AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0829390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0829390 MtrunA17_Chr8g0390211 92.527 455 3 1 1 455 1 424 0.0 860
Msa0829390 MtrunA17_Chr6g0486611 74.617 457 81 5 1 455 1 424 0.0 687
Msa0829390 MtrunA17_Chr4g0071031 63.520 392 110 3 1 391 1 360 1.37e-176 502
Msa0829390 MtrunA17_Chr3g0140071 56.652 466 155 5 1 455 1 430 1.14e-175 499
Msa0829390 MtrunA17_Chr2g0329981 59.294 425 131 6 1 416 1 392 3.29e-175 499
Msa0829390 MtrunA17_Chr1g0166821 60.238 420 127 5 1 416 2 385 3.64e-175 498
Msa0829390 MtrunA17_Chr1g0183631 69.909 329 68 1 1 329 1 298 9.10e-171 487
Msa0829390 MtrunA17_Chr1g0146151 54.664 461 161 6 1 453 1 421 4.26e-170 484
Msa0829390 MtrunA17_Chr1g0187571 60.442 407 113 6 1 397 2 370 6.39e-170 485
Msa0829390 MtrunA17_Chr8g0342821 69.697 330 68 2 1 330 1 298 3.67e-169 484
Msa0829390 MtrunA17_Chr7g0261501 68.598 328 72 1 1 328 1 297 1.93e-167 479
Msa0829390 MtrunA17_Chr2g0299661 53.911 473 158 7 1 454 1 432 1.79e-166 477
Msa0829390 MtrunA17_Chr1g0167261 56.623 385 116 4 1 383 2 337 1.84e-150 431
Msa0829390 MtrunA17_Chr7g0214531 35.759 316 170 9 2 309 27 317 1.64e-52 186
Msa0829390 MtrunA17_Chr1g0213321 34.810 316 168 7 2 309 109 394 1.22e-51 185
Msa0829390 MtrunA17_Chr7g0253211 35.873 315 168 8 2 308 314 602 2.39e-49 180
Msa0829390 MtrunA17_Chr3g0140431 35.179 307 161 7 5 304 32 307 4.04e-49 177
Msa0829390 MtrunA17_Chr1g0146301 33.876 307 165 7 5 304 118 393 5.06e-49 177
Msa0829390 MtrunA17_Chr8g0340491 33.663 303 168 7 9 304 128 404 5.25e-46 169
Msa0829390 MtrunA17_Chr7g0245031 35.938 128 68 4 140 267 252 365 9.77e-14 73.2
Msa0829390 MtrunA17_Chr4g0075541 28.824 170 104 4 131 300 185 337 1.47e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0829390 AT4G28880.3 68.282 454 94 5 1 446 1 412 0.0 628
Msa0829390 AT4G28880.2 68.282 454 94 5 1 446 1 412 0.0 628
Msa0829390 AT4G28880.1 68.282 454 94 5 1 446 1 412 0.0 628
Msa0829390 AT4G28880.4 68.282 454 94 5 1 446 1 412 0.0 628
Msa0829390 AT4G28860.1 67.473 455 91 8 1 446 1 407 0.0 608
Msa0829390 AT4G28860.2 71.679 399 70 4 1 391 1 364 0.0 587
Msa0829390 AT5G57015.1 67.049 349 78 2 1 343 1 318 1.59e-172 491
Msa0829390 AT4G26100.1 64.674 368 93 4 1 364 1 335 9.61e-172 490
Msa0829390 AT1G72710.1 64.075 373 101 3 1 372 1 341 5.77e-170 486
Msa0829390 AT3G23340.1 54.767 451 163 4 1 451 1 410 2.17e-169 483
Msa0829390 AT2G19470.1 60.417 384 107 3 1 373 1 350 1.79e-168 481
Msa0829390 AT1G03930.1 67.073 328 77 1 1 328 1 297 6.75e-167 478
Msa0829390 AT5G44100.1 67.378 328 76 1 1 328 1 297 2.83e-166 477
Msa0829390 AT5G44100.2 67.378 328 76 1 1 328 1 297 2.83e-166 477
Msa0829390 AT4G28540.1 67.173 329 77 1 1 329 5 302 1.78e-165 475
Msa0829390 AT5G43320.1 53.092 469 168 6 1 450 1 436 5.17e-165 474
Msa0829390 AT1G04440.1 59.487 390 113 5 1 377 1 358 5.90e-163 468
Msa0829390 AT5G43320.2 67.683 328 75 1 1 328 1 297 1.34e-162 463
Msa0829390 AT5G43320.3 67.683 328 75 1 1 328 1 297 1.34e-162 463
Msa0829390 AT4G14340.1 53.233 464 164 8 1 454 7 427 7.76e-161 462
Msa0829390 AT4G14340.2 62.429 354 96 3 1 349 7 328 6.75e-160 456
Msa0829390 AT3G23340.2 58.270 393 154 3 59 451 14 396 2.11e-159 457
Msa0829390 AT4G08800.1 56.923 325 77 3 1 325 1 262 8.24e-130 377
Msa0829390 AT2G25760.2 36.482 307 167 6 5 304 101 386 8.29e-53 188
Msa0829390 AT3G13670.1 35.759 316 170 9 2 309 127 417 4.06e-52 187
Msa0829390 AT3G03940.1 36.508 315 166 8 2 308 130 418 2.36e-51 185
Msa0829390 AT2G25760.1 36.156 307 165 7 5 304 101 383 1.25e-50 182
Msa0829390 AT5G18190.2 35.647 317 170 8 2 310 120 410 7.98e-50 180
Msa0829390 AT5G18190.1 35.647 317 170 8 2 310 120 410 7.98e-50 180
Msa0829390 AT1G54960.1 26.562 256 140 9 9 259 68 280 2.82e-11 66.2
Msa0829390 AT1G54960.2 26.562 256 140 9 9 259 68 280 2.82e-11 66.2
Msa0829390 AT3G06030.1 26.778 239 139 7 9 244 68 273 3.70e-11 65.9

Find 254 sgRNAs with CRISPR-Local

Find 445 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGAATCTTGGATTCTTTC+TGG 0.132424 5_4:+2309028 Msa0829390:three_prime_UTR
AGCAGACAAGGCAAGGTTTA+AGG 0.159140 5_4:-2307205 None:intergenic
TAATACACAGGCAAATATTT+TGG 0.172406 5_4:+2308206 Msa0829390:three_prime_UTR
CTTGGTGCAGGTGGCATTCC+AGG 0.196530 5_4:+2304325 Msa0829390:intron
CAGGTTTACATAATTGATTT+TGG 0.206036 5_4:+2304911 Msa0829390:intron
GCCTTCCTTGGCAAGGTCTA+AGG 0.233807 5_4:+2305464 Msa0829390:intron
TTTGATCAGCGGCCTGATTA+TGG 0.242360 5_4:+2305711 Msa0829390:CDS
AACCTTAAGGATTTGAATAA+TGG 0.245148 5_4:-2309492 None:intergenic
GCTTCACATATCTATTCTTC+TGG 0.259351 5_4:-2307493 None:intergenic
CTGAAAGGTTACTGAAATAA+TGG 0.266396 5_4:+2308229 Msa0829390:three_prime_UTR
TTTGTAGTATTTCTATTTCC+AGG 0.275612 5_4:+2307450 Msa0829390:intron
TTAATTTGTGATGTCATTCT+AGG 0.278405 5_4:+2308635 Msa0829390:three_prime_UTR
CATGGGCAAGCCAGTAAAAT+TGG 0.281681 5_4:+2307246 Msa0829390:CDS
CAGGACTCTTTGGAGGCATT+TGG 0.282509 5_4:+2309719 Msa0829390:three_prime_UTR
CTTGATTTAGCATTATTCTT+TGG 0.284082 5_4:-2309772 None:intergenic
TTTATGAATGCCACTATCTA+AGG 0.287937 5_4:+2308821 Msa0829390:three_prime_UTR
AGGGAGAACAAAAGCTTAAC+AGG 0.296533 5_4:+2305132 Msa0829390:intron
ATCAATGAGTGGTTCGTTAC+TGG 0.303724 5_4:+2310121 Msa0829390:three_prime_UTR
GTCAGTCCGACAAGGTCTTT+TGG 0.308130 5_4:+2309454 Msa0829390:three_prime_UTR
TCATTTAGAAGACATCATTT+TGG 0.309143 5_4:+2308368 Msa0829390:three_prime_UTR
CGCCAAGGAAATATTAATAT+TGG 0.310948 5_4:+2308907 Msa0829390:three_prime_UTR
TCAGGAAATGCTACTGGTTC+TGG 0.311321 5_4:+2306922 Msa0829390:CDS
CATCCGATCACCCAAATAAA+AGG 0.312645 5_4:-2308319 None:intergenic
GTGGCATTCCAGGCTTAAAA+TGG 0.316285 5_4:+2304335 Msa0829390:CDS
CACGTATGTGCAGGACTCTT+TGG 0.318866 5_4:+2309709 Msa0829390:three_prime_UTR
TTCGTCCATATGCAGGGATA+TGG 0.319358 5_4:-2309245 None:intergenic
TGAAATAATGGTTTCTTGTC+AGG 0.319680 5_4:+2308241 Msa0829390:three_prime_UTR
CACTACAACTGTGATACTTA+TGG 0.320013 5_4:+2310146 Msa0829390:three_prime_UTR
AAATTCTTTGTGCTGATATA+AGG 0.323101 5_4:+2309142 Msa0829390:three_prime_UTR
CGCATCTTTCCCAAAGTGTT+TGG 0.323273 5_4:+2307533 Msa0829390:three_prime_UTR
AGCAAACATGAACAAGTAAA+AGG 0.325764 5_4:-2307991 None:intergenic
TCTTTACCACAGCCAGTTCC+TGG 0.326468 5_4:+2306537 Msa0829390:intron
GTACTTCTGTACTTCCTTAG+AGG 0.327253 5_4:+2305319 Msa0829390:CDS
CAGGTATTGAAGGCAGTTCT+TGG 0.327981 5_4:+2308260 Msa0829390:three_prime_UTR
TCCAAAGCTCATTATACTTC+AGG 0.339140 5_4:-2309317 None:intergenic
CTCCTGCTGGTACTTCAAAA+AGG 0.340286 5_4:+2307178 Msa0829390:CDS
CTGCTTCAGTGTAAGAATCT+TGG 0.345998 5_4:+2309017 Msa0829390:three_prime_UTR
ACAAGCACTTCTTTACTTGT+AGG 0.346895 5_4:+2308587 Msa0829390:three_prime_UTR
AAAATGTGAATTCAATGTTT+TGG 0.349078 5_4:-2309193 None:intergenic
TAAAATGGTTTGGCATAGAT+AGG 0.351034 5_4:+2304350 Msa0829390:CDS
CTTGCGTGTCTCCCTTTGAT+TGG 0.351287 5_4:+2309864 Msa0829390:three_prime_UTR
TTTGTTTCATGTGTGATTCA+AGG 0.353301 5_4:+2308679 Msa0829390:three_prime_UTR
GCAAAGTAGACGGGATGATT+TGG 0.359030 5_4:+2305282 Msa0829390:CDS
ATAAGTCAGCATAAGCATTC+TGG 0.359714 5_4:+2308875 Msa0829390:three_prime_UTR
TGCCATTATTCAAATCCTTA+AGG 0.361130 5_4:+2309490 Msa0829390:three_prime_UTR
TATTCTTGACCAAACACTTT+GGG 0.361434 5_4:-2307542 None:intergenic
CCTTCTATTGCATCTATCAT+TGG 0.369536 5_4:+2309936 Msa0829390:three_prime_UTR
TACCATGCTTGACATTCATT+TGG 0.370830 5_4:-2307313 None:intergenic
GAATGCCATACCTTCCTCTA+AGG 0.375079 5_4:-2305333 None:intergenic
GTGTGAAGCGTTTGTGGAAG+AGG 0.378652 5_4:-2309914 None:intergenic
GCAAGTTGCAATACTCATCT+TGG 0.379672 5_4:+2305168 Msa0829390:CDS
TGATTGCTGATACTTTAAAA+TGG 0.383962 5_4:-2306352 None:intergenic
GCAGACAAGGCAAGGTTTAA+GGG 0.391099 5_4:-2307204 None:intergenic
CGGTTACTTGCACCAGGAAC+TGG 0.392308 5_4:-2306549 None:intergenic
TTCATAAATTTCAGTGGAAA+AGG 0.395310 5_4:-2308806 None:intergenic
GTGCTTGCTATCGATTTACT+TGG 0.395396 5_4:+2304382 Msa0829390:CDS
CGCTTCAAGAATCCATAATC+AGG 0.403903 5_4:-2305723 None:intergenic
TTGATTTCAATTGGAGAGAA+AGG 0.404350 5_4:+2308983 Msa0829390:three_prime_UTR
AAGTAGTCATTGATTTCAAT+TGG 0.404935 5_4:+2308974 Msa0829390:three_prime_UTR
ATTCCAGGCTTAAAATGGTT+TGG 0.408195 5_4:+2304340 Msa0829390:CDS
CCAATCGCCACATCCCTTAC+AGG 0.410603 5_4:+2304963 Msa0829390:CDS
TACCAATATTAATATTTCCT+TGG 0.417219 5_4:-2308909 None:intergenic
AGGGATGTGGCGATTGGTTG+TGG 0.418253 5_4:-2304957 None:intergenic
AACTTATCAATAGGCGGGAC+AGG 0.419700 5_4:-2308428 None:intergenic
TCCTGAAGTATAATGAGCTT+TGG 0.420074 5_4:+2309316 Msa0829390:three_prime_UTR
AACATGTAAAGGCCTCAAAT+AGG 0.422857 5_4:-2307631 None:intergenic
CTGAAGCAGAACTTATCAAT+AGG 0.425359 5_4:-2308437 None:intergenic
CTTCACATATCTATTCTTCT+GGG 0.426663 5_4:-2307492 None:intergenic
GAGAATAATAAAATCTTGCT+TGG 0.427096 5_4:-2309615 None:intergenic
TTGAGTTAATATGACTTCAA+TGG 0.427860 5_4:+2308943 Msa0829390:three_prime_UTR
ATATTAAAGTGGTGTATTCA+TGG 0.428722 5_4:+2307562 Msa0829390:three_prime_UTR
GATGACATCCAGCTACTTGA+AGG 0.432963 5_4:-2307270 None:intergenic
TGGGCTAGCAAAACGGTATC+GGG 0.438977 5_4:+2304931 Msa0829390:CDS
TCTTCAGAACTATTTGTACT+TGG 0.440319 5_4:+2309392 Msa0829390:three_prime_UTR
TAGAAGGTGTGAAGCGTTTG+TGG 0.440495 5_4:-2309920 None:intergenic
TAATCATCAAGTAACATAAC+AGG 0.441881 5_4:-2307811 None:intergenic
CAATCCCATATCCCTGCATA+TGG 0.448507 5_4:+2309240 Msa0829390:three_prime_UTR
AAGTCCCATGAGGAAGTTAT+CGG 0.450800 5_4:-2304646 None:intergenic
CTGCGTTGGCACTTATCATA+TGG 0.451350 5_4:-2307845 None:intergenic
CTTTGTTAAATAAACTGATA+AGG 0.451623 5_4:+2309663 Msa0829390:three_prime_UTR
TGCAATACTCATCTTGGGAT+TGG 0.451960 5_4:+2305174 Msa0829390:CDS
TTGGAGGCATTTGGCACCTA+GGG 0.453148 5_4:+2309728 Msa0829390:three_prime_UTR
CAAGTTGCAATACTCATCTT+GGG 0.453718 5_4:+2305169 Msa0829390:CDS
TGCTATCCAAAAGACCTTGT+CGG 0.458409 5_4:-2309460 None:intergenic
ACTAGCACAAAACACTGATC+AGG 0.459408 5_4:-2309531 None:intergenic
AAGTATGAAGCAAACTCTAC+TGG 0.459456 5_4:-2305666 None:intergenic
CTTGAGAAAGTCTTGCAGTA+AGG 0.459586 5_4:+2309357 Msa0829390:three_prime_UTR
AAGCTCTACAATATTCTTCA+AGG 0.460096 5_4:+2304211 Msa0829390:CDS
CTCAAATATTAATGATAAGT+GGG 0.460894 5_4:+2309051 Msa0829390:three_prime_UTR
GAACCTTCCAACACTGGACA+TGG 0.461334 5_4:+2307228 Msa0829390:CDS
AATCACCTTCACGAGCAAAT+AGG 0.462598 5_4:-2305758 None:intergenic
CCTTCCTTGGCAAGGTCTAA+GGG 0.464110 5_4:+2305465 Msa0829390:CDS
TTGGGCTAGCAAAACGGTAT+CGG 0.464581 5_4:+2304930 Msa0829390:CDS
GATTGTGTTCGTCCATATGC+AGG 0.465754 5_4:-2309252 None:intergenic
ATTGAATATGTGCATTCTAA+AGG 0.468242 5_4:+2304600 Msa0829390:CDS
GACTATCCAGGCTTGGGTCC+CGG 0.471067 5_4:+2307705 Msa0829390:three_prime_UTR
GCTCAAATATTAATGATAAG+TGG 0.472758 5_4:+2309050 Msa0829390:three_prime_UTR
TTCATGCATATTCAGGGCAT+GGG 0.474995 5_4:+2306884 Msa0829390:intron
TCTGCTTCTTATGCTCCTGC+TGG 0.479546 5_4:+2307165 Msa0829390:CDS
ATCAAATATACTCACAGATA+AGG 0.481086 5_4:-2306397 None:intergenic
TTGAAGAATATTGTAGAGCT+TGG 0.482642 5_4:-2304209 None:intergenic
TTTGGAGGCATTTGGCACCT+AGG 0.482789 5_4:+2309727 Msa0829390:three_prime_UTR
TGTCTTTAATCTTATCAACT+TGG 0.484388 5_4:+2308462 Msa0829390:three_prime_UTR
ATATTCTTGACCAAACACTT+TGG 0.486602 5_4:-2307543 None:intergenic
GTCAGAACTCAAGTTTCTAC+CGG 0.488889 5_4:-2306971 None:intergenic
CCATCCGATACCTTTGATAG+TGG 0.489173 5_4:+2309168 Msa0829390:three_prime_UTR
AAATTGGACCTTCAAGTAGC+TGG 0.490531 5_4:+2307262 Msa0829390:CDS
ACAGCACCGGGACCCAAGCC+TGG 0.492025 5_4:-2307711 None:intergenic
CATCCGATACCTTTGATAGT+GGG 0.494886 5_4:+2309169 Msa0829390:three_prime_UTR
GAATCTGTTGGAAAAGTTGA+AGG 0.495352 5_4:+2309287 Msa0829390:three_prime_UTR
AGAATAATAAAATCTTGCTT+GGG 0.495946 5_4:-2309614 None:intergenic
TACAAGCTTGGCCGCAAGAT+CGG 0.497439 5_4:+2303834 Msa0829390:CDS
TTGTTTAGCCTTCCTTGGCA+AGG 0.498778 5_4:+2305457 Msa0829390:intron
AAATACAGACTATCCAGGCT+TGG 0.499241 5_4:+2307698 Msa0829390:three_prime_UTR
TGCCCATGTCCAGTGTTGGA+AGG 0.501193 5_4:-2307231 None:intergenic
TATTAATATAATTTCTAACC+TGG 0.501843 5_4:-2308188 None:intergenic
CTTGGCCGCAAGATCGGAAG+TGG 0.502438 5_4:+2303840 Msa0829390:CDS
CATGGAGACTGTGACTGTGC+TGG 0.502667 5_4:+2307586 Msa0829390:three_prime_UTR
TGCTTGCTATCGATTTACTT+GGG 0.508590 5_4:+2304383 Msa0829390:CDS
AACTGAAATTACCAATCAAA+GGG 0.509302 5_4:-2309875 None:intergenic
ATGTCAATGAGTGGCAGTAA+TGG 0.510047 5_4:-2305689 None:intergenic
AAATTTAAACCAAGCTGCGT+TGG 0.513552 5_4:-2307859 None:intergenic
GGCCCCACTATCAAAGGTAT+CGG 0.514042 5_4:-2309172 None:intergenic
GGTTTCTTGTCAGGTATTGA+AGG 0.517324 5_4:+2308250 Msa0829390:three_prime_UTR
TTTGGTCAAGAATATTAAAG+TGG 0.520163 5_4:+2307551 Msa0829390:three_prime_UTR
GGGGAAGAGCGAATTAGATC+AGG 0.520235 5_4:+2306904 Msa0829390:CDS
ACACTGTAGAACTACCTGTA+AGG 0.520596 5_4:-2304977 None:intergenic
AACATGGAGCGCATCGTTGG+CGG 0.520716 5_4:+2303807 None:intergenic
AATTGCATAGCTCCTATTTG+AGG 0.521420 5_4:+2307619 Msa0829390:three_prime_UTR
TAATTTGTGATGTCATTCTA+GGG 0.521493 5_4:+2308636 Msa0829390:three_prime_UTR
TAACTGAAATTACCAATCAA+AGG 0.522007 5_4:-2309876 None:intergenic
CCCTTAGACCTTGCCAAGGA+AGG 0.522544 5_4:-2305465 None:intergenic
CTGTTGGAAAAGTTGAAGGT+TGG 0.522624 5_4:+2309291 Msa0829390:three_prime_UTR
ATTCTAAAGGATATTTGCAT+AGG 0.523357 5_4:+2304613 Msa0829390:CDS
CAAAACATGGAGCGCATCGT+TGG 0.523862 5_4:+2303804 None:intergenic
TACATGTTGCTTCTTTCCTG+TGG 0.524197 5_4:+2307646 Msa0829390:three_prime_UTR
AATACAGACTATCCAGGCTT+GGG 0.524729 5_4:+2307699 Msa0829390:three_prime_UTR
TGCATAAGGACGTTAATGTA+AGG 0.524846 5_4:+2310174 Msa0829390:three_prime_UTR
GAACTCAAGTTTCTACCGGC+TGG 0.525103 5_4:-2306967 None:intergenic
TGATAAGTGCCAACGCAGCT+TGG 0.525270 5_4:+2307850 Msa0829390:three_prime_UTR
TCGTCCATATGCAGGGATAT+GGG 0.525906 5_4:-2309244 None:intergenic
CATCAGAAGCAGCAGCGTCA+TGG 0.526408 5_4:-2308851 None:intergenic
AAGATCGGAAGTGGATCCTT+CGG 0.526716 5_4:+2303849 Msa0829390:CDS
ACTTGGTCGGAAGGCCAACC+AGG 0.527701 5_4:+2304665 Msa0829390:CDS
AGGAAAGAAGCAACATGTAA+AGG 0.528947 5_4:-2307642 None:intergenic
TACTTATGGAATTATGCATA+AGG 0.529011 5_4:+2310160 Msa0829390:three_prime_UTR
GCACAATTTGACACTTGCCC+AGG 0.529913 5_4:+2308612 Msa0829390:three_prime_UTR
CCAATGATAGATGCAATAGA+AGG 0.530896 5_4:-2309936 None:intergenic
TGGCACTTATCATATGGCAC+GGG 0.532630 5_4:-2307839 None:intergenic
TCTATCATTGGAGACAAAAG+TGG 0.537358 5_4:+2309948 Msa0829390:three_prime_UTR
ATTAGATCAGGAAATGCTAC+TGG 0.537963 5_4:+2306916 Msa0829390:CDS
GATAACTTCCTCATGGGACT+TGG 0.538752 5_4:+2304648 Msa0829390:CDS
GTTGGCGGCAGCTACAAGCT+TGG 0.539526 5_4:+2303822 Msa0829390:CDS
ATCAGAAGCAGCAGCGTCAT+GGG 0.541989 5_4:-2308850 None:intergenic
AAAAGAAGAACGGAAGAGAG+AGG 0.542418 5_4:-2303894 None:intergenic
AAATAGATGTATTCCTCCAA+TGG 0.543298 5_4:+2310199 Msa0829390:three_prime_UTR
GGCTTGCCCATGTCCAGTGT+TGG 0.544697 5_4:-2307235 None:intergenic
GCTTAAATACTGACCTCGAT+AGG 0.544757 5_4:-2305541 None:intergenic
GGGATTGTGGAACCATCGAT+TGG 0.545147 5_4:-2309224 None:intergenic
TTCTAAAGGATATTTGCATA+GGG 0.547650 5_4:+2304614 Msa0829390:CDS
ATGGATGTTGACAATCATCA+AGG 0.547757 5_4:+2306585 Msa0829390:CDS
GCCTCCTTTGGTAAGTGAAG+TGG 0.549824 5_4:+2310069 Msa0829390:three_prime_UTR
AAAATGGTTTGGCATAGATA+GGG 0.551435 5_4:+2304351 Msa0829390:CDS
TCCACTTCACTTACCAAAGG+AGG 0.551793 5_4:-2310070 None:intergenic
GTTAATGTTAGCTGATCAAA+TGG 0.552458 5_4:+2304462 Msa0829390:CDS
AAGGTTCAGCAGACAAGGCA+AGG 0.552755 5_4:-2307212 None:intergenic
TCTGCTGAACCTTCCAACAC+TGG 0.553667 5_4:+2307222 Msa0829390:CDS
CTGTGACTGTGCTGGAAGGT+TGG 0.556967 5_4:+2307594 Msa0829390:three_prime_UTR
GATGGAAACCACGTATGTGC+AGG 0.558264 5_4:+2309700 Msa0829390:three_prime_UTR
GTATGAAATACAGACTATCC+AGG 0.559225 5_4:+2307693 Msa0829390:three_prime_UTR
ATCTTCATACGATTCAAGCC+TGG 0.559828 5_4:-2307468 None:intergenic
ACATCATCTGTCTTTCATGA+TGG 0.562006 5_4:+2308138 Msa0829390:three_prime_UTR
CTGACATCTATGTACAGCAC+CGG 0.562156 5_4:-2307724 None:intergenic
CCTCATGGGACTTGGTCGGA+AGG 0.562643 5_4:+2304656 Msa0829390:CDS
ATAAGAGATATCTAAACTGA+AGG 0.563886 5_4:+2308068 Msa0829390:three_prime_UTR
GTATTGAAGGCAGTTCTTGG+TGG 0.566137 5_4:+2308263 Msa0829390:three_prime_UTR
CAGACAAGGCAAGGTTTAAG+GGG 0.566654 5_4:-2307203 None:intergenic
TTCTGTACTTCCTTAGAGGA+AGG 0.567077 5_4:+2305323 Msa0829390:CDS
AGCAGAACTTATCAATAGGC+GGG 0.567234 5_4:-2308433 None:intergenic
TACACTGAAGCAGCATAACT+AGG 0.569561 5_4:-2309007 None:intergenic
CACTGTAGAACTACCTGTAA+GGG 0.569854 5_4:-2304976 None:intergenic
AGTCCCATGAGGAAGTTATC+GGG 0.570424 5_4:-2304645 None:intergenic
CGGGATGATTTGGAATCACT+AGG 0.571323 5_4:+2305292 Msa0829390:CDS
TAAACCCGATAACTTCCTCA+TGG 0.571460 5_4:+2304641 Msa0829390:CDS
AGAGACCTATTTGCTCGTGA+AGG 0.573148 5_4:+2305753 Msa0829390:CDS
GTTGGAAGGTTCAGCAGACA+AGG 0.573265 5_4:-2307217 None:intergenic
AGTCTACAACAAATGTGGAA+TGG 0.575004 5_4:-2309642 None:intergenic
TAACCGTCATGCAGTAGCAA+TGG 0.576648 5_4:+2306566 Msa0829390:CDS
GTGGCATTCATAAATTTCAG+TGG 0.578275 5_4:-2308812 None:intergenic
GTATGTGCAGGACTCTTTGG+AGG 0.581460 5_4:+2309712 Msa0829390:three_prime_UTR
AAACCCGATAACTTCCTCAT+GGG 0.582601 5_4:+2304642 Msa0829390:CDS
TAGAAATTATATTAATACAC+AGG 0.582742 5_4:+2308194 Msa0829390:three_prime_UTR
TTTGACGGCGACGATTTCGA+AGG 0.585931 5_4:-2303994 None:intergenic
AAGGCGCGTTCATTTAGTGA+TGG 0.588410 5_4:+2309682 Msa0829390:three_prime_UTR
AAGTGGTGTATTCATGGACA+TGG 0.588755 5_4:+2307568 Msa0829390:three_prime_UTR
TTGGCACTTATCATATGGCA+CGG 0.589263 5_4:-2307840 None:intergenic
AACCTTCCAACACTGGACAT+GGG 0.589719 5_4:+2307229 Msa0829390:CDS
AGGATCCACTTCCGATCTTG+CGG 0.593120 5_4:-2303845 None:intergenic
CCACTATCAAAGGTATCGGA+TGG 0.593522 5_4:-2309168 None:intergenic
CGCATCCCGAAAACGTGGCA+CGG 0.594992 5_4:+2309814 Msa0829390:three_prime_UTR
GTTGTGAATGAAAAGAAGAA+CGG 0.598738 5_4:-2303904 None:intergenic
TTCCAAATGAATGTCAAGCA+TGG 0.599414 5_4:+2307311 Msa0829390:exon
CCTGTAAGGGATGTGGCGAT+TGG 0.601182 5_4:-2304963 None:intergenic
ATACCAACGAAAACAACCCT+AGG 0.601513 5_4:-2309744 None:intergenic
ATGGTTTGGCATAGATAGGG+AGG 0.602024 5_4:+2304354 Msa0829390:CDS
AACAAAGTCTACAACAAATG+TGG 0.602353 5_4:-2309647 None:intergenic
AGCAGGAGCATAAGAAGCAG+AGG 0.604520 5_4:-2307163 None:intergenic
AGAACTACCTGTAAGGGATG+TGG 0.605784 5_4:-2304970 None:intergenic
ATTTCCACTTCACTTACCAA+AGG 0.606675 5_4:-2310073 None:intergenic
TAATAAGACAGTTACCTGGT+TGG 0.606730 5_4:-2304679 None:intergenic
ATCCGATACCTTTGATAGTG+GGG 0.611373 5_4:+2309170 Msa0829390:three_prime_UTR
AATATACTCACAGATAAGGA+AGG 0.613072 5_4:-2306393 None:intergenic
CTTAAGGTTACGAAAAGACA+TGG 0.615653 5_4:+2309506 Msa0829390:three_prime_UTR
AATGACATCACAAATTAACC+TGG 0.616039 5_4:-2308630 None:intergenic
TGGGTATGTTCCTTAGATAG+TGG 0.616372 5_4:-2308831 None:intergenic
CTAGCACAAAACACTGATCA+GGG 0.616979 5_4:-2309530 None:intergenic
ATTAAAACTCATAAATGCAG+AGG 0.617673 5_4:-2309997 None:intergenic
GCATGACGGTTACTTGCACC+AGG 0.618520 5_4:-2306555 None:intergenic
TCCTTCGGTGAAATTTACCT+CGG 0.620087 5_4:+2303864 Msa0829390:CDS
TATGCAGGGATATGGGATTG+TGG 0.620464 5_4:-2309237 None:intergenic
CAAAGAGTCCTGCACATACG+TGG 0.623992 5_4:-2309708 None:intergenic
ATTGTGTTCGTCCATATGCA+GGG 0.624799 5_4:-2309251 None:intergenic
GTTCAGTTCAAATCACCAGC+CGG 0.624880 5_4:+2306952 Msa0829390:CDS
TCATGCATATTCAGGGCATG+GGG 0.625170 5_4:+2306885 Msa0829390:intron
TCAAATATTAATGATAAGTG+GGG 0.625688 5_4:+2309052 Msa0829390:three_prime_UTR
AAGCAGAACTTATCAATAGG+CGG 0.628941 5_4:-2308434 None:intergenic
ACTCATTGACATTTGATCAG+CGG 0.629606 5_4:+2305700 Msa0829390:CDS
ACCGAGGTAAATTTCACCGA+AGG 0.633578 5_4:-2303865 None:intergenic
ACTTCCTCATGGGACTTGGT+CGG 0.634675 5_4:+2304652 Msa0829390:CDS
TGTCTTACATTCTTGTCACG+AGG 0.637274 5_4:-2306997 None:intergenic
GAGACTGTGACTGTGCTGGA+AGG 0.637869 5_4:+2307590 Msa0829390:three_prime_UTR
TGACATCTATGTACAGCACC+GGG 0.638321 5_4:-2307723 None:intergenic
GCATCCACAGTTGCTTTACG+AGG 0.642435 5_4:+2304186 Msa0829390:CDS
ATGACATCACAAATTAACCT+GGG 0.650322 5_4:-2308629 None:intergenic
GCAGCCCTTAGACCTTGCCA+AGG 0.650628 5_4:-2305469 None:intergenic
AAACATGAACAAGTAAAAGG+AGG 0.654815 5_4:-2307988 None:intergenic
ATCATGATATCATGTGAATG+TGG 0.657111 5_4:-2308294 None:intergenic
CTCTACAATATTCTTCAAGG+AGG 0.657190 5_4:+2304214 Msa0829390:CDS
GCTGATCAAATGTCAATGAG+TGG 0.657329 5_4:-2305698 None:intergenic
CATCCATTGCTACTGCATGA+CGG 0.662544 5_4:-2306569 None:intergenic
GGTATCAATATGCGTAGCTG+CGG 0.667764 5_4:-2303973 None:intergenic
GAAGGTATCGACTCCTATCG+AGG 0.668216 5_4:+2305528 Msa0829390:CDS
ATGAGCGCATCCCGAAAACG+TGG 0.671405 5_4:+2309809 Msa0829390:three_prime_UTR
ACGAGAACAATATCAATGAG+TGG 0.673719 5_4:+2310110 Msa0829390:three_prime_UTR
ATATGAATGTCAGTCCGACA+AGG 0.674012 5_4:+2309446 Msa0829390:three_prime_UTR
GATATGTGAAGCTGCACACG+TGG 0.676707 5_4:+2307504 Msa0829390:three_prime_UTR
GGGAGAACAAAAGCTTAACA+GGG 0.678093 5_4:+2305133 Msa0829390:intron
TTCTGGATGAGAATACGCCA+AGG 0.680513 5_4:+2308892 Msa0829390:three_prime_UTR
TTGGCCTCGTAAAGCAACTG+TGG 0.692532 5_4:-2304190 None:intergenic
GGCACTTATCATATGGCACG+GGG 0.701972 5_4:-2307838 None:intergenic
AAGAGAGAGGATAGTCACCG+AGG 0.719149 5_4:-2303881 None:intergenic
CCTTCCGACCAAGTCCCATG+AGG 0.721487 5_4:-2304656 None:intergenic
CTGTACATAGATGTCAGATG+TGG 0.722642 5_4:+2307730 Msa0829390:three_prime_UTR
GGTGTCAAAACATTGAGTTG+AGG 0.744691 5_4:-2309976 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATAATATTAAAAGTAAAAT+TGG - chr5_4:2304073-2304092 None:intergenic 10.0%
!! ATAAAAGAATGAAACAAAAA+TGG - chr5_4:2305003-2305022 None:intergenic 15.0%
!!! TGCCAAATTTTTAATTATAT+GGG + chr5_4:2306014-2306033 Msa0829390:intron 15.0%
!! TACCCATATAATTAAAAATT+TGG - chr5_4:2306019-2306038 None:intergenic 15.0%
!!! TTTAGTAATTATTCTCTTTT+TGG + chr5_4:2307115-2307134 Msa0829390:intron 15.0%
!! AAATACAAAAAAATAAGGAT+AGG - chr5_4:2307432-2307451 None:intergenic 15.0%
!! CTACAAAATACAAAAAAATA+AGG - chr5_4:2307437-2307456 None:intergenic 15.0%
!!! TTTATAGTTTTTTTTTTGAG+AGG + chr5_4:2307919-2307938 Msa0829390:three_prime_UTR 15.0%
!! TATTAATATAATTTCTAACC+TGG - chr5_4:2308191-2308210 None:intergenic 15.0%
!! TAGAAATTATATTAATACAC+AGG + chr5_4:2308194-2308213 Msa0829390:three_prime_UTR 15.0%
!!! GAGTTTTAATTAATAGAAAT+AGG + chr5_4:2310010-2310029 Msa0829390:three_prime_UTR 15.0%
!!! TTCTATCATAAACCATATTT+TGG + chr5_4:2304857-2304876 Msa0829390:intron 20.0%
!!! AGGTTTACATAATTGATTTT+GGG + chr5_4:2304912-2304931 Msa0829390:intron 20.0%
!!! AGTTATTTTACTTTATTCAG+GGG - chr5_4:2305596-2305615 None:intergenic 20.0%
!!! CAGTTATTTTACTTTATTCA+GGG - chr5_4:2305597-2305616 None:intergenic 20.0%
!!! CTGCCAAATTTTTAATTATA+TGG + chr5_4:2306013-2306032 Msa0829390:intron 20.0%
!!! GGTATAAAATGTTTTGATTT+TGG + chr5_4:2306035-2306054 Msa0829390:intron 20.0%
!!! TTTAAGGAATAGTATTTTAG+AGG + chr5_4:2306084-2306103 Msa0829390:intron 20.0%
!!! AATTATTTTAAACACATGCA+TGG + chr5_4:2306227-2306246 Msa0829390:intron 20.0%
!!! AATTTGATTTCGTTTTTGAT+TGG + chr5_4:2306328-2306347 Msa0829390:CDS 20.0%
!! TTTAATATTATCAGAAGCAA+GGG - chr5_4:2306513-2306532 None:intergenic 20.0%
!!! TTTTAATATTATCAGAAGCA+AGG - chr5_4:2306514-2306533 None:intergenic 20.0%
!!! TTAGTGCTGTTTATTTTTTT+AGG + chr5_4:2307345-2307364 Msa0829390:intron 20.0%
!!! TTTTTTCTTGTTATTTTACC+AGG + chr5_4:2308170-2308189 Msa0829390:three_prime_UTR 20.0%
!!! ACTAACTTGTAAAACAAATT+TGG + chr5_4:2308740-2308759 Msa0829390:intron 20.0%
!! TACCAATATTAATATTTCCT+TGG - chr5_4:2308912-2308931 None:intergenic 20.0%
!! CTCAAATATTAATGATAAGT+GGG + chr5_4:2309051-2309070 Msa0829390:three_prime_UTR 20.0%
!! TCAAATATTAATGATAAGTG+GGG + chr5_4:2309052-2309071 Msa0829390:three_prime_UTR 20.0%
!!! TTTTACAAATTTTCCAGATA+GGG - chr5_4:2309125-2309144 None:intergenic 20.0%
!!! ATTTTACAAATTTTCCAGAT+AGG - chr5_4:2309126-2309145 None:intergenic 20.0%
!!! AAAATGTGAATTCAATGTTT+TGG - chr5_4:2309196-2309215 None:intergenic 20.0%
!! AGAATAATAAAATCTTGCTT+GGG - chr5_4:2309617-2309636 None:intergenic 20.0%
!! CTTTGTTAAATAAACTGATA+AGG + chr5_4:2309663-2309682 Msa0829390:three_prime_UTR 20.0%
! TTACATTGCTAATTCATTAC+AGG + chr5_4:2304147-2304166 Msa0829390:intron 25.0%
!!! GTTGTTTTTGTATTGTTCTA+AGG + chr5_4:2304263-2304282 Msa0829390:intron 25.0%
!!! GAAGATCTTTTTGTTTATTG+TGG + chr5_4:2304415-2304434 Msa0829390:CDS 25.0%
!!! ATCTTTTTGTTTATTGTGGA+AGG + chr5_4:2304419-2304438 Msa0829390:CDS 25.0%
! ATTGAATATGTGCATTCTAA+AGG + chr5_4:2304600-2304619 Msa0829390:CDS 25.0%
!! ATTCTAAAGGATATTTGCAT+AGG + chr5_4:2304613-2304632 Msa0829390:CDS 25.0%
!! TTCTAAAGGATATTTGCATA+GGG + chr5_4:2304614-2304633 Msa0829390:CDS 25.0%
!!! CTACTTGTTGCTATTTATTA+TGG + chr5_4:2304734-2304753 Msa0829390:intron 25.0%
! TTATGAATTGGACCAAAATA+TGG - chr5_4:2304872-2304891 None:intergenic 25.0%
!!! CAGGTTTACATAATTGATTT+TGG + chr5_4:2304911-2304930 Msa0829390:intron 25.0%
! TTTGTTAGTCACAAAAACTA+AGG - chr5_4:2305102-2305121 None:intergenic 25.0%
! ACTAACAAATATATCCTACA+GGG + chr5_4:2305113-2305132 Msa0829390:intron 25.0%
! AAACATTTATTCAAGCTGAA+AGG - chr5_4:2305228-2305247 None:intergenic 25.0%
!!! TTTTTTTAGAGCAAAGTAGA+CGG + chr5_4:2305272-2305291 Msa0829390:intron 25.0%
! TGAAAAAATATGTCAGAAGA+AGG + chr5_4:2305510-2305529 Msa0829390:CDS 25.0%
!!! TTATTTTACTTTATTCAGGG+GGG - chr5_4:2305594-2305613 None:intergenic 25.0%
!!! GTTATTTTACTTTATTCAGG+GGG - chr5_4:2305595-2305614 None:intergenic 25.0%
!!! CCAGTTATTTTACTTTATTC+AGG - chr5_4:2305598-2305617 None:intergenic 25.0%
! CCTGAATAAAGTAAAATAAC+TGG + chr5_4:2305595-2305614 Msa0829390:intron 25.0%
!!! TTTTTTTTTCCCTTTCCAAA+AGG + chr5_4:2305626-2305645 Msa0829390:intron 25.0%
! ATACATAAAGGAAAAACAGA+GGG - chr5_4:2306297-2306316 None:intergenic 25.0%
!! TGATTGCTGATACTTTAAAA+TGG - chr5_4:2306355-2306374 None:intergenic 25.0%
! ATCAAATATACTCACAGATA+AGG - chr5_4:2306400-2306419 None:intergenic 25.0%
!!! TTCCTTGTCATTTATTTTGT+GGG + chr5_4:2306450-2306469 Msa0829390:intron 25.0%
!! AAGATTTTCATGCATATTCA+GGG + chr5_4:2306878-2306897 Msa0829390:intron 25.0%
!!! TTCTCTTTTTGGTAGATTTT+TGG + chr5_4:2307126-2307145 Msa0829390:intron 25.0%
!!! ATTTTTTTAGGAAAAACGTG+TGG + chr5_4:2307357-2307376 Msa0829390:intron 25.0%
!! TTTGTAGTATTTCTATTTCC+AGG + chr5_4:2307450-2307469 Msa0829390:intron 25.0%
! TTTGGTCAAGAATATTAAAG+TGG + chr5_4:2307551-2307570 Msa0829390:three_prime_UTR 25.0%
! ATATTAAAGTGGTGTATTCA+TGG + chr5_4:2307562-2307581 Msa0829390:three_prime_UTR 25.0%
! TAATCATCAAGTAACATAAC+AGG - chr5_4:2307814-2307833 None:intergenic 25.0%
! ATAAGAGATATCTAAACTGA+AGG + chr5_4:2308068-2308087 Msa0829390:three_prime_UTR 25.0%
!! TAATACACAGGCAAATATTT+TGG + chr5_4:2308206-2308225 Msa0829390:three_prime_UTR 25.0%
!! TATCATGATTGCCTTTTATT+TGG + chr5_4:2308308-2308327 Msa0829390:three_prime_UTR 25.0%
!!! ATCATGATTGCCTTTTATTT+GGG + chr5_4:2308309-2308328 Msa0829390:three_prime_UTR 25.0%
!! TCATTTAGAAGACATCATTT+TGG + chr5_4:2308368-2308387 Msa0829390:three_prime_UTR 25.0%
! TGTCTTTAATCTTATCAACT+TGG + chr5_4:2308462-2308481 Msa0829390:three_prime_UTR 25.0%
!!! TTCAACTATAATTTTGATGC+TGG + chr5_4:2308496-2308515 Msa0829390:three_prime_UTR 25.0%
!!! TTAATTTGTGATGTCATTCT+AGG + chr5_4:2308635-2308654 Msa0829390:three_prime_UTR 25.0%
!! TAATTTGTGATGTCATTCTA+GGG + chr5_4:2308636-2308655 Msa0829390:three_prime_UTR 25.0%
! TTCATAAATTTCAGTGGAAA+AGG - chr5_4:2308809-2308828 None:intergenic 25.0%
! TTGAGTTAATATGACTTCAA+TGG + chr5_4:2308943-2308962 Msa0829390:three_prime_UTR 25.0%
!!! AAGTAGTCATTGATTTCAAT+TGG + chr5_4:2308974-2308993 Msa0829390:three_prime_UTR 25.0%
! GCTCAAATATTAATGATAAG+TGG + chr5_4:2309050-2309069 Msa0829390:three_prime_UTR 25.0%
!!! ATGACTTGATTTGTTTTTAC+TGG + chr5_4:2309076-2309095 Msa0829390:three_prime_UTR 25.0%
!! TTTACAAATTTTCCAGATAG+GGG - chr5_4:2309124-2309143 None:intergenic 25.0%
!! AAATTCTTTGTGCTGATATA+AGG + chr5_4:2309142-2309161 Msa0829390:three_prime_UTR 25.0%
!! TTTTATCAATTTCCAATCGA+TGG + chr5_4:2309212-2309231 Msa0829390:three_prime_UTR 25.0%
! AACCTTAAGGATTTGAATAA+TGG - chr5_4:2309495-2309514 None:intergenic 25.0%
! GAGAATAATAAAATCTTGCT+TGG - chr5_4:2309618-2309637 None:intergenic 25.0%
! CTTGATTTAGCATTATTCTT+TGG - chr5_4:2309775-2309794 None:intergenic 25.0%
! AACTGAAATTACCAATCAAA+GGG - chr5_4:2309878-2309897 None:intergenic 25.0%
! TAACTGAAATTACCAATCAA+AGG - chr5_4:2309879-2309898 None:intergenic 25.0%
! ATTAAAACTCATAAATGCAG+AGG - chr5_4:2310000-2310019 None:intergenic 25.0%
! TACTTATGGAATTATGCATA+AGG + chr5_4:2310160-2310179 Msa0829390:three_prime_UTR 25.0%
GTTGTGAATGAAAAGAAGAA+CGG - chr5_4:2303907-2303926 None:intergenic 30.0%
CAAATTAGAGAGTGAGTATT+AGG - chr5_4:2304044-2304063 None:intergenic 30.0%
!! AATGTAACGTTAAGTTTTGG+TGG - chr5_4:2304134-2304153 None:intergenic 30.0%
! AGCAATGTAACGTTAAGTTT+TGG - chr5_4:2304137-2304156 None:intergenic 30.0%
TTGAAGAATATTGTAGAGCT+TGG - chr5_4:2304212-2304231 None:intergenic 30.0%
AAGCTCTACAATATTCTTCA+AGG + chr5_4:2304211-2304230 Msa0829390:CDS 30.0%
!!! GTTTTTGTATTGTTCTAAGG+AGG + chr5_4:2304266-2304285 Msa0829390:intron 30.0%
! TAAAATGGTTTGGCATAGAT+AGG + chr5_4:2304350-2304369 Msa0829390:CDS 30.0%
! AAAATGGTTTGGCATAGATA+GGG + chr5_4:2304351-2304370 Msa0829390:CDS 30.0%
ACAAAAAGATCTTCAAGACT+AGG - chr5_4:2304409-2304428 None:intergenic 30.0%
GTTAATGTTAGCTGATCAAA+TGG + chr5_4:2304462-2304481 Msa0829390:CDS 30.0%
TGGTTTATGATAGAACTGTA+TGG - chr5_4:2304852-2304871 None:intergenic 30.0%
CAGCACATAGATTTATGAAT+TGG - chr5_4:2304884-2304903 None:intergenic 30.0%
GACTAACAAATATATCCTAC+AGG + chr5_4:2305112-2305131 Msa0829390:intron 30.0%
!!! TTTTTTAGAGCAAAGTAGAC+GGG + chr5_4:2305273-2305292 Msa0829390:intron 30.0%
ATTATTGTCTTGAGAAACAG+CGG - chr5_4:2305398-2305417 None:intergenic 30.0%
!! TATTTTTGTTTAGCCTTCCT+TGG + chr5_4:2305452-2305471 Msa0829390:intron 30.0%
GCAAAAGCAATCAAATGATA+TGG - chr5_4:2305821-2305840 None:intergenic 30.0%
!! TTGCTTTTGCAATTGTTTCT+TGG + chr5_4:2305831-2305850 Msa0829390:intron 30.0%
!! TGCTTTTGCAATTGTTTCTT+GGG + chr5_4:2305832-2305851 Msa0829390:intron 30.0%
CCTTAAATTTAGCCAATCAT+AGG - chr5_4:2306071-2306090 None:intergenic 30.0%
! CCTATGATTGGCTAAATTTA+AGG + chr5_4:2306068-2306087 Msa0829390:intron 30.0%
TATCCTTCTTGATTTCAAAG+AGG + chr5_4:2306117-2306136 Msa0829390:intron 30.0%
CATACATAAAGGAAAAACAG+AGG - chr5_4:2306298-2306317 None:intergenic 30.0%
! GTTTTTCCTTTATGTATGTC+AGG + chr5_4:2306300-2306319 Msa0829390:intron 30.0%
AATATACTCACAGATAAGGA+AGG - chr5_4:2306396-2306415 None:intergenic 30.0%
CACAAAATAAATGACAAGGA+AGG - chr5_4:2306451-2306470 None:intergenic 30.0%
!!! CTTCCTTGTCATTTATTTTG+TGG + chr5_4:2306449-2306468 Msa0829390:intron 30.0%
CAAGAAGTAATAATGTCTGT+TGG + chr5_4:2306666-2306685 Msa0829390:intron 30.0%
GCTAGAAAAAGTCATTGTAA+AGG + chr5_4:2306691-2306710 Msa0829390:intron 30.0%
!! CTTGTTTGTTATGACCTAAT+TGG + chr5_4:2306855-2306874 Msa0829390:intron 30.0%
TGCATGAAAATCTTCCAATT+AGG - chr5_4:2306872-2306891 None:intergenic 30.0%
! GAAGATTTTCATGCATATTC+AGG + chr5_4:2306877-2306896 Msa0829390:intron 30.0%
TAAATTCAATGTTGCATCAC+AGG - chr5_4:2307047-2307066 None:intergenic 30.0%
! ATGTCTAAAACTGAGTAGAT+CGG + chr5_4:2307090-2307109 Msa0829390:intron 30.0%
!! GATTTTTGGAGAAGCAAATA+TGG + chr5_4:2307140-2307159 Msa0829390:intron 30.0%
CTTCACATATCTATTCTTCT+GGG - chr5_4:2307495-2307514 None:intergenic 30.0%
TATTCTTGACCAAACACTTT+GGG - chr5_4:2307545-2307564 None:intergenic 30.0%
ATATTCTTGACCAAACACTT+TGG - chr5_4:2307546-2307565 None:intergenic 30.0%
GGAACAAAGACTATCAAAAA+CGG - chr5_4:2307970-2307989 None:intergenic 30.0%
AAACATGAACAAGTAAAAGG+AGG - chr5_4:2307991-2308010 None:intergenic 30.0%
AGCAAACATGAACAAGTAAA+AGG - chr5_4:2307994-2308013 None:intergenic 30.0%
CTGAAAGGTTACTGAAATAA+TGG + chr5_4:2308229-2308248 Msa0829390:three_prime_UTR 30.0%
TGAAATAATGGTTTCTTGTC+AGG + chr5_4:2308241-2308260 Msa0829390:three_prime_UTR 30.0%
ATCATGATATCATGTGAATG+TGG - chr5_4:2308297-2308316 None:intergenic 30.0%
ATGACATCACAAATTAACCT+GGG - chr5_4:2308632-2308651 None:intergenic 30.0%
AATGACATCACAAATTAACC+TGG - chr5_4:2308633-2308652 None:intergenic 30.0%
TTTGTTTCATGTGTGATTCA+AGG + chr5_4:2308679-2308698 Msa0829390:three_prime_UTR 30.0%
!! TCCATACTTTTACTTTTGCA+GGG + chr5_4:2308780-2308799 Msa0829390:intron 30.0%
TTTATGAATGCCACTATCTA+AGG + chr5_4:2308821-2308840 Msa0829390:three_prime_UTR 30.0%
CGCCAAGGAAATATTAATAT+TGG + chr5_4:2308907-2308926 Msa0829390:three_prime_UTR 30.0%
TTGATTTCAATTGGAGAGAA+AGG + chr5_4:2308983-2309002 Msa0829390:three_prime_UTR 30.0%
TAAGAATCTTGGATTCTTTC+TGG + chr5_4:2309028-2309047 Msa0829390:three_prime_UTR 30.0%
! TTACAAATTTTCCAGATAGG+GGG - chr5_4:2309123-2309142 None:intergenic 30.0%
!! TCGAAGTATTTTGAATCTGT+TGG + chr5_4:2309275-2309294 Msa0829390:three_prime_UTR 30.0%
TCTTCAGAACTATTTGTACT+TGG + chr5_4:2309392-2309411 Msa0829390:three_prime_UTR 30.0%
TGCCATTATTCAAATCCTTA+AGG + chr5_4:2309490-2309509 Msa0829390:three_prime_UTR 30.0%
! TTAAAGAGCAGACATTTTTC+TGG + chr5_4:2309573-2309592 Msa0829390:three_prime_UTR 30.0%
AACAAAGTCTACAACAAATG+TGG - chr5_4:2309650-2309669 None:intergenic 30.0%
AAATAGATGTATTCCTCCAA+TGG + chr5_4:2310199-2310218 Msa0829390:three_prime_UTR 30.0%
! GCAGAAACTTACGATTTTGA+CGG - chr5_4:2304012-2304031 None:intergenic 35.0%
CTCTACAATATTCTTCAAGG+AGG + chr5_4:2304214-2304233 Msa0829390:CDS 35.0%
! GTTTGAGATTTCGTGTTTCT+TGG + chr5_4:2304307-2304326 Msa0829390:intron 35.0%
ATTCCAGGCTTAAAATGGTT+TGG + chr5_4:2304340-2304359 Msa0829390:CDS 35.0%
!! TGCTTGCTATCGATTTACTT+GGG + chr5_4:2304383-2304402 Msa0829390:CDS 35.0%
TAATAAGACAGTTACCTGGT+TGG - chr5_4:2304682-2304701 None:intergenic 35.0%
GCAATAATAAGACAGTTACC+TGG - chr5_4:2304686-2304705 None:intergenic 35.0%
!!! ATCTATGTGCTGTTTTTGTC+AGG + chr5_4:2304892-2304911 Msa0829390:intron 35.0%
!!! TTGATTTTGGGCTAGCAAAA+CGG + chr5_4:2304924-2304943 Msa0829390:CDS 35.0%
GTTAGTCACAAAAACTAAGG+AGG - chr5_4:2305099-2305118 None:intergenic 35.0%
CAAGTTGCAATACTCATCTT+GGG + chr5_4:2305169-2305188 Msa0829390:CDS 35.0%
ATACTTCAGGAAAGATCATG+TGG - chr5_4:2305363-2305382 None:intergenic 35.0%
!! GGTTCTGGAAAAAATACTTC+AGG - chr5_4:2305376-2305395 None:intergenic 35.0%
TTATTGTCTTGAGAAACAGC+GGG - chr5_4:2305397-2305416 None:intergenic 35.0%
!! TGCATAGTACCTTTTGGAAA+GGG - chr5_4:2305638-2305657 None:intergenic 35.0%
!! TTGCATAGTACCTTTTGGAA+AGG - chr5_4:2305639-2305658 None:intergenic 35.0%
! GAGATTTGCATAGTACCTTT+TGG - chr5_4:2305644-2305663 None:intergenic 35.0%
AAGTATGAAGCAAACTCTAC+TGG - chr5_4:2305669-2305688 None:intergenic 35.0%
ACTCATTGACATTTGATCAG+CGG + chr5_4:2305700-2305719 Msa0829390:CDS 35.0%
!! GCTTTTGCAATTGTTTCTTG+GGG + chr5_4:2305833-2305852 Msa0829390:intron 35.0%
!! CTTTTGCAATTGTTTCTTGG+GGG + chr5_4:2305834-2305853 Msa0829390:intron 35.0%
AAGTTAGCAAGGTATACCTT+CGG - chr5_4:2305908-2305927 None:intergenic 35.0%
ACATCTGCGAAATAATGAGT+AGG + chr5_4:2305928-2305947 Msa0829390:intron 35.0%
GGTAACTGAAAACCTATGAT+TGG + chr5_4:2306056-2306075 Msa0829390:intron 35.0%
!! TGACCTCTTTGAAATCAAGA+AGG - chr5_4:2306123-2306142 None:intergenic 35.0%
TTGATTTCAAAGAGGTCATG+TGG + chr5_4:2306125-2306144 Msa0829390:intron 35.0%
! AGTCCTCATTTTCTCAAGAA+TGG + chr5_4:2306178-2306197 Msa0829390:intron 35.0%
! GTCCTCATTTTCTCAAGAAT+GGG + chr5_4:2306179-2306198 Msa0829390:intron 35.0%
! TCCTCATTTTCTCAAGAATG+GGG + chr5_4:2306180-2306199 Msa0829390:intron 35.0%
GGGAGAGGAAAAGTTATATT+TGG - chr5_4:2306277-2306296 None:intergenic 35.0%
TCATAGCCTGACATACATAA+AGG - chr5_4:2306309-2306328 None:intergenic 35.0%
GTCCCACAAAATAAATGACA+AGG - chr5_4:2306455-2306474 None:intergenic 35.0%
!!! TCATTTATTTTGTGGGACTG+AGG + chr5_4:2306457-2306476 Msa0829390:intron 35.0%
!!! CATTTATTTTGTGGGACTGA+GGG + chr5_4:2306458-2306477 Msa0829390:intron 35.0%
!!! ATTTATTTTGTGGGACTGAG+GGG + chr5_4:2306459-2306478 Msa0829390:intron 35.0%
ATGGATGTTGACAATCATCA+AGG + chr5_4:2306585-2306604 Msa0829390:CDS 35.0%
TTGTGTGCAGTGTCTTAAAT+AGG + chr5_4:2306609-2306628 Msa0829390:intron 35.0%
ATTAGATCAGGAAATGCTAC+TGG + chr5_4:2306916-2306935 Msa0829390:CDS 35.0%
CAGGAAGAGTGAGTTTATTA+AGG - chr5_4:2307028-2307047 None:intergenic 35.0%
! ACTTGAAGGTCCAATTTTAC+TGG - chr5_4:2307259-2307278 None:intergenic 35.0%
TTCCAAATGAATGTCAAGCA+TGG + chr5_4:2307311-2307330 Msa0829390:exon 35.0%
TACCATGCTTGACATTCATT+TGG - chr5_4:2307316-2307335 None:intergenic 35.0%
! TGTCAAGCATGGTAATTTTC+TGG + chr5_4:2307322-2307341 Msa0829390:intron 35.0%
GCTTCACATATCTATTCTTC+TGG - chr5_4:2307496-2307515 None:intergenic 35.0%
AATTGCATAGCTCCTATTTG+AGG + chr5_4:2307619-2307638 Msa0829390:three_prime_UTR 35.0%
AACATGTAAAGGCCTCAAAT+AGG - chr5_4:2307634-2307653 None:intergenic 35.0%
AGGAAAGAAGCAACATGTAA+AGG - chr5_4:2307645-2307664 None:intergenic 35.0%
GTATGAAATACAGACTATCC+AGG + chr5_4:2307693-2307712 Msa0829390:three_prime_UTR 35.0%
AAATTTAAACCAAGCTGCGT+TGG - chr5_4:2307862-2307881 None:intergenic 35.0%
! TACACTTGCATTTTTACAGC+TGG + chr5_4:2308031-2308050 Msa0829390:three_prime_UTR 35.0%
ACATCATCTGTCTTTCATGA+TGG + chr5_4:2308138-2308157 Msa0829390:three_prime_UTR 35.0%
!!! AGGCAAATATTTTGGCTGAA+AGG + chr5_4:2308214-2308233 Msa0829390:three_prime_UTR 35.0%
!! TTGCCTTTTATTTGGGTGAT+CGG + chr5_4:2308316-2308335 Msa0829390:three_prime_UTR 35.0%
AAGCAGAACTTATCAATAGG+CGG - chr5_4:2308437-2308456 None:intergenic 35.0%
CTGAAGCAGAACTTATCAAT+AGG - chr5_4:2308440-2308459 None:intergenic 35.0%
ACAAGCACTTCTTTACTTGT+AGG + chr5_4:2308587-2308606 Msa0829390:three_prime_UTR 35.0%
TTCATGTGTGATTCAAGGTT+TGG + chr5_4:2308684-2308703 Msa0829390:intron 35.0%
!! GTCCATACTTTTACTTTTGC+AGG + chr5_4:2308779-2308798 Msa0829390:intron 35.0%
GTGGCATTCATAAATTTCAG+TGG - chr5_4:2308815-2308834 None:intergenic 35.0%
ATAAGTCAGCATAAGCATTC+TGG + chr5_4:2308875-2308894 Msa0829390:three_prime_UTR 35.0%
GAATCTGTTGGAAAAGTTGA+AGG + chr5_4:2309287-2309306 Msa0829390:three_prime_UTR 35.0%
TCCTGAAGTATAATGAGCTT+TGG + chr5_4:2309316-2309335 Msa0829390:three_prime_UTR 35.0%
TCCAAAGCTCATTATACTTC+AGG - chr5_4:2309320-2309339 None:intergenic 35.0%
! CATGTCTTTTCGTAACCTTA+AGG - chr5_4:2309508-2309527 None:intergenic 35.0%
CTTAAGGTTACGAAAAGACA+TGG + chr5_4:2309506-2309525 Msa0829390:three_prime_UTR 35.0%
AGTCTACAACAAATGTGGAA+TGG - chr5_4:2309645-2309664 None:intergenic 35.0%
CCAATGATAGATGCAATAGA+AGG - chr5_4:2309939-2309958 None:intergenic 35.0%
CCTTCTATTGCATCTATCAT+TGG + chr5_4:2309936-2309955 Msa0829390:three_prime_UTR 35.0%
TCTATCATTGGAGACAAAAG+TGG + chr5_4:2309948-2309967 Msa0829390:three_prime_UTR 35.0%
ATTTCCACTTCACTTACCAA+AGG - chr5_4:2310076-2310095 None:intergenic 35.0%
ACGAGAACAATATCAATGAG+TGG + chr5_4:2310110-2310129 Msa0829390:three_prime_UTR 35.0%
CACTACAACTGTGATACTTA+TGG + chr5_4:2310146-2310165 Msa0829390:three_prime_UTR 35.0%
TGCATAAGGACGTTAATGTA+AGG + chr5_4:2310174-2310193 Msa0829390:three_prime_UTR 35.0%
TCCTTCGGTGAAATTTACCT+CGG + chr5_4:2303864-2303883 Msa0829390:CDS 40.0%
AAAAGAAGAACGGAAGAGAG+AGG - chr5_4:2303897-2303916 None:intergenic 40.0%
!! GTATTGTTCTAAGGAGGTAG+TGG + chr5_4:2304272-2304291 Msa0829390:intron 40.0%
! ATGCCAAACCATTTTAAGCC+TGG - chr5_4:2304346-2304365 None:intergenic 40.0%
!! GTGCTTGCTATCGATTTACT+TGG + chr5_4:2304382-2304401 Msa0829390:CDS 40.0%
TAAACCCGATAACTTCCTCA+TGG + chr5_4:2304641-2304660 Msa0829390:CDS 40.0%
AAACCCGATAACTTCCTCAT+GGG + chr5_4:2304642-2304661 Msa0829390:CDS 40.0%
AAGTCCCATGAGGAAGTTAT+CGG - chr5_4:2304649-2304668 None:intergenic 40.0%
AGCAACAAGTAGTTGACTGA+CGG - chr5_4:2304726-2304745 None:intergenic 40.0%
!! CAAGCCTTATTCCACTAAGT+GGG + chr5_4:2304802-2304821 Msa0829390:intron 40.0%
!! AAGCCTTATTCCACTAAGTG+GGG + chr5_4:2304803-2304822 Msa0829390:intron 40.0%
CACTGTAGAACTACCTGTAA+GGG - chr5_4:2304979-2304998 None:intergenic 40.0%
ACACTGTAGAACTACCTGTA+AGG - chr5_4:2304980-2304999 None:intergenic 40.0%
TCACAAAAACTAAGGAGGTG+GGG - chr5_4:2305094-2305113 None:intergenic 40.0%
GTCACAAAAACTAAGGAGGT+GGG - chr5_4:2305095-2305114 None:intergenic 40.0%
AGTCACAAAAACTAAGGAGG+TGG - chr5_4:2305096-2305115 None:intergenic 40.0%
! TAAGCTTTTGTTCTCCCTGT+AGG - chr5_4:2305130-2305149 None:intergenic 40.0%
AGGGAGAACAAAAGCTTAAC+AGG + chr5_4:2305132-2305151 Msa0829390:intron 40.0%
GGGAGAACAAAAGCTTAACA+GGG + chr5_4:2305133-2305152 Msa0829390:intron 40.0%
GCAAGTTGCAATACTCATCT+TGG + chr5_4:2305168-2305187 Msa0829390:CDS 40.0%
TGCAATACTCATCTTGGGAT+TGG + chr5_4:2305174-2305193 Msa0829390:CDS 40.0%
GTACTTCTGTACTTCCTTAG+AGG + chr5_4:2305319-2305338 Msa0829390:CDS 40.0%
TTCTGTACTTCCTTAGAGGA+AGG + chr5_4:2305323-2305342 Msa0829390:CDS 40.0%
TACTTCCTTAGAGGAAGGTA+TGG + chr5_4:2305328-2305347 Msa0829390:intron 40.0%
GCTTAAATACTGACCTCGAT+AGG - chr5_4:2305544-2305563 None:intergenic 40.0%
TTTACTTTATTCAGGGGGGA+GGG - chr5_4:2305590-2305609 None:intergenic 40.0%
! TTTTACTTTATTCAGGGGGG+AGG - chr5_4:2305591-2305610 None:intergenic 40.0%
ATGTCAATGAGTGGCAGTAA+TGG - chr5_4:2305692-2305711 None:intergenic 40.0%
GCTGATCAAATGTCAATGAG+TGG - chr5_4:2305701-2305720 None:intergenic 40.0%
CGCTTCAAGAATCCATAATC+AGG - chr5_4:2305726-2305745 None:intergenic 40.0%
AATCACCTTCACGAGCAAAT+AGG - chr5_4:2305761-2305780 None:intergenic 40.0%
AATTTGTCGAATACACCCGA+AGG + chr5_4:2305889-2305908 Msa0829390:intron 40.0%
AGTTAGCAAGGTATACCTTC+GGG - chr5_4:2305907-2305926 None:intergenic 40.0%
TTCGCAGATGTAAGTTAGCA+AGG - chr5_4:2305919-2305938 None:intergenic 40.0%
AGTAAGCAAGTTACGTCTTC+AGG - chr5_4:2305990-2306009 None:intergenic 40.0%
GACATTGAGGAGGTTAGATT+AGG + chr5_4:2306152-2306171 Msa0829390:intron 40.0%
TCCCCATTCTTGAGAAAATG+AGG - chr5_4:2306184-2306203 None:intergenic 40.0%
! GTTTTTCTCCCTCTGATCTT+CGG + chr5_4:2306249-2306268 Msa0829390:intron 40.0%
! ATTTGGTACCGAAGATCAGA+GGG - chr5_4:2306260-2306279 None:intergenic 40.0%
! TATTTGGTACCGAAGATCAG+AGG - chr5_4:2306261-2306280 None:intergenic 40.0%
TAAAGGAAAAACAGAGGGAG+AGG - chr5_4:2306292-2306311 None:intergenic 40.0%
!!! AGTTTTGTTGACAACCTGCA+AGG + chr5_4:2306725-2306744 Msa0829390:intron 40.0%
AGACAGGACTAAGACACAAA+AGG - chr5_4:2306766-2306785 None:intergenic 40.0%
CTTAGTCCTGTCTTAGAAGA+TGG + chr5_4:2306773-2306792 Msa0829390:intron 40.0%
!! TTCCATCCATCTTCTAAGAC+AGG - chr5_4:2306782-2306801 None:intergenic 40.0%
TTTCATGCATATTCAGGGCA+TGG + chr5_4:2306883-2306902 Msa0829390:intron 40.0%
TTCATGCATATTCAGGGCAT+GGG + chr5_4:2306884-2306903 Msa0829390:intron 40.0%
GTCAGAACTCAAGTTTCTAC+CGG - chr5_4:2306974-2306993 None:intergenic 40.0%
TGTCTTACATTCTTGTCACG+AGG - chr5_4:2307000-2307019 None:intergenic 40.0%
!!! TTCCTTTTTGAAGTACCAGC+AGG - chr5_4:2307183-2307202 None:intergenic 40.0%
AAATTGGACCTTCAAGTAGC+TGG + chr5_4:2307262-2307281 Msa0829390:CDS 40.0%
CAGCAAAAGGGACAAAACAA+CGG - chr5_4:2307389-2307408 None:intergenic 40.0%
CAAAACTCACAGCAGCAAAA+GGG - chr5_4:2307401-2307420 None:intergenic 40.0%
ACAAAACTCACAGCAGCAAA+AGG - chr5_4:2307402-2307421 None:intergenic 40.0%
ATCTTCATACGATTCAAGCC+TGG - chr5_4:2307471-2307490 None:intergenic 40.0%
AAGTGGTGTATTCATGGACA+TGG + chr5_4:2307568-2307587 Msa0829390:three_prime_UTR 40.0%
! TACATGTTGCTTCTTTCCTG+TGG + chr5_4:2307646-2307665 Msa0829390:three_prime_UTR 40.0%
! TTTTTGTAGTCAGTCACCAC+AGG - chr5_4:2307665-2307684 None:intergenic 40.0%
AAATACAGACTATCCAGGCT+TGG + chr5_4:2307698-2307717 Msa0829390:three_prime_UTR 40.0%
AATACAGACTATCCAGGCTT+GGG + chr5_4:2307699-2307718 Msa0829390:three_prime_UTR 40.0%
CTGTACATAGATGTCAGATG+TGG + chr5_4:2307730-2307749 Msa0829390:three_prime_UTR 40.0%
TTGGCACTTATCATATGGCA+CGG - chr5_4:2307843-2307862 None:intergenic 40.0%
!! GGTTTCTTGTCAGGTATTGA+AGG + chr5_4:2308250-2308269 Msa0829390:three_prime_UTR 40.0%
CATCCGATCACCCAAATAAA+AGG - chr5_4:2308322-2308341 None:intergenic 40.0%
AGCAGAACTTATCAATAGGC+GGG - chr5_4:2308436-2308455 None:intergenic 40.0%
GCCCTGCAAAAGTAAAAGTA+TGG - chr5_4:2308784-2308803 None:intergenic 40.0%
TGGGTATGTTCCTTAGATAG+TGG - chr5_4:2308834-2308853 None:intergenic 40.0%
TACACTGAAGCAGCATAACT+AGG - chr5_4:2309010-2309029 None:intergenic 40.0%
CTGCTTCAGTGTAAGAATCT+TGG + chr5_4:2309017-2309036 Msa0829390:three_prime_UTR 40.0%
! CATCCGATACCTTTGATAGT+GGG + chr5_4:2309169-2309188 Msa0829390:three_prime_UTR 40.0%
!! ATCCGATACCTTTGATAGTG+GGG + chr5_4:2309170-2309189 Msa0829390:three_prime_UTR 40.0%
ATTGTGTTCGTCCATATGCA+GGG - chr5_4:2309254-2309273 None:intergenic 40.0%
CTGTTGGAAAAGTTGAAGGT+TGG + chr5_4:2309291-2309310 Msa0829390:three_prime_UTR 40.0%
CTTGAGAAAGTCTTGCAGTA+AGG + chr5_4:2309357-2309376 Msa0829390:three_prime_UTR 40.0%
ATATGAATGTCAGTCCGACA+AGG + chr5_4:2309446-2309465 Msa0829390:three_prime_UTR 40.0%
TGCTATCCAAAAGACCTTGT+CGG - chr5_4:2309463-2309482 None:intergenic 40.0%
CTAGCACAAAACACTGATCA+GGG - chr5_4:2309533-2309552 None:intergenic 40.0%
ACTAGCACAAAACACTGATC+AGG - chr5_4:2309534-2309553 None:intergenic 40.0%
! ATCAGTGTTTTGTGCTAGTC+TGG + chr5_4:2309535-2309554 Msa0829390:three_prime_UTR 40.0%
!! TGTTTTGTGCTAGTCTGGAT+GGG + chr5_4:2309540-2309559 Msa0829390:three_prime_UTR 40.0%
! AGAGCAGACATTTTTCTGGA+TGG + chr5_4:2309577-2309596 Msa0829390:three_prime_UTR 40.0%
ATACCAACGAAAACAACCCT+AGG - chr5_4:2309747-2309766 None:intergenic 40.0%
! GGTGTCAAAACATTGAGTTG+AGG - chr5_4:2309979-2309998 None:intergenic 40.0%
ATCAATGAGTGGTTCGTTAC+TGG + chr5_4:2310121-2310140 Msa0829390:three_prime_UTR 40.0%
AAGATCGGAAGTGGATCCTT+CGG + chr5_4:2303849-2303868 Msa0829390:CDS 45.0%
ACCGAGGTAAATTTCACCGA+AGG - chr5_4:2303868-2303887 None:intergenic 45.0%
GGTATCAATATGCGTAGCTG+CGG - chr5_4:2303976-2303995 None:intergenic 45.0%
! GATTTCGTGTTTCTTGGTGC+AGG + chr5_4:2304313-2304332 Msa0829390:intron 45.0%
GTGGCATTCCAGGCTTAAAA+TGG + chr5_4:2304335-2304354 Msa0829390:CDS 45.0%
! ATGGTTTGGCATAGATAGGG+AGG + chr5_4:2304354-2304373 Msa0829390:CDS 45.0%
AGTCCCATGAGGAAGTTATC+GGG - chr5_4:2304648-2304667 None:intergenic 45.0%
GATAACTTCCTCATGGGACT+TGG + chr5_4:2304648-2304667 Msa0829390:CDS 45.0%
GCAACAAGTAGTTGACTGAC+GGG - chr5_4:2304725-2304744 None:intergenic 45.0%
CCACTTAGTGGAATAAGGCT+TGG - chr5_4:2304804-2304823 None:intergenic 45.0%
!! CCAAGCCTTATTCCACTAAG+TGG + chr5_4:2304801-2304820 Msa0829390:intron 45.0%
CTTATTCCACTAAGTGGGGT+CGG + chr5_4:2304807-2304826 Msa0829390:intron 45.0%
!! TTGGGCTAGCAAAACGGTAT+CGG + chr5_4:2304930-2304949 Msa0829390:CDS 45.0%
AGAACTACCTGTAAGGGATG+TGG - chr5_4:2304973-2304992 None:intergenic 45.0%
GCAAAGTAGACGGGATGATT+TGG + chr5_4:2305282-2305301 Msa0829390:CDS 45.0%
! CGGGATGATTTGGAATCACT+AGG + chr5_4:2305292-2305311 Msa0829390:CDS 45.0%
GAATGCCATACCTTCCTCTA+AGG - chr5_4:2305336-2305355 None:intergenic 45.0%
! TTGTTTAGCCTTCCTTGGCA+AGG + chr5_4:2305457-2305476 Msa0829390:intron 45.0%
TTACTTTATTCAGGGGGGAG+GGG - chr5_4:2305589-2305608 None:intergenic 45.0%
TTTGATCAGCGGCCTGATTA+TGG + chr5_4:2305711-2305730 Msa0829390:CDS 45.0%
AGAGACCTATTTGCTCGTGA+AGG + chr5_4:2305753-2305772 Msa0829390:CDS 45.0%
TTCAAAGAGGTCATGTGGCA+AGG + chr5_4:2306130-2306149 Msa0829390:intron 45.0%
TAACCGTCATGCAGTAGCAA+TGG + chr5_4:2306566-2306585 Msa0829390:CDS 45.0%
CATCCATTGCTACTGCATGA+CGG - chr5_4:2306572-2306591 None:intergenic 45.0%
TTGTTGACAACCTGCAAGGT+TGG + chr5_4:2306729-2306748 Msa0829390:intron 45.0%
GTCCTGTCTTAGAAGATGGA+TGG + chr5_4:2306777-2306796 Msa0829390:intron 45.0%
TCATGCATATTCAGGGCATG+GGG + chr5_4:2306885-2306904 Msa0829390:intron 45.0%
!! TCAGGAAATGCTACTGGTTC+TGG + chr5_4:2306922-2306941 Msa0829390:CDS 45.0%
GTTCAGTTCAAATCACCAGC+CGG + chr5_4:2306952-2306971 Msa0829390:CDS 45.0%
CTCCTGCTGGTACTTCAAAA+AGG + chr5_4:2307178-2307197 Msa0829390:CDS 45.0%
CAGACAAGGCAAGGTTTAAG+GGG - chr5_4:2307206-2307225 None:intergenic 45.0%
GCAGACAAGGCAAGGTTTAA+GGG - chr5_4:2307207-2307226 None:intergenic 45.0%
AGCAGACAAGGCAAGGTTTA+AGG - chr5_4:2307208-2307227 None:intergenic 45.0%
AACCTTCCAACACTGGACAT+GGG + chr5_4:2307229-2307248 Msa0829390:CDS 45.0%
CATGGGCAAGCCAGTAAAAT+TGG + chr5_4:2307246-2307265 Msa0829390:CDS 45.0%
GATGACATCCAGCTACTTGA+AGG - chr5_4:2307273-2307292 None:intergenic 45.0%
! CGCATCTTTCCCAAAGTGTT+TGG + chr5_4:2307533-2307552 Msa0829390:three_prime_UTR 45.0%
TGACATCTATGTACAGCACC+GGG - chr5_4:2307726-2307745 None:intergenic 45.0%
CTGACATCTATGTACAGCAC+CGG - chr5_4:2307727-2307746 None:intergenic 45.0%
TGGCACTTATCATATGGCAC+GGG - chr5_4:2307842-2307861 None:intergenic 45.0%
! CTGCGTTGGCACTTATCATA+TGG - chr5_4:2307848-2307867 None:intergenic 45.0%
!! CAGGTATTGAAGGCAGTTCT+TGG + chr5_4:2308260-2308279 Msa0829390:three_prime_UTR 45.0%
GTATTGAAGGCAGTTCTTGG+TGG + chr5_4:2308263-2308282 Msa0829390:three_prime_UTR 45.0%
AACTTATCAATAGGCGGGAC+AGG - chr5_4:2308431-2308450 None:intergenic 45.0%
TTCTGGATGAGAATACGCCA+AGG + chr5_4:2308892-2308911 Msa0829390:three_prime_UTR 45.0%
!! CCACTATCAAAGGTATCGGA+TGG - chr5_4:2309171-2309190 None:intergenic 45.0%
CCATCCGATACCTTTGATAG+TGG + chr5_4:2309168-2309187 Msa0829390:three_prime_UTR 45.0%
!!! TGTTTTGGCCCCACTATCAA+AGG - chr5_4:2309181-2309200 None:intergenic 45.0%
TATGCAGGGATATGGGATTG+TGG - chr5_4:2309240-2309259 None:intergenic 45.0%
CAATCCCATATCCCTGCATA+TGG + chr5_4:2309240-2309259 Msa0829390:three_prime_UTR 45.0%
TCGTCCATATGCAGGGATAT+GGG - chr5_4:2309247-2309266 None:intergenic 45.0%
TTCGTCCATATGCAGGGATA+TGG - chr5_4:2309248-2309267 None:intergenic 45.0%
GATTGTGTTCGTCCATATGC+AGG - chr5_4:2309255-2309274 None:intergenic 45.0%
!! GTGTTTTGTGCTAGTCTGGA+TGG + chr5_4:2309539-2309558 Msa0829390:three_prime_UTR 45.0%
AAGGCGCGTTCATTTAGTGA+TGG + chr5_4:2309682-2309701 Msa0829390:three_prime_UTR 45.0%
! TAGAAGGTGTGAAGCGTTTG+TGG - chr5_4:2309923-2309942 None:intergenic 45.0%
!!! CAAAGGAGGCGTTTTTCACA+TGG - chr5_4:2310059-2310078 None:intergenic 45.0%
CATGTGAAAAACGCCTCCTT+TGG + chr5_4:2310057-2310076 Msa0829390:three_prime_UTR 45.0%
TCCACTTCACTTACCAAAGG+AGG - chr5_4:2310073-2310092 None:intergenic 45.0%
TACAAGCTTGGCCGCAAGAT+CGG + chr5_4:2303834-2303853 Msa0829390:CDS 50.0%
AGGATCCACTTCCGATCTTG+CGG - chr5_4:2303848-2303867 None:intergenic 50.0%
AAGAGAGAGGATAGTCACCG+AGG - chr5_4:2303884-2303903 None:intergenic 50.0%
TTTGACGGCGACGATTTCGA+AGG - chr5_4:2303997-2304016 None:intergenic 50.0%
! GCATCCACAGTTGCTTTACG+AGG + chr5_4:2304186-2304205 Msa0829390:CDS 50.0%
TTGGCCTCGTAAAGCAACTG+TGG - chr5_4:2304193-2304212 None:intergenic 50.0%
! TTCGTGTTTCTTGGTGCAGG+TGG + chr5_4:2304316-2304335 Msa0829390:intron 50.0%
! ACTTCCTCATGGGACTTGGT+CGG + chr5_4:2304652-2304671 Msa0829390:CDS 50.0%
! ACTGACGGGCAAGTTCAACT+GGG - chr5_4:2304711-2304730 None:intergenic 50.0%
CGACCCCACTTAGTGGAATA+AGG - chr5_4:2304809-2304828 None:intergenic 50.0%
!! TGGGCTAGCAAAACGGTATC+GGG + chr5_4:2304931-2304950 Msa0829390:CDS 50.0%
! TCTTGAGAAACAGCGGGTTC+TGG - chr5_4:2305391-2305410 None:intergenic 50.0%
CCTTCCTTGGCAAGGTCTAA+GGG + chr5_4:2305465-2305484 Msa0829390:CDS 50.0%
!! GAAGGTATCGACTCCTATCG+AGG + chr5_4:2305528-2305547 Msa0829390:CDS 50.0%
TACTTTATTCAGGGGGGAGG+GGG - chr5_4:2305588-2305607 None:intergenic 50.0%
! GCAATTGTTTCTTGGGGGCA+TGG + chr5_4:2305839-2305858 Msa0829390:intron 50.0%
GTCATGTGGCAAGGACATTG+AGG + chr5_4:2306139-2306158 Msa0829390:intron 50.0%
ATGTGGCAAGGACATTGAGG+AGG + chr5_4:2306142-2306161 Msa0829390:intron 50.0%
TGGGACTGAGGGGTTACTAA+TGG + chr5_4:2306469-2306488 Msa0829390:intron 50.0%
TCTTTACCACAGCCAGTTCC+TGG + chr5_4:2306537-2306556 Msa0829390:intron 50.0%
! ACCTGCAAGGTTGGCTGAAT+CGG + chr5_4:2306738-2306757 Msa0829390:intron 50.0%
GGGGAAGAGCGAATTAGATC+AGG + chr5_4:2306904-2306923 Msa0829390:CDS 50.0%
GAACTCAAGTTTCTACCGGC+TGG - chr5_4:2306970-2306989 None:intergenic 50.0%
! AGCAGGAGCATAAGAAGCAG+AGG - chr5_4:2307166-2307185 None:intergenic 50.0%
TCTGCTTCTTATGCTCCTGC+TGG + chr5_4:2307165-2307184 Msa0829390:CDS 50.0%
AAGGTTCAGCAGACAAGGCA+AGG - chr5_4:2307215-2307234 None:intergenic 50.0%
GTTGGAAGGTTCAGCAGACA+AGG - chr5_4:2307220-2307239 None:intergenic 50.0%
TCTGCTGAACCTTCCAACAC+TGG + chr5_4:2307222-2307241 Msa0829390:CDS 50.0%
GAACCTTCCAACACTGGACA+TGG + chr5_4:2307228-2307247 Msa0829390:CDS 50.0%
GATATGTGAAGCTGCACACG+TGG + chr5_4:2307504-2307523 Msa0829390:three_prime_UTR 50.0%
GGCACTTATCATATGGCACG+GGG - chr5_4:2307841-2307860 None:intergenic 50.0%
TGATAAGTGCCAACGCAGCT+TGG + chr5_4:2307850-2307869 Msa0829390:three_prime_UTR 50.0%
GCACAATTTGACACTTGCCC+AGG + chr5_4:2308612-2308631 Msa0829390:three_prime_UTR 50.0%
ATCAGAAGCAGCAGCGTCAT+GGG - chr5_4:2308853-2308872 None:intergenic 50.0%
! GTGCAAAGTATCCCCCTATC+TGG + chr5_4:2309109-2309128 Msa0829390:three_prime_UTR 50.0%
! GGCCCCACTATCAAAGGTAT+CGG - chr5_4:2309175-2309194 None:intergenic 50.0%
GGGATTGTGGAACCATCGAT+TGG - chr5_4:2309227-2309246 None:intergenic 50.0%
! GTCAGTCCGACAAGGTCTTT+TGG + chr5_4:2309454-2309473 Msa0829390:three_prime_UTR 50.0%
GATGGAAACCACGTATGTGC+AGG + chr5_4:2309700-2309719 Msa0829390:three_prime_UTR 50.0%
CAAAGAGTCCTGCACATACG+TGG - chr5_4:2309711-2309730 None:intergenic 50.0%
CACGTATGTGCAGGACTCTT+TGG + chr5_4:2309709-2309728 Msa0829390:three_prime_UTR 50.0%
GTATGTGCAGGACTCTTTGG+AGG + chr5_4:2309712-2309731 Msa0829390:three_prime_UTR 50.0%
!! CAGGACTCTTTGGAGGCATT+TGG + chr5_4:2309719-2309738 Msa0829390:three_prime_UTR 50.0%
!! TTTGGAGGCATTTGGCACCT+AGG + chr5_4:2309727-2309746 Msa0829390:three_prime_UTR 50.0%
!! TTGGAGGCATTTGGCACCTA+GGG + chr5_4:2309728-2309747 Msa0829390:three_prime_UTR 50.0%
!! GCACCTAGGGTTGTTTTCGT+TGG + chr5_4:2309741-2309760 Msa0829390:three_prime_UTR 50.0%
! AAGTCACCGTGCCACGTTTT+CGG - chr5_4:2309823-2309842 None:intergenic 50.0%
CTTGCGTGTCTCCCTTTGAT+TGG + chr5_4:2309864-2309883 Msa0829390:three_prime_UTR 50.0%
! GTGTGAAGCGTTTGTGGAAG+AGG - chr5_4:2309917-2309936 None:intergenic 50.0%
GCCTCCTTTGGTAAGTGAAG+TGG + chr5_4:2310069-2310088 Msa0829390:three_prime_UTR 50.0%
! GACTGACGGGCAAGTTCAAC+TGG - chr5_4:2304712-2304731 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr5_4:2304816-2304835 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr5_4:2304815-2304834 Msa0829390:intron 55.0%
! AGGGATGTGGCGATTGGTTG+TGG - chr5_4:2304960-2304979 None:intergenic 55.0%
CCTGTAAGGGATGTGGCGAT+TGG - chr5_4:2304966-2304985 None:intergenic 55.0%
CCAATCGCCACATCCCTTAC+AGG + chr5_4:2304963-2304982 Msa0829390:CDS 55.0%
GCCTTCCTTGGCAAGGTCTA+AGG + chr5_4:2305464-2305483 Msa0829390:intron 55.0%
CCCTTAGACCTTGCCAAGGA+AGG - chr5_4:2305468-2305487 None:intergenic 55.0%
CGGTTACTTGCACCAGGAAC+TGG - chr5_4:2306552-2306571 None:intergenic 55.0%
GCATGACGGTTACTTGCACC+AGG - chr5_4:2306558-2306577 None:intergenic 55.0%
TCCGATTCAGCCAACCTTGC+AGG - chr5_4:2306742-2306761 None:intergenic 55.0%
! TGCCCATGTCCAGTGTTGGA+AGG - chr5_4:2307234-2307253 None:intergenic 55.0%
CATGGAGACTGTGACTGTGC+TGG + chr5_4:2307586-2307605 Msa0829390:three_prime_UTR 55.0%
GAGACTGTGACTGTGCTGGA+AGG + chr5_4:2307590-2307609 Msa0829390:three_prime_UTR 55.0%
CTGTGACTGTGCTGGAAGGT+TGG + chr5_4:2307594-2307613 Msa0829390:three_prime_UTR 55.0%
CATCAGAAGCAGCAGCGTCA+TGG - chr5_4:2308854-2308873 None:intergenic 55.0%
ATGAGCGCATCCCGAAAACG+TGG + chr5_4:2309809-2309828 Msa0829390:three_prime_UTR 55.0%
! AGTCACCGTGCCACGTTTTC+GGG - chr5_4:2309822-2309841 None:intergenic 55.0%
GTTGGCGGCAGCTACAAGCT+TGG + chr5_4:2303822-2303841 Msa0829390:CDS 60.0%
CTTGGCCGCAAGATCGGAAG+TGG + chr5_4:2303840-2303859 Msa0829390:CDS 60.0%
! CTTGGTGCAGGTGGCATTCC+AGG + chr5_4:2304325-2304344 Msa0829390:intron 60.0%
CCTTCCGACCAAGTCCCATG+AGG - chr5_4:2304659-2304678 None:intergenic 60.0%
! CCTCATGGGACTTGGTCGGA+AGG + chr5_4:2304656-2304675 Msa0829390:CDS 60.0%
ACTTGGTCGGAAGGCCAACC+AGG + chr5_4:2304665-2304684 Msa0829390:CDS 60.0%
GACGGGCAAGTTCAACTGGG+TGG - chr5_4:2304708-2304727 None:intergenic 60.0%
GCAGCCCTTAGACCTTGCCA+AGG - chr5_4:2305472-2305491 None:intergenic 60.0%
CTTGCACCAGGAACTGGCTG+TGG - chr5_4:2306546-2306565 None:intergenic 60.0%
GGCTTGCCCATGTCCAGTGT+TGG - chr5_4:2307238-2307257 None:intergenic 60.0%
GACTATCCAGGCTTGGGTCC+CGG + chr5_4:2307705-2307724 Msa0829390:three_prime_UTR 60.0%
CGCATCCCGAAAACGTGGCA+CGG + chr5_4:2309814-2309833 Msa0829390:three_prime_UTR 60.0%
! ACAGCACCGGGACCCAAGCC+TGG - chr5_4:2307714-2307733 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 2303810 2310225 2303810 ID=Msa0829390;Name=Msa0829390
chr5_4 mRNA 2303810 2310225 2303810 ID=Msa0829390-mRNA-1;Parent=Msa0829390;Name=Msa0829390-mRNA-1;_AED=0.10;_eAED=0.11;_QI=0|1|0.93|1|0.85|0.8|15|2681|455
chr5_4 exon 2303810 2304019 2303810 ID=Msa0829390-mRNA-1:exon:757;Parent=Msa0829390-mRNA-1
chr5_4 exon 2304169 2304238 2304169 ID=Msa0829390-mRNA-1:exon:758;Parent=Msa0829390-mRNA-1
chr5_4 exon 2304335 2304483 2304335 ID=Msa0829390-mRNA-1:exon:759;Parent=Msa0829390-mRNA-1
chr5_4 exon 2304591 2304686 2304591 ID=Msa0829390-mRNA-1:exon:760;Parent=Msa0829390-mRNA-1
chr5_4 exon 2304914 2304984 2304914 ID=Msa0829390-mRNA-1:exon:761;Parent=Msa0829390-mRNA-1
chr5_4 exon 2305134 2305195 2305134 ID=Msa0829390-mRNA-1:exon:762;Parent=Msa0829390-mRNA-1
chr5_4 exon 2305281 2305344 2305281 ID=Msa0829390-mRNA-1:exon:763;Parent=Msa0829390-mRNA-1
chr5_4 exon 2305465 2305549 2305465 ID=Msa0829390-mRNA-1:exon:764;Parent=Msa0829390-mRNA-1
chr5_4 exon 2305648 2305774 2305648 ID=Msa0829390-mRNA-1:exon:765;Parent=Msa0829390-mRNA-1
chr5_4 exon 2306322 2306404 2306322 ID=Msa0829390-mRNA-1:exon:766;Parent=Msa0829390-mRNA-1
chr5_4 exon 2306549 2306606 2306549 ID=Msa0829390-mRNA-1:exon:767;Parent=Msa0829390-mRNA-1
chr5_4 exon 2306899 2307011 2306899 ID=Msa0829390-mRNA-1:exon:768;Parent=Msa0829390-mRNA-1
chr5_4 exon 2307141 2307332 2307141 ID=Msa0829390-mRNA-1:exon:769;Parent=Msa0829390-mRNA-1
chr5_4 exon 2307457 2308700 2307457 ID=Msa0829390-mRNA-1:exon:770;Parent=Msa0829390-mRNA-1
chr5_4 exon 2308801 2310225 2308801 ID=Msa0829390-mRNA-1:exon:771;Parent=Msa0829390-mRNA-1
chr5_4 CDS 2303810 2304019 2303810 ID=Msa0829390-mRNA-1:cds;Parent=Msa0829390-mRNA-1
chr5_4 CDS 2304169 2304238 2304169 ID=Msa0829390-mRNA-1:cds;Parent=Msa0829390-mRNA-1
chr5_4 CDS 2304335 2304483 2304335 ID=Msa0829390-mRNA-1:cds;Parent=Msa0829390-mRNA-1
chr5_4 CDS 2304591 2304686 2304591 ID=Msa0829390-mRNA-1:cds;Parent=Msa0829390-mRNA-1
chr5_4 CDS 2304914 2304984 2304914 ID=Msa0829390-mRNA-1:cds;Parent=Msa0829390-mRNA-1
chr5_4 CDS 2305134 2305195 2305134 ID=Msa0829390-mRNA-1:cds;Parent=Msa0829390-mRNA-1
chr5_4 CDS 2305281 2305344 2305281 ID=Msa0829390-mRNA-1:cds;Parent=Msa0829390-mRNA-1
chr5_4 CDS 2305465 2305549 2305465 ID=Msa0829390-mRNA-1:cds;Parent=Msa0829390-mRNA-1
chr5_4 CDS 2305648 2305774 2305648 ID=Msa0829390-mRNA-1:cds;Parent=Msa0829390-mRNA-1
chr5_4 CDS 2306322 2306404 2306322 ID=Msa0829390-mRNA-1:cds;Parent=Msa0829390-mRNA-1
chr5_4 CDS 2306549 2306606 2306549 ID=Msa0829390-mRNA-1:cds;Parent=Msa0829390-mRNA-1
chr5_4 CDS 2306899 2307011 2306899 ID=Msa0829390-mRNA-1:cds;Parent=Msa0829390-mRNA-1
chr5_4 CDS 2307141 2307320 2307141 ID=Msa0829390-mRNA-1:cds;Parent=Msa0829390-mRNA-1
chr5_4 three_prime_UTR 2307321 2307332 2307321 ID=Msa0829390-mRNA-1:three_prime_utr;Parent=Msa0829390-mRNA-1
chr5_4 three_prime_UTR 2307457 2308700 2307457 ID=Msa0829390-mRNA-1:three_prime_utr;Parent=Msa0829390-mRNA-1
chr5_4 three_prime_UTR 2308801 2310225 2308801 ID=Msa0829390-mRNA-1:three_prime_utr;Parent=Msa0829390-mRNA-1
Gene Sequence

>Msa0829390

ATGGAGCGCATCGTTGGCGGCAGCTACAAGCTTGGCCGCAAGATCGGAAGTGGATCCTTCGGTGAAATTTACCTCGGTGACTATCCTCTCTCTTCCGTTCTTCTTTTCATTCACAACGATTCTTTCTTTATTCTTATCACTCTTTTAACGTTTTCATTTCTCTCCGCAGCTACGCATATTGATACCTTCGAAATCGTCGCCGTCAAAATCGAGAATAGTAAAACAAAGCATCCACAGTTGCTTTACGAGGCCAAGCTCTACAATATTCTTCAAGGAGGAAGTGGCATTCCAGGCTTAAAATGGTTTGGCATAGATAGGGAGGATAACGTGCTTGCTATCGATTTACTTGGGCCTAGTCTTGAAGATCTTTTTGTTTATTGTGGAAGGAAGTTTTCGTTGAAGACTGTGTTAATGTTAGCTGATCAAATGATCACTAGAATTGAATATGTGCATTCTAAAGGATATTTGCATAGGGATATTAAACCCGATAACTTCCTCATGGGACTTGGTCGGAAGGCCAACCAGGTTTACATAATTGATTTTGGGCTAGCAAAACGGTATCGGGAATCCACAACCAATCGCCACATCCCTTACAGGGAGAACAAAAGCTTAACAGGGACTGCTCGATATGCAAGTTGCAATACTCATCTTGGGATTGAGCAAAGTAGACGGGATGATTTGGAATCACTAGGATATGTACTTCTGTACTTCCTTAGAGGAAGCCTTCCTTGGCAAGGTCTAAGGGCTGCAACAAAGAAACAGAAGTATGAAAAAATATGTCAGAAGAAGGTATCGACTCCTATCGAGGTACTATGCAAATCTCATCCAGTAGAGTTTGCTTCATACTTCCATTACTGCCACTCATTGACATTTGATCAGCGGCCTGATTATGGATTCTTGAAGCGCTTATTTAGAGACCTATTTGCTCGTGAAGGCTATGAATTTGATTTCGTTTTTGATTGGACCATTTTAAAGTATCAGCAATCACAGAAGAATTTAGTTCAGCCTTCCTTATCTCCAGTTCCTGGTGCAAGTAACCGTCATGCAGTAGCAATGGATGTTGACAATCATCAAGGGCATGGGGAAGAGCGAATTAGATCAGGAAATGCTACTGGTTCTGGTGTTAAAGTTCAGTTCAAATCACCAGCCGGTAGAAACTTGAGTTCTGACAATCCTCGTGACAAGAATATTTTTGGAGAAGCAAATATGGCCTCTGCTTCTTATGCTCCTGCTGGTACTTCAAAAAGGAACCCCTTAAACCTTGCCTTGTCTGCTGAACCTTCCAACACTGGACATGGGCAAGCCAGTAAAATTGGACCTTCAAGTAGCTGGATGTCATCTCTGCAGCGCATATCTTCTTCCAAATGA
Protein sequence

>Msa0829390

MERIVGGSYKLGRKIGSGSFGEIYLGDYPLSSVLLFIHNDSFFILITLLTFSFLSAATHIDTFEIVAVKIENSKTKHPQLLYEAKLYNILQGGSGIPGLKWFGIDREDNVLAIDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGYLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRESTTNRHIPYRENKSLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLRAATKKQKYEKICQKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFAREGYEFDFVFDWTILKYQQSQKNLVQPSLSPVPGASNRHAVAMDVDNHQGHGEERIRSGNATGSGVKVQFKSPAGRNLSSDNPRDKNIFGEANMASASYAPAGTSKRNPLNLALSAEPSNTGHGQASKIGPSSSWMSSLQRISSSK*