AGG | + | chr5_3:49153563-49153582 | None:intergenic | 0.0% |
!! | TAAAAATTAAATTTAAGGAT+GGG | + | chr5_3:49150478-49150497 | None:intergenic | 10.0% |
!! | ATAAAAATTAAATTTAAGGA+TGG | + | chr5_3:49150479-49150498 | None:intergenic | 10.0% |
!! | TATATAATTCATATTATAGA+AGG | - | chr5_3:49150738-49150757 | Msa0815530:CDS | 10.0% |
!! | CAAAAAAAAAAAAAAAACAA+AGG | + | chr5_3:49151629-49151648 | None:intergenic | 10.0% |
!!! | TTGTTTTTTTTTTTTTTTTG+AGG | - | chr5_3:49151629-49151648 | Msa0815530:intron | 10.0% |
!!! | TGTTTTTTTTTTTTTTTTGA+GGG | - | chr5_3:49151630-49151649 | Msa0815530:intron | 10.0% |
!! | AAAATAATTAATGCAAAATA+CGG | - | chr5_3:49151911-49151930 | Msa0815530:intron | 10.0% |
!! | TATTATTACAAAAACTTAAT+AGG | + | chr5_3:49152042-49152061 | None:intergenic | 10.0% |
!!! | TTAAGATCAATATTTTTATA+TGG | - | chr5_3:49154358-49154377 | Msa0815530:intron | 10.0% |
!! | TATATAGTAATATGAAGATT+GGG | + | chr5_3:49149728-49149747 | None:intergenic | 15.0% |
!! | ATATATAGTAATATGAAGAT+TGG | + | chr5_3:49149729-49149748 | None:intergenic | 15.0% |
!!! | CTCTTTATTTCAAATTTTTA+TGG | - | chr5_3:49149899-49149918 | Msa0815530:CDS | 15.0% |
!!! | AAAATAACCATATGTTTTTT+CGG | + | chr5_3:49150006-49150025 | None:intergenic | 15.0% |
!! | TGATTGGTATAAAAAATAAT+TGG | - | chr5_3:49150051-49150070 | Msa0815530:CDS | 15.0% |
!!! | AACTAAATAAATTTGGTAAT+TGG | + | chr5_3:49150506-49150525 | None:intergenic | 15.0% |
!! | ATTAATATGAATTATAGCAA+AGG | + | chr5_3:49150694-49150713 | None:intergenic | 15.0% |
!! | TAACGATCTAATTTATTAAT+TGG | + | chr5_3:49151022-49151041 | None:intergenic | 15.0% |
!!! | GTTTTTTTTTTTTTTTTGAG+GGG | - | chr5_3:49151631-49151650 | Msa0815530:intron | 15.0% |
!!! | TTTTTTTTTTTTTTTTGAGG+GGG | - | chr5_3:49151632-49151651 | Msa0815530:intron | 15.0% |
!!! | GTATTTTGCATTAATTATTT+TGG | + | chr5_3:49151912-49151931 | None:intergenic | 15.0% |
!! | AAATAATTAATGCAAAATAC+GGG | - | chr5_3:49151912-49151931 | Msa0815530:intron | 15.0% |
!! | AAGCGAAAAAAATATTAAAA+TGG | + | chr5_3:49152450-49152469 | None:intergenic | 15.0% |
!! | TATTGGTATAATATTATGTA+TGG | + | chr5_3:49152524-49152543 | None:intergenic | 15.0% |
!!! | TAATTAGAGTAATTTCATTT+TGG | - | chr5_3:49152562-49152581 | Msa0815530:intron | 15.0% |
!!! | TAAAAAAAAAGTGTAACATT+AGG | + | chr5_3:49152642-49152661 | None:intergenic | 15.0% |
!! | TTAAAAACACAAAAATGTAT+GGG | + | chr5_3:49154499-49154518 | None:intergenic | 15.0% |
!!! | TTGATGTATTTGATTTATAA+TGG | + | chr5_3:49154599-49154618 | None:intergenic | 15.0% |
!!! | AGAAAAGATTTAAAATTCAA+AGG | + | chr5_3:49154810-49154829 | None:intergenic | 15.0% |
!!! | ATTTTAAATCTTTTCTTTTC+CGG | - | chr5_3:49154814-49154833 | Msa0815530:intron | 15.0% |
!!! | ATATTTTTAACACTTAGCTA+CGG | + | chr5_3:49149833-49149852 | None:intergenic | 20.0% |
!!! | GAAAAAACATATGGTTATTT+TGG | - | chr5_3:49150005-49150024 | Msa0815530:CDS | 20.0% |
!! | TGGTATAAAAAATAATTGGA+AGG | - | chr5_3:49150055-49150074 | Msa0815530:CDS | 20.0% |
!! | TGATCTGAATATATATACTT+TGG | + | chr5_3:49150092-49150111 | None:intergenic | 20.0% |
!!! | TTGTTGCTTATTATCTAAAT+AGG | - | chr5_3:49150179-49150198 | Msa0815530:CDS | 20.0% |
!! | TTCATGCATGATATAAAAAT+AGG | + | chr5_3:49150296-49150315 | None:intergenic | 20.0% |
!! | GCTCTATAACTAAATAAATT+TGG | + | chr5_3:49150513-49150532 | None:intergenic | 20.0% |
!! | GCTATAATTCATATTAATGA+AGG | - | chr5_3:49150696-49150715 | Msa0815530:intron | 20.0% |
!!! | CTACAATCTATTTTGATTAT+AGG | - | chr5_3:49150894-49150913 | Msa0815530:intron | 20.0% |
!! | CTTTCAAATAAACTTTCATT+GGG | + | chr5_3:49151080-49151099 | None:intergenic | 20.0% |
!! | ACTTTCAAATAAACTTTCAT+TGG | + | chr5_3:49151081-49151100 | None:intergenic | 20.0% |
!! | AATGAAAGTTTATTTGAAAG+TGG | - | chr5_3:49151080-49151099 | Msa0815530:CDS | 20.0% |
!! | GCAAATAAATAACTAAAAAG+TGG | + | chr5_3:49151267-49151286 | None:intergenic | 20.0% |
!! | GCAAGTAAATAACTAAAAAA+TGG | + | chr5_3:49151416-49151435 | None:intergenic | 20.0% |
!! | AAATATCTCATGTGATATAA+CGG | - | chr5_3:49151694-49151713 | Msa0815530:intron | 20.0% |
!! | ATAATCTTTATTACCACATT+AGG | + | chr5_3:49151767-49151786 | None:intergenic | 20.0% |
!! | ACTTTATATCCTAACTAATT+TGG | - | chr5_3:49151861-49151880 | Msa0815530:intron | 20.0% |
!! | AATAATTAATGCAAAATACG+GGG | - | chr5_3:49151913-49151932 | Msa0815530:intron | 20.0% |
!! | AGACAAAAAAAACTTCAAAT+TGG | + | chr5_3:49152099-49152118 | None:intergenic | 20.0% |
!!! | GATTAGATTTCTATTTTGTT+TGG | + | chr5_3:49152614-49152633 | None:intergenic | 20.0% |
!! | AAATTATTTGATGCAAATGA+AGG | - | chr5_3:49152932-49152951 | Msa0815530:CDS | 20.0% |
!! | AAAAAAAACAATCATCCAAT+TGG | - | chr5_3:49153757-49153776 | Msa0815530:intron | 20.0% |
!! | AAAAAAACAATCATCCAATT+GGG | - | chr5_3:49153758-49153777 | Msa0815530:intron | 20.0% |
!! | AATTCAAGTAATATATGCAA+TGG | + | chr5_3:49153793-49153812 | None:intergenic | 20.0% |
!!! | ATTACTTGAATTTATTTTGC+AGG | - | chr5_3:49153801-49153820 | Msa0815530:intron | 20.0% |
!! | AAAGTAAAATCATCTTCATA+AGG | + | chr5_3:49154048-49154067 | None:intergenic | 20.0% |
!!! | AGTATTTTTATTTTTTTCGG+TGG | - | chr5_3:49154259-49154278 | Msa0815530:intron | 20.0% |
!!! | AATTTTCCAATTTGTATAGA+TGG | - | chr5_3:49154386-49154405 | Msa0815530:intron | 20.0% |
!! | GTTAAAAACACAAAAATGTA+TGG | + | chr5_3:49154500-49154519 | None:intergenic | 20.0% |
!!! | TCTTTCTGATCATTTTTATA+AGG | - | chr5_3:49154537-49154556 | Msa0815530:intron | 20.0% |
!!! | CTTTCTGATCATTTTTATAA+GGG | - | chr5_3:49154538-49154557 | Msa0815530:intron | 20.0% |
!! | AGTAATAGTACTCTATTAAA+TGG | + | chr5_3:49154764-49154783 | None:intergenic | 20.0% |
!! | TACTATTACTTTATTGATCA+TGG | - | chr5_3:49154774-49154793 | Msa0815530:intron | 20.0% |
!! | ATTTTGGATGATTTCATGTA+TGG | - | chr5_3:49150021-49150040 | Msa0815530:CDS | 25.0% |
! | AAAAATAATTGGAAGGAAGA+AGG | - | chr5_3:49150062-49150081 | Msa0815530:CDS | 25.0% |
! | CAGATCATACAACATATATA+TGG | - | chr5_3:49150105-49150124 | Msa0815530:CDS | 25.0% |
! | TATCTAAATAGGAAGATCAA+TGG | - | chr5_3:49150190-49150209 | Msa0815530:CDS | 25.0% |
! | TAATCTCCAATTCAATCTTA+TGG | + | chr5_3:49150216-49150235 | None:intergenic | 25.0% |
!!! | CAATCTATTTTGATTATAGG+AGG | - | chr5_3:49150897-49150916 | Msa0815530:intron | 25.0% |
!!! | CATACAGTACAAGAATTTTT+TGG | + | chr5_3:49150927-49150946 | None:intergenic | 25.0% |
!!! | ACTTCATATGCTTACTTTTT+TGG | - | chr5_3:49151591-49151610 | Msa0815530:intron | 25.0% |
! | TTATATCCTAACTAATTTGG+CGG | - | chr5_3:49151864-49151883 | Msa0815530:intron | 25.0% |
!! | TTTTGTCTTCTTATAATTCC+AGG | - | chr5_3:49152111-49152130 | Msa0815530:CDS | 25.0% |
! | TTTGTCTTCTTATAATTCCA+GGG | - | chr5_3:49152112-49152131 | Msa0815530:CDS | 25.0% |
! | AAAAGTGAGAAAAAGAAAGA+AGG | + | chr5_3:49152419-49152438 | None:intergenic | 25.0% |
! | ATGGAATTTGATTCAAAACT+CGG | + | chr5_3:49152505-49152524 | None:intergenic | 25.0% |
!!! | CATTTTAGCTAGAAGAATAT+TGG | + | chr5_3:49152541-49152560 | None:intergenic | 25.0% |
! | ACACATCAAAATGTAGAAAT+TGG | + | chr5_3:49152713-49152732 | None:intergenic | 25.0% |
! | TCAAATTAAATTTGTGTGCA+TGG | + | chr5_3:49153134-49153153 | None:intergenic | 25.0% |
!!! | TTACTTTTACCAACTTACAT+AGG | - | chr5_3:49153476-49153495 | Msa0815530:intron | 25.0% |
!! | TACTTTTACCAACTTACATA+GGG | - | chr5_3:49153477-49153496 | Msa0815530:intron | 25.0% |
!! | AAATTAGACTTTTTGAACCT+TGG | - | chr5_3:49153708-49153727 | Msa0815530:intron | 25.0% |
!!! | ATATTTTAGTGTCTAAGCTT+GGG | + | chr5_3:49153736-49153755 | None:intergenic | 25.0% |
!! | ATAATTTTCATTGTCATCCA+AGG | + | chr5_3:49154022-49154041 | None:intergenic | 25.0% |
!! | TGAAGATGATTTTACTTTCA+TGG | - | chr5_3:49154050-49154069 | Msa0815530:intron | 25.0% |
!!! | AATGAGTAATATATCGACTT+TGG | - | chr5_3:49154716-49154735 | Msa0815530:intron | 25.0% |
!! | GTAAAAACCATCATTTTGTT+AGG | + | chr5_3:49154842-49154861 | None:intergenic | 25.0% |
!!! | TATCATTGTCATTTTGTTCA+AGG | + | chr5_3:49154896-49154915 | None:intergenic | 25.0% |
! | TCTTCTACAAAATTCTCATT+GGG | + | chr5_3:49154957-49154976 | None:intergenic | 25.0% |
! | ATCTTCTACAAAATTCTCAT+TGG | + | chr5_3:49154958-49154977 | None:intergenic | 25.0% |
!! | AATGAGAATTTTGTAGAAGA+TGG | - | chr5_3:49154957-49154976 | Msa0815530:CDS | 25.0% |
!! | TTTTGTAGAAGATGGTAAAA+TGG | - | chr5_3:49154965-49154984 | Msa0815530:CDS | 25.0% |
!! | TCTATAGAGTGTTTATTGTT+TGG | + | chr5_3:49155140-49155159 | None:intergenic | 25.0% |
!!! | AACTTGCTATTTTCTTTGAT+GGG | + | chr5_3:49155256-49155275 | None:intergenic | 25.0% |
!!! | AAACTTGCTATTTTCTTTGA+TGG | + | chr5_3:49155257-49155276 | None:intergenic | 25.0% |
! | ATCAAAGAAAATAGCAAGTT+TGG | - | chr5_3:49155256-49155275 | Msa0815530:intron | 25.0% |
!!! | TCTTTCATCTTTTTTGGTTT+TGG | + | chr5_3:49155350-49155369 | None:intergenic | 25.0% |
!! | CTTTTCTCTTTCATCTTTTT+TGG | + | chr5_3:49155356-49155375 | None:intergenic | 25.0% |
!! | CATTTTCTTCACCATATTTT+TGG | - | chr5_3:49155481-49155500 | Msa0815530:five_prime_UTR | 25.0% |
AAGATCCAAATGAAGAAAGT+GGG | + | chr5_3:49149673-49149692 | None:intergenic | 30.0% | |
!! | CATGTTTCTATTTTCATCTC+TGG | + | chr5_3:49149799-49149818 | None:intergenic | 30.0% |
TTTGCAACCGAAAAAACATA+TGG | - | chr5_3:49149996-49150015 | Msa0815530:CDS | 30.0% | |
ATAAGCAACAAGTTCTTCAT+CGG | + | chr5_3:49150170-49150189 | None:intergenic | 30.0% | |
AAATAGGTTCTCAAATTACC+TGG | + | chr5_3:49150280-49150299 | None:intergenic | 30.0% | |
! | CGTGTTCAGTTTACAAATTT+TGG | - | chr5_3:49150328-49150347 | Msa0815530:intron | 30.0% |
! | ATGATTTTGTAGACCTTAAC+AGG | - | chr5_3:49151052-49151071 | Msa0815530:CDS | 30.0% |
! | TGATTTTGTAGACCTTAACA+GGG | - | chr5_3:49151053-49151072 | Msa0815530:CDS | 30.0% |
! | ACACCCACTAATTTTTATGT+GGG | - | chr5_3:49151204-49151223 | Msa0815530:CDS | 30.0% |
ACTCCCACATAAAAATTAGT+GGG | + | chr5_3:49151210-49151229 | None:intergenic | 30.0% | |
ACCTTCTAACAATAACAAGT+GGG | + | chr5_3:49151358-49151377 | None:intergenic | 30.0% | |
TTATAGCAACATACACCTTA+GGG | - | chr5_3:49151381-49151400 | Msa0815530:intron | 30.0% | |
AAATGGTTAAATACACCCTA+AGG | + | chr5_3:49151399-49151418 | None:intergenic | 30.0% | |
!!! | TTTTTTTTTTTTTGAGGGGG+TGG | - | chr5_3:49151635-49151654 | Msa0815530:intron | 30.0% |
!!! | TAGTTTACGCTTTTTGACTT+GGG | + | chr5_3:49151809-49151828 | None:intergenic | 30.0% |
!! | TTAGTTTACGCTTTTTGACT+TGG | + | chr5_3:49151810-49151829 | None:intergenic | 30.0% |
TATATCCTAACTAATTTGGC+GGG | - | chr5_3:49151865-49151884 | Msa0815530:intron | 30.0% | |
ATTATTACCTGGGAATGATA+TGG | - | chr5_3:49152140-49152159 | Msa0815530:CDS | 30.0% | |
AATTTGATTCAAAACTCGGT+TGG | + | chr5_3:49152501-49152520 | None:intergenic | 30.0% | |
! | AAAAGTGTAACATTAGGCTA+GGG | + | chr5_3:49152636-49152655 | None:intergenic | 30.0% |
! | AAAAAGTGTAACATTAGGCT+AGG | + | chr5_3:49152637-49152656 | None:intergenic | 30.0% |
TTGATCTATACTCTCAAAGA+AGG | - | chr5_3:49152889-49152908 | Msa0815530:CDS | 30.0% | |
TGATCTATACTCTCAAAGAA+GGG | - | chr5_3:49152890-49152909 | Msa0815530:CDS | 30.0% | |
TCTCAATATCAATGGTACAA+GGG | - | chr5_3:49152989-49153008 | Msa0815530:CDS | 30.0% | |
GCTTCTTCGTTTACTAATTA+TGG | - | chr5_3:49153068-49153087 | Msa0815530:intron | 30.0% | |
TGTATAGCTTCTTGAAATTG+CGG | - | chr5_3:49153238-49153257 | Msa0815530:intron | 30.0% | |
ACTTCTCTTAAGCATTTGTT+TGG | + | chr5_3:49153308-49153327 | None:intergenic | 30.0% | |
! | AAGTGTGAAATTGTGTGTTT+TGG | + | chr5_3:49153362-49153381 | None:intergenic | 30.0% |
! | TAATATCTAGAGTTGAACCT+AGG | - | chr5_3:49153431-49153450 | Msa0815530:intron | 30.0% |
TGATCTCACTATCTTATCTT+AGG | + | chr5_3:49153646-49153665 | None:intergenic | 30.0% | |
AGATAAGATAGTGAGATCAA+AGG | - | chr5_3:49153647-49153666 | Msa0815530:intron | 30.0% | |
GATAAGATAGTGAGATCAAA+GGG | - | chr5_3:49153648-49153667 | Msa0815530:intron | 30.0% | |
!!! | TATTTTAGTGTCTAAGCTTG+GGG | + | chr5_3:49153735-49153754 | None:intergenic | 30.0% |
!!! | CATATTTTAGTGTCTAAGCT+TGG | + | chr5_3:49153737-49153756 | None:intergenic | 30.0% |
!!! | ACTTGAATTTATTTTGCAGG+TGG | - | chr5_3:49153804-49153823 | Msa0815530:intron | 30.0% |
AATTGCAAATGATATCTTGC+AGG | - | chr5_3:49153936-49153955 | Msa0815530:intron | 30.0% | |
ATTGCAAATGATATCTTGCA+GGG | - | chr5_3:49153937-49153956 | Msa0815530:intron | 30.0% | |
AACACAAGATCTATAGAGAT+AGG | - | chr5_3:49154144-49154163 | Msa0815530:intron | 30.0% | |
! | ACCTTTTCAAAATCTTCTCT+TGG | + | chr5_3:49154234-49154253 | None:intergenic | 30.0% |
TCAACTTTGTAGAAAAGAAG+AGG | - | chr5_3:49154683-49154702 | Msa0815530:intron | 30.0% | |
TTTGTAGAAAAGAAGAGGAT+CGG | - | chr5_3:49154688-49154707 | Msa0815530:intron | 30.0% | |
!! | AATGGATTGTTGAGACAAAT+TGG | + | chr5_3:49154746-49154765 | None:intergenic | 30.0% |
! | ATTTAAAATTCAAAGGACCG+AGG | + | chr5_3:49154803-49154822 | None:intergenic | 30.0% |
ATGATATCAGTGAATTCTCA+TGG | - | chr5_3:49154910-49154929 | Msa0815530:CDS | 30.0% | |
TGATATCAGTGAATTCTCAT+GGG | - | chr5_3:49154911-49154930 | Msa0815530:CDS | 30.0% | |
CTTCTACAAAATTCTCATTG+GGG | + | chr5_3:49154956-49154975 | None:intergenic | 30.0% | |
TGAGATCATTGAGGAAATAA+AGG | - | chr5_3:49155013-49155032 | Msa0815530:CDS | 30.0% | |
! | AAAGGTTAGTCATAGAATGT+TGG | - | chr5_3:49155031-49155050 | Msa0815530:CDS | 30.0% |
! | AACTTGGTGAAATAATGTCA+TGG | + | chr5_3:49155075-49155094 | None:intergenic | 30.0% |
! | TGAATTTGAAGTGTTTGTGA+AGG | + | chr5_3:49155101-49155120 | None:intergenic | 30.0% |
TGTTTATTGTTTGGCATCAT+TGG | + | chr5_3:49155131-49155150 | None:intergenic | 30.0% | |
AGATGCAAAGATGATGATAA+TGG | - | chr5_3:49155166-49155185 | Msa0815530:intron | 30.0% | |
!! | AAGATGATGATAATGGAGAA+TGG | - | chr5_3:49155173-49155192 | Msa0815530:intron | 30.0% |
ATCTTTCTTCATGAAGTTCA+AGG | - | chr5_3:49155199-49155218 | Msa0815530:intron | 30.0% | |
!!! | TTTTCTTTGATGGGTTGAAT+AGG | + | chr5_3:49155247-49155266 | None:intergenic | 30.0% |
TTTGATGCATCGTGTTTATT+TGG | - | chr5_3:49155301-49155320 | Msa0815530:intron | 30.0% | |
GAAGATCCAAATGAAGAAAG+TGG | + | chr5_3:49149674-49149693 | None:intergenic | 35.0% | |
AGAGAAAGAGAAAGACCTAA+GGG | + | chr5_3:49149702-49149721 | None:intergenic | 35.0% | |
AATAATTGGAAGGAAGAAGG+AGG | - | chr5_3:49150065-49150084 | Msa0815530:CDS | 35.0% | |
CAATGGCCATAAGATTGAAT+TGG | - | chr5_3:49150207-49150226 | Msa0815530:CDS | 35.0% | |
! | CACACCCACTAATTTTTATG+TGG | - | chr5_3:49151203-49151222 | Msa0815530:CDS | 35.0% |
CACTCCCACATAAAAATTAG+TGG | + | chr5_3:49151211-49151230 | None:intergenic | 35.0% | |
! | TTTTAGCAAAGCTACACCTT+AGG | - | chr5_3:49151231-49151250 | Msa0815530:CDS | 35.0% |
TTTAGCAAAGCTACACCTTA+GGG | - | chr5_3:49151232-49151251 | Msa0815530:CDS | 35.0% | |
AAGTGGTTAATTACACCCTA+AGG | + | chr5_3:49151250-49151269 | None:intergenic | 35.0% | |
ACTCCCACATAAAAACTAGT+GGG | - | chr5_3:49151293-49151312 | Msa0815530:CDS | 35.0% | |
!!! | ACACCCACTAGTTTTTATGT+GGG | + | chr5_3:49151299-49151318 | None:intergenic | 35.0% |
TGTGTTCTAGCAAATCCTAT+AGG | + | chr5_3:49151335-49151354 | None:intergenic | 35.0% | |
!! | ACCCACTTGTTATTGTTAGA+AGG | - | chr5_3:49151354-49151373 | Msa0815530:intron | 35.0% |
CACCTTCTAACAATAACAAG+TGG | + | chr5_3:49151359-49151378 | None:intergenic | 35.0% | |
GTTATAGCAACATACACCTT+AGG | - | chr5_3:49151380-49151399 | Msa0815530:intron | 35.0% | |
ACTCCCACATAAAAACTAGT+GGG | - | chr5_3:49151293-49151312 | Msa0815530:CDS | 35.0% | |
!!! | ACACCCACTAGTTTTTATGT+GGG | + | chr5_3:49151299-49151318 | None:intergenic | 35.0% |
! | TCTCATGTGATATAACGGAA+AGG | - | chr5_3:49151699-49151718 | Msa0815530:intron | 35.0% |
! | GATTGTACTTCTAGAGAAGA+TGG | - | chr5_3:49151721-49151740 | Msa0815530:intron | 35.0% |
TTAGGATTCCTAAAGGTGAA+GGG | + | chr5_3:49151749-49151768 | None:intergenic | 35.0% | |
ATTAGGATTCCTAAAGGTGA+AGG | + | chr5_3:49151750-49151769 | None:intergenic | 35.0% | |
TACCACATTAGGATTCCTAA+AGG | + | chr5_3:49151756-49151775 | None:intergenic | 35.0% | |
TGTCAATATTTGCATGAGAG+TGG | + | chr5_3:49151842-49151861 | None:intergenic | 35.0% | |
CAGGGAAATCATTATTACCT+GGG | - | chr5_3:49152130-49152149 | Msa0815530:CDS | 35.0% | |
AACCAAATCTGGATATTGGA+AGG | - | chr5_3:49152224-49152243 | Msa0815530:CDS | 35.0% | |
AAAACCCTAGTTTACTATCG+AGG | - | chr5_3:49152300-49152319 | Msa0815530:CDS | 35.0% | |
TCTTCCTCGATAGTAAACTA+GGG | + | chr5_3:49152307-49152326 | None:intergenic | 35.0% | |
ATGAATATCGTCTTGATGAG+AGG | - | chr5_3:49152361-49152380 | Msa0815530:CDS | 35.0% | |
TGAATATCGTCTTGATGAGA+GGG | - | chr5_3:49152362-49152381 | Msa0815530:CDS | 35.0% | |
TGGAAAATAATCACAACCTC+AGG | - | chr5_3:49152746-49152765 | Msa0815530:intron | 35.0% | |
ACAGTGATTGTGCAAAAAGT+TGG | - | chr5_3:49152804-49152823 | Msa0815530:CDS | 35.0% | |
CAAAAAGTTGGAGGACAATA+TGG | - | chr5_3:49152816-49152835 | Msa0815530:CDS | 35.0% | |
GATCTATACTCTCAAAGAAG+GGG | - | chr5_3:49152891-49152910 | Msa0815530:CDS | 35.0% | |
GTCTCATTTACCATATTGTG+AGG | + | chr5_3:49152966-49152985 | None:intergenic | 35.0% | |
GAGACTTCTCTCAATATCAA+TGG | - | chr5_3:49152981-49153000 | Msa0815530:CDS | 35.0% | |
CTCTCAATATCAATGGTACA+AGG | - | chr5_3:49152988-49153007 | Msa0815530:CDS | 35.0% | |
GCAGTTGGAAGACTAAATAA+AGG | + | chr5_3:49153050-49153069 | None:intergenic | 35.0% | |
TTAGTAAACGAAGAAGCAGT+TGG | + | chr5_3:49153065-49153084 | None:intergenic | 35.0% | |
!! | GTATTTTTGTGTACCTTGGA+TGG | + | chr5_3:49153110-49153129 | None:intergenic | 35.0% |
!! | TGGAGTATTTTTGTGTACCT+TGG | + | chr5_3:49153114-49153133 | None:intergenic | 35.0% |
! | TACGTTTTTGTTCTCACGTT+TGG | - | chr5_3:49153185-49153204 | Msa0815530:intron | 35.0% |
! | TTTTTGTTCTCACGTTTGGT+TGG | - | chr5_3:49153189-49153208 | Msa0815530:intron | 35.0% |
! | TTTTGTTCTCACGTTTGGTT+GGG | - | chr5_3:49153190-49153209 | Msa0815530:intron | 35.0% |
GTATGTTTCCCTATGTAAGT+TGG | + | chr5_3:49153488-49153507 | None:intergenic | 35.0% | |
AATGGTTCAAAAAGCCCAAT+TGG | + | chr5_3:49153775-49153794 | None:intergenic | 35.0% | |
TTCACTTAATCATGCTTCTC+AGG | - | chr5_3:49153966-49153985 | Msa0815530:intron | 35.0% | |
TCACTTAATCATGCTTCTCA+GGG | - | chr5_3:49153967-49153986 | Msa0815530:intron | 35.0% | |
ATCCAAGGCTTGTAAATAAC+TGG | + | chr5_3:49154007-49154026 | None:intergenic | 35.0% | |
ATGAATGATATGAGCTCCAT+GGG | - | chr5_3:49154093-49154112 | Msa0815530:intron | 35.0% | |
!! | AGTTTTGTCAACATATCCCA+TGG | + | chr5_3:49154112-49154131 | None:intergenic | 35.0% |
TGGGATATGTTGACAAAACT+TGG | - | chr5_3:49154112-49154131 | Msa0815530:intron | 35.0% | |
GGGATATGTTGACAAAACTT+GGG | - | chr5_3:49154113-49154132 | Msa0815530:intron | 35.0% | |
TATAGAGATAGGTGATCTAG+AGG | - | chr5_3:49154155-49154174 | Msa0815530:intron | 35.0% | |
! | GTAGAGAATTTGAGATGGAT+TGG | - | chr5_3:49154204-49154223 | Msa0815530:intron | 35.0% |
!! | GCCAAGAGAAGATTTTGAAA+AGG | - | chr5_3:49154230-49154249 | Msa0815530:intron | 35.0% |
GTGCTTCCATCTATACAAAT+TGG | + | chr5_3:49154395-49154414 | None:intergenic | 35.0% | |
AGCATGAAATATCCTCCATT+GGG | + | chr5_3:49154428-49154447 | None:intergenic | 35.0% | |
TAGCATGAAATATCCTCCAT+TGG | + | chr5_3:49154429-49154448 | None:intergenic | 35.0% | |
TTTCATGCTACCAAACATCA+AGG | - | chr5_3:49154439-49154458 | Msa0815530:intron | 35.0% | |
TTCATGCTACCAAACATCAA+GGG | - | chr5_3:49154440-49154459 | Msa0815530:intron | 35.0% | |
TTTATTGATCATGGTGACCT+CGG | - | chr5_3:49154783-49154802 | Msa0815530:intron | 35.0% | |
! | ACCATCATTTTGTTAGGTAC+CGG | + | chr5_3:49154836-49154855 | None:intergenic | 35.0% |
GATATCAGTGAATTCTCATG+GGG | - | chr5_3:49154912-49154931 | Msa0815530:CDS | 35.0% | |
AGCTTGGAGAATTTGAGTAA+TGG | + | chr5_3:49154992-49155011 | None:intergenic | 35.0% | |
!! | ATGATGATAATGGAGAATGG+AGG | - | chr5_3:49155176-49155195 | Msa0815530:intron | 35.0% |
AATCACATGAGAGAGTCAAA+TGG | - | chr5_3:49155384-49155403 | Msa0815530:intron | 35.0% | |
CAAATGGAATGAGTCAAAAG+AGG | - | chr5_3:49155400-49155419 | Msa0815530:intron | 35.0% | |
!! | TCAAAAGAGGTTTGGTTTGT+TGG | - | chr5_3:49155413-49155432 | Msa0815530:intron | 35.0% |
TCTCTCCCACTTTCTTCATT+TGG | - | chr5_3:49149665-49149684 | Msa0815530:CDS | 40.0% | |
TTGGATCTTCTTCTTCCCTT+AGG | - | chr5_3:49149684-49149703 | Msa0815530:CDS | 40.0% | |
GAGAGAAAGAGAAAGACCTA+AGG | + | chr5_3:49149703-49149722 | None:intergenic | 40.0% | |
TGGATGATTTCATGTATGGC+AGG | - | chr5_3:49150025-49150044 | Msa0815530:CDS | 40.0% | |
GGATGATTTCATGTATGGCA+GGG | - | chr5_3:49150026-49150045 | Msa0815530:CDS | 40.0% | |
CAACAAGTTCTTCATCGGTA+GGG | + | chr5_3:49150165-49150184 | None:intergenic | 40.0% | |
ATCTCTATAAGTGTGAACCG+TGG | - | chr5_3:49150248-49150267 | Msa0815530:CDS | 40.0% | |
TCTCTATAAGTGTGAACCGT+GGG | - | chr5_3:49150249-49150268 | Msa0815530:CDS | 40.0% | |
! | AGTAATCCATCGAGTCTTGT+GGG | - | chr5_3:49150623-49150642 | Msa0815530:intron | 40.0% |
CACTCCCACATAAAAACTAG+TGG | - | chr5_3:49151292-49151311 | Msa0815530:CDS | 40.0% | |
!!! | CACACCCACTAGTTTTTATG+TGG | + | chr5_3:49151300-49151319 | None:intergenic | 40.0% |
GTGTTCTAGCAAATGCCTAT+AGG | - | chr5_3:49151317-49151336 | Msa0815530:CDS | 40.0% | |
CACTCCCACATAAAAACTAG+TGG | - | chr5_3:49151292-49151311 | Msa0815530:CDS | 40.0% | |
!!! | CACACCCACTAGTTTTTATG+TGG | + | chr5_3:49151300-49151319 | None:intergenic | 40.0% |
TAGGATTCCTAAAGGTGAAG+GGG | + | chr5_3:49151748-49151767 | None:intergenic | 40.0% | |
! | CACCTTTAGGAATCCTAATG+TGG | - | chr5_3:49151751-49151770 | Msa0815530:intron | 40.0% |
GTTTACCCGCCAAATTAGTT+AGG | + | chr5_3:49151873-49151892 | None:intergenic | 40.0% | |
! | ACTAATTTGGCGGGTAAACA+TGG | - | chr5_3:49151874-49151893 | Msa0815530:intron | 40.0% |
! | CTAATTTGGCGGGTAAACAT+GGG | - | chr5_3:49151875-49151894 | Msa0815530:intron | 40.0% |
CCAGGTAATAATGATTTCCC+TGG | + | chr5_3:49152132-49152151 | None:intergenic | 40.0% | |
CCAGGGAAATCATTATTACC+TGG | - | chr5_3:49152129-49152148 | Msa0815530:CDS | 40.0% | |
ATTTCTTTAGCCCTCGTGAT+AGG | - | chr5_3:49152169-49152188 | Msa0815530:CDS | 40.0% | |
! | GATTCGTTCTAGATCCATTC+GGG | + | chr5_3:49152200-49152219 | None:intergenic | 40.0% |
! | CGATTCGTTCTAGATCCATT+CGG | + | chr5_3:49152201-49152220 | None:intergenic | 40.0% |
GTGCAACCAAATCTGGATAT+TGG | - | chr5_3:49152220-49152239 | Msa0815530:CDS | 40.0% | |
CTCTTCCTCGATAGTAAACT+AGG | + | chr5_3:49152308-49152327 | None:intergenic | 40.0% | |
GGTCAGTTGAAGGATTCTAA+AGG | + | chr5_3:49152480-49152499 | None:intergenic | 40.0% | |
! | GATGTGTCTCTCTTTTTGAC+TGG | - | chr5_3:49152726-49152745 | Msa0815530:intron | 40.0% |
CTGTACTCTTCTTGATCACA+CGG | + | chr5_3:49152788-49152807 | None:intergenic | 40.0% | |
GTGATTGTGCAAAAAGTTGG+AGG | - | chr5_3:49152807-49152826 | Msa0815530:CDS | 40.0% | |
! | ATAGATCAACCCTTGGTGAT+TGG | + | chr5_3:49152878-49152897 | None:intergenic | 40.0% |
! | TGAGAGTATAGATCAACCCT+TGG | + | chr5_3:49152885-49152904 | None:intergenic | 40.0% |
ATCAATGGTACAAGGGATCA+TGG | - | chr5_3:49152996-49153015 | Msa0815530:CDS | 40.0% | |
GTACAAGGGATCATGGAAAT+TGG | - | chr5_3:49153003-49153022 | Msa0815530:CDS | 40.0% | |
! | TTTTGTGTACCTTGGATGGA+GGG | + | chr5_3:49153106-49153125 | None:intergenic | 40.0% |
! | TTTTTGTGTACCTTGGATGG+AGG | + | chr5_3:49153107-49153126 | None:intergenic | 40.0% |
AATTGCGGTGAAAACTGTCT+TGG | - | chr5_3:49153253-49153272 | Msa0815530:intron | 40.0% | |
ATTGCGGTGAAAACTGTCTT+GGG | - | chr5_3:49153254-49153273 | Msa0815530:intron | 40.0% | |
AGTTGAACCTAGGACAAGTT+GGG | - | chr5_3:49153441-49153460 | Msa0815530:intron | 40.0% | |
! | ATGGCCAAAGCTAAGGTTTT+AGG | + | chr5_3:49153591-49153610 | None:intergenic | 40.0% |
!! | AAACCTTAGCTTTGGCCATT+TGG | - | chr5_3:49153592-49153611 | Msa0815530:intron | 40.0% |
ATATTGCACTAGAGTGTGCA+AGG | - | chr5_3:49153827-49153846 | Msa0815530:intron | 40.0% | |
TAGGTTTACTATGCCTCCAT+TGG | - | chr5_3:49153858-49153877 | Msa0815530:intron | 40.0% | |
! | ACATGAGGTATTCCAACTTG+AGG | + | chr5_3:49153898-49153917 | None:intergenic | 40.0% |
ATACCTCATGTGACACAACA+AGG | - | chr5_3:49153907-49153926 | Msa0815530:intron | 40.0% | |
GTCCAGTTATTTACAAGCCT+TGG | - | chr5_3:49154002-49154021 | Msa0815530:intron | 40.0% | |
CATGAATGATATGAGCTCCA+TGG | - | chr5_3:49154092-49154111 | Msa0815530:intron | 40.0% | |
TCTAGAGGATCAAGAGTCAA+AGG | - | chr5_3:49154170-49154189 | Msa0815530:intron | 40.0% | |
GGATGGTAGAGAATTTGAGA+TGG | - | chr5_3:49154199-49154218 | Msa0815530:intron | 40.0% | |
AGCACAAAATGTTGTCCCAA+TGG | - | chr5_3:49154410-49154429 | Msa0815530:intron | 40.0% | |
ACAAAATGTTGTCCCAATGG+AGG | - | chr5_3:49154413-49154432 | Msa0815530:intron | 40.0% | |
CATTGTGTTCCCTTGATGTT+TGG | + | chr5_3:49154452-49154471 | None:intergenic | 40.0% | |
CAAACATCAAGGGAACACAA+TGG | - | chr5_3:49154450-49154469 | Msa0815530:intron | 40.0% | |
TCCGGTACCTAACAAAATGA+TGG | - | chr5_3:49154832-49154851 | Msa0815530:intron | 40.0% | |
TCATGGGGATTCATCAATGA+TGG | - | chr5_3:49154927-49154946 | Msa0815530:CDS | 40.0% | |
!! | TCCAAGCTTTGAGATCATTG+AGG | - | chr5_3:49155004-49155023 | Msa0815530:CDS | 40.0% |
TCCTCAATGATCTCAAAGCT+TGG | + | chr5_3:49155008-49155027 | None:intergenic | 40.0% | |
GTGTTTGTGAAGGAACAACT+TGG | + | chr5_3:49155091-49155110 | None:intergenic | 40.0% | |
AAGTTCAAGGCCTATGTGAT+GGG | - | chr5_3:49155212-49155231 | Msa0815530:intron | 40.0% | |
GATGCATCGTGTTTATTTGG+AGG | - | chr5_3:49155304-49155323 | Msa0815530:intron | 40.0% | |
GGAATGAGTCAAAAGAGGTT+TGG | - | chr5_3:49155405-49155424 | Msa0815530:intron | 40.0% | |
GTTGGTGTAAAATGTGAGAG+AGG | - | chr5_3:49155431-49155450 | Msa0815530:intron | 40.0% | |
ATGTGAGAGAGGATTAAGTG+TGG | - | chr5_3:49155442-49155461 | Msa0815530:intron | 40.0% | |
! | AGGATTAAGTGTGGTCTTGA+AGG | - | chr5_3:49155451-49155470 | Msa0815530:intron | 40.0% |
! | AGTGTGGTCTTGAAGGAAAT+AGG | - | chr5_3:49155458-49155477 | Msa0815530:intron | 40.0% |
! | GGTACAAAGCGCCAAAAATA+TGG | + | chr5_3:49155495-49155514 | None:intergenic | 40.0% |
CATGTATGGCAGGGTTTGAT+TGG | - | chr5_3:49150035-49150054 | Msa0815530:CDS | 45.0% | |
AAACCTGGAGGCAATGAAAC+AGG | + | chr5_3:49150133-49150152 | None:intergenic | 45.0% | |
TTTCATTGCCTCCAGGTTTC+AGG | - | chr5_3:49150134-49150153 | Msa0815530:CDS | 45.0% | |
GCAACAAGTTCTTCATCGGT+AGG | + | chr5_3:49150166-49150185 | None:intergenic | 45.0% | |
AAATTACCTGGCAAGTCCCA+CGG | + | chr5_3:49150268-49150287 | None:intergenic | 45.0% | |
GAGTAATCCATCGAGTCTTG+TGG | - | chr5_3:49150622-49150641 | Msa0815530:intron | 45.0% | |
CTTTCATTGGGTCCCTGTTA+AGG | + | chr5_3:49151068-49151087 | None:intergenic | 45.0% | |
TACCTGGGAATGATATGGAG+TGG | - | chr5_3:49152145-49152164 | Msa0815530:CDS | 45.0% | |
TACCACTCCATATCATTCCC+AGG | + | chr5_3:49152150-49152169 | None:intergenic | 45.0% | |
ACGAATCGTGCAACCAAATC+TGG | - | chr5_3:49152213-49152232 | Msa0815530:CDS | 45.0% | |
CGCCTTCCAATATCCAGATT+TGG | + | chr5_3:49152229-49152248 | None:intergenic | 45.0% | |
AATTCTCAAGCTCGAGCAGT+AGG | - | chr5_3:49152270-49152289 | Msa0815530:CDS | 45.0% | |
ATTCTCAAGCTCGAGCAGTA+GGG | - | chr5_3:49152271-49152290 | Msa0815530:CDS | 45.0% | |
CAATTTGTACGAGAGCCATG+GGG | + | chr5_3:49152333-49152352 | None:intergenic | 45.0% | |
CCAATTTGTACGAGAGCCAT+GGG | + | chr5_3:49152334-49152353 | None:intergenic | 45.0% | |
CCATGGCTCTCGTACAAATT+GGG | - | chr5_3:49152332-49152351 | Msa0815530:CDS | 45.0% | |
! | AAACTCGGTTGGTCAGTTGA+AGG | + | chr5_3:49152490-49152509 | None:intergenic | 45.0% |
CATAGAGCATATGCATCCTG+AGG | + | chr5_3:49152765-49152784 | None:intergenic | 45.0% | |
!! | CGCTTGTTATCTGGTTTGCA+TGG | + | chr5_3:49152854-49152873 | None:intergenic | 45.0% |
!! | GTGATTGGTCGCTTGTTATC+TGG | + | chr5_3:49152863-49152882 | None:intergenic | 45.0% |
TAACAAGCGACCAATCACCA+AGG | - | chr5_3:49152865-49152884 | Msa0815530:CDS | 45.0% | |
AACAAGCGACCAATCACCAA+GGG | - | chr5_3:49152866-49152885 | Msa0815530:CDS | 45.0% | |
! | GGCTTGTTCACCTCACAATA+TGG | - | chr5_3:49152953-49152972 | Msa0815530:CDS | 45.0% |
! | CTTGGATGGAGGGTATGTTA+TGG | + | chr5_3:49153096-49153115 | None:intergenic | 45.0% |
CATAACATACCCTCCATCCA+AGG | - | chr5_3:49153094-49153113 | Msa0815530:intron | 45.0% | |
ACATTCAAGCTTCTTGCGTG+CGG | + | chr5_3:49153221-49153240 | None:intergenic | 45.0% | |
TGGGACGCGATAATTGCATA+TGG | - | chr5_3:49153273-49153292 | Msa0815530:intron | 45.0% | |
GGGACGCGATAATTGCATAT+GGG | - | chr5_3:49153274-49153293 | Msa0815530:intron | 45.0% | |
GAGTTGAACCTAGGACAAGT+TGG | - | chr5_3:49153440-49153459 | Msa0815530:intron | 45.0% | |
GTTGAACCTAGGACAAGTTG+GGG | - | chr5_3:49153442-49153461 | Msa0815530:intron | 45.0% | |
GAGGCCTAAAACCTTAGCTT+TGG | - | chr5_3:49153584-49153603 | Msa0815530:intron | 45.0% | |
TCTTAGGCGAGACTTATGCA+CGG | + | chr5_3:49153630-49153649 | None:intergenic | 45.0% | |
AGTGTGCAAGGATGCAACAT+AGG | - | chr5_3:49153839-49153858 | Msa0815530:intron | 45.0% | |
GTTTACTATGCCTCCATTGG+AGG | - | chr5_3:49153861-49153880 | Msa0815530:intron | 45.0% | |
GTGGAGGAATTTCCTCAAGT+TGG | - | chr5_3:49153883-49153902 | Msa0815530:intron | 45.0% | |
! | CTTCCTTGTTGTGTCACATG+AGG | + | chr5_3:49153913-49153932 | None:intergenic | 45.0% |
ATCAAGAGTCAAAGGCCAAG+CGG | - | chr5_3:49154178-49154197 | Msa0815530:intron | 45.0% | |
CAAATTCTCTACCATCCGCT+TGG | + | chr5_3:49154196-49154215 | None:intergenic | 45.0% | |
GAAGTTCAAGGCCTATGTGA+TGG | - | chr5_3:49155211-49155230 | Msa0815530:intron | 45.0% | |
AGTTCAAGGCCTATGTGATG+GGG | - | chr5_3:49155213-49155232 | Msa0815530:intron | 45.0% | |
GTTCCATTTCCCCATCACAT+AGG | + | chr5_3:49155225-49155244 | None:intergenic | 45.0% | |
! | TTTTGGCGCTTTGTACCACA+TGG | - | chr5_3:49155498-49155517 | Msa0815530:five_prime_UTR | 45.0% |
TTTGGCGCTTTGTACCACAT+GGG | - | chr5_3:49155499-49155518 | Msa0815530:five_prime_UTR | 45.0% | |
!! | ATATATATATATATATATAG+GGG | - | chr5_3:49151170-49151189 | Msa0815530:CDS | 5.0% |
!! | TATATATATATATATATATG+GGG | + | chr5_3:49151482-49151501 | None:intergenic | 5.0% |
!! | AAAAAAAAAAAAAAAACAAA+GGG | + | chr5_3:49151628-49151647 | None:intergenic | 5.0% |
!!! | TTTTTTTATATAAAATTTTG+AGG | - | chr5_3:49153565-49153584 | Msa0815530:intron | 5.0% |
!!! | AATAGTATTTTTATTTTTTT+CGG | - | chr5_3:49154256-49154275 | Msa0815530:intron | 5.0% |
CAAGTTCTTCATCGGTAGGG+TGG | + | chr5_3:49150162-49150181 | None:intergenic | 50.0% | |
TGAACCAGATATCCTCCTCC+TGG | - | chr5_3:49150599-49150618 | Msa0815530:intron | 50.0% | |
GAACCAGATATCCTCCTCCT+GGG | - | chr5_3:49150600-49150619 | Msa0815530:intron | 50.0% | |
!! | AGACTCGATGGATTACTCCC+AGG | + | chr5_3:49150620-49150639 | None:intergenic | 50.0% |
TTGAGTCCCACAAGACTCGA+TGG | + | chr5_3:49150632-49150651 | None:intergenic | 50.0% | |
AGATGGTCCCCTTCACCTTT+AGG | - | chr5_3:49151738-49151757 | Msa0815530:intron | 50.0% | |
TCGGGTACTTCCTATCACGA+GGG | + | chr5_3:49152182-49152201 | None:intergenic | 50.0% | |
TTCGGGTACTTCCTATCACG+AGG | + | chr5_3:49152183-49152202 | None:intergenic | 50.0% | |
!! | CGTGATAGGAAGTACCCGAA+TGG | - | chr5_3:49152183-49152202 | Msa0815530:CDS | 50.0% |
TCTGGATATTGGAAGGCGAC+TGG | - | chr5_3:49152231-49152250 | Msa0815530:CDS | 50.0% | |
CTGGATATTGGAAGGCGACT+GGG | - | chr5_3:49152232-49152251 | Msa0815530:CDS | 50.0% | |
ATATTGGAAGGCGACTGGGA+AGG | - | chr5_3:49152236-49152255 | Msa0815530:CDS | 50.0% | |
TTCTCAAGCTCGAGCAGTAG+GGG | - | chr5_3:49152272-49152291 | Msa0815530:CDS | 50.0% | |
CCCATGGCTCTCGTACAAAT+TGG | - | chr5_3:49152331-49152350 | Msa0815530:CDS | 50.0% | |
CCCAATTTGTACGAGAGCCA+TGG | + | chr5_3:49152335-49152354 | None:intergenic | 50.0% | |
! | TGAAACCACTCCTAGCTTGC+AGG | - | chr5_3:49152389-49152408 | Msa0815530:CDS | 50.0% |
AGAAGGAGAACCTGCAAGCT+AGG | + | chr5_3:49152402-49152421 | None:intergenic | 50.0% | |
TCATCACCCCAACTTGTCCT+AGG | + | chr5_3:49153451-49153470 | None:intergenic | 50.0% | |
! | TAGGACAAGTTGGGGTGATG+AGG | - | chr5_3:49153450-49153469 | Msa0815530:intron | 50.0% |
GGACCAAATGGCCAAAGCTA+AGG | + | chr5_3:49153598-49153617 | None:intergenic | 50.0% | |
TACTATGCCTCCATTGGAGG+TGG | - | chr5_3:49153864-49153883 | Msa0815530:intron | 50.0% | |
AATTCCTCCACCTCCAATGG+AGG | + | chr5_3:49153874-49153893 | None:intergenic | 50.0% | |
GGAAATTCCTCCACCTCCAA+TGG | + | chr5_3:49153877-49153896 | None:intergenic | 50.0% | |
AGGGAACACAATGGCATGCA+AGG | - | chr5_3:49154459-49154478 | Msa0815530:intron | 50.0% | |
! | AGGCCTATGTGATGGGGAAA+TGG | - | chr5_3:49155219-49155238 | Msa0815530:intron | 50.0% |
GCACCTGTTTCATTGCCTCC+AGG | - | chr5_3:49150127-49150146 | Msa0815530:CDS | 55.0% | |
GTAGGGTGGAACCTGAAACC+TGG | + | chr5_3:49150148-49150167 | None:intergenic | 55.0% | |
ACTCCCAGGAGGAGGATATC+TGG | + | chr5_3:49150606-49150625 | None:intergenic | 55.0% | |
!! | GATGGATTACTCCCAGGAGG+AGG | + | chr5_3:49150614-49150633 | None:intergenic | 55.0% |
!! | CTCGATGGATTACTCCCAGG+AGG | + | chr5_3:49150617-49150636 | None:intergenic | 55.0% |
!! | TATCGAGGAAGAGCACCCCA+TGG | - | chr5_3:49152315-49152334 | Msa0815530:CDS | 55.0% |
GAGAACCTGCAAGCTAGGAG+TGG | + | chr5_3:49152397-49152416 | None:intergenic | 55.0% | |
TTCTCACGTTTGGTTGGGCG+TGG | - | chr5_3:49153195-49153214 | Msa0815530:intron | 55.0% | |
ACTTATGCACGGACGGTGCA+AGG | + | chr5_3:49153619-49153638 | None:intergenic | 55.0% | |
AGGCGAGACTTATGCACGGA+CGG | + | chr5_3:49153626-49153645 | None:intergenic | 55.0% | |
GTGTCTAAGCTTGGGGTCCA+AGG | + | chr5_3:49153728-49153747 | None:intergenic | 55.0% | |
TATGCCTCCATTGGAGGTGG+AGG | - | chr5_3:49153867-49153886 | Msa0815530:intron | 55.0% | |
AGAGTCAAAGGCCAAGCGGA+TGG | - | chr5_3:49154182-49154201 | Msa0815530:intron | 55.0% | |
!! | TGTACCACATGGGCTAGCCA+TGG | - | chr5_3:49155509-49155528 | Msa0815530:five_prime_UTR | 55.0% |
! | TTAGCCATGGCTAGCCCATG+TGG | + | chr5_3:49155516-49155535 | None:intergenic | 55.0% |
GGGTGGAACCTGAAACCTGG+AGG | + | chr5_3:49150145-49150164 | None:intergenic | 60.0% | |
TGTGAACCGTGGGACTTGCC+AGG | - | chr5_3:49150259-49150278 | Msa0815530:CDS | 60.0% | |
CGGACGGTGCAAGGACCAAA+TGG | + | chr5_3:49153610-49153629 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 49149651 | 49155535 | 49149651 | ID=Msa0815530;Name=Msa0815530 |
chr5_3 | mRNA | 49149651 | 49155535 | 49149651 | ID=Msa0815530-mRNA-1;Parent=Msa0815530;Name=Msa0815530-mRNA-1;_AED=0.05;_eAED=0.05;_QI=132|1|0.85|1|0.83|0.71|7|0|650 |
chr5_3 | exon | 49149651 | 49150315 | 49149651 | ID=Msa0815530-mRNA-1:exon:14761;Parent=Msa0815530-mRNA-1 |
chr5_3 | exon | 49150706 | 49150781 | 49150706 | ID=Msa0815530-mRNA-1:exon:14760;Parent=Msa0815530-mRNA-1 |
chr5_3 | exon | 49150935 | 49151363 | 49150935 | ID=Msa0815530-mRNA-1:exon:14759;Parent=Msa0815530-mRNA-1 |
chr5_3 | exon | 49152071 | 49152418 | 49152071 | ID=Msa0815530-mRNA-1:exon:14758;Parent=Msa0815530-mRNA-1 |
chr5_3 | exon | 49152776 | 49153053 | 49152776 | ID=Msa0815530-mRNA-1:exon:14757;Parent=Msa0815530-mRNA-1 |
chr5_3 | exon | 49154906 | 49155139 | 49154906 | ID=Msa0815530-mRNA-1:exon:14756;Parent=Msa0815530-mRNA-1 |
chr5_3 | exon | 49155481 | 49155535 | 49155481 | ID=Msa0815530-mRNA-1:exon:14755;Parent=Msa0815530-mRNA-1 |
chr5_3 | five_prime_UTR | 49155481 | 49155535 | 49155481 | ID=Msa0815530-mRNA-1:five_prime_utr;Parent=Msa0815530-mRNA-1 |
chr5_3 | five_prime_UTR | 49155063 | 49155139 | 49155063 | ID=Msa0815530-mRNA-1:five_prime_utr;Parent=Msa0815530-mRNA-1 |
chr5_3 | CDS | 49154906 | 49155062 | 49154906 | ID=Msa0815530-mRNA-1:cds;Parent=Msa0815530-mRNA-1 |
chr5_3 | CDS | 49152776 | 49153053 | 49152776 | ID=Msa0815530-mRNA-1:cds;Parent=Msa0815530-mRNA-1 |
chr5_3 | CDS | 49152071 | 49152418 | 49152071 | ID=Msa0815530-mRNA-1:cds;Parent=Msa0815530-mRNA-1 |
chr5_3 | CDS | 49150935 | 49151363 | 49150935 | ID=Msa0815530-mRNA-1:cds;Parent=Msa0815530-mRNA-1 |
chr5_3 | CDS | 49150706 | 49150781 | 49150706 | ID=Msa0815530-mRNA-1:cds;Parent=Msa0815530-mRNA-1 |
chr5_3 | CDS | 49149651 | 49150315 | 49149651 | ID=Msa0815530-mRNA-1:cds;Parent=Msa0815530-mRNA-1 |
Gene Sequence |
Protein sequence |