Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826350 | XP_003618007.1 | 76.844 | 583 | 70 | 4 | 7 | 588 | 14 | 532 | 0.0 | 835 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826350 | G7K4Z3 | 76.844 | 583 | 70 | 4 | 7 | 588 | 14 | 532 | 0.0 | 835 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0826350 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826350 | MtrunA17_Chr5g0447971 | 76.844 | 583 | 70 | 4 | 7 | 588 | 14 | 532 | 0.0 | 835 |
| Msa0826350 | MtrunA17_Chr3g0086321 | 68.240 | 233 | 70 | 1 | 360 | 588 | 161 | 393 | 1.14e-100 | 311 |
| Msa0826350 | MtrunA17_Chr3g0086321 | 76.613 | 124 | 25 | 1 | 65 | 188 | 80 | 199 | 2.54e-56 | 194 |
| Msa0826350 | MtrunA17_Chr3g0086321 | 32.000 | 225 | 89 | 6 | 264 | 424 | 161 | 385 | 1.49e-15 | 79.0 |
| Msa0826350 | MtrunA17_Chr3g0086321 | 29.518 | 166 | 93 | 3 | 417 | 580 | 82 | 225 | 1.33e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826350 | AT5G61190.10 | 26.596 | 188 | 107 | 5 | 393 | 580 | 240 | 396 | 3.46e-11 | 67.0 |
| Msa0826350 | AT5G61190.1 | 26.596 | 188 | 107 | 5 | 393 | 580 | 240 | 396 | 3.81e-11 | 66.6 |
| Msa0826350 | AT5G61190.7 | 26.596 | 188 | 107 | 5 | 393 | 580 | 146 | 302 | 4.28e-11 | 66.6 |
| Msa0826350 | AT5G61190.3 | 26.596 | 188 | 107 | 5 | 393 | 580 | 146 | 302 | 4.28e-11 | 66.6 |
| Msa0826350 | AT5G61190.4 | 26.178 | 191 | 110 | 5 | 393 | 583 | 240 | 399 | 4.64e-11 | 66.2 |
| Msa0826350 | AT5G61190.2 | 26.178 | 191 | 110 | 5 | 393 | 583 | 240 | 399 | 4.64e-11 | 66.2 |
| Msa0826350 | AT5G61190.5 | 26.596 | 188 | 107 | 5 | 393 | 580 | 240 | 396 | 5.44e-11 | 66.2 |
| Msa0826350 | AT5G61190.11 | 26.596 | 188 | 107 | 5 | 393 | 580 | 240 | 396 | 5.44e-11 | 66.2 |
| Msa0826350 | AT5G61190.6 | 26.596 | 188 | 107 | 5 | 393 | 580 | 240 | 396 | 5.63e-11 | 66.2 |
| Msa0826350 | AT5G61190.9 | 26.596 | 188 | 107 | 5 | 393 | 580 | 240 | 396 | 5.95e-11 | 66.2 |
| Msa0826350 | AT5G61190.8 | 26.596 | 188 | 107 | 5 | 393 | 580 | 240 | 396 | 6.26e-11 | 65.9 |
Find 129 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTGGCAACTTCAAATTTA+TGG | 0.103793 | 5_3:+66704990 | Msa0826350:CDS |
| CTTCTTAGGCTCTGATTGTT+TGG | 0.209399 | 5_3:-66705402 | None:intergenic |
| CTGTTTCATTGTTTGTGTTT+TGG | 0.270659 | 5_3:+66707998 | Msa0826350:three_prime_UTR |
| TTCGGCTAAAGGACCAATTA+AGG | 0.271027 | 5_3:-66705768 | None:intergenic |
| ACAAAATCAACCTGCTTCTT+AGG | 0.280074 | 5_3:-66705416 | None:intergenic |
| TTCAATGCTTCTAATATTGC+AGG | 0.282177 | 5_3:+66704731 | None:intergenic |
| TGCGCAGAAGGCAAACTTGC+AGG | 0.288386 | 5_3:-66704873 | None:intergenic |
| TTCTTAGGCTCTGATTGTTT+GGG | 0.304970 | 5_3:-66705401 | None:intergenic |
| TTTCTTAGGCTCTGATTGTT+TGG | 0.305574 | 5_3:-66705690 | None:intergenic |
| ATACTATCAACCTGTTTCTT+AGG | 0.309233 | 5_3:-66705254 | None:intergenic |
| CCGCTGCCAACACCGACTTT+TGG | 0.320862 | 5_3:-66707576 | None:intergenic |
| ACAGAATCAACCTGTTTCTT+AGG | 0.324318 | 5_3:-66705512 | None:intergenic |
| ACAGAATCAACCTGTTTCTT+AGG | 0.324318 | 5_3:-66705704 | None:intergenic |
| ACAGAATCAACCTGTTTCTT+AGG | 0.324318 | 5_3:-66705800 | None:intergenic |
| ACAGAATCAACCTGTTTCTT+AGG | 0.324318 | 5_3:-66705896 | None:intergenic |
| ATCCAAGGACAAACATTAAT+TGG | 0.324738 | 5_3:+66705467 | Msa0826350:CDS |
| AAGTTTCTCTAATAAGTAAA+AGG | 0.337461 | 5_3:-66707971 | None:intergenic |
| CTTCTGCACGTAATGGTTCC+TGG | 0.342961 | 5_3:+66704973 | Msa0826350:CDS |
| ACCGCAATAGGCACTTCAAT+TGG | 0.345252 | 5_3:+66707615 | Msa0826350:CDS |
| TCACCATAGCAGCATGATTA+TGG | 0.346041 | 5_3:-66707815 | None:intergenic |
| ACGGAATCAACCTGTTTCTT+AGG | 0.353929 | 5_3:-66705320 | None:intergenic |
| CGTGCAGAAGGCAAACTTGC+AGG | 0.359812 | 5_3:-66704960 | None:intergenic |
| GTTCTTCAAGTGTTTCTTAC+CGG | 0.360756 | 5_3:-66707535 | None:intergenic |
| ATCCAAGGACAAGCGTTAAT+TGG | 0.362815 | 5_3:+66705851 | Msa0826350:CDS |
| TTGTAAACCTCAATGCATAA+TGG | 0.365561 | 5_3:-66708042 | None:intergenic |
| GCCAATGCTTCTAATATTGC+CGG | 0.369202 | 5_3:+66704905 | Msa0826350:CDS |
| ATCCAAGGACAAGCATTAAT+TGG | 0.369738 | 5_3:+66705659 | Msa0826350:CDS |
| ATCCAATCACAAGCCTTAAT+TGG | 0.371873 | 5_3:+66705755 | Msa0826350:CDS |
| GAAACAGGTTGATTCTGTTA+AGG | 0.378526 | 5_3:+66705901 | Msa0826350:CDS |
| ATCCAAGGTCAAGCGTTAAT+TGG | 0.378876 | 5_3:+66705209 | Msa0826350:CDS |
| CGCTTGAGTTCGGCAATAGA+TGG | 0.381144 | 5_3:-66707396 | None:intergenic |
| GGCTCTGATTGTTCGGCTAC+AGG | 0.383641 | 5_3:-66705587 | None:intergenic |
| TTTCTTAGGCTCTGATTGTT+CGG | 0.390268 | 5_3:-66705306 | None:intergenic |
| TTTCTTAGGCTCTGATTGTT+CGG | 0.390268 | 5_3:-66705786 | None:intergenic |
| TTTCTTAGGCTCTGATTGTT+CGG | 0.390268 | 5_3:-66705882 | None:intergenic |
| GGCTCTGATTGTTCGGCTAC+AGG | 0.393801 | 5_3:-66705299 | None:intergenic |
| TGAACAGAAGGCAAACTTGC+AGG | 0.394062 | 5_3:-66704786 | None:intergenic |
| GGCTCTGATTGTTCGGCTAT+AGG | 0.407509 | 5_3:-66705875 | None:intergenic |
| GCAATCAGAGCCTAAGAAAC+AGG | 0.410131 | 5_3:+66705244 | Msa0826350:CDS |
| AAGCTTTGCTGACTTTGGTT+TGG | 0.410273 | 5_3:-66705040 | None:intergenic |
| TCTGAAAGCTTTGCTGACTT+TGG | 0.410594 | 5_3:-66705045 | None:intergenic |
| GCCATAAATTTGAAGTTGCC+AGG | 0.413010 | 5_3:-66704991 | None:intergenic |
| GGCTCTGATTGTTCGGCTAA+AGG | 0.413854 | 5_3:-66705779 | None:intergenic |
| GACTGCAAAATTACAAGCAT+TGG | 0.415529 | 5_3:-66704819 | None:intergenic |
| GACCAATTAATGTTTGTCCT+TGG | 0.416054 | 5_3:-66705469 | None:intergenic |
| ACTACCACCACCACCGCAAT+AGG | 0.416616 | 5_3:+66707603 | Msa0826350:CDS |
| ACAATCAGAGCCTAAGAAAC+AGG | 0.424333 | 5_3:+66705694 | Msa0826350:CDS |
| TTCGCATGAGATGCAATTGT+AGG | 0.424733 | 5_3:-66705164 | None:intergenic |
| GACCAATTAAGGCTTGTGAT+TGG | 0.426163 | 5_3:-66705757 | None:intergenic |
| TTTCTTAGGCTCTGATTGCC+CGG | 0.426220 | 5_3:-66705498 | None:intergenic |
| GGCTCTGATTGCCCGGCTAC+AGG | 0.428818 | 5_3:-66705491 | None:intergenic |
| TTGCAGGCGCTGCTGAAGTC+TGG | 0.435502 | 5_3:-66704944 | None:intergenic |
| GCAATCAGAGCCTAAGAAAC+AGG | 0.437003 | 5_3:+66705502 | Msa0826350:CDS |
| ACATTAATTGGTCCTGTAGC+CGG | 0.438110 | 5_3:+66705479 | Msa0826350:CDS |
| ACAATCAGAGCCTAAGAAAC+AGG | 0.441726 | 5_3:+66705310 | Msa0826350:CDS |
| ACAATCAGAGCCTAAGAAAC+AGG | 0.441726 | 5_3:+66705790 | Msa0826350:CDS |
| ACAATCAGAGCCTAAGAAAC+AGG | 0.441726 | 5_3:+66705886 | Msa0826350:CDS |
| GACCAATTAACGCTTGTCCT+TGG | 0.442236 | 5_3:-66705853 | None:intergenic |
| GGCTCTGATTGCTCGCCTAC+AGG | 0.444213 | 5_3:-66705233 | None:intergenic |
| AATGCCATCATTAGACTTCA+AGG | 0.445716 | 5_3:-66707370 | None:intergenic |
| GACCAATTAATGCTTGTCCT+TGG | 0.452219 | 5_3:-66705661 | None:intergenic |
| ACATATAACAAACATGTTGC+TGG | 0.455549 | 5_3:+66705962 | Msa0826350:CDS |
| GACCGATTAACGCTTGTCCT+TGG | 0.456245 | 5_3:-66705565 | None:intergenic |
| TCCTTCAATACTTCTTGTGT+CGG | 0.457555 | 5_3:-66705357 | None:intergenic |
| AGCTACACTGCACACTTGTC+CGG | 0.457647 | 5_3:+66707516 | Msa0826350:CDS |
| ATCCAAGGACAAGCGTTAAT+CGG | 0.462764 | 5_3:+66705563 | Msa0826350:CDS |
| ATCACCGTTACGCTTGAGTT+CGG | 0.470795 | 5_3:-66707406 | None:intergenic |
| ACCGACACAAGAAGTATTGA+AGG | 0.474071 | 5_3:+66705356 | Msa0826350:CDS |
| CTTCTAATATTGCCGGCTGT+TGG | 0.475497 | 5_3:+66704912 | Msa0826350:CDS |
| CTTCTAATATTGCAGGCTGT+TGG | 0.480500 | 5_3:+66704738 | Msa0826350:CDS |
| GCCGGCAATATTAGAAGCAT+TGG | 0.481716 | 5_3:-66704906 | None:intergenic |
| CATTAATTGGTCCTGTAGCC+GGG | 0.486089 | 5_3:+66705480 | Msa0826350:CDS |
| TTGCTGACTTTGGTTTGGTT+AGG | 0.492552 | 5_3:-66705035 | None:intergenic |
| CCGCAATAGGCACTTCAATT+GGG | 0.497753 | 5_3:+66707616 | Msa0826350:CDS |
| TATTGCGGTGGTGGTGGTAG+TGG | 0.498143 | 5_3:-66707601 | None:intergenic |
| AGTTTGCCTTCTGCACGTAA+TGG | 0.498221 | 5_3:+66704966 | Msa0826350:CDS |
| CTTGCAAAATTCACACCATA+CGG | 0.505040 | 5_3:-66707472 | None:intergenic |
| GACCAATTAACGCTTGACCT+TGG | 0.509177 | 5_3:-66705211 | None:intergenic |
| AGTTTGCCTTCTGTTCAGAA+TGG | 0.514605 | 5_3:+66704792 | Msa0826350:CDS |
| CATATAACAAACATGTTGCT+GGG | 0.516681 | 5_3:+66705963 | Msa0826350:CDS |
| AGGCACTTCAATTGGGCCAC+AGG | 0.517728 | 5_3:+66707623 | Msa0826350:CDS |
| GGTGATTATTTAAATTTGCA+TGG | 0.517923 | 5_3:-66707785 | None:intergenic |
| TGAAGTGCCTATTGCGGTGG+TGG | 0.518303 | 5_3:-66707610 | None:intergenic |
| CAGCATGATTATGGTCACTA+AGG | 0.520547 | 5_3:-66707806 | None:intergenic |
| TCATGCTGCTATGGTGAAGA+AGG | 0.523999 | 5_3:+66707821 | Msa0826350:CDS |
| ATAACTTCCATTATGCATTG+AGG | 0.534436 | 5_3:+66708035 | Msa0826350:three_prime_UTR |
| GGCATACCATTCTGCGCAGA+AGG | 0.536308 | 5_3:-66704885 | None:intergenic |
| GCTGCTATGGTGAAGAAGGC+AGG | 0.537781 | 5_3:+66707825 | Msa0826350:CDS |
| CCAAAAGTCGGTGTTGGCAG+CGG | 0.541495 | 5_3:+66707576 | Msa0826350:CDS |
| ACAATCAGAGCCTAAGAAGC+AGG | 0.543600 | 5_3:+66705406 | Msa0826350:CDS |
| AAAAGCTGCTAAGAAAATCA+AGG | 0.554241 | 5_3:+66707440 | Msa0826350:CDS |
| TGGGAGAAAGCATGCTGCTA+AGG | 0.554649 | 5_3:+66705982 | Msa0826350:CDS |
| AAACGTAAAGCTGTGGAAAG+AGG | 0.559914 | 5_3:+66707708 | Msa0826350:CDS |
| ATGCAGTATGTCATTGCTAT+CGG | 0.563604 | 5_3:+66707919 | Msa0826350:three_prime_UTR |
| GTCATTGTGTCATCTAGACT+TGG | 0.565209 | 5_3:+66707874 | Msa0826350:three_prime_UTR |
| AAGAAGGCAGGGTTAATCAC+TGG | 0.566902 | 5_3:+66707837 | Msa0826350:CDS |
| GTCGGTTTGTACATTCTCAA+CGG | 0.567858 | 5_3:-66705339 | None:intergenic |
| TGACCATAATCATGCTGCTA+TGG | 0.569530 | 5_3:+66707812 | Msa0826350:CDS |
| GGAATACCATTCTGAACAGA+AGG | 0.573481 | 5_3:-66704798 | None:intergenic |
| ATGTACAAACTGACACAAGT+AGG | 0.574657 | 5_3:+66705540 | Msa0826350:CDS |
| AGTGCCTATTGCGGTGGTGG+TGG | 0.576879 | 5_3:-66707607 | None:intergenic |
| AGTTTGCCTTCTGCGCAGAA+TGG | 0.578105 | 5_3:+66704879 | Msa0826350:CDS |
| GTGTCATCTAGACTTGGAGT+TGG | 0.579578 | 5_3:+66707880 | Msa0826350:three_prime_UTR |
| TCAAATCCAAAAGTCGGTGT+TGG | 0.581990 | 5_3:+66707570 | Msa0826350:CDS |
| TCAAGGTTGCTGAATCCGTA+TGG | 0.584221 | 5_3:+66707457 | Msa0826350:CDS |
| AAACAGGTTGATAGTATACA+AGG | 0.585879 | 5_3:+66705260 | Msa0826350:CDS |
| GTTGCCTTGAAGTCTAATGA+TGG | 0.591860 | 5_3:+66707366 | Msa0826350:CDS |
| ACATGCAATGTTGTATGCGT+TGG | 0.594466 | 5_3:+66705932 | Msa0826350:CDS |
| GCAGGGTTAATCACTGGTTG+AGG | 0.595222 | 5_3:+66707843 | Msa0826350:CDS |
| CTGCTATGGTGAAGAAGGCA+GGG | 0.602051 | 5_3:+66707826 | Msa0826350:CDS |
| GACAGAGAAACGTAAAGCTG+TGG | 0.602727 | 5_3:+66707701 | Msa0826350:CDS |
| CAGGAACCATTACGTGCAGA+AGG | 0.603247 | 5_3:-66704972 | None:intergenic |
| CAAGCGTTAATTGGTCCTGT+AGG | 0.605906 | 5_3:+66705218 | Msa0826350:CDS |
| TTGAAGTCTAATGATGGCAT+TGG | 0.606462 | 5_3:+66707372 | Msa0826350:CDS |
| ACTGACACAAGTAGTATCCA+AGG | 0.607332 | 5_3:+66705452 | Msa0826350:CDS |
| ACTGACACAAGTAGTATCCA+AGG | 0.607332 | 5_3:+66705644 | Msa0826350:CDS |
| ACTGACACAAGTAGTATCCA+AGG | 0.612630 | 5_3:+66705194 | Msa0826350:CDS |
| TGGTGTGATGAACCAACAGC+CGG | 0.618587 | 5_3:-66704924 | None:intergenic |
| ACTAACTCAAGTAATATCCA+AGG | 0.626304 | 5_3:+66705836 | Msa0826350:CDS |
| TTCAGATAAACCGAAAACAA+AGG | 0.627362 | 5_3:+66707656 | Msa0826350:CDS |
| ACTGACACAAGTAGGATCCA+AGG | 0.632167 | 5_3:+66705548 | Msa0826350:CDS |
| CCCAATTGAAGTGCCTATTG+CGG | 0.632472 | 5_3:-66707616 | None:intergenic |
| AAACTGTCAAATCCAAAAGT+CGG | 0.636332 | 5_3:+66707564 | Msa0826350:CDS |
| TAAGAAACACTTGAAGAACA+TGG | 0.658000 | 5_3:+66707539 | Msa0826350:CDS |
| AACACAAGAAGAATTTGCAA+CGG | 0.663613 | 5_3:+66705132 | Msa0826350:CDS |
| AATTGAAGTGCCTATTGCGG+TGG | 0.664606 | 5_3:-66707613 | None:intergenic |
| ATTGCCGAACTCAAGCGTAA+CGG | 0.670672 | 5_3:+66707402 | Msa0826350:CDS |
| AGATAAACCGAAAACAAAGG+AGG | 0.682827 | 5_3:+66707659 | Msa0826350:CDS |
| ATTGTGCACTTTATGCAATG+TGG | 0.685678 | 5_3:+66707752 | Msa0826350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTTTTATCTTGAT+TGG | + | chr5_3:66706213-66706232 | Msa0826350:intron | 10.0% |
| !!! | TTTTTCTTTATTTATTTTGC+TGG | + | chr5_3:66706828-66706847 | Msa0826350:intron | 15.0% |
| !! | TTCAAAGATTATATATAGTT+TGG | - | chr5_3:66706917-66706936 | None:intergenic | 15.0% |
| !!! | TATGTAAAAATATAGTCTTT+TGG | + | chr5_3:66707004-66707023 | Msa0826350:intron | 15.0% |
| !! | AAAAAATATTTGATTGTTCA+AGG | - | chr5_3:66707146-66707165 | None:intergenic | 15.0% |
| !! | GTAAAAGTAATCATTAACTA+CGG | - | chr5_3:66706079-66706098 | None:intergenic | 20.0% |
| !!! | TTTTATTTTCATGTAAGACA+TGG | - | chr5_3:66706161-66706180 | None:intergenic | 20.0% |
| !!! | TGAATATTTTGTATAACTGT+GGG | + | chr5_3:66706325-66706344 | Msa0826350:intron | 20.0% |
| !!! | ATAAGGAAAAAATTGTTGTT+CGG | + | chr5_3:66706511-66706530 | Msa0826350:intron | 20.0% |
| !! | ATGATAATACAACAAATACT+TGG | - | chr5_3:66707266-66707285 | None:intergenic | 20.0% |
| !! | AAGTTTCTCTAATAAGTAAA+AGG | - | chr5_3:66707974-66707993 | None:intergenic | 20.0% |
| !!! | TTACATGCATTTTAGCTAAA+TGG | - | chr5_3:66706291-66706310 | None:intergenic | 25.0% |
| ! | ATTTAGCTAAAATGCATGTA+AGG | + | chr5_3:66706290-66706309 | Msa0826350:intron | 25.0% |
| !! | GTGAATATTTTGTATAACTG+TGG | + | chr5_3:66706324-66706343 | Msa0826350:intron | 25.0% |
| ! | GTATGAAAATAAGAGAATCT+TGG | - | chr5_3:66706430-66706449 | None:intergenic | 25.0% |
| !! | TAAGGAAAAAATTGTTGTTC+GGG | + | chr5_3:66706512-66706531 | Msa0826350:intron | 25.0% |
| ! | AGATTATATATAGTTTGGCA+TGG | - | chr5_3:66706912-66706931 | None:intergenic | 25.0% |
| ! | TTACATAACTGAACTAGTAA+TGG | - | chr5_3:66706991-66707010 | None:intergenic | 25.0% |
| ! | ACTCAGAAACATTTCATAAA+TGG | - | chr5_3:66707323-66707342 | None:intergenic | 25.0% |
| ! | GGTGATTATTTAAATTTGCA+TGG | - | chr5_3:66707788-66707807 | None:intergenic | 25.0% |
| AACACAAGAAGAATTTGCAA+CGG | + | chr5_3:66705132-66705151 | Msa0826350:CDS | 30.0% | |
| ! | ATACTATCAACCTGTTTCTT+AGG | - | chr5_3:66705257-66705276 | None:intergenic | 30.0% |
| !! | AAACAGGTTGATAGTATACA+AGG | + | chr5_3:66705260-66705279 | Msa0826350:CDS | 30.0% |
| ATCCAAGGACAAACATTAAT+TGG | + | chr5_3:66705467-66705486 | Msa0826350:CDS | 30.0% | |
| !!! | TTTTTTAGGCTCTGATTGTT+CGG | - | chr5_3:66705597-66705616 | None:intergenic | 30.0% |
| !!! | ACAGAATCAACCTGTTTTTT+AGG | - | chr5_3:66705611-66705630 | None:intergenic | 30.0% |
| ACTAACTCAAGTAATATCCA+AGG | + | chr5_3:66705836-66705855 | Msa0826350:CDS | 30.0% | |
| ACATATAACAAACATGTTGC+TGG | + | chr5_3:66705962-66705981 | Msa0826350:CDS | 30.0% | |
| CATATAACAAACATGTTGCT+GGG | + | chr5_3:66705963-66705982 | Msa0826350:CDS | 30.0% | |
| GACAGAACAAGAACATTAAA+AGG | + | chr5_3:66706188-66706207 | Msa0826350:intron | 30.0% | |
| GTTTAGCTAATTAACTCTGT+AGG | + | chr5_3:66706265-66706284 | Msa0826350:intron | 30.0% | |
| ! | TTGTAGCTTTTGCAAAATCA+GGG | - | chr5_3:66706374-66706393 | None:intergenic | 30.0% |
| ! | TTTGTAGCTTTTGCAAAATC+AGG | - | chr5_3:66706375-66706394 | None:intergenic | 30.0% |
| GAAAATAAGAGAATCTTGGT+GGG | - | chr5_3:66706426-66706445 | None:intergenic | 30.0% | |
| TGAAAATAAGAGAATCTTGG+TGG | - | chr5_3:66706427-66706446 | None:intergenic | 30.0% | |
| !! | GTATTCTAGTTCAAACTAGT+TGG | + | chr5_3:66706456-66706475 | Msa0826350:intron | 30.0% |
| GGAAAAAGTAACTGGAAATA+AGG | + | chr5_3:66706494-66706513 | Msa0826350:intron | 30.0% | |
| ATGAGTTTAGTGTTGTGTTT+CGG | + | chr5_3:66706583-66706602 | Msa0826350:intron | 30.0% | |
| ! | AATAGTCTTTTTCCACTAGA+AGG | + | chr5_3:66706766-66706785 | Msa0826350:intron | 30.0% |
| ACATCATTAAATCCTTCTAG+TGG | - | chr5_3:66706781-66706800 | None:intergenic | 30.0% | |
| AACCTAATATATGACCATAC+AGG | + | chr5_3:66707053-66707072 | Msa0826350:intron | 30.0% | |
| TTCCTGTATGGTCATATATT+AGG | - | chr5_3:66707058-66707077 | None:intergenic | 30.0% | |
| AAAACTAGTGTTGTCAATTG+TGG | - | chr5_3:66707173-66707192 | None:intergenic | 30.0% | |
| CTATCTATAGATATACATCC+AGG | - | chr5_3:66707236-66707255 | None:intergenic | 30.0% | |
| ! | TGAACTGCAAGAAAAGTATA+AGG | + | chr5_3:66707290-66707309 | Msa0826350:intron | 30.0% |
| AAAAGCTGCTAAGAAAATCA+AGG | + | chr5_3:66707440-66707459 | Msa0826350:CDS | 30.0% | |
| TAAGAAACACTTGAAGAACA+TGG | + | chr5_3:66707539-66707558 | Msa0826350:CDS | 30.0% | |
| AAACTGTCAAATCCAAAAGT+CGG | + | chr5_3:66707564-66707583 | Msa0826350:CDS | 30.0% | |
| TTCAGATAAACCGAAAACAA+AGG | + | chr5_3:66707656-66707675 | Msa0826350:CDS | 30.0% | |
| ! | CTGTTTCATTGTTTGTGTTT+TGG | + | chr5_3:66707998-66708017 | Msa0826350:three_prime_UTR | 30.0% |
| ATAACTTCCATTATGCATTG+AGG | + | chr5_3:66708035-66708054 | Msa0826350:three_prime_UTR | 30.0% | |
| TTGTAAACCTCAATGCATAA+TGG | - | chr5_3:66708045-66708064 | None:intergenic | 30.0% | |
| GACTGCAAAATTACAAGCAT+TGG | - | chr5_3:66704822-66704841 | None:intergenic | 35.0% | |
| TCCTGGCAACTTCAAATTTA+TGG | + | chr5_3:66704990-66705009 | Msa0826350:CDS | 35.0% | |
| ! | TGTGCTTTTCAAAAGAGACT+TGG | - | chr5_3:66705100-66705119 | None:intergenic | 35.0% |
| !! | TCTTTTGAAAAGCACATAGC+TGG | + | chr5_3:66705104-66705123 | Msa0826350:CDS | 35.0% |
| ! | TTTCTTAGGCTCTGATTGTT+CGG | - | chr5_3:66705309-66705328 | None:intergenic | 35.0% |
| TCCTTCAATACTTCTTGTGT+CGG | - | chr5_3:66705360-66705379 | None:intergenic | 35.0% | |
| ! | TTCTTAGGCTCTGATTGTTT+GGG | - | chr5_3:66705404-66705423 | None:intergenic | 35.0% |
| ACAAAATCAACCTGCTTCTT+AGG | - | chr5_3:66705419-66705438 | None:intergenic | 35.0% | |
| GACCAATTAATGTTTGTCCT+TGG | - | chr5_3:66705472-66705491 | None:intergenic | 35.0% | |
| ! | ACAGAATCAACCTGTTTCTT+AGG | - | chr5_3:66705515-66705534 | None:intergenic | 35.0% |
| ATGTACAAACTGACACAAGT+AGG | + | chr5_3:66705444-66705463 | Msa0826350:CDS | 35.0% | |
| ACAATCAGAGCCTAAAAAAC+AGG | + | chr5_3:66705598-66705617 | Msa0826350:CDS | 35.0% | |
| ATCCAAGGACAAGCATTAAT+TGG | + | chr5_3:66705659-66705678 | Msa0826350:CDS | 35.0% | |
| ! | TTTCTTAGGCTCTGATTGTT+TGG | - | chr5_3:66705309-66705328 | None:intergenic | 35.0% |
| ! | ACAGAATCAACCTGTTTCTT+AGG | - | chr5_3:66705515-66705534 | None:intergenic | 35.0% |
| ATCCAATCACAAGCCTTAAT+TGG | + | chr5_3:66705755-66705774 | Msa0826350:CDS | 35.0% | |
| ! | TTTCTTAGGCTCTGATTGTT+CGG | - | chr5_3:66705309-66705328 | None:intergenic | 35.0% |
| ! | ACAGAATCAACCTGTTTCTT+AGG | - | chr5_3:66705515-66705534 | None:intergenic | 35.0% |
| ! | TTTCTTAGGCTCTGATTGTT+CGG | - | chr5_3:66705309-66705328 | None:intergenic | 35.0% |
| ! | ACAGAATCAACCTGTTTCTT+AGG | - | chr5_3:66705515-66705534 | None:intergenic | 35.0% |
| !! | GAAACAGGTTGATTCTGTTA+AGG | + | chr5_3:66705517-66705536 | Msa0826350:CDS | 35.0% |
| GTTGCATGTAAGCTTACAAA+AGG | - | chr5_3:66706022-66706041 | None:intergenic | 35.0% | |
| TTATCTTGATTGGACACACA+AGG | + | chr5_3:66706223-66706242 | Msa0826350:intron | 35.0% | |
| AGTGCTTTGCAAAATCATAG+TGG | + | chr5_3:66706394-66706413 | Msa0826350:intron | 35.0% | |
| !!! | ATAAGTGGGAGGATTTTTTG+AGG | + | chr5_3:66706552-66706571 | Msa0826350:intron | 35.0% |
| AATACCTCTGTAGTTAACAG+AGG | - | chr5_3:66706737-66706756 | None:intergenic | 35.0% | |
| GAGTTCTATCATTTCCTGTA+TGG | - | chr5_3:66707070-66707089 | None:intergenic | 35.0% | |
| !! | TTGTTTGCTATCAGTTATCC+TGG | + | chr5_3:66707215-66707234 | Msa0826350:intron | 35.0% |
| ! | ACTGCAAGAAAAGTATAAGG+CGG | + | chr5_3:66707293-66707312 | Msa0826350:intron | 35.0% |
| AACCTATGAGTCACAAAAAG+TGG | - | chr5_3:66707349-66707368 | None:intergenic | 35.0% | |
| AATGCCATCATTAGACTTCA+AGG | - | chr5_3:66707373-66707392 | None:intergenic | 35.0% | |
| TTGAAGTCTAATGATGGCAT+TGG | + | chr5_3:66707372-66707391 | Msa0826350:CDS | 35.0% | |
| CTTGCAAAATTCACACCATA+CGG | - | chr5_3:66707475-66707494 | None:intergenic | 35.0% | |
| GTTCTTCAAGTGTTTCTTAC+CGG | - | chr5_3:66707538-66707557 | None:intergenic | 35.0% | |
| ! | GTTTTCGGTTTATCTGAATC+TGG | - | chr5_3:66707654-66707673 | None:intergenic | 35.0% |
| AGATAAACCGAAAACAAAGG+AGG | + | chr5_3:66707659-66707678 | Msa0826350:CDS | 35.0% | |
| !!! | ACTGATACCTCCTTTGTTTT+CGG | - | chr5_3:66707669-66707688 | None:intergenic | 35.0% |
| ATTGTGCACTTTATGCAATG+TGG | + | chr5_3:66707752-66707771 | Msa0826350:CDS | 35.0% | |
| ATGCAGTATGTCATTGCTAT+CGG | + | chr5_3:66707919-66707938 | Msa0826350:three_prime_UTR | 35.0% | |
| CTTCTAATATTGCAGGCTGT+TGG | + | chr5_3:66704738-66704757 | Msa0826350:CDS | 40.0% | |
| AGTTTGCCTTCTGTTCAGAA+TGG | + | chr5_3:66704792-66704811 | Msa0826350:CDS | 40.0% | |
| GGAATACCATTCTGAACAGA+AGG | - | chr5_3:66704801-66704820 | None:intergenic | 40.0% | |
| ! | CTTGTAATTTTGCAGTCTGC+TGG | + | chr5_3:66704825-66704844 | Msa0826350:CDS | 40.0% |
| GCCAATGCTTCTAATATTGC+CGG | + | chr5_3:66704905-66704924 | Msa0826350:CDS | 40.0% | |
| ! | GCCATAAATTTGAAGTTGCC+AGG | - | chr5_3:66704994-66705013 | None:intergenic | 40.0% |
| !! | TTGCTGACTTTGGTTTGGTT+AGG | - | chr5_3:66705038-66705057 | None:intergenic | 40.0% |
| !! | AAGCTTTGCTGACTTTGGTT+TGG | - | chr5_3:66705043-66705062 | None:intergenic | 40.0% |
| !! | TCTGAAAGCTTTGCTGACTT+TGG | - | chr5_3:66705048-66705067 | None:intergenic | 40.0% |
| TTCGCATGAGATGCAATTGT+AGG | - | chr5_3:66705167-66705186 | None:intergenic | 40.0% | |
| ACTGACACAAGTAGTATCCA+AGG | + | chr5_3:66705194-66705213 | Msa0826350:CDS | 40.0% | |
| ATCCAAGGTCAAGCGTTAAT+TGG | + | chr5_3:66705209-66705228 | Msa0826350:CDS | 40.0% | |
| ACAATCAGAGCCTAAGAAAC+AGG | + | chr5_3:66705310-66705329 | Msa0826350:CDS | 40.0% | |
| ! | ACGGAATCAACCTGTTTCTT+AGG | - | chr5_3:66705323-66705342 | None:intergenic | 40.0% |
| !! | GTCGGTTTGTACATTCTCAA+CGG | - | chr5_3:66705342-66705361 | None:intergenic | 40.0% |
| !! | ACCGACACAAGAAGTATTGA+AGG | + | chr5_3:66705356-66705375 | Msa0826350:CDS | 40.0% |
| ! | CTTCTTAGGCTCTGATTGTT+TGG | - | chr5_3:66705405-66705424 | None:intergenic | 40.0% |
| ACTGACACAAGTAGTATCCA+AGG | + | chr5_3:66705194-66705213 | Msa0826350:CDS | 40.0% | |
| ACATTAATTGGTCCTGTAGC+CGG | + | chr5_3:66705479-66705498 | Msa0826350:CDS | 40.0% | |
| ATCCAAGGACAAGCGTTAAT+CGG | + | chr5_3:66705563-66705582 | Msa0826350:CDS | 40.0% | |
| ACTGACACAAGTAGTATCCA+AGG | + | chr5_3:66705194-66705213 | Msa0826350:CDS | 40.0% | |
| GACCAATTAATGCTTGTCCT+TGG | - | chr5_3:66705664-66705683 | None:intergenic | 40.0% | |
| ACAATCAGAGCCTAAGAAAC+AGG | + | chr5_3:66705310-66705329 | Msa0826350:CDS | 40.0% | |
| GACCAATTAAGGCTTGTGAT+TGG | - | chr5_3:66705760-66705779 | None:intergenic | 40.0% | |
| TTCGGCTAAAGGACCAATTA+AGG | - | chr5_3:66705771-66705790 | None:intergenic | 40.0% | |
| ACAATCAGAGCCTAAGAAAC+AGG | + | chr5_3:66705310-66705329 | Msa0826350:CDS | 40.0% | |
| ATCCAAGGACAAGCGTTAAT+TGG | + | chr5_3:66705563-66705582 | Msa0826350:CDS | 40.0% | |
| ACAATCAGAGCCTAAGAAAC+AGG | + | chr5_3:66705310-66705329 | Msa0826350:CDS | 40.0% | |
| ACATGCAATGTTGTATGCGT+TGG | + | chr5_3:66705932-66705951 | Msa0826350:CDS | 40.0% | |
| ATCCACTGGGAAAAAGTAAC+TGG | + | chr5_3:66706486-66706505 | Msa0826350:intron | 40.0% | |
| !!! | TTCCAGTTACTTTTTCCCAG+TGG | - | chr5_3:66706491-66706510 | None:intergenic | 40.0% |
| TCGTTTCATGGTCAAATTGC+AGG | - | chr5_3:66706618-66706637 | None:intergenic | 40.0% | |
| TCAACGTTACAGTCGTTTCA+TGG | - | chr5_3:66706630-66706649 | None:intergenic | 40.0% | |
| GCTAGGTTCTACTGAAATCA+GGG | - | chr5_3:66706673-66706692 | None:intergenic | 40.0% | |
| AGCTAGGTTCTACTGAAATC+AGG | - | chr5_3:66706674-66706693 | None:intergenic | 40.0% | |
| ! | CTGCAAGAAAAGTATAAGGC+GGG | + | chr5_3:66707294-66707313 | Msa0826350:intron | 40.0% |
| ! | TGCAAGAAAAGTATAAGGCG+GGG | + | chr5_3:66707295-66707314 | Msa0826350:intron | 40.0% |
| !!! | GACCACTTTTTGTGACTCAT+AGG | + | chr5_3:66707344-66707363 | Msa0826350:intron | 40.0% |
| GTTGCCTTGAAGTCTAATGA+TGG | + | chr5_3:66707366-66707385 | Msa0826350:CDS | 40.0% | |
| TCAAATCCAAAAGTCGGTGT+TGG | + | chr5_3:66707570-66707589 | Msa0826350:CDS | 40.0% | |
| AAACGTAAAGCTGTGGAAAG+AGG | + | chr5_3:66707708-66707727 | Msa0826350:CDS | 40.0% | |
| CAGCATGATTATGGTCACTA+AGG | - | chr5_3:66707809-66707828 | None:intergenic | 40.0% | |
| TGACCATAATCATGCTGCTA+TGG | + | chr5_3:66707812-66707831 | Msa0826350:CDS | 40.0% | |
| TCACCATAGCAGCATGATTA+TGG | - | chr5_3:66707818-66707837 | None:intergenic | 40.0% | |
| GTCATTGTGTCATCTAGACT+TGG | + | chr5_3:66707874-66707893 | Msa0826350:three_prime_UTR | 40.0% | |
| TGAACAGAAGGCAAACTTGC+AGG | - | chr5_3:66704789-66704808 | None:intergenic | 45.0% | |
| ! | GCCGGCAATATTAGAAGCAT+TGG | - | chr5_3:66704909-66704928 | None:intergenic | 45.0% |
| ! | CTTCTAATATTGCCGGCTGT+TGG | + | chr5_3:66704912-66704931 | Msa0826350:CDS | 45.0% |
| AGTTTGCCTTCTGCACGTAA+TGG | + | chr5_3:66704966-66704985 | Msa0826350:CDS | 45.0% | |
| GACCAATTAACGCTTGACCT+TGG | - | chr5_3:66705214-66705233 | None:intergenic | 45.0% | |
| CAAGCGTTAATTGGTCCTGT+AGG | + | chr5_3:66705218-66705237 | Msa0826350:CDS | 45.0% | |
| GCAATCAGAGCCTAAGAAAC+AGG | + | chr5_3:66705244-66705263 | Msa0826350:CDS | 45.0% | |
| ACAATCAGAGCCTAAGAAGC+AGG | + | chr5_3:66705406-66705425 | Msa0826350:CDS | 45.0% | |
| CATTAATTGGTCCTGTAGCC+GGG | + | chr5_3:66705480-66705499 | Msa0826350:CDS | 45.0% | |
| ! | TTTCTTAGGCTCTGATTGCC+CGG | - | chr5_3:66705501-66705520 | None:intergenic | 45.0% |
| GCAATCAGAGCCTAAGAAAC+AGG | + | chr5_3:66705244-66705263 | Msa0826350:CDS | 45.0% | |
| ACTGACACAAGTAGGATCCA+AGG | + | chr5_3:66705548-66705567 | Msa0826350:CDS | 45.0% | |
| GACCAATTAACGCTTGTCCT+TGG | - | chr5_3:66705856-66705875 | None:intergenic | 45.0% | |
| CCACTAGTGTGCATTATGTG+TGG | - | chr5_3:66706109-66706128 | None:intergenic | 45.0% | |
| CCACACATAATGCACACTAG+TGG | + | chr5_3:66706106-66706125 | Msa0826350:intron | 45.0% | |
| TTGGACACACAAGGCAAGAT+AGG | + | chr5_3:66706232-66706251 | Msa0826350:intron | 45.0% | |
| AAGGCAAGATAGGATCACTG+TGG | + | chr5_3:66706242-66706261 | Msa0826350:intron | 45.0% | |
| AGGCAAGATAGGATCACTGT+GGG | + | chr5_3:66706243-66706262 | Msa0826350:intron | 45.0% | |
| !! | CTGTGGGTTTGCTGAAATCT+CGG | + | chr5_3:66706341-66706360 | Msa0826350:intron | 45.0% |
| ! | TAGTTGGCTTACTCATCCAC+TGG | + | chr5_3:66706472-66706491 | Msa0826350:intron | 45.0% |
| ! | AGTTGGCTTACTCATCCACT+GGG | + | chr5_3:66706473-66706492 | Msa0826350:intron | 45.0% |
| ATGTAGACAGCGGCAATAAG+TGG | + | chr5_3:66706537-66706556 | Msa0826350:intron | 45.0% | |
| TGTAGACAGCGGCAATAAGT+GGG | + | chr5_3:66706538-66706557 | Msa0826350:intron | 45.0% | |
| AATACTGTGGCATGACGTAG+CGG | - | chr5_3:66706698-66706717 | None:intergenic | 45.0% | |
| TTGCGGACGCTATAATACTG+TGG | - | chr5_3:66706711-66706730 | None:intergenic | 45.0% | |
| GTAGTTAACAGAGGCTGTTG+CGG | - | chr5_3:66706728-66706747 | None:intergenic | 45.0% | |
| ACAGCCTCTGTTAACTACAG+AGG | + | chr5_3:66706730-66706749 | Msa0826350:intron | 45.0% | |
| ATTGCCGAACTCAAGCGTAA+CGG | + | chr5_3:66707402-66707421 | Msa0826350:CDS | 45.0% | |
| ATCACCGTTACGCTTGAGTT+CGG | - | chr5_3:66707409-66707428 | None:intergenic | 45.0% | |
| TCAAGGTTGCTGAATCCGTA+TGG | + | chr5_3:66707457-66707476 | Msa0826350:CDS | 45.0% | |
| ! | AATTGAAGTGCCTATTGCGG+TGG | - | chr5_3:66707616-66707635 | None:intergenic | 45.0% |
| ACCGCAATAGGCACTTCAAT+TGG | + | chr5_3:66707615-66707634 | Msa0826350:CDS | 45.0% | |
| ! | CCCAATTGAAGTGCCTATTG+CGG | - | chr5_3:66707619-66707638 | None:intergenic | 45.0% |
| CCGCAATAGGCACTTCAATT+GGG | + | chr5_3:66707616-66707635 | Msa0826350:CDS | 45.0% | |
| !!! | TCTGAATCTGGCTTTTCCTG+TGG | - | chr5_3:66707642-66707661 | None:intergenic | 45.0% |
| GACAGAGAAACGTAAAGCTG+TGG | + | chr5_3:66707701-66707720 | Msa0826350:CDS | 45.0% | |
| TCATGCTGCTATGGTGAAGA+AGG | + | chr5_3:66707821-66707840 | Msa0826350:CDS | 45.0% | |
| AAGAAGGCAGGGTTAATCAC+TGG | + | chr5_3:66707837-66707856 | Msa0826350:CDS | 45.0% | |
| GTGTCATCTAGACTTGGAGT+TGG | + | chr5_3:66707880-66707899 | Msa0826350:three_prime_UTR | 45.0% | |
| AGTTTGCCTTCTGCGCAGAA+TGG | + | chr5_3:66704879-66704898 | Msa0826350:CDS | 50.0% | |
| TGGTGTGATGAACCAACAGC+CGG | - | chr5_3:66704927-66704946 | None:intergenic | 50.0% | |
| CAGGAACCATTACGTGCAGA+AGG | - | chr5_3:66704975-66704994 | None:intergenic | 50.0% | |
| CTTCTGCACGTAATGGTTCC+TGG | + | chr5_3:66704973-66704992 | Msa0826350:CDS | 50.0% | |
| GACCGATTAACGCTTGTCCT+TGG | - | chr5_3:66705568-66705587 | None:intergenic | 50.0% | |
| ! | GGCTCTGATTGTTCGGCTAA+AGG | - | chr5_3:66705782-66705801 | None:intergenic | 50.0% |
| ! | GGCTCTGATTGTTCGGCTAT+AGG | - | chr5_3:66705878-66705897 | None:intergenic | 50.0% |
| ! | TGGGAGAAAGCATGCTGCTA+AGG | + | chr5_3:66705982-66706001 | Msa0826350:CDS | 50.0% |
| TGTTCGGGAGATGTAGACAG+CGG | + | chr5_3:66706527-66706546 | Msa0826350:intron | 50.0% | |
| ! | GACTGTAACGTTGACTGCCA+CGG | + | chr5_3:66706636-66706655 | Msa0826350:intron | 50.0% |
| ! | ACTGTAACGTTGACTGCCAC+GGG | + | chr5_3:66706637-66706656 | Msa0826350:intron | 50.0% |
| CGCTTGAGTTCGGCAATAGA+TGG | - | chr5_3:66707399-66707418 | None:intergenic | 50.0% | |
| AGCTACACTGCACACTTGTC+CGG | + | chr5_3:66707516-66707535 | Msa0826350:CDS | 50.0% | |
| CTGCTATGGTGAAGAAGGCA+GGG | + | chr5_3:66707826-66707845 | Msa0826350:CDS | 50.0% | |
| ! | GCAGGGTTAATCACTGGTTG+AGG | + | chr5_3:66707843-66707862 | Msa0826350:CDS | 50.0% |
| TGCGCAGAAGGCAAACTTGC+AGG | - | chr5_3:66704876-66704895 | None:intergenic | 55.0% | |
| GGCATACCATTCTGCGCAGA+AGG | - | chr5_3:66704888-66704907 | None:intergenic | 55.0% | |
| CGTGCAGAAGGCAAACTTGC+AGG | - | chr5_3:66704963-66704982 | None:intergenic | 55.0% | |
| ! | GGCTCTGATTGTTCGGCTAC+AGG | - | chr5_3:66705302-66705321 | None:intergenic | 55.0% |
| ! | GGCTCTGATTGTTCGGCTAC+AGG | - | chr5_3:66705302-66705321 | None:intergenic | 55.0% |
| AGACAGCGGCAATAAGTGGG+AGG | + | chr5_3:66706541-66706560 | Msa0826350:intron | 55.0% | |
| !! | CCAAAAGTCGGTGTTGGCAG+CGG | + | chr5_3:66707576-66707595 | Msa0826350:CDS | 55.0% |
| !! | TATTGCGGTGGTGGTGGTAG+TGG | - | chr5_3:66707604-66707623 | None:intergenic | 55.0% |
| ACTACCACCACCACCGCAAT+AGG | + | chr5_3:66707603-66707622 | Msa0826350:CDS | 55.0% | |
| ! | TGAAGTGCCTATTGCGGTGG+TGG | - | chr5_3:66707613-66707632 | None:intergenic | 55.0% |
| AGGCACTTCAATTGGGCCAC+AGG | + | chr5_3:66707623-66707642 | Msa0826350:CDS | 55.0% | |
| GCTGCTATGGTGAAGAAGGC+AGG | + | chr5_3:66707825-66707844 | Msa0826350:CDS | 55.0% | |
| ! | TTGCAGGCGCTGCTGAAGTC+TGG | - | chr5_3:66704860-66704879 | None:intergenic | 60.0% |
| ! | GGCTCTGATTGCTCGCCTAC+AGG | - | chr5_3:66705236-66705255 | None:intergenic | 60.0% |
| GGCATGACGTAGCGGTAGCT+AGG | - | chr5_3:66706690-66706709 | None:intergenic | 60.0% | |
| !!! | CCGCTGCCAACACCGACTTT+TGG | - | chr5_3:66707579-66707598 | None:intergenic | 60.0% |
| ! | AGTGCCTATTGCGGTGGTGG+TGG | - | chr5_3:66707610-66707629 | None:intergenic | 60.0% |
| ! | GGCTCTGATTGCCCGGCTAC+AGG | - | chr5_3:66705494-66705513 | None:intergenic | 65.0% |
| TCAGGGCAGCGCAGTGCCCG+TGG | - | chr5_3:66706656-66706675 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 66704735 | 66708077 | 66704735 | ID=Msa0826350;Name=Msa0826350 |
| chr5_3 | mRNA | 66704735 | 66708077 | 66704735 | ID=Msa0826350-mRNA-1;Parent=Msa0826350;Name=Msa0826350-mRNA-1;_AED=0.01;_eAED=0.02;_QI=0|1|0.5|1|1|1|2|214|588 |
| chr5_3 | exon | 66704735 | 66706003 | 66704735 | ID=Msa0826350-mRNA-1:exon:20922;Parent=Msa0826350-mRNA-1 |
| chr5_3 | exon | 66707366 | 66708077 | 66707366 | ID=Msa0826350-mRNA-1:exon:20923;Parent=Msa0826350-mRNA-1 |
| chr5_3 | CDS | 66704735 | 66706003 | 66704735 | ID=Msa0826350-mRNA-1:cds;Parent=Msa0826350-mRNA-1 |
| chr5_3 | CDS | 66707366 | 66707863 | 66707366 | ID=Msa0826350-mRNA-1:cds;Parent=Msa0826350-mRNA-1 |
| chr5_3 | three_prime_UTR | 66707864 | 66708077 | 66707864 | ID=Msa0826350-mRNA-1:three_prime_utr;Parent=Msa0826350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
