Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820710 | XP_024639128.2 | 78.156 | 499 | 45 | 6 | 1 | 473 | 1 | 461 | 0.0 | 718 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820710 | sp|Q8S9H7|DIV_ANTMA | 63.014 | 73 | 23 | 2 | 283 | 354 | 134 | 203 | 1.02e-21 | 98.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820710 | G7K310 | 78.156 | 499 | 45 | 6 | 1 | 473 | 1 | 461 | 0.0 | 718 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0820710 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820710 | MtrunA17_Chr5g0440741 | 89.606 | 279 | 24 | 2 | 196 | 473 | 15 | 289 | 2.67e-170 | 480 |
| Msa0820710 | MtrunA17_Chr5g0440731 | 88.380 | 284 | 23 | 4 | 196 | 473 | 15 | 294 | 3.11e-166 | 470 |
| Msa0820710 | MtrunA17_Chr5g0440821 | 80.905 | 199 | 25 | 4 | 9 | 195 | 23 | 220 | 4.68e-97 | 312 |
| Msa0820710 | MtrunA17_Chr5g0409841 | 65.532 | 235 | 66 | 7 | 198 | 421 | 1 | 231 | 1.38e-85 | 262 |
| Msa0820710 | MtrunA17_Chr5g0440751 | 71.939 | 196 | 20 | 3 | 1 | 195 | 1 | 162 | 1.32e-82 | 253 |
| Msa0820710 | MtrunA17_Chr5g0440721 | 64.062 | 192 | 21 | 3 | 5 | 195 | 12 | 156 | 7.09e-70 | 219 |
| Msa0820710 | MtrunA17_Chr5g0409831 | 49.141 | 291 | 71 | 9 | 198 | 473 | 1 | 229 | 3.40e-61 | 199 |
| Msa0820710 | MtrunA17_Chr5g0409951 | 62.147 | 177 | 33 | 3 | 3 | 170 | 99 | 250 | 8.03e-59 | 194 |
| Msa0820710 | MtrunA17_Chr5g0409951 | 56.701 | 97 | 28 | 3 | 196 | 286 | 22 | 110 | 2.81e-20 | 90.1 |
| Msa0820710 | MtrunA17_Chr5g0429521 | 58.228 | 79 | 29 | 2 | 283 | 360 | 134 | 209 | 2.97e-22 | 97.1 |
| Msa0820710 | MtrunA17_Chr1g0162081 | 57.692 | 78 | 28 | 3 | 279 | 354 | 119 | 193 | 3.08e-22 | 96.7 |
| Msa0820710 | MtrunA17_Chr3g0104071 | 64.286 | 70 | 21 | 2 | 283 | 351 | 149 | 215 | 5.19e-22 | 96.7 |
| Msa0820710 | MtrunA17_Chr5g0436501 | 56.790 | 81 | 33 | 2 | 270 | 349 | 113 | 192 | 3.17e-21 | 93.2 |
| Msa0820710 | MtrunA17_Chr1g0210471 | 62.687 | 67 | 22 | 1 | 283 | 349 | 126 | 189 | 3.34e-21 | 92.4 |
| Msa0820710 | MtrunA17_Chr4g0062741 | 42.735 | 117 | 57 | 5 | 279 | 393 | 135 | 243 | 1.16e-20 | 92.4 |
| Msa0820710 | MtrunA17_Chr7g0241761 | 52.809 | 89 | 30 | 2 | 283 | 371 | 142 | 218 | 1.60e-20 | 92.0 |
| Msa0820710 | MtrunA17_Chr8g0365011 | 45.283 | 106 | 45 | 2 | 263 | 356 | 74 | 178 | 3.08e-19 | 87.8 |
| Msa0820710 | MtrunA17_Chr5g0432921 | 42.241 | 116 | 64 | 2 | 238 | 353 | 72 | 184 | 1.22e-18 | 84.7 |
| Msa0820710 | MtrunA17_Chr3g0135671 | 48.571 | 70 | 36 | 0 | 283 | 352 | 93 | 162 | 1.56e-18 | 84.7 |
| Msa0820710 | MtrunA17_Chr8g0364731 | 55.224 | 67 | 29 | 1 | 290 | 356 | 10 | 75 | 4.78e-18 | 82.0 |
| Msa0820710 | MtrunA17_Chr2g0331031 | 53.846 | 65 | 27 | 1 | 283 | 347 | 111 | 172 | 8.38e-18 | 84.7 |
| Msa0820710 | MtrunA17_Chr4g0055931 | 51.515 | 66 | 27 | 2 | 283 | 347 | 97 | 158 | 7.83e-17 | 81.6 |
| Msa0820710 | MtrunA17_Chr8g0389241 | 65.217 | 46 | 16 | 0 | 283 | 328 | 107 | 152 | 4.26e-16 | 78.6 |
| Msa0820710 | MtrunA17_Chr6g0488471 | 52.308 | 65 | 28 | 1 | 283 | 347 | 99 | 160 | 4.34e-16 | 78.6 |
| Msa0820710 | MtrunA17_Chr5g0415191 | 67.391 | 46 | 15 | 0 | 283 | 328 | 104 | 149 | 5.30e-16 | 79.0 |
| Msa0820710 | MtrunA17_Chr4g0059701 | 68.889 | 45 | 14 | 0 | 283 | 327 | 86 | 130 | 5.70e-16 | 78.2 |
| Msa0820710 | MtrunA17_Chr5g0432941 | 39.200 | 125 | 54 | 3 | 238 | 353 | 73 | 184 | 8.68e-16 | 76.6 |
| Msa0820710 | MtrunA17_Chr1g0192061 | 39.683 | 126 | 55 | 7 | 249 | 356 | 13 | 135 | 2.84e-15 | 73.9 |
| Msa0820710 | MtrunA17_Chr6g0452791 | 54.545 | 55 | 25 | 0 | 283 | 337 | 82 | 136 | 5.75e-15 | 72.8 |
| Msa0820710 | MtrunA17_Chr3g0092621 | 42.857 | 70 | 37 | 1 | 283 | 352 | 86 | 152 | 3.87e-14 | 70.5 |
| Msa0820710 | MtrunA17_Chr5g0409941 | 73.469 | 49 | 10 | 1 | 7 | 52 | 31 | 79 | 7.05e-14 | 67.8 |
| Msa0820710 | MtrunA17_Chr5g0409941 | 81.818 | 33 | 6 | 0 | 125 | 157 | 74 | 106 | 2.96e-11 | 60.5 |
| Msa0820710 | MtrunA17_Chr3g0113121 | 46.667 | 90 | 40 | 3 | 282 | 363 | 96 | 185 | 1.51e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820710 | AT5G58900.1 | 41.176 | 136 | 64 | 3 | 283 | 413 | 143 | 267 | 1.59e-23 | 100 |
| Msa0820710 | AT5G08520.1 | 56.790 | 81 | 31 | 2 | 279 | 358 | 115 | 192 | 1.36e-22 | 98.2 |
| Msa0820710 | AT5G04760.1 | 60.526 | 76 | 27 | 1 | 274 | 349 | 92 | 164 | 1.81e-22 | 95.9 |
| Msa0820710 | AT5G01200.1 | 61.429 | 70 | 23 | 2 | 283 | 351 | 148 | 214 | 3.39e-21 | 93.6 |
| Msa0820710 | AT2G38090.1 | 57.692 | 78 | 28 | 3 | 276 | 351 | 135 | 209 | 1.15e-20 | 92.8 |
| Msa0820710 | AT1G49010.1 | 53.659 | 82 | 33 | 3 | 279 | 358 | 131 | 209 | 3.43e-20 | 91.7 |
| Msa0820710 | AT5G61620.1 | 54.545 | 77 | 31 | 2 | 275 | 350 | 101 | 174 | 5.56e-19 | 88.2 |
| Msa0820710 | AT3G11280.2 | 42.500 | 120 | 54 | 4 | 283 | 393 | 129 | 242 | 1.19e-18 | 86.3 |
| Msa0820710 | AT3G11280.1 | 42.500 | 120 | 54 | 4 | 283 | 393 | 129 | 242 | 1.19e-18 | 86.3 |
| Msa0820710 | AT5G23650.1 | 52.632 | 76 | 33 | 1 | 283 | 358 | 122 | 194 | 2.72e-18 | 86.3 |
| Msa0820710 | AT3G10580.2 | 44.444 | 99 | 42 | 3 | 270 | 361 | 77 | 169 | 1.38e-17 | 82.8 |
| Msa0820710 | AT5G05790.2 | 55.000 | 80 | 28 | 3 | 279 | 353 | 128 | 204 | 1.52e-17 | 83.2 |
| Msa0820710 | AT5G05790.1 | 55.000 | 80 | 28 | 3 | 279 | 353 | 128 | 204 | 1.52e-17 | 83.2 |
| Msa0820710 | AT3G10580.1 | 44.444 | 99 | 42 | 3 | 270 | 361 | 77 | 169 | 1.78e-17 | 83.2 |
| Msa0820710 | AT5G47390.1 | 46.591 | 88 | 41 | 3 | 283 | 368 | 98 | 181 | 2.71e-17 | 83.6 |
| Msa0820710 | AT1G70000.1 | 67.391 | 46 | 15 | 0 | 283 | 328 | 100 | 145 | 1.65e-16 | 79.7 |
| Msa0820710 | AT1G70000.2 | 67.391 | 46 | 15 | 0 | 283 | 328 | 100 | 145 | 1.65e-16 | 79.7 |
| Msa0820710 | AT5G56840.1 | 55.172 | 58 | 26 | 0 | 283 | 340 | 93 | 150 | 2.03e-16 | 79.0 |
| Msa0820710 | AT4G09450.1 | 54.412 | 68 | 28 | 1 | 283 | 350 | 93 | 157 | 3.52e-16 | 77.4 |
| Msa0820710 | AT3G16350.1 | 65.217 | 46 | 16 | 0 | 283 | 328 | 139 | 184 | 1.11e-15 | 79.0 |
| Msa0820710 | AT1G74840.2 | 68.889 | 45 | 14 | 0 | 283 | 327 | 98 | 142 | 1.51e-15 | 76.6 |
| Msa0820710 | AT1G74840.1 | 68.889 | 45 | 14 | 0 | 283 | 327 | 98 | 142 | 2.20e-15 | 76.6 |
| Msa0820710 | AT1G19000.2 | 68.889 | 45 | 14 | 0 | 283 | 327 | 104 | 148 | 2.40e-15 | 76.6 |
| Msa0820710 | AT1G19000.1 | 68.889 | 45 | 14 | 0 | 283 | 327 | 104 | 148 | 2.40e-15 | 76.6 |
| Msa0820710 | AT3G10590.1 | 50.000 | 68 | 30 | 2 | 283 | 350 | 113 | 176 | 1.66e-12 | 67.0 |
Find 118 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCCATATCTTTCACATTT+TGG | 0.099316 | 5_3:-58220888 | None:intergenic |
| TCAACATGATTCATAGGTTT+TGG | 0.219569 | 5_3:-58218896 | None:intergenic |
| CTGTCCAATGCCCTTTCCTT+GGG | 0.257949 | 5_3:-58220515 | None:intergenic |
| CTTGGGGCATGACTTTCTTC+TGG | 0.281577 | 5_3:-58220498 | None:intergenic |
| TCCTAGAGCTCCTTCTGTTC+AGG | 0.288148 | 5_3:+58218952 | Msa0820710:CDS |
| CCTGCTGCAGCCGGGGATAC+AGG | 0.292706 | 5_3:-58219599 | None:intergenic |
| TTCTCAAGTTTGTTCATATC+AGG | 0.295923 | 5_3:-58221270 | None:intergenic |
| TCTGTCCAATGCCCTTTCCT+TGG | 0.314383 | 5_3:-58220516 | None:intergenic |
| TATGCTTTCCCACCTGGTTC+AGG | 0.329227 | 5_3:+58219548 | Msa0820710:CDS |
| CCATTTGTGTTGTTGCGCTT+GGG | 0.329671 | 5_3:-58219422 | None:intergenic |
| CACTGCCATCTTAAACAAAA+AGG | 0.338459 | 5_3:+58221191 | Msa0820710:CDS |
| TGGATATTTGGCCTTCCATT+TGG | 0.341904 | 5_3:-58219713 | None:intergenic |
| CCACCAAAATGTGAAAGATA+TGG | 0.352224 | 5_3:+58220885 | Msa0820710:CDS |
| GCCATTTGTGTTGTTGCGCT+TGG | 0.355090 | 5_3:-58219423 | None:intergenic |
| TAGAAGAAATCAAACGGTTC+TGG | 0.355215 | 5_3:+58219347 | Msa0820710:intron |
| CCTGCATATGCTTTCCCACC+TGG | 0.358776 | 5_3:+58219542 | Msa0820710:CDS |
| TGAGAAGATGCGCAACTTGT+TGG | 0.359768 | 5_3:+58221287 | Msa0820710:CDS |
| CACCGGAGGCTGAACATGTT+TGG | 0.362724 | 5_3:-58219657 | None:intergenic |
| ACATTCTCAACATGATTCAT+AGG | 0.366509 | 5_3:-58218902 | None:intergenic |
| TTGGATAAAGCAACACCAAC+TGG | 0.371101 | 5_3:-58221233 | None:intergenic |
| GATGTTCCTGTGTTGGTTGT+TGG | 0.372353 | 5_3:+58218836 | Msa0820710:CDS |
| TGCTATGCTCAGAGGGATCT+TGG | 0.382368 | 5_3:-58220341 | None:intergenic |
| GTGTTGTTGCGCTTGGGGCC+TGG | 0.396203 | 5_3:-58219416 | None:intergenic |
| TTCTGTGCCTAGTGTTGGTC+AGG | 0.402578 | 5_3:+58218925 | Msa0820710:CDS |
| GGACGAAAATTCGGAGCAAC+AGG | 0.414645 | 5_3:-58219491 | None:intergenic |
| CTGAACATGTTTGGCATCAA+TGG | 0.415429 | 5_3:-58219648 | None:intergenic |
| TATGCTCTTGATTATCCAAA+TGG | 0.419271 | 5_3:+58219698 | Msa0820710:CDS |
| CCCAAGCGCAACAACACAAA+TGG | 0.425501 | 5_3:+58219422 | Msa0820710:CDS |
| AAATATTTCAAAAGAATTTG+TGG | 0.425853 | 5_3:+58220813 | Msa0820710:CDS |
| TCCTTTAGTCACTGCTCCTA+TGG | 0.430956 | 5_3:+58221143 | Msa0820710:CDS |
| GGATTCTCACCATTAGGATA+AGG | 0.437709 | 5_3:-58219572 | None:intergenic |
| TGTGAAAGATATGGAGAAGA+AGG | 0.441203 | 5_3:+58220894 | Msa0820710:CDS |
| GAACAACAACAGGAGAAAAC+TGG | 0.441684 | 5_3:+58220366 | Msa0820710:CDS |
| GGCTTAGGATTCTCACCATT+AGG | 0.442479 | 5_3:-58219578 | None:intergenic |
| AATCGGTTCTACAATTCCTT+CGG | 0.444800 | 5_3:+58221098 | Msa0820710:CDS |
| ACCACCCGACTCAATGATAT+CGG | 0.449690 | 5_3:-58220391 | None:intergenic |
| CCTGTATCCCCGGCTGCAGC+AGG | 0.462309 | 5_3:+58219599 | Msa0820710:CDS |
| TTGGTGTTGCTTTATCCAAT+CGG | 0.462526 | 5_3:+58221237 | Msa0820710:CDS |
| GGTTCAGGACCTTATCCTAA+TGG | 0.464993 | 5_3:+58219563 | Msa0820710:CDS |
| AACCTTGTCCTGCTGCAGCC+GGG | 0.469596 | 5_3:-58219607 | None:intergenic |
| GGTACCCTAGGACGAAAATT+CGG | 0.472201 | 5_3:-58219500 | None:intergenic |
| GCTCATTTAAATCAATTTGA+AGG | 0.475975 | 5_3:-58220308 | None:intergenic |
| TCAAATTGATTTAAATGAGC+CGG | 0.477484 | 5_3:+58220311 | Msa0820710:CDS |
| AAACCTTGTCCTGCTGCAGC+CGG | 0.478250 | 5_3:-58219608 | None:intergenic |
| GCATAGCATGGAACAACAAC+AGG | 0.485938 | 5_3:+58220356 | Msa0820710:CDS |
| ACAGGCGGCTGCTGATGATA+AGG | 0.487188 | 5_3:-58219473 | None:intergenic |
| AGAAAGAGCTGGCGAAGACT+TGG | 0.491824 | 5_3:-58218861 | None:intergenic |
| AAAGTCATGCCCCAAGGAAA+GGG | 0.493395 | 5_3:+58220505 | Msa0820710:CDS |
| ATGTTGTGCTTGCTGCCAAT+CGG | 0.496477 | 5_3:+58221081 | Msa0820710:CDS |
| ACGGTTCTGGAAATTTCAAT+CGG | 0.496809 | 5_3:+58219360 | Msa0820710:CDS |
| GCAGCCGGGGATACAGGCTT+AGG | 0.505668 | 5_3:-58219593 | None:intergenic |
| GAATCCTAAGCCTGTATCCC+CGG | 0.509484 | 5_3:+58219589 | Msa0820710:CDS |
| TAATCAAGAGCATAAGCATT+CGG | 0.509536 | 5_3:-58219689 | None:intergenic |
| CATTTGTGTTGTTGCGCTTG+GGG | 0.510276 | 5_3:-58219421 | None:intergenic |
| TGCCAAACATGTTCAGCCTC+CGG | 0.511829 | 5_3:+58219655 | Msa0820710:CDS |
| GGAGTCTCATGTTGTTCCAT+AGG | 0.524662 | 5_3:-58221159 | None:intergenic |
| ATGCCCCAAGGAAAGGGCAT+TGG | 0.524782 | 5_3:+58220511 | Msa0820710:CDS |
| TCACCATGCTATCGAAAGCC+AGG | 0.525059 | 5_3:+58219398 | Msa0820710:CDS |
| GCATGGCTAGCAATTTGAGT+TGG | 0.525594 | 5_3:-58220847 | None:intergenic |
| GAAAGTCATGCCCCAAGGAA+AGG | 0.527463 | 5_3:+58220504 | Msa0820710:CDS |
| GTAATTATGGTGAGGATCAG+AGG | 0.529504 | 5_3:+58218776 | None:intergenic |
| ATTAAATAGAAGAAATCAAA+CGG | 0.530787 | 5_3:+58219341 | Msa0820710:intron |
| GGCACCGATATCATTGAGTC+GGG | 0.531762 | 5_3:+58220387 | Msa0820710:CDS |
| TGTTCCATGCTATGCTCAGA+GGG | 0.536332 | 5_3:-58220348 | None:intergenic |
| GGCTTTCGATAGCATGGTGA+TGG | 0.547691 | 5_3:-58219395 | None:intergenic |
| ATCAGAGTTTAGAATTGCAA+TGG | 0.548775 | 5_3:-58220415 | None:intergenic |
| AATGTTTCTGTGCCTAGTGT+TGG | 0.550067 | 5_3:+58218920 | Msa0820710:CDS |
| TCCCCGGCTGCAGCAGGACA+AGG | 0.550986 | 5_3:+58219605 | Msa0820710:CDS |
| GGGCCTGGCTTTCGATAGCA+TGG | 0.552238 | 5_3:-58219401 | None:intergenic |
| TTTAAGATGGCAGTGTCTTG+AGG | 0.553601 | 5_3:-58221183 | None:intergenic |
| ATTTAAATCAATTTGAAGGA+GGG | 0.554059 | 5_3:-58220304 | None:intergenic |
| TCCATAGGAGCAGTGACTAA+AGG | 0.557140 | 5_3:-58221144 | None:intergenic |
| GTCTGTTGCATTCCTTGAGA+AGG | 0.557189 | 5_3:-58221030 | None:intergenic |
| TTCGGATCTCCTTGCACCGG+AGG | 0.558249 | 5_3:-58219671 | None:intergenic |
| TGTCCAATGCCCTTTCCTTG+GGG | 0.558952 | 5_3:-58220514 | None:intergenic |
| ATGTGAGGTGGAGGTACCCT+AGG | 0.561843 | 5_3:-58219512 | None:intergenic |
| ACCTGAACAGAAGGAGCTCT+AGG | 0.562137 | 5_3:-58218953 | None:intergenic |
| CATGTTCAGCCTCCGGTGCA+AGG | 0.562364 | 5_3:+58219662 | Msa0820710:CDS |
| AACAATCGAACCTGAACAGA+AGG | 0.565912 | 5_3:-58218962 | None:intergenic |
| TTGTTCCATGCTATGCTCAG+AGG | 0.567759 | 5_3:-58220349 | None:intergenic |
| GAGGGATCTTGGACTGAAGC+CGG | 0.570243 | 5_3:-58220330 | None:intergenic |
| CATTTAAATCAATTTGAAGG+AGG | 0.570848 | 5_3:-58220305 | None:intergenic |
| TCAGGAAGTGTAGAACCGAT+TGG | 0.577352 | 5_3:-58221252 | None:intergenic |
| ACCTTGTCCTGCTGCAGCCG+GGG | 0.578501 | 5_3:-58219606 | None:intergenic |
| AAGTGTTGATGTTCCTGTGT+TGG | 0.580284 | 5_3:+58218829 | Msa0820710:CDS |
| TGGCACCGATATCATTGAGT+CGG | 0.583638 | 5_3:+58220386 | Msa0820710:CDS |
| GGAACAGCAATGTGAGGTGG+AGG | 0.583732 | 5_3:-58219521 | None:intergenic |
| CAAAGTGTGATTCCTTCTCA+AGG | 0.586591 | 5_3:+58221018 | Msa0820710:CDS |
| GAAGAAAAGTAATTATGGTG+AGG | 0.586984 | 5_3:+58218768 | None:intergenic |
| ATTGGCAGCAAGCACAACAT+AGG | 0.587278 | 5_3:-58221078 | None:intergenic |
| GTTTGAGCATGAGAAAGAGC+TGG | 0.587648 | 5_3:-58218872 | None:intergenic |
| CCAGGTGGGAAAGCATATGC+AGG | 0.588904 | 5_3:-58219542 | None:intergenic |
| TTAGGATAAGGTCCTGAACC+AGG | 0.588996 | 5_3:-58219560 | None:intergenic |
| ACACTTTGTAGCTCAACTGA+AGG | 0.589388 | 5_3:-58221003 | None:intergenic |
| CTCTTGATTATCCAAATGGA+AGG | 0.589711 | 5_3:+58219702 | Msa0820710:CDS |
| GGAGCAACCTGACCAACACT+AGG | 0.591510 | 5_3:-58218932 | None:intergenic |
| AGATCCCTCTGAGCATAGCA+TGG | 0.596307 | 5_3:+58220344 | Msa0820710:CDS |
| TGGATAAAGCAACACCAACT+GGG | 0.597123 | 5_3:-58221232 | None:intergenic |
| GAAGGAATTGTAGAACCGAT+TGG | 0.605792 | 5_3:-58221096 | None:intergenic |
| CGAAAATTCGGAGCAACAGG+CGG | 0.606908 | 5_3:-58219488 | None:intergenic |
| ATTAAACAAGAATGACACAT+TGG | 0.608999 | 5_3:+58220948 | Msa0820710:CDS |
| GCATCAATGGCATGAGCAGG+TGG | 0.609092 | 5_3:-58219635 | None:intergenic |
| ACCGATATCATTGAGTCGGG+TGG | 0.615037 | 5_3:+58220390 | Msa0820710:CDS |
| GCATTCGGATCTCCTTGCAC+CGG | 0.618195 | 5_3:-58219674 | None:intergenic |
| TTGGCATCAATGGCATGAGC+AGG | 0.623729 | 5_3:-58219638 | None:intergenic |
| CAGAAGAAAGTCATGCCCCA+AGG | 0.636413 | 5_3:+58220499 | Msa0820710:CDS |
| GCAGGAACAGCAATGTGAGG+TGG | 0.639750 | 5_3:-58219524 | None:intergenic |
| TTCACTTCACTGTGGCGACG+AGG | 0.644157 | 5_3:+58219450 | Msa0820710:CDS |
| AAGATGGCAGTGTCTTGAGG+AGG | 0.644314 | 5_3:-58221180 | None:intergenic |
| TGACAACTTGCAAACCCAGT+TGG | 0.648867 | 5_3:+58221218 | Msa0820710:CDS |
| ATTATGGTGAGGATCAGAGG+AGG | 0.653905 | 5_3:+58218779 | None:intergenic |
| GATAAGGTCCTGAACCAGGT+GGG | 0.657071 | 5_3:-58219556 | None:intergenic |
| AAGGAAAGGGCATTGGACAG+AGG | 0.658250 | 5_3:+58220518 | Msa0820710:CDS |
| GGATCAGAGGAGGAAAGCAG+AGG | 0.659593 | 5_3:+58218789 | Msa0820710:CDS |
| TTGGTTCCAACAACCAACAC+AGG | 0.665985 | 5_3:-58218842 | None:intergenic |
| TATGCAGGAACAGCAATGTG+AGG | 0.684479 | 5_3:-58219527 | None:intergenic |
| GGATAAGGTCCTGAACCAGG+TGG | 0.691288 | 5_3:-58219557 | None:intergenic |
| TGGCACGCTTCACTTCACTG+TGG | 0.808494 | 5_3:+58219442 | Msa0820710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATAGAAGAAATCAAA+CGG | + | chr5_3:58219341-58219360 | Msa0820710:intron | 15.0% |
| !!! | AATTCTTATAGTTGTATTTT+TGG | + | chr5_3:58220243-58220262 | Msa0820710:intron | 15.0% |
| !! | AAAAAATAACTTTCAAACAT+AGG | - | chr5_3:58220582-58220601 | None:intergenic | 15.0% |
| !! | AAATATTTCAAAAGAATTTG+TGG | + | chr5_3:58220813-58220832 | Msa0820710:CDS | 15.0% |
| !! | ATTATGATATCTTCTTGTTA+TGG | + | chr5_3:58220003-58220022 | Msa0820710:intron | 20.0% |
| !! | TGAAAGTTAAGAAAATTACT+TGG | - | chr5_3:58220054-58220073 | None:intergenic | 20.0% |
| !!! | ATTTTCTTAACTTTCATGAT+TGG | + | chr5_3:58220058-58220077 | Msa0820710:intron | 20.0% |
| !!! | CATGCATAATATTTTTTGAA+TGG | - | chr5_3:58220189-58220208 | None:intergenic | 20.0% |
| !! | TTCAAAAAATATTATGCATG+TGG | + | chr5_3:58220189-58220208 | Msa0820710:intron | 20.0% |
| !! | TAATTCAAATTGGATGAAAT+TGG | + | chr5_3:58220215-58220234 | Msa0820710:intron | 20.0% |
| !! | ATTTAAATCAATTTGAAGGA+GGG | - | chr5_3:58220307-58220326 | None:intergenic | 20.0% |
| !!! | TATATATAGGTTGTTTTTGA+AGG | + | chr5_3:58220759-58220778 | Msa0820710:intron | 20.0% |
| !!! | ATATATAGGTTGTTTTTGAA+GGG | + | chr5_3:58220760-58220779 | Msa0820710:intron | 20.0% |
| !! | TTAGTGTAATGTGATTTTGA+TGG | + | chr5_3:58219039-58219058 | Msa0820710:intron | 25.0% |
| ! | TAAACAACGAGTGAAAAATA+TGG | + | chr5_3:58219183-58219202 | Msa0820710:intron | 25.0% |
| ! | TTCTACAATATTCTTAACTC+TGG | + | chr5_3:58219269-58219288 | Msa0820710:intron | 25.0% |
| ! | TCTACAATATTCTTAACTCT+GGG | + | chr5_3:58219270-58219289 | Msa0820710:intron | 25.0% |
| ! | ATCATATAAAAGACAAGATC+AGG | - | chr5_3:58219889-58219908 | None:intergenic | 25.0% |
| !!! | AGGCATAATTGATTTGATTA+AGG | + | chr5_3:58220097-58220116 | Msa0820710:intron | 25.0% |
| ! | CATGTGGATATAATTCAAAT+TGG | + | chr5_3:58220205-58220224 | Msa0820710:intron | 25.0% |
| !!! | TATTTTTGGTATAGAAAGCA+TGG | + | chr5_3:58220257-58220276 | Msa0820710:intron | 25.0% |
| ! | CATTTAAATCAATTTGAAGG+AGG | - | chr5_3:58220308-58220327 | None:intergenic | 25.0% |
| ! | GCTCATTTAAATCAATTTGA+AGG | - | chr5_3:58220311-58220330 | None:intergenic | 25.0% |
| !! | TCAAATTGATTTAAATGAGC+CGG | + | chr5_3:58220311-58220330 | Msa0820710:CDS | 25.0% |
| ! | CACATTCATTCTCTATATAT+AGG | + | chr5_3:58220746-58220765 | Msa0820710:intron | 25.0% |
| !!! | TATATAGGTTGTTTTTGAAG+GGG | + | chr5_3:58220761-58220780 | Msa0820710:intron | 25.0% |
| !!! | TTGGTGGATAAAGTATTTTT+GGG | - | chr5_3:58220872-58220891 | None:intergenic | 25.0% |
| !!! | TTTGGTGGATAAAGTATTTT+TGG | - | chr5_3:58220873-58220892 | None:intergenic | 25.0% |
| ! | ATTAAACAAGAATGACACAT+TGG | + | chr5_3:58220948-58220967 | Msa0820710:CDS | 25.0% |
| !!! | ATTGTCCTTTTTGTTTAAGA+TGG | - | chr5_3:58221199-58221218 | None:intergenic | 25.0% |
| ! | TCAACATGATTCATAGGTTT+TGG | - | chr5_3:58218899-58218918 | None:intergenic | 30.0% |
| ACATTCTCAACATGATTCAT+AGG | - | chr5_3:58218905-58218924 | None:intergenic | 30.0% | |
| CTCTTATGCTTGCAATAATA+TGG | - | chr5_3:58219120-58219139 | None:intergenic | 30.0% | |
| !! | CAGCTTTTATTTCAATCGAA+GGG | - | chr5_3:58219247-58219266 | None:intergenic | 30.0% |
| !! | ACAGCTTTTATTTCAATCGA+AGG | - | chr5_3:58219248-58219267 | None:intergenic | 30.0% |
| TTTAATCACAGATCCATACA+CGG | - | chr5_3:58219327-58219346 | None:intergenic | 30.0% | |
| ! | TAATCAAGAGCATAAGCATT+CGG | - | chr5_3:58219692-58219711 | None:intergenic | 30.0% |
| TATGCTCTTGATTATCCAAA+TGG | + | chr5_3:58219698-58219717 | Msa0820710:CDS | 30.0% | |
| !!! | TCACCTTGTTTTTGGATATT+TGG | - | chr5_3:58219728-58219747 | None:intergenic | 30.0% |
| TTACTTTGATACCATTGAAG+TGG | + | chr5_3:58219933-58219952 | Msa0820710:intron | 30.0% | |
| ! | TCTTGTTATGGTTCTGTAAT+TGG | + | chr5_3:58220015-58220034 | Msa0820710:intron | 30.0% |
| !! | CTGTAATTGGTTTGAGTAAT+TGG | + | chr5_3:58220028-58220047 | Msa0820710:intron | 30.0% |
| !!! | GCATCATTTTTTGAGTAAAC+CGG | + | chr5_3:58220119-58220138 | Msa0820710:intron | 30.0% |
| !!! | CATCATTTTTTGAGTAAACC+GGG | + | chr5_3:58220120-58220139 | Msa0820710:intron | 30.0% |
| ! | ATCAGAGTTTAGAATTGCAA+TGG | - | chr5_3:58220418-58220437 | None:intergenic | 30.0% |
| ! | TCTCCATATCTTTCACATTT+TGG | - | chr5_3:58220891-58220910 | None:intergenic | 30.0% |
| AGAAGGAGAAAAAGAGAAAA+AGG | + | chr5_3:58220911-58220930 | Msa0820710:CDS | 30.0% | |
| ! | TTCTCAAGTTTGTTCATATC+AGG | - | chr5_3:58221273-58221292 | None:intergenic | 30.0% |
| TAGAAGAAATCAAACGGTTC+TGG | + | chr5_3:58219347-58219366 | Msa0820710:intron | 35.0% | |
| !! | ACGGTTCTGGAAATTTCAAT+CGG | + | chr5_3:58219360-58219379 | Msa0820710:CDS | 35.0% |
| CTCTTGATTATCCAAATGGA+AGG | + | chr5_3:58219702-58219721 | Msa0820710:CDS | 35.0% | |
| AGGCCAAATATCCAAAAACA+AGG | + | chr5_3:58219722-58219741 | Msa0820710:CDS | 35.0% | |
| GTCAATGAAGTTCATTCACA+TGG | - | chr5_3:58219751-58219770 | None:intergenic | 35.0% | |
| !! | AGATTTTAGCCTCGTTTTCT+TGG | + | chr5_3:58219810-58219829 | Msa0820710:intron | 35.0% |
| GAAACTTAACCAAGAAAACG+AGG | - | chr5_3:58219822-58219841 | None:intergenic | 35.0% | |
| GCAACTAAAATCCACTTCAA+TGG | - | chr5_3:58219947-58219966 | None:intergenic | 35.0% | |
| ! | TTGGCTAGTTCATCTGATTA+AGG | + | chr5_3:58220077-58220096 | Msa0820710:intron | 35.0% |
| TTGAAGGGGATGAAAAAACA+TGG | + | chr5_3:58220775-58220794 | Msa0820710:CDS | 35.0% | |
| GGGATGAAAAAACATGGAAA+GGG | + | chr5_3:58220781-58220800 | Msa0820710:CDS | 35.0% | |
| !!! | GGATAAAGTATTTTTGGGCA+TGG | - | chr5_3:58220867-58220886 | None:intergenic | 35.0% |
| ! | CCATATCTTTCACATTTTGG+TGG | - | chr5_3:58220888-58220907 | None:intergenic | 35.0% |
| CCACCAAAATGTGAAAGATA+TGG | + | chr5_3:58220885-58220904 | Msa0820710:CDS | 35.0% | |
| TGTGAAAGATATGGAGAAGA+AGG | + | chr5_3:58220894-58220913 | Msa0820710:CDS | 35.0% | |
| ! | AATCGGTTCTACAATTCCTT+CGG | + | chr5_3:58221098-58221117 | Msa0820710:CDS | 35.0% |
| CACTGCCATCTTAAACAAAA+AGG | + | chr5_3:58221191-58221210 | Msa0820710:CDS | 35.0% | |
| !! | TTGGTGTTGCTTTATCCAAT+CGG | + | chr5_3:58221237-58221256 | Msa0820710:CDS | 35.0% |
| !! | AAGTGTTGATGTTCCTGTGT+TGG | + | chr5_3:58218829-58218848 | Msa0820710:CDS | 40.0% |
| ! | AATGTTTCTGTGCCTAGTGT+TGG | + | chr5_3:58218920-58218939 | Msa0820710:CDS | 40.0% |
| AACAATCGAACCTGAACAGA+AGG | - | chr5_3:58218965-58218984 | None:intergenic | 40.0% | |
| ! | TTTGCCTGATTTTCCGTGTA+TGG | + | chr5_3:58219311-58219330 | Msa0820710:intron | 40.0% |
| AGATCCATACACGGAAAATC+AGG | - | chr5_3:58219318-58219337 | None:intergenic | 40.0% | |
| GGATTCTCACCATTAGGATA+AGG | - | chr5_3:58219575-58219594 | None:intergenic | 40.0% | |
| CTGAACATGTTTGGCATCAA+TGG | - | chr5_3:58219651-58219670 | None:intergenic | 40.0% | |
| ! | TGGATATTTGGCCTTCCATT+TGG | - | chr5_3:58219716-58219735 | None:intergenic | 40.0% |
| !!! | TCACATGGTCACCTTGTTTT+TGG | - | chr5_3:58219736-58219755 | None:intergenic | 40.0% |
| !! | AAGATTCTAGCTTAACCCTG+TGG | + | chr5_3:58219842-58219861 | Msa0820710:intron | 40.0% |
| !!! | TTAACCCTGTGGTGCTTTTT+TGG | + | chr5_3:58219853-58219872 | Msa0820710:intron | 40.0% |
| !!! | TAACCCTGTGGTGCTTTTTT+GGG | + | chr5_3:58219854-58219873 | Msa0820710:intron | 40.0% |
| !! | ATACCCAAAAAAGCACCACA+GGG | - | chr5_3:58219860-58219879 | None:intergenic | 40.0% |
| !! | AATACCCAAAAAAGCACCAC+AGG | - | chr5_3:58219861-58219880 | None:intergenic | 40.0% |
| GAACAACAACAGGAGAAAAC+TGG | + | chr5_3:58220366-58220385 | Msa0820710:CDS | 40.0% | |
| GGGGATGAAAAAACATGGAA+AGG | + | chr5_3:58220780-58220799 | Msa0820710:CDS | 40.0% | |
| ACACTTTGTAGCTCAACTGA+AGG | - | chr5_3:58221006-58221025 | None:intergenic | 40.0% | |
| CAAAGTGTGATTCCTTCTCA+AGG | + | chr5_3:58221018-58221037 | Msa0820710:CDS | 40.0% | |
| GAAGGAATTGTAGAACCGAT+TGG | - | chr5_3:58221099-58221118 | None:intergenic | 40.0% | |
| ! | TTTAAGATGGCAGTGTCTTG+AGG | - | chr5_3:58221186-58221205 | None:intergenic | 40.0% |
| TGGATAAAGCAACACCAACT+GGG | - | chr5_3:58221235-58221254 | None:intergenic | 40.0% | |
| TTGGATAAAGCAACACCAAC+TGG | - | chr5_3:58221236-58221255 | None:intergenic | 40.0% | |
| !! | GATGTTCCTGTGTTGGTTGT+TGG | + | chr5_3:58218836-58218855 | Msa0820710:CDS | 45.0% |
| TTGGTTCCAACAACCAACAC+AGG | - | chr5_3:58218845-58218864 | None:intergenic | 45.0% | |
| GTTTGAGCATGAGAAAGAGC+TGG | - | chr5_3:58218875-58218894 | None:intergenic | 45.0% | |
| ! | GCGAGTCGACAAATCTGTTT+TGG | + | chr5_3:58219205-58219224 | Msa0820710:intron | 45.0% |
| ! | CATTTGTGTTGTTGCGCTTG+GGG | - | chr5_3:58219424-58219443 | None:intergenic | 45.0% |
| ! | CCATTTGTGTTGTTGCGCTT+GGG | - | chr5_3:58219425-58219444 | None:intergenic | 45.0% |
| ! | TTGCTCCGAATTTTCGTCCT+AGG | + | chr5_3:58219495-58219514 | Msa0820710:CDS | 45.0% |
| ! | TGCTCCGAATTTTCGTCCTA+GGG | + | chr5_3:58219496-58219515 | Msa0820710:CDS | 45.0% |
| GGTACCCTAGGACGAAAATT+CGG | - | chr5_3:58219503-58219522 | None:intergenic | 45.0% | |
| TATGCAGGAACAGCAATGTG+AGG | - | chr5_3:58219530-58219549 | None:intergenic | 45.0% | |
| TTAGGATAAGGTCCTGAACC+AGG | - | chr5_3:58219563-58219582 | None:intergenic | 45.0% | |
| GGTTCAGGACCTTATCCTAA+TGG | + | chr5_3:58219563-58219582 | Msa0820710:CDS | 45.0% | |
| GGCTTAGGATTCTCACCATT+AGG | - | chr5_3:58219581-58219600 | None:intergenic | 45.0% | |
| TGTTCCATGCTATGCTCAGA+GGG | - | chr5_3:58220351-58220370 | None:intergenic | 45.0% | |
| TTGTTCCATGCTATGCTCAG+AGG | - | chr5_3:58220352-58220371 | None:intergenic | 45.0% | |
| GCATAGCATGGAACAACAAC+AGG | + | chr5_3:58220356-58220375 | Msa0820710:CDS | 45.0% | |
| !! | TGGCACCGATATCATTGAGT+CGG | + | chr5_3:58220386-58220405 | Msa0820710:CDS | 45.0% |
| ACCACCCGACTCAATGATAT+CGG | - | chr5_3:58220394-58220413 | None:intergenic | 45.0% | |
| AAAGTCATGCCCCAAGGAAA+GGG | + | chr5_3:58220505-58220524 | Msa0820710:CDS | 45.0% | |
| AAAAACATGGAAAGGGACGC+TGG | + | chr5_3:58220788-58220807 | Msa0820710:CDS | 45.0% | |
| GCATGGCTAGCAATTTGAGT+TGG | - | chr5_3:58220850-58220869 | None:intergenic | 45.0% | |
| GTCTGTTGCATTCCTTGAGA+AGG | - | chr5_3:58221033-58221052 | None:intergenic | 45.0% | |
| ATTGGCAGCAAGCACAACAT+AGG | - | chr5_3:58221081-58221100 | None:intergenic | 45.0% | |
| ! | ATGTTGTGCTTGCTGCCAAT+CGG | + | chr5_3:58221081-58221100 | Msa0820710:CDS | 45.0% |
| !! | TCGTTTTGTTGCTGAACCGA+AGG | - | chr5_3:58221117-58221136 | None:intergenic | 45.0% |
| TCCTTTAGTCACTGCTCCTA+TGG | + | chr5_3:58221143-58221162 | Msa0820710:CDS | 45.0% | |
| TCCATAGGAGCAGTGACTAA+AGG | - | chr5_3:58221147-58221166 | None:intergenic | 45.0% | |
| GGAGTCTCATGTTGTTCCAT+AGG | - | chr5_3:58221162-58221181 | None:intergenic | 45.0% | |
| TGACAACTTGCAAACCCAGT+TGG | + | chr5_3:58221218-58221237 | Msa0820710:CDS | 45.0% | |
| ! | TCAGGAAGTGTAGAACCGAT+TGG | - | chr5_3:58221255-58221274 | None:intergenic | 45.0% |
| TGAGAAGATGCGCAACTTGT+TGG | + | chr5_3:58221287-58221306 | Msa0820710:CDS | 45.0% | |
| AGAAAGAGCTGGCGAAGACT+TGG | - | chr5_3:58218864-58218883 | None:intergenic | 50.0% | |
| !! | TTCTGTGCCTAGTGTTGGTC+AGG | + | chr5_3:58218925-58218944 | Msa0820710:CDS | 50.0% |
| TCCTAGAGCTCCTTCTGTTC+AGG | + | chr5_3:58218952-58218971 | Msa0820710:CDS | 50.0% | |
| ACCTGAACAGAAGGAGCTCT+AGG | - | chr5_3:58218956-58218975 | None:intergenic | 50.0% | |
| GGCTTTCGATAGCATGGTGA+TGG | - | chr5_3:58219398-58219417 | None:intergenic | 50.0% | |
| TCACCATGCTATCGAAAGCC+AGG | + | chr5_3:58219398-58219417 | Msa0820710:CDS | 50.0% | |
| CCCAAGCGCAACAACACAAA+TGG | + | chr5_3:58219422-58219441 | Msa0820710:CDS | 50.0% | |
| ! | GCCATTTGTGTTGTTGCGCT+TGG | - | chr5_3:58219426-58219445 | None:intergenic | 50.0% |
| CGAAAATTCGGAGCAACAGG+CGG | - | chr5_3:58219491-58219510 | None:intergenic | 50.0% | |
| GGACGAAAATTCGGAGCAAC+AGG | - | chr5_3:58219494-58219513 | None:intergenic | 50.0% | |
| TATGCTTTCCCACCTGGTTC+AGG | + | chr5_3:58219548-58219567 | Msa0820710:CDS | 50.0% | |
| GATAAGGTCCTGAACCAGGT+GGG | - | chr5_3:58219559-58219578 | None:intergenic | 50.0% | |
| GAATCCTAAGCCTGTATCCC+CGG | + | chr5_3:58219589-58219608 | Msa0820710:CDS | 50.0% | |
| TTGGCATCAATGGCATGAGC+AGG | - | chr5_3:58219641-58219660 | None:intergenic | 50.0% | |
| TGCCAAACATGTTCAGCCTC+CGG | + | chr5_3:58219655-58219674 | Msa0820710:CDS | 50.0% | |
| TGAGTAAACCGGGTGATGCT+AGG | + | chr5_3:58220130-58220149 | Msa0820710:intron | 50.0% | |
| GAGTAAACCGGGTGATGCTA+GGG | + | chr5_3:58220131-58220150 | Msa0820710:intron | 50.0% | |
| TCTTAGTCCCTAGCATCACC+CGG | - | chr5_3:58220141-58220160 | None:intergenic | 50.0% | |
| TGCTATGCTCAGAGGGATCT+TGG | - | chr5_3:58220344-58220363 | None:intergenic | 50.0% | |
| AGATCCCTCTGAGCATAGCA+TGG | + | chr5_3:58220344-58220363 | Msa0820710:CDS | 50.0% | |
| !! | GGCACCGATATCATTGAGTC+GGG | + | chr5_3:58220387-58220406 | Msa0820710:CDS | 50.0% |
| ACCGATATCATTGAGTCGGG+TGG | + | chr5_3:58220390-58220409 | Msa0820710:CDS | 50.0% | |
| CTTGGGGCATGACTTTCTTC+TGG | - | chr5_3:58220501-58220520 | None:intergenic | 50.0% | |
| CAGAAGAAAGTCATGCCCCA+AGG | + | chr5_3:58220499-58220518 | Msa0820710:CDS | 50.0% | |
| GAAAGTCATGCCCCAAGGAA+AGG | + | chr5_3:58220504-58220523 | Msa0820710:CDS | 50.0% | |
| TGTCCAATGCCCTTTCCTTG+GGG | - | chr5_3:58220517-58220536 | None:intergenic | 50.0% | |
| CTGTCCAATGCCCTTTCCTT+GGG | - | chr5_3:58220518-58220537 | None:intergenic | 50.0% | |
| TCTGTCCAATGCCCTTTCCT+TGG | - | chr5_3:58220519-58220538 | None:intergenic | 50.0% | |
| !! | AAGGAAAGGGCATTGGACAG+AGG | + | chr5_3:58220518-58220537 | Msa0820710:CDS | 50.0% |
| AAGATGGCAGTGTCTTGAGG+AGG | - | chr5_3:58221183-58221202 | None:intergenic | 50.0% | |
| GGATCAGAGGAGGAAAGCAG+AGG | + | chr5_3:58218789-58218808 | Msa0820710:CDS | 55.0% | |
| GGAGCAACCTGACCAACACT+AGG | - | chr5_3:58218935-58218954 | None:intergenic | 55.0% | |
| TGGCACGCTTCACTTCACTG+TGG | + | chr5_3:58219442-58219461 | Msa0820710:CDS | 55.0% | |
| TTCACTTCACTGTGGCGACG+AGG | + | chr5_3:58219450-58219469 | Msa0820710:CDS | 55.0% | |
| ACAGGCGGCTGCTGATGATA+AGG | - | chr5_3:58219476-58219495 | None:intergenic | 55.0% | |
| !! | ATGTGAGGTGGAGGTACCCT+AGG | - | chr5_3:58219515-58219534 | None:intergenic | 55.0% |
| GGAACAGCAATGTGAGGTGG+AGG | - | chr5_3:58219524-58219543 | None:intergenic | 55.0% | |
| GCAGGAACAGCAATGTGAGG+TGG | - | chr5_3:58219527-58219546 | None:intergenic | 55.0% | |
| ! | CCAGGTGGGAAAGCATATGC+AGG | - | chr5_3:58219545-58219564 | None:intergenic | 55.0% |
| CCTGCATATGCTTTCCCACC+TGG | + | chr5_3:58219542-58219561 | Msa0820710:CDS | 55.0% | |
| GGATAAGGTCCTGAACCAGG+TGG | - | chr5_3:58219560-58219579 | None:intergenic | 55.0% | |
| AAACCTTGTCCTGCTGCAGC+CGG | - | chr5_3:58219611-58219630 | None:intergenic | 55.0% | |
| GCATCAATGGCATGAGCAGG+TGG | - | chr5_3:58219638-58219657 | None:intergenic | 55.0% | |
| CACCGGAGGCTGAACATGTT+TGG | - | chr5_3:58219660-58219679 | None:intergenic | 55.0% | |
| GCATTCGGATCTCCTTGCAC+CGG | - | chr5_3:58219677-58219696 | None:intergenic | 55.0% | |
| GAGGGATCTTGGACTGAAGC+CGG | - | chr5_3:58220333-58220352 | None:intergenic | 55.0% | |
| ! | ATGCCCCAAGGAAAGGGCAT+TGG | + | chr5_3:58220511-58220530 | Msa0820710:CDS | 55.0% |
| ! | GGGCCTGGCTTTCGATAGCA+TGG | - | chr5_3:58219404-58219423 | None:intergenic | 60.0% |
| AACCTTGTCCTGCTGCAGCC+GGG | - | chr5_3:58219610-58219629 | None:intergenic | 60.0% | |
| CATGTTCAGCCTCCGGTGCA+AGG | + | chr5_3:58219662-58219681 | Msa0820710:CDS | 60.0% | |
| TTCGGATCTCCTTGCACCGG+AGG | - | chr5_3:58219674-58219693 | None:intergenic | 60.0% | |
| ! | GTGTTGTTGCGCTTGGGGCC+TGG | - | chr5_3:58219419-58219438 | None:intergenic | 65.0% |
| GCAGCCGGGGATACAGGCTT+AGG | - | chr5_3:58219596-58219615 | None:intergenic | 65.0% | |
| ACCTTGTCCTGCTGCAGCCG+GGG | - | chr5_3:58219609-58219628 | None:intergenic | 65.0% | |
| CCTGCTGCAGCCGGGGATAC+AGG | - | chr5_3:58219602-58219621 | None:intergenic | 70.0% | |
| CCTGTATCCCCGGCTGCAGC+AGG | + | chr5_3:58219599-58219618 | Msa0820710:CDS | 70.0% | |
| TCCCCGGCTGCAGCAGGACA+AGG | + | chr5_3:58219605-58219624 | Msa0820710:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 58218782 | 58221323 | 58218782 | ID=Msa0820710;Name=Msa0820710 |
| chr5_3 | mRNA | 58218782 | 58221323 | 58218782 | ID=Msa0820710-mRNA-1;Parent=Msa0820710;Name=Msa0820710-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|4|0|473 |
| chr5_3 | exon | 58218782 | 58218973 | 58218782 | ID=Msa0820710-mRNA-1:exon:17688;Parent=Msa0820710-mRNA-1 |
| chr5_3 | exon | 58219350 | 58219743 | 58219350 | ID=Msa0820710-mRNA-1:exon:17689;Parent=Msa0820710-mRNA-1 |
| chr5_3 | exon | 58220271 | 58220550 | 58220271 | ID=Msa0820710-mRNA-1:exon:17690;Parent=Msa0820710-mRNA-1 |
| chr5_3 | exon | 58220768 | 58221323 | 58220768 | ID=Msa0820710-mRNA-1:exon:17691;Parent=Msa0820710-mRNA-1 |
| chr5_3 | CDS | 58218782 | 58218973 | 58218782 | ID=Msa0820710-mRNA-1:cds;Parent=Msa0820710-mRNA-1 |
| chr5_3 | CDS | 58219350 | 58219743 | 58219350 | ID=Msa0820710-mRNA-1:cds;Parent=Msa0820710-mRNA-1 |
| chr5_3 | CDS | 58220271 | 58220550 | 58220271 | ID=Msa0820710-mRNA-1:cds;Parent=Msa0820710-mRNA-1 |
| chr5_3 | CDS | 58220768 | 58221323 | 58220768 | ID=Msa0820710-mRNA-1:cds;Parent=Msa0820710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
