Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833430 | AES94268.1 | 85.461 | 282 | 21 | 4 | 1 | 282 | 1 | 262 | 2.68e-165 | 469 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833430 | sp|Q9M202|ZAT9_ARATH | 29.755 | 326 | 133 | 12 | 1 | 280 | 1 | 276 | 1.03e-24 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833430 | G7JW35 | 85.461 | 282 | 21 | 4 | 1 | 282 | 1 | 262 | 1.28e-165 | 469 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0833430 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833430 | MtrunA17_Chr5g0399261 | 85.461 | 282 | 21 | 4 | 1 | 282 | 5 | 266 | 3.18e-169 | 469 |
| Msa0833430 | MtrunA17_Chr4g0056091 | 42.724 | 323 | 118 | 13 | 1 | 279 | 1 | 300 | 3.15e-58 | 188 |
| Msa0833430 | MtrunA17_Chr7g0231181 | 32.184 | 348 | 157 | 12 | 1 | 280 | 1 | 337 | 5.89e-38 | 137 |
| Msa0833430 | MtrunA17_Chr4g0012691 | 28.399 | 331 | 133 | 11 | 1 | 259 | 2 | 300 | 2.38e-23 | 98.2 |
| Msa0833430 | MtrunA17_Chr4g0018761 | 27.138 | 269 | 141 | 12 | 6 | 260 | 9 | 236 | 3.25e-16 | 76.3 |
| Msa0833430 | MtrunA17_Chr3g0079061 | 28.125 | 288 | 154 | 12 | 6 | 264 | 8 | 271 | 1.36e-13 | 69.3 |
| Msa0833430 | MtrunA17_Chr3g0079131 | 24.483 | 290 | 160 | 11 | 3 | 260 | 5 | 267 | 2.21e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833430 | AT3G60580.1 | 29.755 | 326 | 133 | 12 | 1 | 280 | 1 | 276 | 1.04e-25 | 103 |
| Msa0833430 | AT4G16610.1 | 34.536 | 194 | 94 | 5 | 3 | 191 | 4 | 169 | 1.17e-21 | 90.5 |
| Msa0833430 | AT1G02030.1 | 28.144 | 334 | 108 | 16 | 2 | 282 | 3 | 257 | 2.57e-21 | 90.9 |
| Msa0833430 | AT2G45120.1 | 30.526 | 285 | 152 | 8 | 1 | 259 | 1 | 265 | 1.03e-19 | 87.4 |
Find 43 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGTACTACTACTGTTTGT+TGG | 0.284162 | 5_4:-6555769 | None:intergenic |
| GTTATAGCAGCTTCTTCTTC+AGG | 0.287165 | 5_4:-6556064 | None:intergenic |
| AGAAGATGAAAATGAGAGTA+TGG | 0.289041 | 5_4:-6555729 | None:intergenic |
| GTGAGATTGTGTTTGTGGTT+GGG | 0.304906 | 5_4:-6555687 | None:intergenic |
| TTTGGTTCTTATCAAGCATT+AGG | 0.305236 | 5_4:+6556313 | Msa0833430:CDS |
| TGATGCTATCAAGAGATAAA+TGG | 0.312199 | 5_4:+6556092 | Msa0833430:CDS |
| TGAGATTGTGTTTGTGGTTG+GGG | 0.323538 | 5_4:-6555686 | None:intergenic |
| AAAAGTGAAGTAACAGGTTC+TGG | 0.326984 | 5_4:-6556031 | None:intergenic |
| TCTGGTTCAGTTTCTGTTAG+TGG | 0.341539 | 5_4:-6556013 | None:intergenic |
| GGTGAGATTGTGTTTGTGGT+TGG | 0.402930 | 5_4:-6555688 | None:intergenic |
| TGTTGTTGAGAAAGAAAACT+TGG | 0.417388 | 5_4:-6555864 | None:intergenic |
| GTGTGGTGAGATTGTGTTTG+TGG | 0.419011 | 5_4:-6555692 | None:intergenic |
| ATGAAAAGAGTCTAATGTAT+AGG | 0.419874 | 5_4:+6555801 | Msa0833430:CDS |
| TTGAGTTGGGTTCTTTGACT+TGG | 0.422339 | 5_4:-6555918 | None:intergenic |
| TCTTCTTCCAAGATGGATAG+AGG | 0.427918 | 5_4:-6556354 | None:intergenic |
| AATCTCACCTCTATCCATCT+TGG | 0.444489 | 5_4:+6556347 | Msa0833430:CDS |
| TTCATCAATGGTAAAGCATT+GGG | 0.449808 | 5_4:+6555614 | Msa0833430:CDS |
| TTATAGCAGCTTCTTCTTCA+GGG | 0.455323 | 5_4:-6556063 | None:intergenic |
| ATTATAAATGTGACAAATGT+GGG | 0.460652 | 5_4:+6556161 | Msa0833430:CDS |
| GAAGAAGAACAAGAAGTTTG+TGG | 0.463316 | 5_4:+6556136 | Msa0833430:CDS |
| AAGAAGAACAAGAAGTTTGT+GGG | 0.463576 | 5_4:+6556137 | Msa0833430:CDS |
| ATTCATCAATGGTAAAGCAT+TGG | 0.467655 | 5_4:+6555613 | Msa0833430:CDS |
| TGCTCAAGAACATTCATCAA+TGG | 0.467969 | 5_4:+6555602 | Msa0833430:CDS |
| TGGAAGAGGAAGAGGGAGGG+TGG | 0.478080 | 5_4:-6555660 | None:intergenic |
| GAGAGTATGGTAGAAGAAGT+AGG | 0.483653 | 5_4:-6555716 | None:intergenic |
| CTTTAGAAGTTCACAAGCAA+TGG | 0.490495 | 5_4:+6556192 | Msa0833430:CDS |
| GGTTTGGAAGAGGAAGAGGG+AGG | 0.491265 | 5_4:-6555664 | None:intergenic |
| AAGTTGAAAAGTGAAGTAAC+AGG | 0.534456 | 5_4:-6556037 | None:intergenic |
| GTTGTTGAGAAAGAAAACTT+GGG | 0.543214 | 5_4:-6555863 | None:intergenic |
| GGATCATCTTCTTATGATGA+AGG | 0.547481 | 5_4:-6556415 | None:intergenic |
| TGGTAGAAGAAGTAGGAGTG+TGG | 0.559870 | 5_4:-6555709 | None:intergenic |
| AATTATAAATGTGACAAATG+TGG | 0.560495 | 5_4:+6556160 | Msa0833430:CDS |
| GTTTGGAAGAGGAAGAGGGA+GGG | 0.560895 | 5_4:-6555663 | None:intergenic |
| AGCATTGGGTGGACACATGA+AGG | 0.563543 | 5_4:+6555628 | Msa0833430:CDS |
| GAGATTGTGTTTGTGGTTGG+GGG | 0.564499 | 5_4:-6555685 | None:intergenic |
| TATAGCAGCTTCTTCTTCAG+GGG | 0.571162 | 5_4:-6556062 | None:intergenic |
| CCTTAGGACAAAACACACAT+TGG | 0.573593 | 5_4:-6556288 | None:intergenic |
| ATCTCTTGATAGCATCATGA+GGG | 0.581541 | 5_4:-6556086 | None:intergenic |
| GGTTCTTATCAAGCATTAGG+TGG | 0.596035 | 5_4:+6556316 | Msa0833430:CDS |
| ATCAATGGTAAAGCATTGGG+TGG | 0.611558 | 5_4:+6555617 | Msa0833430:CDS |
| TATCTCTTGATAGCATCATG+AGG | 0.628708 | 5_4:-6556087 | None:intergenic |
| GTAGTTAGTGCCAAATGGAG+AGG | 0.644078 | 5_4:+6555564 | None:intergenic |
| TCATCTTCTTATGATGAAGG+TGG | 0.658652 | 5_4:-6556412 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAAGTTTGAAACTTTTTTT+GGG | - | chr5_4:6555839-6555858 | None:intergenic | 20.0% |
| !!! | TGAAAGTTTGAAACTTTTTT+TGG | - | chr5_4:6555840-6555859 | None:intergenic | 20.0% |
| !! | AATTATAAATGTGACAAATG+TGG | + | chr5_4:6556160-6556179 | Msa0833430:CDS | 20.0% |
| !! | ATTATAAATGTGACAAATGT+GGG | + | chr5_4:6556161-6556180 | Msa0833430:CDS | 20.0% |
| !!! | ATTGGAATATTTTATGATCA+CGG | - | chr5_4:6556273-6556292 | None:intergenic | 20.0% |
| !!! | GAAAGTTTGAAACTTTTTTT+GGG | - | chr5_4:6555839-6555858 | None:intergenic | 20.0% |
| !!! | TGAAAGTTTGAAACTTTTTT+TGG | - | chr5_4:6555840-6555859 | None:intergenic | 20.0% |
| !! | AATTATAAATGTGACAAATG+TGG | + | chr5_4:6556160-6556179 | Msa0833430:CDS | 20.0% |
| !! | ATTATAAATGTGACAAATGT+GGG | + | chr5_4:6556161-6556180 | Msa0833430:CDS | 20.0% |
| !!! | ATTGGAATATTTTATGATCA+CGG | - | chr5_4:6556273-6556292 | None:intergenic | 20.0% |
| ! | ATGAAAAGAGTCTAATGTAT+AGG | + | chr5_4:6555801-6555820 | Msa0833430:CDS | 25.0% |
| ! | ATGAAAAGAGTCTAATGTAT+AGG | + | chr5_4:6555801-6555820 | Msa0833430:CDS | 25.0% |
| ATTCATCAATGGTAAAGCAT+TGG | + | chr5_4:6555613-6555632 | Msa0833430:CDS | 30.0% | |
| ! | TTCATCAATGGTAAAGCATT+GGG | + | chr5_4:6555614-6555633 | Msa0833430:CDS | 30.0% |
| AGAAGATGAAAATGAGAGTA+TGG | - | chr5_4:6555732-6555751 | None:intergenic | 30.0% | |
| TTTGTACTACTACTGTTTGT+TGG | - | chr5_4:6555772-6555791 | None:intergenic | 30.0% | |
| GTTGTTGAGAAAGAAAACTT+GGG | - | chr5_4:6555866-6555885 | None:intergenic | 30.0% | |
| TGTTGTTGAGAAAGAAAACT+TGG | - | chr5_4:6555867-6555886 | None:intergenic | 30.0% | |
| !!! | TGAGTTTTCGTTTTTGAGTT+GGG | - | chr5_4:6555934-6555953 | None:intergenic | 30.0% |
| !! | TTGTTCTGAATTTTGGACAA+AGG | - | chr5_4:6555957-6555976 | None:intergenic | 30.0% |
| !! | GCTTCTTTTGTTCTGAATTT+TGG | - | chr5_4:6555964-6555983 | None:intergenic | 30.0% |
| AAGTTGAAAAGTGAAGTAAC+AGG | - | chr5_4:6556040-6556059 | None:intergenic | 30.0% | |
| TGATGCTATCAAGAGATAAA+TGG | + | chr5_4:6556092-6556111 | Msa0833430:CDS | 30.0% | |
| AAGAAGAACAAGAAGTTTGT+GGG | + | chr5_4:6556137-6556156 | Msa0833430:CDS | 30.0% | |
| TGATAAGAACCAAAAACCTT+AGG | - | chr5_4:6556307-6556326 | None:intergenic | 30.0% | |
| !! | TTTGGTTCTTATCAAGCATT+AGG | + | chr5_4:6556313-6556332 | Msa0833430:CDS | 30.0% |
| ATTCATCAATGGTAAAGCAT+TGG | + | chr5_4:6555613-6555632 | Msa0833430:CDS | 30.0% | |
| ! | TTCATCAATGGTAAAGCATT+GGG | + | chr5_4:6555614-6555633 | Msa0833430:CDS | 30.0% |
| AGAAGATGAAAATGAGAGTA+TGG | - | chr5_4:6555732-6555751 | None:intergenic | 30.0% | |
| TTTGTACTACTACTGTTTGT+TGG | - | chr5_4:6555772-6555791 | None:intergenic | 30.0% | |
| GTTGTTGAGAAAGAAAACTT+GGG | - | chr5_4:6555866-6555885 | None:intergenic | 30.0% | |
| TGTTGTTGAGAAAGAAAACT+TGG | - | chr5_4:6555867-6555886 | None:intergenic | 30.0% | |
| !!! | TGAGTTTTCGTTTTTGAGTT+GGG | - | chr5_4:6555934-6555953 | None:intergenic | 30.0% |
| !! | TTGTTCTGAATTTTGGACAA+AGG | - | chr5_4:6555957-6555976 | None:intergenic | 30.0% |
| !! | GCTTCTTTTGTTCTGAATTT+TGG | - | chr5_4:6555964-6555983 | None:intergenic | 30.0% |
| AAGTTGAAAAGTGAAGTAAC+AGG | - | chr5_4:6556040-6556059 | None:intergenic | 30.0% | |
| TGATGCTATCAAGAGATAAA+TGG | + | chr5_4:6556092-6556111 | Msa0833430:CDS | 30.0% | |
| AAGAAGAACAAGAAGTTTGT+GGG | + | chr5_4:6556137-6556156 | Msa0833430:CDS | 30.0% | |
| TGATAAGAACCAAAAACCTT+AGG | - | chr5_4:6556307-6556326 | None:intergenic | 30.0% | |
| !! | TTTGGTTCTTATCAAGCATT+AGG | + | chr5_4:6556313-6556332 | Msa0833430:CDS | 30.0% |
| TGCTCAAGAACATTCATCAA+TGG | + | chr5_4:6555602-6555621 | Msa0833430:CDS | 35.0% | |
| !!! | GTGAGTTTTCGTTTTTGAGT+TGG | - | chr5_4:6555935-6555954 | None:intergenic | 35.0% |
| AAAAGTGAAGTAACAGGTTC+TGG | - | chr5_4:6556034-6556053 | None:intergenic | 35.0% | |
| TTATAGCAGCTTCTTCTTCA+GGG | - | chr5_4:6556066-6556085 | None:intergenic | 35.0% | |
| ! | ATCTCTTGATAGCATCATGA+GGG | - | chr5_4:6556089-6556108 | None:intergenic | 35.0% |
| ! | TATCTCTTGATAGCATCATG+AGG | - | chr5_4:6556090-6556109 | None:intergenic | 35.0% |
| GAAGAAGAACAAGAAGTTTG+TGG | + | chr5_4:6556136-6556155 | Msa0833430:CDS | 35.0% | |
| ! | CTTTAGAAGTTCACAAGCAA+TGG | + | chr5_4:6556192-6556211 | Msa0833430:CDS | 35.0% |
| ! | GTGTTTTGTCCTAAGGTTTT+TGG | + | chr5_4:6556295-6556314 | Msa0833430:CDS | 35.0% |
| TTCTTCTTCTTCTTCCAAGA+TGG | - | chr5_4:6556364-6556383 | None:intergenic | 35.0% | |
| TGCTCAAGAACATTCATCAA+TGG | + | chr5_4:6555602-6555621 | Msa0833430:CDS | 35.0% | |
| !!! | GTGAGTTTTCGTTTTTGAGT+TGG | - | chr5_4:6555935-6555954 | None:intergenic | 35.0% |
| AAAAGTGAAGTAACAGGTTC+TGG | - | chr5_4:6556034-6556053 | None:intergenic | 35.0% | |
| TTATAGCAGCTTCTTCTTCA+GGG | - | chr5_4:6556066-6556085 | None:intergenic | 35.0% | |
| ! | ATCTCTTGATAGCATCATGA+GGG | - | chr5_4:6556089-6556108 | None:intergenic | 35.0% |
| ! | TATCTCTTGATAGCATCATG+AGG | - | chr5_4:6556090-6556109 | None:intergenic | 35.0% |
| GAAGAAGAACAAGAAGTTTG+TGG | + | chr5_4:6556136-6556155 | Msa0833430:CDS | 35.0% | |
| ! | CTTTAGAAGTTCACAAGCAA+TGG | + | chr5_4:6556192-6556211 | Msa0833430:CDS | 35.0% |
| ! | GTGTTTTGTCCTAAGGTTTT+TGG | + | chr5_4:6556295-6556314 | Msa0833430:CDS | 35.0% |
| TTCTTCTTCTTCTTCCAAGA+TGG | - | chr5_4:6556364-6556383 | None:intergenic | 35.0% | |
| !! | ATCAATGGTAAAGCATTGGG+TGG | + | chr5_4:6555617-6555636 | Msa0833430:CDS | 40.0% |
| TGAGATTGTGTTTGTGGTTG+GGG | - | chr5_4:6555689-6555708 | None:intergenic | 40.0% | |
| GTGAGATTGTGTTTGTGGTT+GGG | - | chr5_4:6555690-6555709 | None:intergenic | 40.0% | |
| ! | GAGAGTATGGTAGAAGAAGT+AGG | - | chr5_4:6555719-6555738 | None:intergenic | 40.0% |
| !! | TTGAGTTGGGTTCTTTGACT+TGG | - | chr5_4:6555921-6555940 | None:intergenic | 40.0% |
| ! | TCTGGTTCAGTTTCTGTTAG+TGG | - | chr5_4:6556016-6556035 | None:intergenic | 40.0% |
| TATAGCAGCTTCTTCTTCAG+GGG | - | chr5_4:6556065-6556084 | None:intergenic | 40.0% | |
| GTTATAGCAGCTTCTTCTTC+AGG | - | chr5_4:6556067-6556086 | None:intergenic | 40.0% | |
| CCTTAGGACAAAACACACAT+TGG | - | chr5_4:6556291-6556310 | None:intergenic | 40.0% | |
| ! | CCAATGTGTGTTTTGTCCTA+AGG | + | chr5_4:6556288-6556307 | Msa0833430:CDS | 40.0% |
| GGTTCTTATCAAGCATTAGG+TGG | + | chr5_4:6556316-6556335 | Msa0833430:CDS | 40.0% | |
| AATCTCACCTCTATCCATCT+TGG | + | chr5_4:6556347-6556366 | Msa0833430:CDS | 40.0% | |
| TCTTCTTCCAAGATGGATAG+AGG | - | chr5_4:6556357-6556376 | None:intergenic | 40.0% | |
| !! | ATCAATGGTAAAGCATTGGG+TGG | + | chr5_4:6555617-6555636 | Msa0833430:CDS | 40.0% |
| TGAGATTGTGTTTGTGGTTG+GGG | - | chr5_4:6555689-6555708 | None:intergenic | 40.0% | |
| GTGAGATTGTGTTTGTGGTT+GGG | - | chr5_4:6555690-6555709 | None:intergenic | 40.0% | |
| ! | GAGAGTATGGTAGAAGAAGT+AGG | - | chr5_4:6555719-6555738 | None:intergenic | 40.0% |
| !! | TTGAGTTGGGTTCTTTGACT+TGG | - | chr5_4:6555921-6555940 | None:intergenic | 40.0% |
| ! | TCTGGTTCAGTTTCTGTTAG+TGG | - | chr5_4:6556016-6556035 | None:intergenic | 40.0% |
| TATAGCAGCTTCTTCTTCAG+GGG | - | chr5_4:6556065-6556084 | None:intergenic | 40.0% | |
| GTTATAGCAGCTTCTTCTTC+AGG | - | chr5_4:6556067-6556086 | None:intergenic | 40.0% | |
| CCTTAGGACAAAACACACAT+TGG | - | chr5_4:6556291-6556310 | None:intergenic | 40.0% | |
| ! | CCAATGTGTGTTTTGTCCTA+AGG | + | chr5_4:6556288-6556307 | Msa0833430:CDS | 40.0% |
| GGTTCTTATCAAGCATTAGG+TGG | + | chr5_4:6556316-6556335 | Msa0833430:CDS | 40.0% | |
| AATCTCACCTCTATCCATCT+TGG | + | chr5_4:6556347-6556366 | Msa0833430:CDS | 40.0% | |
| TCTTCTTCCAAGATGGATAG+AGG | - | chr5_4:6556357-6556376 | None:intergenic | 40.0% | |
| GAGATTGTGTTTGTGGTTGG+GGG | - | chr5_4:6555688-6555707 | None:intergenic | 45.0% | |
| GGTGAGATTGTGTTTGTGGT+TGG | - | chr5_4:6555691-6555710 | None:intergenic | 45.0% | |
| GTGTGGTGAGATTGTGTTTG+TGG | - | chr5_4:6555695-6555714 | None:intergenic | 45.0% | |
| TGGTAGAAGAAGTAGGAGTG+TGG | - | chr5_4:6555712-6555731 | None:intergenic | 45.0% | |
| GAGATTGTGTTTGTGGTTGG+GGG | - | chr5_4:6555688-6555707 | None:intergenic | 45.0% | |
| GGTGAGATTGTGTTTGTGGT+TGG | - | chr5_4:6555691-6555710 | None:intergenic | 45.0% | |
| GTGTGGTGAGATTGTGTTTG+TGG | - | chr5_4:6555695-6555714 | None:intergenic | 45.0% | |
| TGGTAGAAGAAGTAGGAGTG+TGG | - | chr5_4:6555712-6555731 | None:intergenic | 45.0% | |
| ! | AGCATTGGGTGGACACATGA+AGG | + | chr5_4:6555628-6555647 | Msa0833430:CDS | 50.0% |
| GTTTGGAAGAGGAAGAGGGA+GGG | - | chr5_4:6555666-6555685 | None:intergenic | 50.0% | |
| TGTGTTTGTGGTTGGGGGTT+TGG | - | chr5_4:6555683-6555702 | None:intergenic | 50.0% | |
| ! | AGCATTGGGTGGACACATGA+AGG | + | chr5_4:6555628-6555647 | Msa0833430:CDS | 50.0% |
| GTTTGGAAGAGGAAGAGGGA+GGG | - | chr5_4:6555666-6555685 | None:intergenic | 50.0% | |
| TGTGTTTGTGGTTGGGGGTT+TGG | - | chr5_4:6555683-6555702 | None:intergenic | 50.0% | |
| GGTTTGGAAGAGGAAGAGGG+AGG | - | chr5_4:6555667-6555686 | None:intergenic | 55.0% | |
| GGGGGTTTGGAAGAGGAAGA+GGG | - | chr5_4:6555670-6555689 | None:intergenic | 55.0% | |
| TGGGGGTTTGGAAGAGGAAG+AGG | - | chr5_4:6555671-6555690 | None:intergenic | 55.0% | |
| TGTGGTTGGGGGTTTGGAAG+AGG | - | chr5_4:6555677-6555696 | None:intergenic | 55.0% | |
| GGTTTGGAAGAGGAAGAGGG+AGG | - | chr5_4:6555667-6555686 | None:intergenic | 55.0% | |
| GGGGGTTTGGAAGAGGAAGA+GGG | - | chr5_4:6555670-6555689 | None:intergenic | 55.0% | |
| TGGGGGTTTGGAAGAGGAAG+AGG | - | chr5_4:6555671-6555690 | None:intergenic | 55.0% | |
| TGTGGTTGGGGGTTTGGAAG+AGG | - | chr5_4:6555677-6555696 | None:intergenic | 55.0% | |
| TGGAAGAGGAAGAGGGAGGG+TGG | - | chr5_4:6555663-6555682 | None:intergenic | 60.0% | |
| TGGAAGAGGAAGAGGGAGGG+TGG | - | chr5_4:6555663-6555682 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 6555578 | 6556426 | 6555578 | ID=Msa0833430;Name=Msa0833430 |
| chr5_4 | mRNA | 6555578 | 6556426 | 6555578 | ID=Msa0833430-mRNA-1;Parent=Msa0833430;Name=Msa0833430-mRNA-1;_AED=0.00;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|282 |
| chr5_4 | exon | 6555578 | 6556426 | 6555578 | ID=Msa0833430-mRNA-1:exon:2834;Parent=Msa0833430-mRNA-1 |
| chr5_4 | CDS | 6555578 | 6556426 | 6555578 | ID=Msa0833430-mRNA-1:cds;Parent=Msa0833430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
