Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0819660 | AES99840.2 | 88.361 | 1031 | 92 | 6 | 1 | 1009 | 1 | 1025 | 0.0 | 1835 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0819660 | sp|Q9C5X9|HAC1_ARATH | 44.587 | 859 | 375 | 17 | 250 | 1017 | 835 | 1683 | 0.0 | 712 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0819660 | G7KH97 | 88.361 | 1031 | 92 | 6 | 1 | 1009 | 1 | 1025 | 0.0 | 1835 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0819660 | TR | TAZ |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0819660 | MtrunA17_Chr5g0438991 | 88.705 | 965 | 80 | 7 | 67 | 1009 | 1 | 958 | 0.0 | 1719 |
| Msa0819660 | MtrunA17_Chr3g0138411 | 64.567 | 1016 | 209 | 13 | 121 | 1025 | 231 | 1206 | 0.0 | 1247 |
| Msa0819660 | MtrunA17_Chr3g0138411 | 62.281 | 114 | 30 | 2 | 1 | 101 | 1 | 114 | 1.10e-28 | 124 |
| Msa0819660 | MtrunA17_Chr3g0133461 | 66.840 | 959 | 202 | 14 | 175 | 1025 | 393 | 1343 | 0.0 | 1220 |
| Msa0819660 | MtrunA17_Chr3g0133461 | 79.167 | 48 | 10 | 0 | 57 | 104 | 17 | 64 | 1.38e-12 | 72.4 |
| Msa0819660 | MtrunA17_Chr6g0456861 | 78.581 | 761 | 122 | 11 | 283 | 1018 | 28 | 772 | 0.0 | 1195 |
| Msa0819660 | MtrunA17_Chr6g0456861 | 78.049 | 41 | 9 | 0 | 9 | 49 | 5 | 45 | 5.95e-12 | 70.1 |
| Msa0819660 | MtrunA17_Chr6g0456851 | 49.943 | 871 | 293 | 25 | 16 | 794 | 11 | 830 | 0.0 | 723 |
| Msa0819660 | MtrunA17_Chr6g0456851 | 65.672 | 67 | 23 | 0 | 839 | 905 | 807 | 873 | 1.51e-19 | 94.7 |
| Msa0819660 | MtrunA17_Chr4g0000031 | 45.690 | 812 | 351 | 13 | 289 | 1017 | 891 | 1695 | 0.0 | 688 |
| Msa0819660 | MtrunA17_Chr6g0456931 | 71.138 | 246 | 70 | 1 | 510 | 755 | 1 | 245 | 1.95e-121 | 371 |
| Msa0819660 | MtrunA17_Chr5g0401991 | 79.130 | 230 | 35 | 4 | 740 | 965 | 1 | 221 | 2.27e-116 | 357 |
| Msa0819660 | MtrunA17_Chr5g0402001 | 88.119 | 101 | 12 | 0 | 588 | 688 | 1 | 101 | 4.54e-57 | 191 |
| Msa0819660 | MtrunA17_Chr5g0439001 | 75.472 | 106 | 25 | 1 | 690 | 795 | 1 | 105 | 1.69e-44 | 157 |
| Msa0819660 | MtrunA17_Chr1g0169961 | 67.241 | 116 | 37 | 1 | 283 | 398 | 54 | 168 | 4.02e-44 | 157 |
| Msa0819660 | MtrunA17_Chr6g0456921 | 50.318 | 157 | 18 | 6 | 588 | 743 | 1 | 98 | 1.19e-33 | 132 |
| Msa0819660 | MtrunA17_Chr6g0456791 | 52.128 | 188 | 47 | 2 | 157 | 344 | 1 | 145 | 1.88e-31 | 121 |
| Msa0819660 | MtrunA17_Chr6g0456911 | 89.091 | 55 | 6 | 0 | 851 | 905 | 6 | 60 | 1.87e-26 | 103 |
| Msa0819660 | MtrunA17_Chr0c02g0489811 | 87.719 | 57 | 7 | 0 | 849 | 905 | 5 | 61 | 4.71e-26 | 102 |
| Msa0819660 | MtrunA17_Chr7g0229221 | 84.211 | 57 | 9 | 0 | 849 | 905 | 5 | 61 | 8.54e-25 | 99.0 |
| Msa0819660 | MtrunA17_Chr0c02g0489731 | 80.702 | 57 | 11 | 0 | 849 | 905 | 5 | 61 | 2.52e-23 | 94.7 |
| Msa0819660 | MtrunA17_Chr0c02g0489721 | 85.106 | 47 | 7 | 0 | 779 | 825 | 1 | 47 | 1.17e-22 | 91.7 |
| Msa0819660 | MtrunA17_Chr7g0229231 | 85.106 | 47 | 7 | 0 | 779 | 825 | 1 | 47 | 1.17e-22 | 91.7 |
| Msa0819660 | MtrunA17_Chr0c02g0489821 | 86.667 | 45 | 6 | 0 | 781 | 825 | 1 | 45 | 9.90e-22 | 89.0 |
| Msa0819660 | MtrunA17_Chr6g0456781 | 60.563 | 71 | 19 | 3 | 370 | 439 | 25 | 87 | 9.41e-17 | 78.2 |
| Msa0819660 | MtrunA17_Chr6g0456771 | 53.571 | 84 | 25 | 1 | 249 | 332 | 27 | 96 | 1.31e-16 | 76.3 |
| Msa0819660 | MtrunA17_Chr6g0456941 | 44.000 | 100 | 28 | 3 | 248 | 337 | 150 | 231 | 4.72e-15 | 75.9 |
| Msa0819660 | MtrunA17_Chr5g0402011 | 87.097 | 31 | 4 | 0 | 434 | 464 | 21 | 51 | 6.51e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0819660 | AT1G79000.2 | 44.587 | 859 | 375 | 17 | 250 | 1017 | 835 | 1683 | 0.0 | 713 |
| Msa0819660 | AT1G79000.3 | 44.587 | 859 | 375 | 17 | 250 | 1017 | 811 | 1659 | 0.0 | 712 |
| Msa0819660 | AT1G79000.1 | 44.587 | 859 | 375 | 17 | 250 | 1017 | 835 | 1683 | 0.0 | 712 |
| Msa0819660 | AT1G16710.2 | 44.928 | 828 | 361 | 14 | 279 | 1017 | 842 | 1663 | 0.0 | 690 |
| Msa0819660 | AT1G16710.3 | 44.928 | 828 | 361 | 14 | 279 | 1017 | 845 | 1666 | 0.0 | 690 |
| Msa0819660 | AT1G16710.10 | 44.928 | 828 | 361 | 14 | 279 | 1017 | 845 | 1666 | 0.0 | 690 |
| Msa0819660 | AT1G16710.8 | 44.928 | 828 | 361 | 14 | 279 | 1017 | 845 | 1666 | 0.0 | 690 |
| Msa0819660 | AT1G16710.7 | 44.928 | 828 | 361 | 14 | 279 | 1017 | 845 | 1666 | 0.0 | 690 |
| Msa0819660 | AT1G16710.6 | 44.928 | 828 | 361 | 14 | 279 | 1017 | 806 | 1627 | 0.0 | 689 |
| Msa0819660 | AT1G16710.4 | 44.928 | 828 | 361 | 14 | 279 | 1017 | 806 | 1627 | 0.0 | 689 |
| Msa0819660 | AT1G16710.1 | 44.928 | 828 | 361 | 14 | 279 | 1017 | 871 | 1692 | 0.0 | 689 |
| Msa0819660 | AT1G16710.5 | 44.928 | 828 | 361 | 14 | 279 | 1017 | 806 | 1627 | 0.0 | 689 |
| Msa0819660 | AT3G12980.1 | 42.823 | 843 | 381 | 18 | 254 | 1011 | 796 | 1622 | 0.0 | 657 |
| Msa0819660 | AT3G12980.2 | 42.823 | 843 | 381 | 18 | 254 | 1011 | 715 | 1541 | 0.0 | 657 |
| Msa0819660 | AT1G55970.1 | 42.478 | 791 | 370 | 16 | 294 | 1014 | 652 | 1427 | 0.0 | 598 |
| Msa0819660 | AT1G67220.1 | 42.914 | 748 | 349 | 14 | 312 | 993 | 600 | 1335 | 0.0 | 591 |
| Msa0819660 | AT1G55970.2 | 42.478 | 791 | 356 | 17 | 294 | 1014 | 652 | 1413 | 0.0 | 588 |
| Msa0819660 | AT1G16710.9 | 50.346 | 578 | 264 | 9 | 279 | 836 | 845 | 1419 | 0.0 | 570 |
Find 182 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACTCTTTGTCCTTCTTTC+AGG | 0.063800 | 5_3:+56369778 | None:intergenic |
| TTTCTTCCTACTACTGAAAA+AGG | 0.155283 | 5_3:-56369261 | Msa0819660:CDS |
| AACAGAGAACTTATTATTAT+TGG | 0.166126 | 5_3:-56371615 | Msa0819660:CDS |
| GGAATGTATGTCCAGGAATT+TGG | 0.199160 | 5_3:-56369871 | Msa0819660:CDS |
| GAAAGTAAATAAGCAGTTTC+TGG | 0.202627 | 5_3:-56370121 | Msa0819660:CDS |
| CACTGAATGCAAGAAGTTTC+AGG | 0.206037 | 5_3:-56368801 | Msa0819660:CDS |
| AGAGTAGATTGTTTGAAAAT+AGG | 0.206122 | 5_3:-56368467 | Msa0819660:CDS |
| CACTCGAATTTCACACTTAC+TGG | 0.209713 | 5_3:+56368052 | None:intergenic |
| TGTCGATTCCCACTGATATT+TGG | 0.216999 | 5_3:+56371748 | None:intergenic |
| TGACGGTTGTATACCATTTC+AGG | 0.222219 | 5_3:+56372421 | None:intergenic |
| GCCTGTGCTCCTTTAGAAAA+AGG | 0.242248 | 5_3:-56369563 | Msa0819660:CDS |
| CGGCGTAGCTTATCATTCTT+TGG | 0.248851 | 5_3:+56369497 | None:intergenic |
| GAGTAGATTGTTTGAAAATA+GGG | 0.252944 | 5_3:-56368466 | Msa0819660:CDS |
| CTTGTTAAGGGTTGTCATTT+TGG | 0.265892 | 5_3:-56372541 | Msa0819660:CDS |
| CCAGACGTCAGGAAAATTAT+TGG | 0.269876 | 5_3:+56371929 | None:intergenic |
| AGCATCATTTATTCTATTAG+AGG | 0.271507 | 5_3:+56371383 | None:intergenic |
| CGCATTCAGAGCCAAATTCC+TGG | 0.289822 | 5_3:+56369860 | None:intergenic |
| GAGGGTGTTATCTCGTAAAT+TGG | 0.305119 | 5_3:+56371789 | None:intergenic |
| TTGCATCACCAGAATGTCTT+TGG | 0.306980 | 5_3:+56369068 | None:intergenic |
| CAAGCCTTCCAAAGACATTC+TGG | 0.318086 | 5_3:-56369076 | Msa0819660:CDS |
| CGCCTAAAAGAAATTGAAAA+TGG | 0.318929 | 5_3:-56370562 | Msa0819660:CDS |
| AACACCCTCGAAAGGCTTAC+AGG | 0.328606 | 5_3:-56371775 | Msa0819660:CDS |
| GTTTCACAACTTGCTACATA+TGG | 0.332569 | 5_3:-56369586 | Msa0819660:CDS |
| CATACTTTGATGGAGACTTC+TGG | 0.341046 | 5_3:-56369209 | Msa0819660:CDS |
| TGTTTGTCCTCTACATCAAT+AGG | 0.343878 | 5_3:+56371492 | None:intergenic |
| AATGTATACACAACGTTGAT+TGG | 0.347633 | 5_3:+56369831 | None:intergenic |
| CCACAAAAGACGGAAAATAT+TGG | 0.348245 | 5_3:-56371859 | Msa0819660:CDS |
| TCTCGTTTGCCATACTTTGA+TGG | 0.348808 | 5_3:-56369219 | Msa0819660:CDS |
| TGGGCGTGTGCAAGCTCTAT+TGG | 0.366488 | 5_3:-56372042 | Msa0819660:CDS |
| AAGTGTGTTCATCAGAACTA+TGG | 0.369353 | 5_3:+56368661 | None:intergenic |
| AGTGTCAAATAGAACATTAA+AGG | 0.370702 | 5_3:-56369112 | Msa0819660:CDS |
| TTGTCGTAGAGCTAAAGTTT+TGG | 0.372223 | 5_3:-56367806 | Msa0819660:CDS |
| TCAACACCAGTATGTCAATC+TGG | 0.372617 | 5_3:-56368297 | Msa0819660:CDS |
| ATCGAGAGGATGCTTGTTAA+GGG | 0.372876 | 5_3:-56372553 | None:intergenic |
| CTTCTGTTTCAGAAAATTGA+AGG | 0.379117 | 5_3:-56369913 | Msa0819660:CDS |
| GCACCAAAGTTAGCTGCCTT+TGG | 0.380260 | 5_3:+56370523 | None:intergenic |
| CAAGAACATTTCCATGGAAA+TGG | 0.381561 | 5_3:-56371544 | Msa0819660:CDS |
| AATCGAGAGGATGCTTGTTA+AGG | 0.382130 | 5_3:-56372554 | None:intergenic |
| GCCAGCATTGTAAGAAGATA+TGG | 0.385181 | 5_3:-56368019 | Msa0819660:intron |
| ATATATTTACAAAGATTCAT+TGG | 0.387321 | 5_3:+56367761 | None:intergenic |
| GAGGACAAACAAGAAGGAAT+TGG | 0.402147 | 5_3:-56371480 | Msa0819660:CDS |
| CAGAAGTCTCCATCAAAGTA+TGG | 0.405354 | 5_3:+56369210 | None:intergenic |
| CAGAATGTCTTTGGAAGGCT+TGG | 0.407235 | 5_3:+56369077 | None:intergenic |
| CTTATTATTATTGGTGATGA+TGG | 0.411137 | 5_3:-56371606 | Msa0819660:CDS |
| TCTGAGAAAGGAATCTGTTC+AGG | 0.416816 | 5_3:-56371307 | Msa0819660:intron |
| TCAGTAGGGTAATTCTCCTC+TGG | 0.420217 | 5_3:+56370090 | None:intergenic |
| AAATATATAGAGTGCATAAT+AGG | 0.428094 | 5_3:-56367746 | Msa0819660:three_prime_UTR |
| TTCTTGATCTGAGAACAGTT+TGG | 0.428112 | 5_3:+56368089 | None:intergenic |
| TCCCAGACACTATCACTTCA+TGG | 0.428163 | 5_3:+56368837 | None:intergenic |
| TGATTCCCAGATTGACATAC+TGG | 0.428638 | 5_3:+56368291 | None:intergenic |
| AGTATGTCAATCTGGGAATC+AGG | 0.429264 | 5_3:-56368289 | Msa0819660:CDS |
| TCATGCAAGAGAGAGAAAAC+TGG | 0.430015 | 5_3:-56370441 | Msa0819660:CDS |
| TCAGGAGTCAAATGAGGAAA+TGG | 0.431304 | 5_3:-56368271 | Msa0819660:intron |
| ATGTATACACAACGTTGATT+GGG | 0.434405 | 5_3:+56369832 | None:intergenic |
| AAGTGTGAAATTCGAGTGAA+TGG | 0.435360 | 5_3:-56368047 | Msa0819660:CDS |
| TGATGAAGTACTTGAAGAAC+CGG | 0.437567 | 5_3:-56370774 | Msa0819660:intron |
| GGTGACAAAATCGCATTCAA+TGG | 0.438280 | 5_3:-56370836 | Msa0819660:CDS |
| ATCTCAATGCCGCGCAACTA+AGG | 0.439497 | 5_3:-56368129 | Msa0819660:CDS |
| TTTGAGCATCTGTCCCGTCC+TGG | 0.446030 | 5_3:+56371451 | None:intergenic |
| GCCAGCCTGTAAGCCTTTCG+AGG | 0.448458 | 5_3:+56371770 | None:intergenic |
| TTACCAAAGGCAGCTAACTT+TGG | 0.452233 | 5_3:-56370526 | Msa0819660:CDS |
| ATCAATAGGAACATGCATAT+CGG | 0.452882 | 5_3:+56371506 | None:intergenic |
| TTCAGGCCTAAAATACTTGA+CGG | 0.457367 | 5_3:+56369795 | None:intergenic |
| AAAGTTAGCTGCCTTTGGTA+AGG | 0.457759 | 5_3:+56370528 | None:intergenic |
| TTCTCCAATGTCCATTTCCA+TGG | 0.464607 | 5_3:+56371533 | None:intergenic |
| GAAAATATTGGAGTCTGGTT+GGG | 0.466502 | 5_3:-56371847 | Msa0819660:CDS |
| CAAACTGAAACTGAGACTTC+TGG | 0.468204 | 5_3:+56368424 | None:intergenic |
| CAGTTGCCAATTATGTGAAA+AGG | 0.470295 | 5_3:-56370993 | Msa0819660:CDS |
| CGTCGTTTACCATGAGATAC+TGG | 0.470570 | 5_3:-56369740 | Msa0819660:intron |
| CGAGGTGCATACACTTTGTC+AGG | 0.471850 | 5_3:-56368628 | Msa0819660:intron |
| TGCCATGAAGTGATAGTGTC+TGG | 0.473473 | 5_3:-56368839 | Msa0819660:CDS |
| TGAGATATTTGCAACTATGC+TGG | 0.477785 | 5_3:-56372261 | Msa0819660:CDS |
| AGACGGAAAATATTGGAGTC+TGG | 0.478521 | 5_3:-56371852 | Msa0819660:CDS |
| GGACGGGACAGATGCTCAAA+AGG | 0.478902 | 5_3:-56371448 | Msa0819660:CDS |
| GCTGCCTTTGGTAAGGGAAA+AGG | 0.481258 | 5_3:+56370535 | None:intergenic |
| GATCATCATGGAGGAATACT+TGG | 0.481567 | 5_3:+56368386 | None:intergenic |
| GGGCGTGTGCAAGCTCTATT+GGG | 0.483202 | 5_3:-56372041 | Msa0819660:CDS |
| GGAAAATATTGGAGTCTGGT+TGG | 0.485967 | 5_3:-56371848 | Msa0819660:CDS |
| GATCTATAAGAGAATTCAGT+AGG | 0.487595 | 5_3:+56370075 | None:intergenic |
| ATGAACCTGGAGACGTTGAA+TGG | 0.492297 | 5_3:-56372062 | Msa0819660:CDS |
| GGCAGCTAACTTTGGTGCTA+AGG | 0.497818 | 5_3:-56370518 | Msa0819660:CDS |
| TTTCACAACTTGCTACATAT+GGG | 0.498062 | 5_3:-56369585 | Msa0819660:CDS |
| TCACAGTAGGGTTGTGCAGA+TGG | 0.500457 | 5_3:+56368358 | None:intergenic |
| TACAAAAGAAAACTTCTTCG+TGG | 0.500683 | 5_3:-56368888 | Msa0819660:CDS |
| AGTTGCCAATTATGTGAAAA+GGG | 0.503126 | 5_3:-56370992 | Msa0819660:CDS |
| CACGCCCATTCAACGTCTCC+AGG | 0.506080 | 5_3:+56372057 | None:intergenic |
| GTGACAAAATCGCATTCAAT+GGG | 0.506600 | 5_3:-56370835 | Msa0819660:CDS |
| AGTGTGAAATTCGAGTGAAT+GGG | 0.509029 | 5_3:-56368046 | Msa0819660:CDS |
| ACCATATCTTCTTACAATGC+TGG | 0.510556 | 5_3:+56368018 | None:intergenic |
| AAGTTAGCTGCCTTTGGTAA+GGG | 0.512559 | 5_3:+56370529 | None:intergenic |
| ACTTACCGATGCTGCTTCAA+AGG | 0.514769 | 5_3:-56372228 | Msa0819660:intron |
| AACTGTGCTAAGTGACCACT+TGG | 0.516161 | 5_3:-56370485 | Msa0819660:CDS |
| CTGGAGGTGTCATCCTGAAA+TGG | 0.516487 | 5_3:-56372434 | Msa0819660:CDS |
| ACCGAAGAAAATATTGCCGT+TGG | 0.516553 | 5_3:-56369309 | Msa0819660:CDS |
| CAGTAGGGTAATTCTCCTCT+GGG | 0.517758 | 5_3:+56370091 | None:intergenic |
| CATTGATTGATTCGTTCACA+TGG | 0.521465 | 5_3:-56371356 | Msa0819660:CDS |
| TTTAACACAGATTACTTCTG+AGG | 0.521977 | 5_3:-56371038 | Msa0819660:intron |
| AACCAGGATTCTCCATGGAC+TGG | 0.527677 | 5_3:-56372453 | Msa0819660:CDS |
| TTCAGTGTTGCCATCATGAG+TGG | 0.535190 | 5_3:+56371959 | None:intergenic |
| GAAAGCGACGGAGCAGTCAA+TGG | 0.536502 | 5_3:-56367784 | Msa0819660:CDS |
| CTCCAGTCCATGGAGAATCC+TGG | 0.539123 | 5_3:+56372451 | None:intergenic |
| TGAACCTGGAGACGTTGAAT+GGG | 0.540305 | 5_3:-56372061 | Msa0819660:CDS |
| CAACACCAGTATGTCAATCT+GGG | 0.540531 | 5_3:-56368296 | Msa0819660:CDS |
| TACATTCTCACAATCTGCCT+CGG | 0.541414 | 5_3:-56372000 | Msa0819660:CDS |
| ATTTCCATGGAAATGGACAT+TGG | 0.541788 | 5_3:-56371537 | Msa0819660:CDS |
| ACATGTTAGTAGTCTGAGAA+AGG | 0.542692 | 5_3:-56371319 | Msa0819660:CDS |
| CCCTCGAAAGGCTTACAGGC+TGG | 0.545774 | 5_3:-56371771 | Msa0819660:CDS |
| TCTATACAAGACCAGACGTC+AGG | 0.546449 | 5_3:+56371918 | None:intergenic |
| TAGGGTTGTGCAGATGGTAA+AGG | 0.549226 | 5_3:+56368364 | None:intergenic |
| ATCACCAGAATGTCTTTGGA+AGG | 0.550384 | 5_3:+56369072 | None:intergenic |
| ATCATTACGTTTAGTGTCGG+AGG | 0.554837 | 5_3:+56368500 | None:intergenic |
| GAAATATGTTCTCTTGATGC+GGG | 0.559456 | 5_3:+56370922 | None:intergenic |
| AGGATGACACCTCCAGTCCA+TGG | 0.559969 | 5_3:+56372441 | None:intergenic |
| AGAAGTTTCAGGAGTGTGAA+AGG | 0.560086 | 5_3:-56368790 | Msa0819660:intron |
| TGTAGACAAGAACATTTCCA+TGG | 0.561347 | 5_3:-56371550 | Msa0819660:CDS |
| GCATGTTCCTATTGATGTAG+AGG | 0.561814 | 5_3:-56371499 | Msa0819660:CDS |
| TCATTACGTTTAGTGTCGGA+GGG | 0.565562 | 5_3:+56368501 | None:intergenic |
| CATGCAAGAGAGAGAAAACT+GGG | 0.565706 | 5_3:-56370440 | Msa0819660:CDS |
| TTTGAGTCATCATCACAGTA+GGG | 0.566382 | 5_3:+56368346 | None:intergenic |
| GAATTGGATTCAACCAGGAC+GGG | 0.570273 | 5_3:-56371464 | Msa0819660:CDS |
| AGAAATATGTTCTCTTGATG+CGG | 0.570315 | 5_3:+56370921 | None:intergenic |
| ATGGTTCAGCCTTAGTTGCG+CGG | 0.575355 | 5_3:+56368120 | None:intergenic |
| TCTACGTGTTACAAGACTAA+AGG | 0.576121 | 5_3:-56370857 | Msa0819660:CDS |
| TGGTTGATATCTAACTTCTG+TGG | 0.576289 | 5_3:+56371879 | None:intergenic |
| CCAGCCTGTAAGCCTTTCGA+GGG | 0.578675 | 5_3:+56371771 | None:intergenic |
| CTTCTGGTGCAGTAATGCTA+TGG | 0.580347 | 5_3:-56369193 | Msa0819660:CDS |
| ATGGTAAACGACGGTACGGA+GGG | 0.581370 | 5_3:+56369750 | None:intergenic |
| AAATAGAACATTAAAGGACA+TGG | 0.581441 | 5_3:-56369106 | Msa0819660:CDS |
| CCTGAAAGAAGGACAAAGAG+TGG | 0.582016 | 5_3:-56369778 | Msa0819660:CDS |
| AGAACTGCATTCAACCAGAA+GGG | 0.582774 | 5_3:-56371648 | Msa0819660:CDS |
| TAAAAGAAATTGAAAATGGA+CGG | 0.583452 | 5_3:-56370558 | Msa0819660:CDS |
| GAGAATGTAAAAGTTGACTT+CGG | 0.584486 | 5_3:+56372014 | None:intergenic |
| TAGATATCAACCACAAAAGA+CGG | 0.585489 | 5_3:-56371869 | Msa0819660:CDS |
| GTGTGAAATTCGAGTGAATG+GGG | 0.586920 | 5_3:-56368045 | Msa0819660:CDS |
| TGATAGTGTCTGGGAAGCGA+TGG | 0.590031 | 5_3:-56368829 | Msa0819660:CDS |
| CATGGTAAACGACGGTACGG+AGG | 0.590266 | 5_3:+56369749 | None:intergenic |
| AAATCAACCAGGATTCTCCA+TGG | 0.591749 | 5_3:-56372458 | Msa0819660:CDS |
| CAAACGAGAAGCTGTCACCT+TGG | 0.594598 | 5_3:+56369233 | None:intergenic |
| GTCTGGTCTTGTATAGACTT+CGG | 0.594846 | 5_3:-56371912 | Msa0819660:CDS |
| GAACAGTTTGGATGAGAGCA+TGG | 0.596297 | 5_3:+56368101 | None:intergenic |
| CAGAACTGCATTCAACCAGA+AGG | 0.597524 | 5_3:-56371649 | Msa0819660:CDS |
| ACATACCTTTGAAGCAGCAT+CGG | 0.598257 | 5_3:+56372223 | None:intergenic |
| CAGTATGCCTACTCTCGAGA+AGG | 0.599788 | 5_3:-56371727 | Msa0819660:CDS |
| GATGTAGAGGACAAACAAGA+AGG | 0.602481 | 5_3:-56371486 | Msa0819660:CDS |
| GATATCATTACGTTTAGTGT+CGG | 0.603752 | 5_3:+56368497 | None:intergenic |
| TGGGAATCAGGAGTCAAATG+AGG | 0.603778 | 5_3:-56368277 | Msa0819660:CDS |
| TACGAGATAACACCCTCGAA+AGG | 0.604526 | 5_3:-56371783 | Msa0819660:CDS |
| ATATACGTTGGTTAAACCAA+CGG | 0.609330 | 5_3:+56369293 | None:intergenic |
| CAGGATTCTCCATGGACTGG+AGG | 0.609882 | 5_3:-56372450 | Msa0819660:CDS |
| CAGGAATTTGGCTCTGAATG+CGG | 0.615044 | 5_3:-56369859 | Msa0819660:CDS |
| GGAATTGGATTCAACCAGGA+CGG | 0.615506 | 5_3:-56371465 | Msa0819660:CDS |
| GATGATGAAGAGGACATACA+AGG | 0.616251 | 5_3:-56371672 | Msa0819660:CDS |
| CTACAACAAGAAAGCAGATG+TGG | 0.616680 | 5_3:-56370617 | Msa0819660:CDS |
| TATTGGTGATGATGGTGAAG+AGG | 0.619524 | 5_3:-56371598 | Msa0819660:CDS |
| GCAGGAGGAATATATGAACC+TGG | 0.625899 | 5_3:-56372075 | Msa0819660:intron |
| CAGGCTGGCCAAATATCAGT+GGG | 0.628731 | 5_3:-56371756 | Msa0819660:CDS |
| GAACTGCATTCAACCAGAAG+GGG | 0.630377 | 5_3:-56371647 | Msa0819660:CDS |
| AATAGAACATTAAAGGACAT+GGG | 0.630593 | 5_3:-56369105 | Msa0819660:CDS |
| GATGAACACACTTCAAAGAA+CGG | 0.631803 | 5_3:-56368651 | Msa0819660:CDS |
| ATCTATAAGAGAATTCAGTA+GGG | 0.634140 | 5_3:+56370076 | None:intergenic |
| ACAGGCTGGCCAAATATCAG+TGG | 0.635063 | 5_3:-56371757 | Msa0819660:CDS |
| AAAGAAATGATCATATACGT+TGG | 0.637901 | 5_3:+56369281 | None:intergenic |
| AATGCAATAAATGTGAAGGA+TGG | 0.638121 | 5_3:-56370660 | Msa0819660:CDS |
| ATAACATCCTTCTCGAGAGT+AGG | 0.639951 | 5_3:+56371720 | None:intergenic |
| GCCATGAAGTGATAGTGTCT+GGG | 0.641094 | 5_3:-56368838 | Msa0819660:CDS |
| TCTCATGGTAAACGACGGTA+CGG | 0.644785 | 5_3:+56369746 | None:intergenic |
| GTTGAATGCAATAAATGTGA+AGG | 0.651895 | 5_3:-56370664 | Msa0819660:CDS |
| CATTACGTTTAGTGTCGGAG+GGG | 0.657734 | 5_3:+56368502 | None:intergenic |
| GAGAAAGCTCTTGAAAGACA+TGG | 0.661125 | 5_3:-56371576 | Msa0819660:CDS |
| TGGAGGAATACTTGGCACGA+CGG | 0.668087 | 5_3:+56368394 | None:intergenic |
| GCTGAACTAAGAAATCAACC+AGG | 0.670704 | 5_3:-56372469 | Msa0819660:CDS |
| AGAATGATAAGCTACGCCGT+TGG | 0.671422 | 5_3:-56369493 | Msa0819660:intron |
| CAGATGGTAAAGGATCATCA+TGG | 0.676590 | 5_3:+56368374 | None:intergenic |
| AGGGAATGAGAAACTTGATG+AGG | 0.676669 | 5_3:-56370407 | Msa0819660:intron |
| AACTGCATTCAACCAGAAGG+GGG | 0.679999 | 5_3:-56371646 | Msa0819660:CDS |
| AGAAGGAATTGGATTCAACC+AGG | 0.685395 | 5_3:-56371469 | Msa0819660:CDS |
| CAGTATCTCATGGTAAACGA+CGG | 0.708055 | 5_3:+56369741 | None:intergenic |
| ATGGTAAAGGATCATCATGG+AGG | 0.738220 | 5_3:+56368377 | None:intergenic |
| TGTGAAATTCGAGTGAATGG+GGG | 0.740491 | 5_3:-56368044 | Msa0819660:CDS |
| GTTTCTGGACATCATCCCAG+AGG | 0.751856 | 5_3:-56370106 | Msa0819660:CDS |
| ACACACTTCAAAGAACGGCG+AGG | 0.771728 | 5_3:-56368646 | Msa0819660:CDS |
| AAATTCTGAAGTATTCACCG+AGG | 0.788052 | 5_3:+56371983 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAAAAATAACTTAAAC+TGG | + | chr5_3:56371298-56371317 | None:intergenic | 10.0% |
| !!! | TTTTTCTTCTTATTAAATGA+CGG | + | chr5_3:56367834-56367853 | None:intergenic | 15.0% |
| !! | AAATTAAAGATGATAAAAGA+AGG | + | chr5_3:56370858-56370877 | None:intergenic | 15.0% |
| !! | TTTATATTATTTATTTGTGC+AGG | - | chr5_3:56370879-56370898 | Msa0819660:CDS | 15.0% |
| !!! | TTTTATAATTTTGATTAGGT+TGG | - | chr5_3:56371309-56371328 | Msa0819660:CDS | 15.0% |
| !!! | TATTTGAACTAATTTTACAA+TGG | - | chr5_3:56371486-56371505 | Msa0819660:CDS | 15.0% |
| !! | ATATATTTACAAAGATTCAT+TGG | + | chr5_3:56372477-56372496 | None:intergenic | 15.0% |
| !!! | ATTTAATTTTCACAGAAATG+TGG | - | chr5_3:56367868-56367887 | Msa0819660:intron | 20.0% |
| !! | TCAACACTGAATAAAATTTA+TGG | + | chr5_3:56367942-56367961 | None:intergenic | 20.0% |
| !!! | CAATTGTTTTTCTACATATT+TGG | - | chr5_3:56368138-56368157 | Msa0819660:CDS | 20.0% |
| !! | AACAGAGAACTTATTATTAT+TGG | - | chr5_3:56368620-56368639 | Msa0819660:intron | 20.0% |
| !! | AAGCTGAATTATATAGTAAT+GGG | + | chr5_3:56369500-56369519 | None:intergenic | 20.0% |
| !! | TAAAAGAAATTGAAAATGGA+CGG | - | chr5_3:56369677-56369696 | Msa0819660:intron | 20.0% |
| !!! | AAAAGCATAAATAGAAAGAA+TGG | + | chr5_3:56370583-56370602 | None:intergenic | 20.0% |
| !! | CATTTACTCAAGTATAAAAA+TGG | + | chr5_3:56371249-56371268 | None:intergenic | 20.0% |
| !!! | AAATTATATGAAAAAGCATC+AGG | + | chr5_3:56371645-56371664 | None:intergenic | 20.0% |
| !! | ATAGAATATCAAAATTCTCT+AGG | + | chr5_3:56372327-56372346 | None:intergenic | 20.0% |
| !! | AAATATATAGAGTGCATAAT+AGG | - | chr5_3:56372489-56372508 | Msa0819660:CDS | 20.0% |
| ! | CTTGAATTTGATACTCTTAT+TGG | + | chr5_3:56368091-56368110 | None:intergenic | 25.0% |
| !!! | CTTATTATTATTGGTGATGA+TGG | - | chr5_3:56368629-56368648 | Msa0819660:CDS | 25.0% |
| ! | AGCATCATTTATTCTATTAG+AGG | + | chr5_3:56368855-56368874 | None:intergenic | 25.0% |
| ! | AGGTAATTGAAAACACTAAA+GGG | + | chr5_3:56368965-56368984 | None:intergenic | 25.0% |
| ! | AAGGTAATTGAAAACACTAA+AGG | + | chr5_3:56368966-56368985 | None:intergenic | 25.0% |
| ! | TATGCATATATCTAAATTGC+AGG | + | chr5_3:56369127-56369146 | None:intergenic | 25.0% |
| ! | CACAATGTAAACAAAAAAGT+GGG | + | chr5_3:56369290-56369309 | None:intergenic | 25.0% |
| !!! | CCTTTTTTCAAGATTTTTCT+TGG | + | chr5_3:56369436-56369455 | None:intergenic | 25.0% |
| ! | CCAAGAAAAATCTTGAAAAA+AGG | - | chr5_3:56369433-56369452 | Msa0819660:intron | 25.0% |
| ! | CAAGCTGAATTATATAGTAA+TGG | + | chr5_3:56369501-56369520 | None:intergenic | 25.0% |
| !! | CATTTTCAATTTCTTTTAGG+CGG | + | chr5_3:56369675-56369694 | None:intergenic | 25.0% |
| !! | GTCCATTTTCAATTTCTTTT+AGG | + | chr5_3:56369678-56369697 | None:intergenic | 25.0% |
| !! | GATCTTTTTCTTTACTTATG+TGG | - | chr5_3:56370008-56370027 | Msa0819660:intron | 25.0% |
| ! | ATCTATAAGAGAATTCAGTA+GGG | + | chr5_3:56370162-56370181 | None:intergenic | 25.0% |
| !!! | TTTTTTTCCTATCATCAGAT+CGG | - | chr5_3:56370600-56370619 | Msa0819660:CDS | 25.0% |
| !! | CATTTTTCTTGCAAAAATCA+AGG | + | chr5_3:56370629-56370648 | None:intergenic | 25.0% |
| !! | CTTGATTTTTGCAAGAAAAA+TGG | - | chr5_3:56370627-56370646 | Msa0819660:CDS | 25.0% |
| ! | GTATCTTTCAATGCTAAAAA+AGG | - | chr5_3:56370901-56370920 | Msa0819660:CDS | 25.0% |
| ! | AAAGAAATGATCATATACGT+TGG | + | chr5_3:56370957-56370976 | None:intergenic | 25.0% |
| ! | AGTGTCAAATAGAACATTAA+AGG | - | chr5_3:56371123-56371142 | Msa0819660:intron | 25.0% |
| ! | AAATAGAACATTAAAGGACA+TGG | - | chr5_3:56371129-56371148 | Msa0819660:intron | 25.0% |
| ! | AATAGAACATTAAAGGACAT+GGG | - | chr5_3:56371130-56371149 | Msa0819660:intron | 25.0% |
| ! | AAAATGGATGTAGAACTAAA+GGG | + | chr5_3:56371233-56371252 | None:intergenic | 25.0% |
| ! | AAAAATGGATGTAGAACTAA+AGG | + | chr5_3:56371234-56371253 | None:intergenic | 25.0% |
| !! | CTTTTGTAGGCAATATATTT+TGG | + | chr5_3:56371335-56371354 | None:intergenic | 25.0% |
| !! | TAGCATTGAATGAAACAAAA+AGG | - | chr5_3:56371511-56371530 | Msa0819660:CDS | 25.0% |
| !! | AGCATTGAATGAAACAAAAA+GGG | - | chr5_3:56371512-56371531 | Msa0819660:CDS | 25.0% |
| ! | AGAGTAGATTGTTTGAAAAT+AGG | - | chr5_3:56371768-56371787 | Msa0819660:CDS | 25.0% |
| ! | GAGTAGATTGTTTGAAAATA+GGG | - | chr5_3:56371769-56371788 | Msa0819660:CDS | 25.0% |
| GTGCTTAATTAACATCATAC+AGG | + | chr5_3:56368119-56368138 | None:intergenic | 30.0% | |
| ! | TGTTTTTCTACATATTTGGC+AGG | - | chr5_3:56368142-56368161 | Msa0819660:CDS | 30.0% |
| ! | GAGAATGTAAAAGTTGACTT+CGG | + | chr5_3:56368224-56368243 | None:intergenic | 30.0% |
| TAGATATCAACCACAAAAGA+CGG | - | chr5_3:56368366-56368385 | Msa0819660:CDS | 30.0% | |
| ATCAATAGGAACATGCATAT+CGG | + | chr5_3:56368732-56368751 | None:intergenic | 30.0% | |
| ! | TGATTCTCTTGATCAGTTTT+TGG | + | chr5_3:56368824-56368843 | None:intergenic | 30.0% |
| TAATTGAAAACACTAAAGGG+AGG | + | chr5_3:56368962-56368981 | None:intergenic | 30.0% | |
| ! | TGTTTTCAATTACCTTGATG+CGG | - | chr5_3:56368970-56368989 | Msa0819660:intron | 30.0% |
| TATAAATACAATCTGTCAGC+TGG | + | chr5_3:56369031-56369050 | None:intergenic | 30.0% | |
| TTTAACACAGATTACTTCTG+AGG | - | chr5_3:56369197-56369216 | Msa0819660:CDS | 30.0% | |
| AGTTGCCAATTATGTGAAAA+GGG | - | chr5_3:56369243-56369262 | Msa0819660:CDS | 30.0% | |
| CCACAATGTAAACAAAAAAG+TGG | + | chr5_3:56369291-56369310 | None:intergenic | 30.0% | |
| !!! | CCACTTTTTTGTTTACATTG+TGG | - | chr5_3:56369288-56369307 | Msa0819660:CDS | 30.0% |
| AGAAATATGTTCTCTTGATG+CGG | + | chr5_3:56369317-56369336 | None:intergenic | 30.0% | |
| AATGGGATCTTAAAACTTAC+CGG | + | chr5_3:56369483-56369502 | None:intergenic | 30.0% | |
| GTTGAATGCAATAAATGTGA+AGG | - | chr5_3:56369571-56369590 | Msa0819660:CDS | 30.0% | |
| AATGCAATAAATGTGAAGGA+TGG | - | chr5_3:56369575-56369594 | Msa0819660:CDS | 30.0% | |
| CGCCTAAAAGAAATTGAAAA+TGG | - | chr5_3:56369673-56369692 | Msa0819660:intron | 30.0% | |
| AAAACTGGGAAAAAGTTGAA+GGG | - | chr5_3:56369809-56369828 | Msa0819660:CDS | 30.0% | |
| CTTAAGATCAAGAAAAAGAC+AGG | + | chr5_3:56369956-56369975 | None:intergenic | 30.0% | |
| ! | TTTTTCTTTACTTATGTGGC+TGG | - | chr5_3:56370012-56370031 | Msa0819660:intron | 30.0% |
| GAAAGTAAATAAGCAGTTTC+TGG | - | chr5_3:56370114-56370133 | Msa0819660:CDS | 30.0% | |
| GATCTATAAGAGAATTCAGT+AGG | + | chr5_3:56370163-56370182 | None:intergenic | 30.0% | |
| CTTCTGTTTCAGAAAATTGA+AGG | - | chr5_3:56370322-56370341 | Msa0819660:intron | 30.0% | |
| ! | ATGTATACACAACGTTGATT+GGG | + | chr5_3:56370406-56370425 | None:intergenic | 30.0% |
| AATGTATACACAACGTTGAT+TGG | + | chr5_3:56370407-56370426 | None:intergenic | 30.0% | |
| ! | TTGATTCCGTCAAGTATTTT+AGG | - | chr5_3:56370434-56370453 | Msa0819660:CDS | 30.0% |
| AGAAAAATACCAGTATCTCA+TGG | + | chr5_3:56370507-56370526 | None:intergenic | 30.0% | |
| GCATAAATAGAAAGAATGGA+AGG | + | chr5_3:56370579-56370598 | None:intergenic | 30.0% | |
| !! | TTTCACAACTTGCTACATAT+GGG | - | chr5_3:56370650-56370669 | Msa0819660:CDS | 30.0% |
| ! | TAATCATCCCCTTTTTCTAA+AGG | + | chr5_3:56370684-56370703 | None:intergenic | 30.0% |
| ! | ATATACGTTGGTTAAACCAA+CGG | + | chr5_3:56370945-56370964 | None:intergenic | 30.0% |
| TTTCTTCCTACTACTGAAAA+AGG | - | chr5_3:56370974-56370993 | Msa0819660:CDS | 30.0% | |
| TTCTTCCTACTACTGAAAAA+GGG | - | chr5_3:56370975-56370994 | Msa0819660:CDS | 30.0% | |
| ! | ACGAAGAAGTTTTCTTTTGT+AGG | + | chr5_3:56371348-56371367 | None:intergenic | 30.0% |
| TACAAAAGAAAACTTCTTCG+TGG | - | chr5_3:56371347-56371366 | Msa0819660:CDS | 30.0% | |
| !! | TATGAAAAAGCATCAGGTTT+AGG | + | chr5_3:56371639-56371658 | None:intergenic | 30.0% |
| !!! | TTGAATTTTGTGCCATTTTC+AGG | - | chr5_3:56371694-56371713 | Msa0819660:CDS | 30.0% |
| GATATCATTACGTTTAGTGT+CGG | + | chr5_3:56371741-56371760 | None:intergenic | 30.0% | |
| !! | TTGAACAATTTTGAGTCAAC+TGG | + | chr5_3:56371922-56371941 | None:intergenic | 30.0% |
| !! | CTTGTTAAGGGTTGTCATTT+TGG | - | chr5_3:56367694-56367713 | Msa0819660:three_prime_UTR | 35.0% |
| !!! | TTAAGGGTTGTCATTTTGGT+GGG | - | chr5_3:56367698-56367717 | Msa0819660:three_prime_UTR | 35.0% |
| TGAGATATTTGCAACTATGC+TGG | - | chr5_3:56367974-56367993 | Msa0819660:intron | 35.0% | |
| ! | TTTTCTACATATTTGGCAGG+AGG | - | chr5_3:56368145-56368164 | Msa0819660:CDS | 35.0% |
| !! | AAATTCTGAAGTATTCACCG+AGG | + | chr5_3:56368255-56368274 | None:intergenic | 35.0% |
| ! | TCAGAATTTTCCACTCATGA+TGG | - | chr5_3:56368266-56368285 | Msa0819660:intron | 35.0% |
| ! | TGGTTGATATCTAACTTCTG+TGG | + | chr5_3:56368359-56368378 | None:intergenic | 35.0% |
| ! | CCAATATTTTCCGTCTTTTG+TGG | + | chr5_3:56368379-56368398 | None:intergenic | 35.0% |
| CCACAAAAGACGGAAAATAT+TGG | - | chr5_3:56368376-56368395 | Msa0819660:CDS | 35.0% | |
| GAAAATATTGGAGTCTGGTT+GGG | - | chr5_3:56368388-56368407 | Msa0819660:CDS | 35.0% | |
| ! | TGATGATGATGATGATGAAG+AGG | - | chr5_3:56368553-56368572 | Msa0819660:intron | 35.0% |
| TGTAGACAAGAACATTTCCA+TGG | - | chr5_3:56368685-56368704 | Msa0819660:intron | 35.0% | |
| CAAGAACATTTCCATGGAAA+TGG | - | chr5_3:56368691-56368710 | Msa0819660:intron | 35.0% | |
| ATTTCCATGGAAATGGACAT+TGG | - | chr5_3:56368698-56368717 | Msa0819660:intron | 35.0% | |
| TGTTTGTCCTCTACATCAAT+AGG | + | chr5_3:56368746-56368765 | None:intergenic | 35.0% | |
| !! | CATTGATTGATTCGTTCACA+TGG | - | chr5_3:56368879-56368898 | Msa0819660:CDS | 35.0% |
| ACATGTTAGTAGTCTGAGAA+AGG | - | chr5_3:56368916-56368935 | Msa0819660:intron | 35.0% | |
| TAAATAGCTTAACCGCATCA+AGG | + | chr5_3:56368985-56369004 | None:intergenic | 35.0% | |
| CAGTTGCCAATTATGTGAAA+AGG | - | chr5_3:56369242-56369261 | Msa0819660:CDS | 35.0% | |
| ! | GTCTTCCCTTTTCACATAAT+TGG | + | chr5_3:56369251-56369270 | None:intergenic | 35.0% |
| TGTAAACAAAAAAGTGGGAC+TGG | + | chr5_3:56369285-56369304 | None:intergenic | 35.0% | |
| GAAATATGTTCTCTTGATGC+GGG | + | chr5_3:56369316-56369335 | None:intergenic | 35.0% | |
| !! | AGAAGATGATTTTGATGCAC+AGG | - | chr5_3:56369344-56369363 | Msa0819660:intron | 35.0% |
| !! | GAAGATGATTTTGATGCACA+GGG | - | chr5_3:56369345-56369364 | Msa0819660:intron | 35.0% |
| TCTACGTGTTACAAGACTAA+AGG | - | chr5_3:56369378-56369397 | Msa0819660:intron | 35.0% | |
| GTGACAAAATCGCATTCAAT+GGG | - | chr5_3:56369400-56369419 | Msa0819660:intron | 35.0% | |
| ! | TGATGAAGTACTTGAAGAAC+CGG | - | chr5_3:56369461-56369480 | Msa0819660:intron | 35.0% |
| !! | ATGACTGTTGTTTCTTCTAG+TGG | - | chr5_3:56369548-56369567 | Msa0819660:CDS | 35.0% |
| !! | TGACTGTTGTTTCTTCTAGT+GGG | - | chr5_3:56369549-56369568 | Msa0819660:CDS | 35.0% |
| ! | ATTTCTTTTAGGCGGCATAA+AGG | + | chr5_3:56369667-56369686 | None:intergenic | 35.0% |
| GAAAACTGGGAAAAAGTTGA+AGG | - | chr5_3:56369808-56369827 | Msa0819660:CDS | 35.0% | |
| AAAGTTTATGTGCATGCATG+CGG | + | chr5_3:56369868-56369887 | None:intergenic | 35.0% | |
| TTGAATTGCTGCAAAATTGC+AGG | - | chr5_3:56370036-56370055 | Msa0819660:intron | 35.0% | |
| TAGATCAAGAGTAAGTTCGA+TGG | - | chr5_3:56370177-56370196 | Msa0819660:CDS | 35.0% | |
| TCTACTCTAATATGTCTCAG+AGG | - | chr5_3:56370262-56370281 | Msa0819660:intron | 35.0% | |
| GGATTTAATAGAAGTTCCCT+TGG | - | chr5_3:56370283-56370302 | Msa0819660:intron | 35.0% | |
| TTAATAGAAGTTCCCTTGGT+TGG | - | chr5_3:56370287-56370306 | Msa0819660:intron | 35.0% | |
| TATAACCTGAAACCAACCAA+GGG | + | chr5_3:56370302-56370321 | None:intergenic | 35.0% | |
| ! | GGAGTAGATGTATGCATTTT+TGG | - | chr5_3:56370343-56370362 | Msa0819660:intron | 35.0% |
| !!! | CATTTTTGGAATGTATGTCC+AGG | - | chr5_3:56370357-56370376 | Msa0819660:intron | 35.0% |
| TTCAGGCCTAAAATACTTGA+CGG | + | chr5_3:56370443-56370462 | None:intergenic | 35.0% | |
| !! | AGTATTTTAGGCCTGAAAGA+AGG | - | chr5_3:56370446-56370465 | Msa0819660:CDS | 35.0% |
| !! | GTTTCACAACTTGCTACATA+TGG | - | chr5_3:56370649-56370668 | Msa0819660:CDS | 35.0% |
| !!! | TTTGGAGTTTTTTGCTCTTC+GGG | + | chr5_3:56370723-56370742 | None:intergenic | 35.0% |
| !!! | CTTTGGAGTTTTTTGCTCTT+CGG | + | chr5_3:56370724-56370743 | None:intergenic | 35.0% |
| AAGAAAGAAAGACTGACCAA+CGG | + | chr5_3:56370761-56370780 | None:intergenic | 35.0% | |
| ! | ACCAACGGCAATATTTTCTT+CGG | + | chr5_3:56370930-56370949 | None:intergenic | 35.0% |
| GTAGAACTAAAGGGAAAAAG+TGG | + | chr5_3:56371224-56371243 | None:intergenic | 35.0% | |
| AAGTGTGTTCATCAGAACTA+TGG | + | chr5_3:56371577-56371596 | None:intergenic | 35.0% | |
| GATGAACACACTTCAAAGAA+CGG | - | chr5_3:56371584-56371603 | Msa0819660:CDS | 35.0% | |
| TTTGAGTCATCATCACAGTA+GGG | + | chr5_3:56371892-56371911 | None:intergenic | 35.0% | |
| !! | TTTTGAGTCATCATCACAGT+AGG | + | chr5_3:56371893-56371912 | None:intergenic | 35.0% |
| TTCTTGATCTGAGAACAGTT+TGG | + | chr5_3:56372149-56372168 | None:intergenic | 35.0% | |
| AAGTGTGAAATTCGAGTGAA+TGG | - | chr5_3:56372188-56372207 | Msa0819660:intron | 35.0% | |
| AGTGTGAAATTCGAGTGAAT+GGG | - | chr5_3:56372189-56372208 | Msa0819660:intron | 35.0% | |
| ACCATATCTTCTTACAATGC+TGG | + | chr5_3:56372220-56372239 | None:intergenic | 35.0% | |
| ! | TTGTCGTAGAGCTAAAGTTT+TGG | - | chr5_3:56372429-56372448 | Msa0819660:CDS | 35.0% |
| !!! | GTTAAGGGTTGTCATTTTGG+TGG | - | chr5_3:56367697-56367716 | Msa0819660:three_prime_UTR | 40.0% |
| GCTGAACTAAGAAATCAACC+AGG | - | chr5_3:56367766-56367785 | Msa0819660:exon | 40.0% | |
| AAATCAACCAGGATTCTCCA+TGG | - | chr5_3:56367777-56367796 | Msa0819660:CDS | 40.0% | |
| TGACGGTTGTATACCATTTC+AGG | + | chr5_3:56367817-56367836 | None:intergenic | 40.0% | |
| !! | ACATACCTTTGAAGCAGCAT+CGG | + | chr5_3:56368015-56368034 | None:intergenic | 40.0% |
| TACATTCTCACAATCTGCCT+CGG | - | chr5_3:56368235-56368254 | Msa0819660:intron | 40.0% | |
| CCAGACGTCAGGAAAATTAT+TGG | + | chr5_3:56368309-56368328 | None:intergenic | 40.0% | |
| ! | CCAATAATTTTCCTGACGTC+TGG | - | chr5_3:56368306-56368325 | Msa0819660:CDS | 40.0% |
| !! | GTCTGGTCTTGTATAGACTT+CGG | - | chr5_3:56368323-56368342 | Msa0819660:CDS | 40.0% |
| AGACGGAAAATATTGGAGTC+TGG | - | chr5_3:56368383-56368402 | Msa0819660:CDS | 40.0% | |
| GGAAAATATTGGAGTCTGGT+TGG | - | chr5_3:56368387-56368406 | Msa0819660:CDS | 40.0% | |
| !! | GAGGGTGTTATCTCGTAAAT+TGG | + | chr5_3:56368449-56368468 | None:intergenic | 40.0% |
| !! | TGTCGATTCCCACTGATATT+TGG | + | chr5_3:56368490-56368509 | None:intergenic | 40.0% |
| ATAACATCCTTCTCGAGAGT+AGG | + | chr5_3:56368518-56368537 | None:intergenic | 40.0% | |
| GATGATGAAGAGGACATACA+AGG | - | chr5_3:56368563-56368582 | Msa0819660:intron | 40.0% | |
| AGAACTGCATTCAACCAGAA+GGG | - | chr5_3:56368587-56368606 | Msa0819660:intron | 40.0% | |
| TGTTAGTATTTACCCCCTTC+TGG | + | chr5_3:56368604-56368623 | None:intergenic | 40.0% | |
| !! | TATTGGTGATGATGGTGAAG+AGG | - | chr5_3:56368637-56368656 | Msa0819660:CDS | 40.0% |
| GAGAAAGCTCTTGAAAGACA+TGG | - | chr5_3:56368659-56368678 | Msa0819660:CDS | 40.0% | |
| TTCTCCAATGTCCATTTCCA+TGG | + | chr5_3:56368705-56368724 | None:intergenic | 40.0% | |
| GCATGTTCCTATTGATGTAG+AGG | - | chr5_3:56368736-56368755 | Msa0819660:intron | 40.0% | |
| GATGTAGAGGACAAACAAGA+AGG | - | chr5_3:56368749-56368768 | Msa0819660:intron | 40.0% | |
| GAGGACAAACAAGAAGGAAT+TGG | - | chr5_3:56368755-56368774 | Msa0819660:intron | 40.0% | |
| AGAAGGAATTGGATTCAACC+AGG | - | chr5_3:56368766-56368785 | Msa0819660:intron | 40.0% | |
| TCTGAGAAAGGAATCTGTTC+AGG | - | chr5_3:56368928-56368947 | Msa0819660:intron | 40.0% | |
| GATGCGGTTAAGCTATTTAG+AGG | - | chr5_3:56368986-56369005 | Msa0819660:intron | 40.0% | |
| GGTGACAAAATCGCATTCAA+TGG | - | chr5_3:56369399-56369418 | Msa0819660:intron | 40.0% | |
| CTACAACAAGAAAGCAGATG+TGG | - | chr5_3:56369618-56369637 | Msa0819660:CDS | 40.0% | |
| AAGTTAGCTGCCTTTGGTAA+GGG | + | chr5_3:56369709-56369728 | None:intergenic | 40.0% | |
| AAAGTTAGCTGCCTTTGGTA+AGG | + | chr5_3:56369710-56369729 | None:intergenic | 40.0% | |
| TTACCAAAGGCAGCTAACTT+TGG | - | chr5_3:56369709-56369728 | Msa0819660:intron | 40.0% | |
| ! | CGAAAAGTCTTTTCTCCAAG+TGG | + | chr5_3:56369768-56369787 | None:intergenic | 40.0% |
| TCATGCAAGAGAGAGAAAAC+TGG | - | chr5_3:56369794-56369813 | Msa0819660:CDS | 40.0% | |
| CATGCAAGAGAGAGAAAACT+GGG | - | chr5_3:56369795-56369814 | Msa0819660:CDS | 40.0% | |
| AGGGAATGAGAAACTTGATG+AGG | - | chr5_3:56369828-56369847 | Msa0819660:CDS | 40.0% | |
| GTATAACCTGAAACCAACCA+AGG | + | chr5_3:56370303-56370322 | None:intergenic | 40.0% | |
| GGAATGTATGTCCAGGAATT+TGG | - | chr5_3:56370364-56370383 | Msa0819660:intron | 40.0% | |
| CAGTATCTCATGGTAAACGA+CGG | + | chr5_3:56370497-56370516 | None:intergenic | 40.0% | |
| ! | AAGGTATCCGATCTGATGAT+AGG | + | chr5_3:56370610-56370629 | None:intergenic | 40.0% |
| ! | CCTGTGCTCCTTTAGAAAAA+GGG | - | chr5_3:56370673-56370692 | Msa0819660:intron | 40.0% |
| ! | CTGTGCTCCTTTAGAAAAAG+GGG | - | chr5_3:56370674-56370693 | Msa0819660:intron | 40.0% |
| ACCGAAGAAAATATTGCCGT+TGG | - | chr5_3:56370926-56370945 | Msa0819660:CDS | 40.0% | |
| !!! | GAGTTCCCTTTTTCAGTAGT+AGG | + | chr5_3:56370983-56371002 | None:intergenic | 40.0% |
| TACTGAAAAAGGGAACTCCA+AGG | - | chr5_3:56370985-56371004 | Msa0819660:CDS | 40.0% | |
| TCTCGTTTGCCATACTTTGA+TGG | - | chr5_3:56371016-56371035 | Msa0819660:CDS | 40.0% | |
| CAGAAGTCTCCATCAAAGTA+TGG | + | chr5_3:56371028-56371047 | None:intergenic | 40.0% | |
| CATACTTTGATGGAGACTTC+TGG | - | chr5_3:56371026-56371045 | Msa0819660:CDS | 40.0% | |
| !!! | TCCTCTACTCTCTTTTTCGA+GGG | + | chr5_3:56371080-56371099 | None:intergenic | 40.0% |
| !! | TTCCTCTACTCTCTTTTTCG+AGG | + | chr5_3:56371081-56371100 | None:intergenic | 40.0% |
| ATCACCAGAATGTCTTTGGA+AGG | + | chr5_3:56371166-56371185 | None:intergenic | 40.0% | |
| TTGCATCACCAGAATGTCTT+TGG | + | chr5_3:56371170-56371189 | None:intergenic | 40.0% | |
| CACTGAATGCAAGAAGTTTC+AGG | - | chr5_3:56371434-56371453 | Msa0819660:CDS | 40.0% | |
| ! | AGAAGTTTCAGGAGTGTGAA+AGG | - | chr5_3:56371445-56371464 | Msa0819660:CDS | 40.0% |
| CATCAACAGAAGCCTGAAAA+TGG | + | chr5_3:56371709-56371728 | None:intergenic | 40.0% | |
| ! | TCATTACGTTTAGTGTCGGA+GGG | + | chr5_3:56371737-56371756 | None:intergenic | 40.0% |
| ! | ATCATTACGTTTAGTGTCGG+AGG | + | chr5_3:56371738-56371757 | None:intergenic | 40.0% |
| CAAACTGAAACTGAGACTTC+TGG | + | chr5_3:56371814-56371833 | None:intergenic | 40.0% | |
| GATCATCATGGAGGAATACT+TGG | + | chr5_3:56371852-56371871 | None:intergenic | 40.0% | |
| ATGGTAAAGGATCATCATGG+AGG | + | chr5_3:56371861-56371880 | None:intergenic | 40.0% | |
| CAGATGGTAAAGGATCATCA+TGG | + | chr5_3:56371864-56371883 | None:intergenic | 40.0% | |
| TCAACACCAGTATGTCAATC+TGG | - | chr5_3:56371938-56371957 | Msa0819660:CDS | 40.0% | |
| CAACACCAGTATGTCAATCT+GGG | - | chr5_3:56371939-56371958 | Msa0819660:CDS | 40.0% | |
| TGATTCCCAGATTGACATAC+TGG | + | chr5_3:56371947-56371966 | None:intergenic | 40.0% | |
| AGTATGTCAATCTGGGAATC+AGG | - | chr5_3:56371946-56371965 | Msa0819660:CDS | 40.0% | |
| TCAGGAGTCAAATGAGGAAA+TGG | - | chr5_3:56371964-56371983 | Msa0819660:CDS | 40.0% | |
| CACTCGAATTTCACACTTAC+TGG | + | chr5_3:56372186-56372205 | None:intergenic | 40.0% | |
| GTGTGAAATTCGAGTGAATG+GGG | - | chr5_3:56372190-56372209 | Msa0819660:intron | 40.0% | |
| TGTGAAATTCGAGTGAATGG+GGG | - | chr5_3:56372191-56372210 | Msa0819660:intron | 40.0% | |
| GCCAGCATTGTAAGAAGATA+TGG | - | chr5_3:56372216-56372235 | Msa0819660:intron | 40.0% | |
| CTCCAGAAATTGCAAAGACT+CGG | - | chr5_3:56372256-56372275 | Msa0819660:CDS | 40.0% | |
| TTCCGAGTCTTTGCAATTTC+TGG | + | chr5_3:56372261-56372280 | None:intergenic | 40.0% | |
| !!! | GCTAAAGTTTTGGAAAGCGA+CGG | - | chr5_3:56372439-56372458 | Msa0819660:CDS | 40.0% |
| ! | ACTTACCGATGCTGCTTCAA+AGG | - | chr5_3:56368007-56368026 | Msa0819660:intron | 45.0% |
| GCAGGAGGAATATATGAACC+TGG | - | chr5_3:56368160-56368179 | Msa0819660:CDS | 45.0% | |
| ATGAACCTGGAGACGTTGAA+TGG | - | chr5_3:56368173-56368192 | Msa0819660:intron | 45.0% | |
| TGAACCTGGAGACGTTGAAT+GGG | - | chr5_3:56368174-56368193 | Msa0819660:intron | 45.0% | |
| TTCAGTGTTGCCATCATGAG+TGG | + | chr5_3:56368279-56368298 | None:intergenic | 45.0% | |
| TCTATACAAGACCAGACGTC+AGG | + | chr5_3:56368320-56368339 | None:intergenic | 45.0% | |
| TACGAGATAACACCCTCGAA+AGG | - | chr5_3:56368452-56368471 | Msa0819660:CDS | 45.0% | |
| CAGAACTGCATTCAACCAGA+AGG | - | chr5_3:56368586-56368605 | Msa0819660:intron | 45.0% | |
| GAACTGCATTCAACCAGAAG+GGG | - | chr5_3:56368588-56368607 | Msa0819660:intron | 45.0% | |
| AACTGCATTCAACCAGAAGG+GGG | - | chr5_3:56368589-56368608 | Msa0819660:intron | 45.0% | |
| GGAATTGGATTCAACCAGGA+CGG | - | chr5_3:56368770-56368789 | Msa0819660:intron | 45.0% | |
| GAATTGGATTCAACCAGGAC+GGG | - | chr5_3:56368771-56368790 | Msa0819660:intron | 45.0% | |
| AACTGTGCTAAGTGACCACT+TGG | - | chr5_3:56369750-56369769 | Msa0819660:CDS | 45.0% | |
| CAGTAGGGTAATTCTCCTCT+GGG | + | chr5_3:56370147-56370166 | None:intergenic | 45.0% | |
| TCAGTAGGGTAATTCTCCTC+TGG | + | chr5_3:56370148-56370167 | None:intergenic | 45.0% | |
| !! | AAGTTCCCTTGGTTGGTTTC+AGG | - | chr5_3:56370294-56370313 | Msa0819660:intron | 45.0% |
| !! | CAGGAATTTGGCTCTGAATG+CGG | - | chr5_3:56370376-56370395 | Msa0819660:intron | 45.0% |
| CCACTCTTTGTCCTTCTTTC+AGG | + | chr5_3:56370460-56370479 | None:intergenic | 45.0% | |
| CCTGAAAGAAGGACAAAGAG+TGG | - | chr5_3:56370457-56370476 | Msa0819660:CDS | 45.0% | |
| TCTCATGGTAAACGACGGTA+CGG | + | chr5_3:56370492-56370511 | None:intergenic | 45.0% | |
| CGTCGTTTACCATGAGATAC+TGG | - | chr5_3:56370495-56370514 | Msa0819660:CDS | 45.0% | |
| ! | GCCTGTGCTCCTTTAGAAAA+AGG | - | chr5_3:56370672-56370691 | Msa0819660:intron | 45.0% |
| !! | CCCTTTTTCTAAAGGAGCAC+AGG | + | chr5_3:56370676-56370695 | None:intergenic | 45.0% |
| !!! | GAGTTTTTTGCTCTTCGGGA+TGG | + | chr5_3:56370719-56370738 | None:intergenic | 45.0% |
| CGGCGTAGCTTATCATTCTT+TGG | + | chr5_3:56370741-56370760 | None:intergenic | 45.0% | |
| AGAATGATAAGCTACGCCGT+TGG | - | chr5_3:56370742-56370761 | Msa0819660:intron | 45.0% | |
| CTTCTGGTGCAGTAATGCTA+TGG | - | chr5_3:56371042-56371061 | Msa0819660:intron | 45.0% | |
| !!! | ACTCTCTTTTTCGAGGGTCT+TGG | + | chr5_3:56371074-56371093 | None:intergenic | 45.0% |
| ACCCTCGAAAAAGAGAGTAG+AGG | - | chr5_3:56371076-56371095 | Msa0819660:intron | 45.0% | |
| ! | CAGAATGTCTTTGGAAGGCT+TGG | + | chr5_3:56371161-56371180 | None:intergenic | 45.0% |
| CAAGCCTTCCAAAGACATTC+TGG | - | chr5_3:56371159-56371178 | Msa0819660:intron | 45.0% | |
| ! | TGCCATGAAGTGATAGTGTC+TGG | - | chr5_3:56371396-56371415 | Msa0819660:CDS | 45.0% |
| ! | GCCATGAAGTGATAGTGTCT+GGG | - | chr5_3:56371397-56371416 | Msa0819660:CDS | 45.0% |
| TCCCAGACACTATCACTTCA+TGG | + | chr5_3:56371401-56371420 | None:intergenic | 45.0% | |
| ! | CATTACGTTTAGTGTCGGAG+GGG | + | chr5_3:56371736-56371755 | None:intergenic | 45.0% |
| TAGGGTTGTGCAGATGGTAA+AGG | + | chr5_3:56371874-56371893 | None:intergenic | 45.0% | |
| TGGGAATCAGGAGTCAAATG+AGG | - | chr5_3:56371958-56371977 | Msa0819660:CDS | 45.0% | |
| GAACAGTTTGGATGAGAGCA+TGG | + | chr5_3:56372137-56372156 | None:intergenic | 45.0% | |
| TCGGAATGTAGAATACCACG+TGG | - | chr5_3:56372275-56372294 | Msa0819660:CDS | 45.0% | |
| TCTAATTGCAACACACCACG+TGG | + | chr5_3:56372293-56372312 | None:intergenic | 45.0% | |
| !!! | TTATTTTTATAATTTTGATT+AGG | - | chr5_3:56371305-56371324 | Msa0819660:intron | 5.0% |
| AACCAGGATTCTCCATGGAC+TGG | - | chr5_3:56367782-56367801 | Msa0819660:CDS | 50.0% | |
| !! | CTGGAGGTGTCATCCTGAAA+TGG | - | chr5_3:56367801-56367820 | Msa0819660:CDS | 50.0% |
| AACACCCTCGAAAGGCTTAC+AGG | - | chr5_3:56368460-56368479 | Msa0819660:CDS | 50.0% | |
| ! | ACAGGCTGGCCAAATATCAG+TGG | - | chr5_3:56368478-56368497 | Msa0819660:CDS | 50.0% |
| ! | CAGGCTGGCCAAATATCAGT+GGG | - | chr5_3:56368479-56368498 | Msa0819660:CDS | 50.0% |
| CAGTATGCCTACTCTCGAGA+AGG | - | chr5_3:56368508-56368527 | Msa0819660:CDS | 50.0% | |
| ! | ACGGCCTTTTCCCTTACCAA+AGG | - | chr5_3:56369696-56369715 | Msa0819660:intron | 50.0% |
| GCTGCCTTTGGTAAGGGAAA+AGG | + | chr5_3:56369703-56369722 | None:intergenic | 50.0% | |
| GCACCAAAGTTAGCTGCCTT+TGG | + | chr5_3:56369715-56369734 | None:intergenic | 50.0% | |
| !! | GGCAGCTAACTTTGGTGCTA+AGG | - | chr5_3:56369717-56369736 | Msa0819660:intron | 50.0% |
| GTGCATGCATGCGGATTTCT+TGG | + | chr5_3:56369859-56369878 | None:intergenic | 50.0% | |
| ! | GTTTCTGGACATCATCCCAG+AGG | - | chr5_3:56370129-56370148 | Msa0819660:CDS | 50.0% |
| CGCATTCAGAGCCAAATTCC+TGG | + | chr5_3:56370378-56370397 | None:intergenic | 50.0% | |
| ATGGTAAACGACGGTACGGA+GGG | + | chr5_3:56370488-56370507 | None:intergenic | 50.0% | |
| CAAACGAGAAGCTGTCACCT+TGG | + | chr5_3:56371005-56371024 | None:intergenic | 50.0% | |
| ! | TGATAGTGTCTGGGAAGCGA+TGG | - | chr5_3:56371406-56371425 | Msa0819660:CDS | 50.0% |
| ACACACTTCAAAGAACGGCG+AGG | - | chr5_3:56371589-56371608 | Msa0819660:CDS | 50.0% | |
| CGAGGTGCATACACTTTGTC+AGG | - | chr5_3:56371607-56371626 | Msa0819660:CDS | 50.0% | |
| TGGAGGAATACTTGGCACGA+CGG | + | chr5_3:56371844-56371863 | None:intergenic | 50.0% | |
| TCACAGTAGGGTTGTGCAGA+TGG | + | chr5_3:56371880-56371899 | None:intergenic | 50.0% | |
| ATCTCAATGCCGCGCAACTA+AGG | - | chr5_3:56372106-56372125 | Msa0819660:intron | 50.0% | |
| ATGGTTCAGCCTTAGTTGCG+CGG | + | chr5_3:56372118-56372137 | None:intergenic | 50.0% | |
| CTCCAGTCCATGGAGAATCC+TGG | + | chr5_3:56367787-56367806 | None:intergenic | 55.0% | |
| !! | CAGGATTCTCCATGGACTGG+AGG | - | chr5_3:56367785-56367804 | Msa0819660:CDS | 55.0% |
| AGGATGACACCTCCAGTCCA+TGG | + | chr5_3:56367797-56367816 | None:intergenic | 55.0% | |
| TGGGCGTGTGCAAGCTCTAT+TGG | - | chr5_3:56368193-56368212 | Msa0819660:intron | 55.0% | |
| GGGCGTGTGCAAGCTCTATT+GGG | - | chr5_3:56368194-56368213 | Msa0819660:intron | 55.0% | |
| CCAGCCTGTAAGCCTTTCGA+GGG | + | chr5_3:56368467-56368486 | None:intergenic | 55.0% | |
| TTTGAGCATCTGTCCCGTCC+TGG | + | chr5_3:56368787-56368806 | None:intergenic | 55.0% | |
| GGACGGGACAGATGCTCAAA+AGG | - | chr5_3:56368787-56368806 | Msa0819660:intron | 55.0% | |
| CATGGTAAACGACGGTACGG+AGG | + | chr5_3:56370489-56370508 | None:intergenic | 55.0% | |
| GAAAGCGACGGAGCAGTCAA+TGG | - | chr5_3:56372451-56372470 | Msa0819660:CDS | 55.0% | |
| CACGCCCATTCAACGTCTCC+AGG | + | chr5_3:56368181-56368200 | None:intergenic | 60.0% | |
| CCCTCGAAAGGCTTACAGGC+TGG | - | chr5_3:56368464-56368483 | Msa0819660:CDS | 60.0% | |
| GCCAGCCTGTAAGCCTTTCG+AGG | + | chr5_3:56368468-56368487 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 56367691 | 56372566 | 56367691 | ID=Msa0819660;Name=Msa0819660 |
| chr5_3 | mRNA | 56367691 | 56372566 | 56367691 | ID=Msa0819660-mRNA-1;Parent=Msa0819660;Name=Msa0819660-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.30|0.21|1|1|1|14|86|1025 |
| chr5_3 | exon | 56367691 | 56367873 | 56367691 | ID=Msa0819660-mRNA-1:exon:17033;Parent=Msa0819660-mRNA-1 |
| chr5_3 | exon | 56368020 | 56368183 | 56368020 | ID=Msa0819660-mRNA-1:exon:17032;Parent=Msa0819660-mRNA-1 |
| chr5_3 | exon | 56368272 | 56368541 | 56368272 | ID=Msa0819660-mRNA-1:exon:17031;Parent=Msa0819660-mRNA-1 |
| chr5_3 | exon | 56368629 | 56368686 | 56368629 | ID=Msa0819660-mRNA-1:exon:17030;Parent=Msa0819660-mRNA-1 |
| chr5_3 | exon | 56368791 | 56368930 | 56368791 | ID=Msa0819660-mRNA-1:exon:17029;Parent=Msa0819660-mRNA-1 |
| chr5_3 | exon | 56369065 | 56369356 | 56369065 | ID=Msa0819660-mRNA-1:exon:17028;Parent=Msa0819660-mRNA-1 |
| chr5_3 | exon | 56369494 | 56369639 | 56369494 | ID=Msa0819660-mRNA-1:exon:17027;Parent=Msa0819660-mRNA-1 |
| chr5_3 | exon | 56369741 | 56369941 | 56369741 | ID=Msa0819660-mRNA-1:exon:17026;Parent=Msa0819660-mRNA-1 |
| chr5_3 | exon | 56370071 | 56370199 | 56370071 | ID=Msa0819660-mRNA-1:exon:17025;Parent=Msa0819660-mRNA-1 |
| chr5_3 | exon | 56370408 | 56370689 | 56370408 | ID=Msa0819660-mRNA-1:exon:17024;Parent=Msa0819660-mRNA-1 |
| chr5_3 | exon | 56370775 | 56371050 | 56370775 | ID=Msa0819660-mRNA-1:exon:17023;Parent=Msa0819660-mRNA-1 |
| chr5_3 | exon | 56371308 | 56372093 | 56371308 | ID=Msa0819660-mRNA-1:exon:17022;Parent=Msa0819660-mRNA-1 |
| chr5_3 | exon | 56372229 | 56372301 | 56372229 | ID=Msa0819660-mRNA-1:exon:17021;Parent=Msa0819660-mRNA-1 |
| chr5_3 | exon | 56372403 | 56372566 | 56372403 | ID=Msa0819660-mRNA-1:exon:17020;Parent=Msa0819660-mRNA-1 |
| chr5_3 | CDS | 56372403 | 56372566 | 56372403 | ID=Msa0819660-mRNA-1:cds;Parent=Msa0819660-mRNA-1 |
| chr5_3 | CDS | 56372229 | 56372301 | 56372229 | ID=Msa0819660-mRNA-1:cds;Parent=Msa0819660-mRNA-1 |
| chr5_3 | CDS | 56371308 | 56372093 | 56371308 | ID=Msa0819660-mRNA-1:cds;Parent=Msa0819660-mRNA-1 |
| chr5_3 | CDS | 56370775 | 56371050 | 56370775 | ID=Msa0819660-mRNA-1:cds;Parent=Msa0819660-mRNA-1 |
| chr5_3 | CDS | 56370408 | 56370689 | 56370408 | ID=Msa0819660-mRNA-1:cds;Parent=Msa0819660-mRNA-1 |
| chr5_3 | CDS | 56370071 | 56370199 | 56370071 | ID=Msa0819660-mRNA-1:cds;Parent=Msa0819660-mRNA-1 |
| chr5_3 | CDS | 56369741 | 56369941 | 56369741 | ID=Msa0819660-mRNA-1:cds;Parent=Msa0819660-mRNA-1 |
| chr5_3 | CDS | 56369494 | 56369639 | 56369494 | ID=Msa0819660-mRNA-1:cds;Parent=Msa0819660-mRNA-1 |
| chr5_3 | CDS | 56369065 | 56369356 | 56369065 | ID=Msa0819660-mRNA-1:cds;Parent=Msa0819660-mRNA-1 |
| chr5_3 | CDS | 56368791 | 56368930 | 56368791 | ID=Msa0819660-mRNA-1:cds;Parent=Msa0819660-mRNA-1 |
| chr5_3 | CDS | 56368629 | 56368686 | 56368629 | ID=Msa0819660-mRNA-1:cds;Parent=Msa0819660-mRNA-1 |
| chr5_3 | CDS | 56368272 | 56368541 | 56368272 | ID=Msa0819660-mRNA-1:cds;Parent=Msa0819660-mRNA-1 |
| chr5_3 | CDS | 56368020 | 56368183 | 56368020 | ID=Msa0819660-mRNA-1:cds;Parent=Msa0819660-mRNA-1 |
| chr5_3 | CDS | 56367777 | 56367873 | 56367777 | ID=Msa0819660-mRNA-1:cds;Parent=Msa0819660-mRNA-1 |
| chr5_3 | three_prime_UTR | 56367691 | 56367776 | 56367691 | ID=Msa0819660-mRNA-1:three_prime_utr;Parent=Msa0819660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
