AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0837210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0837210 MtrunA17_Chr5g0403361 95.802 405 17 0 1 405 241 645 0.0 807
Msa0837210 MtrunA17_Chr5g0403371 94.937 237 12 0 405 641 185 421 2.32e-151 450
Msa0837210 MtrunA17_Chr8g0373711 48.364 275 119 7 382 641 151 417 2.45e-64 223
Msa0837210 MtrunA17_Chr5g0418011 47.368 133 61 3 510 640 5 130 5.06e-27 112
Msa0837210 MtrunA17_Chr5g0403381 42.969 128 70 2 514 641 335 459 1.08e-24 109
Msa0837210 MtrunA17_Chr1g0154511 32.215 298 147 15 382 641 166 446 1.15e-23 105
Msa0837210 MtrunA17_Chr3g0119351 33.036 224 122 9 438 640 266 482 1.17e-21 99.8
Msa0837210 MtrunA17_Chr8g0368871 28.251 223 154 4 170 391 5 222 6.54e-21 92.0
Msa0837210 MtrunA17_Chr5g0439334 39.865 148 86 2 495 640 315 461 8.72e-21 97.1
Msa0837210 MtrunA17_Chr8g0368891 28.767 219 150 4 170 387 446 659 1.03e-20 96.7
Msa0837210 MtrunA17_Chr3g0093791 23.913 230 171 1 147 376 312 537 5.93e-16 82.0
Msa0837210 MtrunA17_Chr7g0225871 36.719 128 69 5 524 640 44 170 1.13e-15 79.3
Msa0837210 MtrunA17_Chr6g0479541 25.063 395 227 10 10 368 228 589 1.56e-15 80.1
Msa0837210 MtrunA17_Chr6g0479541 26.214 206 144 3 170 373 290 489 2.68e-11 66.6
Msa0837210 MtrunA17_Chr6g0479541 24.762 210 146 4 168 373 253 454 7.29e-11 65.5
Msa0837210 MtrunA17_Chr5g0413071 38.462 130 68 4 520 641 293 418 3.45e-15 79.0
Msa0837210 MtrunA17_Chr6g0481431 25.446 224 162 3 168 391 3 221 1.83e-14 73.9
Msa0837210 MtrunA17_Chr6g0481751 27.344 128 93 0 249 376 227 354 3.53e-14 75.5
Msa0837210 MtrunA17_Chr6g0481751 24.766 214 153 3 170 381 257 464 8.64e-12 67.8
Msa0837210 MtrunA17_Chr1g0170071 29.609 179 120 4 197 374 570 743 3.64e-14 76.3
Msa0837210 MtrunA17_Chr3g0136851 27.488 211 145 2 165 373 400 604 3.93e-14 76.3
Msa0837210 MtrunA17_Chr3g0136851 25.806 217 155 2 170 385 230 441 4.14e-14 76.3
Msa0837210 MtrunA17_Chr3g0136851 24.138 232 165 3 145 373 101 324 1.01e-12 71.6
Msa0837210 MtrunA17_Chr3g0136851 26.316 209 139 4 171 376 832 1028 7.30e-12 68.9
Msa0837210 MtrunA17_Chr1g0182521 28.994 169 111 3 216 379 453 617 5.72e-14 75.5
Msa0837210 MtrunA17_Chr1g0182521 25.366 205 133 2 177 373 239 431 6.75e-14 75.1
Msa0837210 MtrunA17_Chr6g0471531 32.026 153 100 2 224 376 373 521 7.61e-14 74.7
Msa0837210 MtrunA17_Chr3g0079051 32.680 153 84 5 499 640 418 562 7.70e-14 75.1
Msa0837210 MtrunA17_Chr1g0210801 28.889 135 96 0 252 386 245 379 8.11e-14 74.7
Msa0837210 MtrunA17_Chr1g0210801 24.457 184 135 2 185 368 217 396 2.65e-13 72.8
Msa0837210 MtrunA17_Chr7g0231941 22.174 230 141 5 145 373 88 280 1.03e-13 74.7
Msa0837210 MtrunA17_Chr6g0471201 24.074 216 157 2 164 376 297 508 1.05e-13 74.3
Msa0837210 MtrunA17_Chr6g0483431 26.627 169 120 1 205 373 236 400 1.10e-13 73.6
Msa0837210 MtrunA17_Chr6g0478551 29.000 200 138 2 174 373 301 496 1.24e-13 73.9
Msa0837210 MtrunA17_Chr6g0478551 27.273 143 104 0 249 391 232 374 2.47e-11 66.6
Msa0837210 MtrunA17_Chr6g0478551 31.148 122 84 0 252 373 270 391 5.40e-11 65.5
Msa0837210 MtrunA17_Chr7g0218641 29.282 181 123 3 211 391 340 515 1.61e-13 73.6
Msa0837210 MtrunA17_Chr6g0481621 27.711 166 117 1 220 382 368 533 1.87e-13 73.6
Msa0837210 MtrunA17_Chr6g0481621 27.407 135 98 0 252 386 263 397 1.34e-12 70.9
Msa0837210 MtrunA17_Chr6g0481621 25.503 149 105 1 252 400 298 440 6.47e-11 65.5
Msa0837210 MtrunA17_Chr6g0471481 25.503 149 105 1 252 400 96 238 2.52e-13 71.2
Msa0837210 MtrunA17_Chr6g0473341 27.869 122 88 0 252 373 270 391 2.71e-13 72.8
Msa0837210 MtrunA17_Chr2g0284291 24.068 295 201 8 82 373 134 408 2.78e-13 73.2
Msa0837210 MtrunA17_Chr8g0375231 32.456 114 77 0 253 366 223 336 2.96e-13 73.2
Msa0837210 MtrunA17_Chr8g0393001 21.028 214 166 1 133 346 58 268 3.00e-13 72.8
Msa0837210 MtrunA17_Chr2g0318171 35.227 176 87 8 476 640 432 591 3.31e-13 73.2
Msa0837210 MtrunA17_Chr3g0133151 23.625 309 189 7 111 376 24 328 3.51e-13 72.4
Msa0837210 MtrunA17_Chr3g0119241 36.429 140 71 6 510 641 298 427 3.53e-13 72.8
Msa0837210 MtrunA17_Chr6g0473241 27.869 122 88 0 252 373 270 391 3.75e-13 72.4
Msa0837210 MtrunA17_Chr2g0331911 23.793 290 189 2 127 384 77 366 3.84e-13 72.8
Msa0837210 MtrunA17_Chr2g0296811 26.289 194 104 4 215 373 15 204 4.39e-13 68.9
Msa0837210 MtrunA17_Chr6g0481981 22.083 240 156 2 174 382 176 415 4.66e-13 72.0
Msa0837210 MtrunA17_Chr3g0143411 21.759 216 164 1 161 376 129 339 4.72e-13 72.0
Msa0837210 MtrunA17_Chr7g0276351 25.847 236 159 4 145 373 45 271 4.90e-13 71.6
Msa0837210 MtrunA17_Chr1g0171281 28.676 136 97 0 252 387 236 371 5.28e-13 72.0
Msa0837210 MtrunA17_Chr1g0176791 30.000 130 90 1 245 373 864 993 5.34e-13 72.4
Msa0837210 MtrunA17_Chr1g0176791 23.013 239 179 3 150 387 176 410 7.03e-13 72.0
Msa0837210 MtrunA17_Chr1g0176791 23.096 394 263 9 3 373 512 888 8.29e-11 65.5
Msa0837210 MtrunA17_Chr6g0482611 22.535 284 199 4 107 373 88 367 5.72e-13 72.0
Msa0837210 MtrunA17_Chr6g0482611 25.000 200 139 3 211 407 349 540 3.47e-12 69.3
Msa0837210 MtrunA17_Chr3g0091741 28.962 183 114 4 223 399 101 273 5.84e-13 72.0
Msa0837210 MtrunA17_Chr6g0482541 22.490 249 161 3 174 391 111 358 6.97e-13 70.9
Msa0837210 MtrunA17_Chr6g0482541 26.866 134 96 1 252 383 80 213 1.52e-11 66.6
Msa0837210 MtrunA17_Chr8g0392911 27.700 213 119 5 188 369 317 525 7.44e-13 71.6
Msa0837210 MtrunA17_Chr8g0391651 22.897 214 155 2 168 378 480 686 7.57e-13 72.0
Msa0837210 MtrunA17_Chr8g0391651 23.445 209 156 1 170 378 307 511 8.19e-12 68.6
Msa0837210 MtrunA17_Chr5g0412071 27.160 162 110 3 249 408 435 590 7.95e-13 72.0
Msa0837210 MtrunA17_Chr5g0412071 29.008 131 93 0 252 382 368 498 2.52e-11 67.0
Msa0837210 MtrunA17_Chr5g0412071 21.339 239 161 4 155 373 83 314 8.98e-11 65.5
Msa0837210 MtrunA17_Chr8g0371311 30.049 203 108 9 456 640 3 189 8.68e-13 70.9
Msa0837210 MtrunA17_Chr6g0478271 29.008 131 93 0 252 382 33 163 9.40e-13 67.8
Msa0837210 MtrunA17_Chr6g0482991 26.667 165 86 1 249 378 21 185 9.67e-13 67.4
Msa0837210 MtrunA17_Chr2g0282801 29.600 125 88 0 252 376 194 318 9.86e-13 70.9
Msa0837210 MtrunA17_Chr5g0396041 25.389 193 140 2 170 362 436 624 1.26e-12 71.6
Msa0837210 MtrunA17_Chr5g0396041 22.727 198 149 1 170 367 401 594 2.74e-12 70.5
Msa0837210 MtrunA17_Chr5g0396041 29.600 125 88 0 252 376 374 498 1.30e-11 68.2
Msa0837210 MtrunA17_Chr2g0297211 29.747 158 99 2 221 373 363 513 1.26e-12 71.2
Msa0837210 MtrunA17_Chr5g0434451 23.887 247 177 3 144 387 196 434 1.60e-12 70.5
Msa0837210 MtrunA17_Chr4g0042361 36.923 130 64 6 523 640 527 650 1.60e-12 70.9
Msa0837210 MtrunA17_Chr6g0472611 30.952 168 111 3 224 391 357 519 1.66e-12 70.5
Msa0837210 MtrunA17_Chr6g0482571 23.585 212 117 3 205 378 195 399 1.67e-12 69.7
Msa0837210 MtrunA17_Chr6g0482571 29.508 122 86 0 252 373 98 219 2.21e-11 66.2
Msa0837210 MtrunA17_Chr2g0312651 34.483 174 90 7 485 640 754 921 1.71e-12 70.9
Msa0837210 MtrunA17_Chr6g0478291 29.771 131 92 0 252 382 382 512 1.73e-12 70.5
Msa0837210 MtrunA17_Chr1g0160881 26.957 230 159 2 170 399 307 527 1.89e-12 70.5
Msa0837210 MtrunA17_Chr4g0009441 21.495 214 163 2 161 373 84 293 1.89e-12 70.1
Msa0837210 MtrunA17_Chr4g0019851 26.531 147 104 1 252 394 302 448 2.00e-12 70.1
Msa0837210 MtrunA17_Chr4g0060531 38.060 134 55 5 529 640 75 202 2.34e-12 69.3
Msa0837210 MtrunA17_Chr2g0280711 29.412 221 117 8 449 640 431 641 2.42e-12 70.5
Msa0837210 MtrunA17_Chr3g0102971 26.203 187 134 1 196 382 76 258 2.46e-12 68.2
Msa0837210 MtrunA17_Chr6g0482561 26.984 189 127 3 205 390 177 357 2.57e-12 68.9
Msa0837210 MtrunA17_Chr5g0423061 28.444 225 128 10 437 640 213 425 2.61e-12 70.1
Msa0837210 MtrunA17_Chr6g0482921 26.404 178 127 1 205 382 75 248 2.84e-12 67.8
Msa0837210 MtrunA17_Chr7g0238461 26.087 184 131 2 196 378 141 320 2.85e-12 69.7
Msa0837210 MtrunA17_Chr6g0471871 29.762 168 113 2 224 391 362 524 3.02e-12 69.7
Msa0837210 MtrunA17_Chr6g0471871 29.508 122 86 0 252 373 281 402 7.98e-11 65.1
Msa0837210 MtrunA17_Chr8g0359551 29.114 158 108 2 216 373 358 511 3.20e-12 69.7
Msa0837210 MtrunA17_Chr8g0359551 27.737 137 94 1 251 382 354 490 9.49e-11 65.1
Msa0837210 MtrunA17_Chr6g0481991 24.638 207 148 2 174 378 302 502 3.34e-12 69.7
Msa0837210 MtrunA17_Chr4g0048631 32.547 212 104 10 460 640 440 643 3.44e-12 69.7
Msa0837210 MtrunA17_Chr5g0399561 29.353 201 106 6 453 640 445 622 3.49e-12 69.7
Msa0837210 MtrunA17_Chr2g0297991 28.485 165 114 2 212 376 415 575 4.01e-12 69.7
Msa0837210 MtrunA17_Chr4g0060641 23.000 200 150 2 174 373 110 305 4.02e-12 69.7
Msa0837210 MtrunA17_Chr4g0048611 30.075 133 90 1 252 384 331 460 4.27e-12 69.7
Msa0837210 MtrunA17_Chr4g0059641 28.244 131 94 0 252 382 153 283 4.86e-12 67.8
Msa0837210 MtrunA17_Chr6g0473381 26.108 203 142 4 189 391 145 339 5.34e-12 68.2
Msa0837210 MtrunA17_Chr6g0460961 23.843 281 152 11 403 642 340 599 5.93e-12 68.9
Msa0837210 MtrunA17_Chr5g0410901 20.580 379 250 8 10 378 318 655 6.47e-12 68.9
Msa0837210 MtrunA17_Chr2g0288121 35.185 162 81 7 497 641 1 155 7.13e-12 67.4
Msa0837210 MtrunA17_Chr1g0194541 30.702 228 126 12 432 640 190 404 7.26e-12 68.6
Msa0837210 MtrunA17_Chr6g0482901 31.200 125 86 0 252 376 386 510 7.71e-12 68.2
Msa0837210 MtrunA17_Chr6g0478251 28.846 104 74 0 249 352 34 137 9.49e-12 63.2
Msa0837210 MtrunA17_Chr2g0333691 30.693 202 104 9 465 641 43 233 9.55e-12 67.4
Msa0837210 MtrunA17_Chr4g0033981 25.121 207 151 2 170 376 352 554 1.08e-11 68.2
Msa0837210 MtrunA17_Chr6g0476151 24.878 205 150 2 174 378 269 469 1.08e-11 67.8
Msa0837210 MtrunA17_Chr6g0482821 21.667 240 157 2 174 382 275 514 1.09e-11 67.8
Msa0837210 MtrunA17_Chr6g0482821 27.869 122 88 0 252 373 244 365 3.52e-11 66.2
Msa0837210 MtrunA17_Chr2g0296401 22.000 300 204 5 116 393 62 353 1.13e-11 68.2
Msa0837210 MtrunA17_Chr5g0446031 24.020 204 151 2 170 373 442 641 1.14e-11 68.2
Msa0837210 MtrunA17_Chr5g0446031 20.866 254 195 3 126 378 84 332 1.91e-11 67.4
Msa0837210 MtrunA17_Chr3g0079211 29.032 124 87 1 252 374 318 441 1.24e-11 67.4
Msa0837210 MtrunA17_Chr8g0376131 35.385 130 67 5 523 640 39 163 1.34e-11 67.0
Msa0837210 MtrunA17_Chr6g0482601 22.177 248 161 3 174 390 184 430 1.41e-11 67.0
Msa0837210 MtrunA17_Chr6g0482601 27.826 115 83 0 252 366 153 267 3.80e-11 65.9
Msa0837210 MtrunA17_Chr1g0168761 22.541 244 158 2 174 386 258 501 1.44e-11 67.4
Msa0837210 MtrunA17_Chr6g0482581 28.571 105 75 0 249 353 34 138 1.44e-11 62.8
Msa0837210 MtrunA17_Chr1g0162281 24.651 215 157 3 162 376 182 391 1.51e-11 67.8
Msa0837210 MtrunA17_Chr8g0369641 23.333 210 155 2 168 376 554 758 1.58e-11 67.8
Msa0837210 MtrunA17_Chr8g0389011 33.594 128 68 5 524 640 486 607 1.61e-11 67.8
Msa0837210 MtrunA17_Chr7g0217921 22.182 275 181 8 127 376 51 317 1.63e-11 67.4
Msa0837210 MtrunA17_Chr8g0389031 33.594 128 68 5 524 640 250 371 1.70e-11 67.4
Msa0837210 MtrunA17_Chr6g0481601 28.369 141 97 2 205 345 360 496 1.76e-11 67.0
Msa0837210 MtrunA17_Chr6g0481601 28.319 113 80 1 241 353 218 329 2.09e-11 66.6
Msa0837210 MtrunA17_Chr6g0481601 28.571 126 84 1 275 400 321 440 6.63e-11 65.1
Msa0837210 MtrunA17_Chr6g0482971 27.749 191 128 4 221 409 343 525 1.91e-11 67.0
Msa0837210 MtrunA17_Chr6g0471491 29.508 122 86 0 264 385 73 194 2.20e-11 64.3
Msa0837210 MtrunA17_Chr6g0488761 34.375 128 65 5 524 640 474 593 2.26e-11 67.0
Msa0837210 MtrunA17_Chr5g0415451 30.939 181 105 7 476 641 369 544 2.34e-11 67.0
Msa0837210 MtrunA17_Chr6g0449581 24.413 213 150 5 163 369 247 454 2.38e-11 67.0
Msa0837210 MtrunA17_Chr2g0314611 34.356 163 83 8 489 640 446 595 2.46e-11 67.0
Msa0837210 MtrunA17_Chr6g0473261 23.153 203 152 1 174 376 314 512 2.50e-11 66.6
Msa0837210 MtrunA17_Chr6g0473331 28.689 122 87 0 252 373 308 429 2.67e-11 66.6
Msa0837210 MtrunA17_Chr6g0478241 30.928 97 67 0 271 367 12 108 2.94e-11 61.2
Msa0837210 MtrunA17_Chr6g0464141 33.168 202 104 11 457 641 649 836 3.26e-11 66.6
Msa0837210 MtrunA17_Chr3g0082941 29.126 206 114 7 454 640 92 284 3.31e-11 66.2
Msa0837210 MtrunA17_Chr5g0442231 21.481 270 193 3 109 378 44 294 3.50e-11 66.6
Msa0837210 MtrunA17_Chr6g0478261 28.931 159 109 2 224 382 355 509 4.01e-11 65.9
Msa0837210 MtrunA17_Chr6g0478261 29.508 122 86 0 252 373 414 535 7.24e-11 65.1
Msa0837210 MtrunA17_Chr3g0139121 32.500 160 86 7 495 640 439 590 4.26e-11 66.2
Msa0837210 MtrunA17_Chr4g0034931 37.984 129 63 6 524 640 128 251 4.39e-11 65.5
Msa0837210 MtrunA17_Chr2g0312191 27.778 126 91 0 251 376 379 504 4.57e-11 65.9
Msa0837210 MtrunA17_Chr3g0084661 32.593 135 74 5 518 640 15 144 4.62e-11 64.7
Msa0837210 MtrunA17_Chr6g0473251 21.293 263 144 4 174 373 266 528 4.67e-11 65.9
Msa0837210 MtrunA17_Chr6g0478691 25.610 164 85 1 252 378 456 619 5.30e-11 65.9
Msa0837210 MtrunA17_Chr1g0150761 35.156 128 64 6 524 640 414 533 5.31e-11 65.9
Msa0837210 MtrunA17_Chr6g0473501 27.049 122 89 0 252 373 165 286 5.42e-11 65.1
Msa0837210 MtrunA17_Chr1g0168811 23.645 203 145 2 174 373 356 551 6.02e-11 65.5
Msa0837210 MtrunA17_Chr6g0473461 23.529 204 117 3 205 373 2 201 6.10e-11 62.4
Msa0837210 MtrunA17_Chr6g0478001 28.571 119 85 0 249 367 420 538 6.22e-11 65.5
Msa0837210 MtrunA17_Chr6g0473471 27.049 122 89 0 252 373 165 286 6.28e-11 65.1
Msa0837210 MtrunA17_Chr6g0453571 29.016 193 101 9 437 612 255 428 6.34e-11 65.1
Msa0837210 MtrunA17_Chr4g0060341 22.936 218 158 2 168 382 301 511 6.75e-11 65.5
Msa0837210 MtrunA17_Chr6g0482751 29.771 131 92 0 252 382 380 510 6.82e-11 65.1
Msa0837210 MtrunA17_Chr1g0149711 34.959 123 62 5 531 641 84 200 6.99e-11 64.7
Msa0837210 MtrunA17_Chr8g0369231 29.146 199 116 7 459 640 195 385 7.01e-11 65.5
Msa0837210 MtrunA17_Chr6g0477511 26.174 149 106 2 228 376 232 376 7.04e-11 65.1
Msa0837210 MtrunA17_Chr6g0473441 26.230 122 90 0 252 373 270 391 7.18e-11 65.1
Msa0837210 MtrunA17_Chr7g0214351 23.853 218 161 3 170 386 306 519 7.49e-11 65.5
Msa0837210 MtrunA17_Chr7g0233421 24.378 201 143 4 177 376 220 412 7.65e-11 65.5
Msa0837210 MtrunA17_Chr4g0058401 23.629 237 172 5 130 362 217 448 7.71e-11 65.1
Msa0837210 MtrunA17_Chr6g0458411 23.636 220 163 2 154 373 284 498 7.76e-11 65.1
Msa0837210 MtrunA17_Chr8g0353181 22.093 258 173 5 155 395 58 304 7.83e-11 65.1
Msa0837210 MtrunA17_Chr6g0473491 26.230 122 90 0 252 373 270 391 7.98e-11 65.1
Msa0837210 MtrunA17_Chr7g0241921 26.006 323 180 14 336 641 526 806 8.17e-11 65.5
Msa0837210 MtrunA17_Chr6g0482651 29.752 121 85 0 249 369 264 384 8.22e-11 65.1
Msa0837210 MtrunA17_Chr3g0123141 29.200 250 142 12 417 641 480 719 8.30e-11 65.5
Msa0837210 MtrunA17_Chr4g0042341 35.385 130 66 6 523 640 511 634 8.51e-11 65.5
Msa0837210 MtrunA17_Chr1g0205771 26.087 207 127 8 446 640 262 454 8.71e-11 65.1
Msa0837210 MtrunA17_Chr8g0381361 28.000 125 90 0 252 376 362 486 8.87e-11 64.7
Msa0837210 MtrunA17_Chr4g0050481 25.641 234 163 6 141 368 68 296 9.31e-11 64.7
Msa0837210 MtrunA17_Chr2g0333091 31.034 174 98 8 479 640 439 602 9.98e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0837210 AT5G66631.1 56.763 414 163 4 1 405 241 647 2.62e-166 491
Msa0837210 AT5G66631.1 22.727 220 161 2 169 388 99 309 4.56e-11 66.6
Msa0837210 AT2G33580.1 41.085 129 68 3 513 640 349 470 5.24e-20 95.1
Msa0837210 AT3G18110.1 27.027 222 159 1 170 391 362 580 3.81e-18 89.7
Msa0837210 AT3G18110.1 27.684 177 123 3 201 376 288 460 8.22e-13 72.4
Msa0837210 AT1G18900.4 23.950 238 177 1 147 384 336 569 6.73e-18 88.6
Msa0837210 AT1G18900.2 23.950 238 177 1 147 384 336 569 6.73e-18 88.6
Msa0837210 AT1G18900.1 23.950 238 177 1 147 384 336 569 6.73e-18 88.6
Msa0837210 AT1G18900.3 23.950 238 177 1 147 384 336 569 7.49e-18 88.6
Msa0837210 AT2G23770.1 29.091 275 137 10 408 640 194 452 1.93e-17 86.7
Msa0837210 AT1G74750.2 22.414 290 203 2 115 386 281 566 4.79e-17 85.9
Msa0837210 AT1G74750.1 22.414 290 203 2 115 386 281 566 4.79e-17 85.9
Msa0837210 AT1G74750.4 22.414 290 203 2 115 386 281 566 4.79e-17 85.9
Msa0837210 AT1G74750.3 22.414 290 203 2 115 386 281 566 4.79e-17 85.9
Msa0837210 AT5G65560.1 24.151 265 171 6 110 373 72 307 4.04e-16 82.8
Msa0837210 AT5G65560.2 24.151 265 171 6 110 373 72 307 4.04e-16 82.8
Msa0837210 AT5G65560.3 24.151 265 171 6 110 373 72 307 4.04e-16 82.8
Msa0837210 AT5G18390.1 24.370 238 176 2 132 368 67 301 4.87e-16 81.6
Msa0837210 AT5G06400.1 26.316 247 173 5 133 376 146 386 6.56e-16 82.4
Msa0837210 AT2G31400.2 24.490 196 144 1 173 368 372 563 2.21e-15 80.5
Msa0837210 AT2G31400.1 24.490 196 144 1 173 368 372 563 2.87e-15 80.1
Msa0837210 AT3G22670.1 21.404 285 190 3 128 378 118 402 2.98e-15 79.7
Msa0837210 AT5G39710.1 27.717 184 129 2 170 353 270 449 5.12e-15 79.3
Msa0837210 AT5G39710.1 22.596 208 153 2 168 373 338 539 1.39e-11 68.2
Msa0837210 AT5G39710.1 31.148 122 84 0 252 373 453 574 7.29e-11 65.9
Msa0837210 AT5G11020.1 30.472 233 127 10 433 641 31 252 1.39e-14 77.0
Msa0837210 AT1G12620.1 27.638 199 136 4 170 366 207 399 2.57e-14 76.6
Msa0837210 AT3G09060.2 22.177 248 190 1 141 388 9 253 2.83e-14 76.6
Msa0837210 AT3G09060.1 22.177 248 190 1 141 388 9 253 2.83e-14 76.6
Msa0837210 AT4G31850.1 24.942 433 279 12 3 413 219 627 3.46e-14 77.0
Msa0837210 AT1G12775.1 27.723 202 138 4 170 369 223 418 3.79e-14 76.3
Msa0837210 AT3G22470.2 29.000 200 138 2 170 369 205 400 3.82e-14 76.3
Msa0837210 AT3G22470.1 29.000 200 138 2 170 369 205 400 4.23e-14 76.3
Msa0837210 AT3G22470.1 29.508 122 86 0 252 373 318 439 9.15e-13 72.0
Msa0837210 AT3G62470.1 23.013 239 175 5 131 367 150 381 4.28e-14 75.9
Msa0837210 AT5G14820.1 23.013 239 175 5 131 367 149 380 4.50e-14 75.9
Msa0837210 AT2G32630.1 24.034 233 166 3 153 382 203 427 6.64e-14 75.5
Msa0837210 AT3G62540.1 23.013 239 175 5 131 367 150 381 9.04e-14 75.1
Msa0837210 AT5G61990.1 33.636 110 73 0 252 361 630 739 9.84e-14 75.5
Msa0837210 AT5G61990.1 24.311 399 254 14 8 376 593 973 1.65e-13 74.7
Msa0837210 AT1G62930.1 28.571 210 134 4 170 373 215 414 1.28e-13 74.7
Msa0837210 AT1G62930.1 27.481 131 95 0 252 382 433 563 8.07e-13 72.0
Msa0837210 AT4G01400.1 24.893 233 164 2 145 373 54 279 1.68e-13 73.6
Msa0837210 AT4G01400.1 21.757 239 173 5 133 368 117 344 7.15e-11 65.5
Msa0837210 AT3G16010.1 27.200 250 174 4 127 373 78 322 2.22e-13 73.9
Msa0837210 AT3G16010.1 25.157 159 115 1 216 374 450 604 3.06e-11 67.0
Msa0837210 AT2G01390.1 20.755 212 164 1 140 351 87 294 3.13e-13 73.2
Msa0837210 AT1G62590.2 28.000 200 140 2 170 369 220 415 3.63e-13 73.2
Msa0837210 AT1G62590.1 28.000 200 140 2 170 369 220 415 3.63e-13 73.2
Msa0837210 AT1G69730.1 34.021 194 102 9 465 640 373 558 4.32e-13 73.2
Msa0837210 AT5G38730.1 23.529 255 167 7 141 373 44 292 4.34e-13 72.8
Msa0837210 AT5G02860.1 21.825 252 154 4 170 385 203 447 4.55e-13 73.2
Msa0837210 AT5G02860.1 21.121 232 176 3 148 376 249 476 1.80e-11 67.8
Msa0837210 AT5G02860.4 21.825 252 154 4 170 385 203 447 4.55e-13 73.2
Msa0837210 AT5G02860.4 21.121 232 176 3 148 376 249 476 1.80e-11 67.8
Msa0837210 AT5G02860.2 21.825 252 154 4 170 385 203 447 4.55e-13 73.2
Msa0837210 AT5G02860.2 21.121 232 176 3 148 376 249 476 1.80e-11 67.8
Msa0837210 AT5G02860.5 21.825 252 154 4 170 385 203 447 4.55e-13 73.2
Msa0837210 AT5G02860.5 21.121 232 176 3 148 376 249 476 1.80e-11 67.8
Msa0837210 AT5G02860.3 21.825 252 154 4 170 385 203 447 4.55e-13 73.2
Msa0837210 AT5G02860.3 21.121 232 176 3 148 376 249 476 1.80e-11 67.8
Msa0837210 AT1G06710.15 23.278 421 282 11 10 400 305 714 5.48e-13 72.8
Msa0837210 AT1G06710.18 23.278 421 282 11 10 400 305 714 5.48e-13 72.8
Msa0837210 AT1G06710.17 23.278 421 282 11 10 400 305 714 5.48e-13 72.8
Msa0837210 AT1G06710.14 23.278 421 282 11 10 400 305 714 5.48e-13 72.8
Msa0837210 AT1G06710.16 23.278 421 282 11 10 400 305 714 5.48e-13 72.8
Msa0837210 AT1G06710.10 23.278 421 282 11 10 400 305 714 5.48e-13 72.8
Msa0837210 AT1G06710.11 23.278 421 282 11 10 400 305 714 5.48e-13 72.8
Msa0837210 AT2G17140.1 24.303 251 176 5 144 386 5 249 6.15e-13 72.8
Msa0837210 AT2G17140.1 21.958 378 251 9 4 373 109 450 4.08e-12 70.1
Msa0837210 AT2G17140.2 24.303 251 176 5 144 386 5 249 6.15e-13 72.8
Msa0837210 AT2G17140.2 21.958 378 251 9 4 373 109 450 4.08e-12 70.1
Msa0837210 AT3G16890.2 23.849 239 176 4 139 376 296 529 6.30e-13 72.0
Msa0837210 AT3G16890.2 23.041 217 163 2 170 386 291 503 3.15e-11 66.6
Msa0837210 AT1G30290.1 26.147 218 148 5 181 395 353 560 6.54e-13 72.4
Msa0837210 AT1G06710.7 23.278 421 282 11 10 400 305 714 6.59e-13 72.8
Msa0837210 AT1G06710.1 23.278 421 282 11 10 400 305 714 6.59e-13 72.8
Msa0837210 AT1G06710.9 23.278 421 282 11 10 400 305 714 6.59e-13 72.8
Msa0837210 AT1G06710.4 23.278 421 282 11 10 400 305 714 6.59e-13 72.8
Msa0837210 AT1G06710.13 23.278 421 282 11 10 400 305 714 6.59e-13 72.8
Msa0837210 AT1G06710.3 23.278 421 282 11 10 400 305 714 6.59e-13 72.8
Msa0837210 AT1G06710.8 23.278 421 282 11 10 400 305 714 6.59e-13 72.8
Msa0837210 AT1G06710.2 23.278 421 282 11 10 400 305 714 6.59e-13 72.8
Msa0837210 AT1G06710.19 23.278 421 282 11 10 400 305 714 6.59e-13 72.8
Msa0837210 AT1G06710.5 23.278 421 282 11 10 400 305 714 6.59e-13 72.8
Msa0837210 AT1G06710.6 23.278 421 282 11 10 400 305 714 6.59e-13 72.8
Msa0837210 AT1G06710.12 23.278 421 282 11 10 400 305 714 6.59e-13 72.8
Msa0837210 AT1G30290.2 26.147 218 148 5 181 395 353 560 6.79e-13 72.4
Msa0837210 AT3G16890.1 23.849 239 176 4 139 376 425 658 6.87e-13 72.4
Msa0837210 AT3G16890.1 23.041 217 163 2 170 386 420 632 2.18e-11 67.4
Msa0837210 AT1G74850.1 27.907 215 146 4 174 385 210 418 7.78e-13 72.4
Msa0837210 AT1G12700.1 28.462 130 93 0 249 378 333 462 8.55e-13 72.0
Msa0837210 AT1G12700.1 25.806 217 149 4 170 382 328 536 9.78e-12 68.6
Msa0837210 AT1G12700.3 28.462 130 93 0 249 378 349 478 8.60e-13 72.0
Msa0837210 AT1G12700.3 25.806 217 149 4 170 382 344 552 1.07e-11 68.6
Msa0837210 AT1G12700.2 28.462 130 93 0 249 378 349 478 8.60e-13 72.0
Msa0837210 AT1G12700.2 25.806 217 149 4 170 382 344 552 1.07e-11 68.6
Msa0837210 AT2G06000.1 25.243 206 145 3 173 376 101 299 1.00e-12 71.6
Msa0837210 AT2G06000.1 27.869 122 88 0 252 373 280 401 1.73e-11 67.4
Msa0837210 AT2G06000.2 25.243 206 145 3 173 376 101 299 1.00e-12 71.6
Msa0837210 AT2G06000.2 27.869 122 88 0 252 373 280 401 1.73e-11 67.4
Msa0837210 AT5G16420.1 23.297 279 163 5 140 373 43 315 1.14e-12 71.2
Msa0837210 AT5G16420.3 23.297 279 163 5 140 373 43 315 1.14e-12 71.2
Msa0837210 AT5G16420.4 23.297 279 163 5 140 373 43 315 1.14e-12 71.2
Msa0837210 AT5G16420.2 23.297 279 163 5 140 373 43 315 1.14e-12 71.2
Msa0837210 AT1G55630.1 21.759 216 162 2 164 376 243 454 1.15e-12 71.2
Msa0837210 AT5G61400.1 24.051 395 227 13 13 369 170 529 1.18e-12 71.6
Msa0837210 AT1G62670.2 28.986 207 143 2 170 376 216 418 1.18e-12 71.6
Msa0837210 AT1G62670.2 25.954 131 97 0 252 382 434 564 3.23e-12 70.1
Msa0837210 AT1G62670.1 28.986 207 143 2 170 376 216 418 1.18e-12 71.6
Msa0837210 AT1G62670.1 25.954 131 97 0 252 382 434 564 3.23e-12 70.1
Msa0837210 AT1G63130.1 27.755 245 152 7 138 373 187 415 1.21e-12 71.6
Msa0837210 AT1G63130.1 24.277 173 123 2 212 382 398 564 3.84e-12 69.7
Msa0837210 AT1G63130.2 27.755 245 152 7 138 373 187 415 1.21e-12 71.6
Msa0837210 AT1G63130.2 24.277 173 123 2 212 382 398 564 3.84e-12 69.7
Msa0837210 AT3G53700.1 23.611 216 161 1 176 391 436 647 1.37e-12 71.6
Msa0837210 AT3G53700.1 27.869 122 88 0 252 373 333 454 8.93e-11 65.5
Msa0837210 AT1G77340.1 23.318 223 155 4 155 376 40 247 1.39e-12 70.5
Msa0837210 AT3G25210.1 22.358 246 161 3 149 376 82 315 2.14e-12 69.7
Msa0837210 AT1G62910.1 28.571 210 134 4 170 373 218 417 2.57e-12 70.5
Msa0837210 AT1G79490.1 28.824 170 113 2 212 379 315 478 3.04e-12 70.5
Msa0837210 AT1G05670.1 24.155 207 153 2 170 376 486 688 3.37e-12 70.1
Msa0837210 AT1G05670.1 31.092 119 82 0 250 368 352 470 1.80e-11 67.8
Msa0837210 AT1G05670.1 28.346 127 91 0 251 377 318 444 4.72e-11 66.6
Msa0837210 AT1G05670.2 24.155 207 153 2 170 376 486 688 3.37e-12 70.1
Msa0837210 AT1G05670.2 31.092 119 82 0 250 368 352 470 1.80e-11 67.8
Msa0837210 AT1G05670.2 28.346 127 91 0 251 377 318 444 4.72e-11 66.6
Msa0837210 AT1G05670.3 24.155 207 153 2 170 376 486 688 3.37e-12 70.1
Msa0837210 AT1G05670.3 31.092 119 82 0 250 368 352 470 1.80e-11 67.8
Msa0837210 AT1G05670.3 28.346 127 91 0 251 377 318 444 4.72e-11 66.6
Msa0837210 AT5G11020.3 32.487 197 97 10 471 641 5 191 3.42e-12 68.9
Msa0837210 AT1G71060.1 22.093 258 187 4 162 412 115 365 3.64e-12 69.7
Msa0837210 AT4G20140.1 37.795 127 65 4 529 641 944 1070 3.82e-12 70.5
Msa0837210 AT1G63330.3 28.000 200 140 2 170 369 145 340 5.08e-12 69.3
Msa0837210 AT1G63330.1 28.000 200 140 2 170 369 145 340 5.08e-12 69.3
Msa0837210 AT1G63330.2 28.000 200 140 2 170 369 145 340 5.08e-12 69.3
Msa0837210 AT1G09820.1 23.938 259 161 5 144 368 194 450 5.18e-12 69.3
Msa0837210 AT1G09820.1 28.030 132 94 1 251 382 403 533 1.26e-11 68.2
Msa0837210 AT3G53380.1 29.319 191 104 6 463 640 313 485 6.04e-12 69.3
Msa0837210 AT1G09900.1 28.814 118 84 0 252 369 207 324 6.47e-12 68.9
Msa0837210 AT1G09900.1 27.200 125 88 1 249 373 172 293 3.33e-11 66.6
Msa0837210 AT1G09680.1 21.212 231 177 3 157 387 223 448 6.78e-12 68.9
Msa0837210 AT1G02060.1 24.464 233 138 6 145 376 71 266 7.21e-12 68.9
Msa0837210 AT2G07020.1 37.037 135 64 7 524 647 407 531 8.56e-12 68.9
Msa0837210 AT1G61390.2 28.788 198 114 8 460 640 275 462 9.32e-12 68.6
Msa0837210 AT1G63400.1 25.000 168 116 4 212 376 402 562 9.35e-12 68.6
Msa0837210 AT1G18390.2 28.889 225 118 9 448 641 244 457 1.03e-11 68.6
Msa0837210 AT5G42440.1 27.778 198 113 9 464 640 4 192 1.35e-11 67.0
Msa0837210 AT1G61390.1 28.788 198 114 8 460 640 443 630 1.40e-11 68.2
Msa0837210 AT5G64320.1 30.709 127 84 1 250 376 253 375 1.68e-11 67.8
Msa0837210 AT5G65820.1 24.215 223 155 5 159 376 131 344 1.78e-11 67.8
Msa0837210 AT5G57250.1 24.464 233 168 4 146 378 182 406 2.07e-11 67.8
Msa0837210 AT5G55840.2 30.657 137 94 1 252 388 446 581 2.27e-11 67.8
Msa0837210 AT5G55840.1 30.657 137 94 1 252 388 446 581 2.27e-11 67.8
Msa0837210 AT5G55840.3 30.657 137 94 1 252 388 406 541 2.36e-11 67.8
Msa0837210 AT4G26800.1 30.508 118 82 0 252 369 86 203 2.43e-11 66.2
Msa0837210 AT3G59730.1 25.185 270 150 10 409 640 194 449 2.68e-11 67.0
Msa0837210 AT2G24370.1 33.125 160 85 7 495 640 436 587 2.88e-11 67.4
Msa0837210 AT5G21222.1 21.778 225 170 3 153 376 474 693 3.09e-11 67.0
Msa0837210 AT5G21222.2 21.778 225 170 3 153 376 474 693 3.09e-11 67.0
Msa0837210 AT5G21222.4 21.778 225 170 3 153 376 474 693 3.09e-11 67.0
Msa0837210 AT5G21222.3 21.778 225 170 3 153 376 474 693 3.09e-11 67.0
Msa0837210 AT5G59900.1 30.328 122 85 0 252 373 475 596 3.10e-11 67.4
Msa0837210 AT4G26800.3 30.508 118 82 0 252 369 156 273 3.42e-11 66.2
Msa0837210 AT5G16640.1 24.581 179 126 3 212 388 328 499 3.76e-11 66.2
Msa0837210 AT1G12300.1 25.000 200 146 2 170 369 223 418 3.94e-11 66.6
Msa0837210 AT1G20300.1 22.857 210 156 3 161 369 136 340 4.01e-11 66.2
Msa0837210 AT4G26800.2 30.508 118 82 0 252 369 231 348 4.30e-11 66.2
Msa0837210 AT1G64580.1 28.244 131 94 0 252 382 292 422 5.25e-11 65.9
Msa0837210 AT1G64583.1 30.370 135 92 1 252 384 214 348 5.27e-11 65.9
Msa0837210 AT5G01110.1 22.066 213 161 3 156 368 217 424 5.56e-11 66.2
Msa0837210 AT1G61380.2 28.351 194 109 9 460 640 275 451 5.59e-11 66.2
Msa0837210 AT3G60050.2 23.148 216 162 1 153 368 127 338 5.65e-11 65.9
Msa0837210 AT3G60050.1 23.148 216 162 1 153 368 127 338 5.65e-11 65.9
Msa0837210 AT1G64583.2 30.370 135 92 1 252 384 189 323 5.74e-11 65.9
Msa0837210 AT5G01110.2 22.066 213 161 3 156 368 245 452 5.82e-11 66.2
Msa0837210 AT1G03560.1 26.531 196 134 3 204 393 321 512 6.66e-11 65.9
Msa0837210 AT1G61380.1 28.351 194 109 9 460 640 422 598 6.71e-11 66.2
Msa0837210 AT1G65800.1 30.693 202 103 10 468 640 440 633 6.81e-11 66.2
Msa0837210 AT3G04760.1 23.415 205 151 2 170 373 363 562 6.87e-11 65.9
Msa0837210 AT5G18475.1 26.400 125 91 1 250 373 233 357 7.78e-11 65.5
Msa0837210 AT5G59700.1 28.095 210 117 8 455 641 394 592 7.81e-11 65.9
Msa0837210 AT2G16250.2 25.581 215 138 7 448 640 428 642 8.06e-11 65.9
Msa0837210 AT5G04810.1 26.220 164 117 2 211 374 590 749 8.06e-11 65.9
Msa0837210 AT3G04760.2 23.415 205 151 2 170 373 333 532 8.19e-11 65.5
Msa0837210 AT1G13040.2 24.645 211 146 5 168 374 283 484 8.38e-11 65.5
Msa0837210 AT1G13040.1 24.645 211 146 5 168 374 283 484 8.38e-11 65.5
Msa0837210 AT4G23160.1 28.390 236 134 9 420 640 254 469 9.44e-11 65.5

Find 131 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGAAAATGTTTGGATATC+TGG 0.170597 5_4:-11133636 None:intergenic
GCAAGATACTTAGAAGTTTC+AGG 0.242330 5_4:+11133229 Msa0837210:CDS
CAAAATCTGGCTCTTATAAT+TGG 0.262266 5_4:+11135587 Msa0837210:CDS
TTTGAAGATATGAAGAATTC+TGG 0.266472 5_4:+11133816 Msa0837210:CDS
AAGTTACTTTCAGGTGTTTC+AGG 0.271026 5_4:+11135725 Msa0837210:CDS
GTCTATGAGTATGCTGAAAA+TGG 0.278284 5_4:+11135989 Msa0837210:CDS
AAAGTCAATGATTAACCTTA+TGG 0.297432 5_4:-11133427 None:intergenic
ACTGCAGATAAGTTACTTTC+AGG 0.304363 5_4:+11135716 Msa0837210:CDS
CTGTGTGGAATTTCTTCTGC+TGG 0.310260 5_4:+11133262 Msa0837210:CDS
TTGGCTGGATCCGCGGTCTT+TGG 0.315039 5_4:+11133125 Msa0837210:CDS
GAAGATGGTTGATCAAGTTT+TGG 0.326422 5_4:-11135542 Msa0837220:three_prime_UTR
ACCCTTGTTAGTTCAAAGTT+TGG 0.344284 5_4:+11135431 Msa0837210:CDS
GTTAATGAGATGCAAGTTGA+TGG 0.346251 5_4:+11132880 Msa0837210:CDS
TCACAATGTGATCATGTAGA+TGG 0.351608 5_4:+11133087 Msa0837210:CDS
GCATTAGACCTGAAAATGTT+TGG 0.360031 5_4:-11133644 None:intergenic
ATGTCTCTGTGGATTATTCT+TGG 0.369404 5_4:-11136138 Msa0837220:three_prime_UTR
TTCGGTTCTAATTGAAGGTT+TGG 0.375503 5_4:+11132822 Msa0837210:CDS
TGGAAATATTGTGAAACTAA+TGG 0.382814 5_4:+11135931 Msa0837210:CDS
AGTAAAATGTTTGATGAAGT+TGG 0.386223 5_4:+11132850 Msa0837210:CDS
CAAGCCAACAATGTATGAAA+TGG 0.386975 5_4:+11135757 Msa0837210:CDS
ACGTACTTTGAAACAGTATT+CGG 0.388885 5_4:+11132804 Msa0837210:CDS
TACGTCCATGTCGCGCTAGA+AGG 0.402460 5_4:-11133341 None:intergenic
CTTCACTAGCAACTCTTTGA+TGG 0.404260 5_4:-11133856 None:intergenic
GAAGGATGAAGGATTTCTTA+AGG 0.405813 5_4:+11132945 Msa0837210:CDS
AACTCTTTGATGGTCGAATC+AGG 0.406904 5_4:-11133846 None:intergenic
TGCTGGGTTGCTGATCGACC+TGG 0.409148 5_4:+11133279 Msa0837210:CDS
AAGAAATTCCACACAGTATC+CGG 0.412127 5_4:-11133255 None:intergenic
CAGTATTCGGTTCTAATTGA+AGG 0.419628 5_4:+11132817 Msa0837210:CDS
ACTTACAATAACCTTCTATC+AGG 0.420198 5_4:-11133764 None:intergenic
GTCCTTCCACTTGCATTACC+TGG 0.422582 5_4:+11133948 Msa0837210:CDS
TTGCATTACCTGGTCATGTA+TGG 0.429367 5_4:+11133958 Msa0837210:CDS
GCCAGACGCGTATCTGTATA+AGG 0.430893 5_4:+11133740 Msa0837210:CDS
ATCGGAATTCCTTCCACACT+TGG 0.431442 5_4:-11133571 None:intergenic
AACAATGATCGAATACTTTG+TGG 0.433378 5_4:+11133492 Msa0837210:CDS
CAACAAGAGCTGCACTGGCT+TGG 0.436660 5_4:+11133787 Msa0837210:CDS
GGAAATATTGTGAAACTAAT+GGG 0.440270 5_4:+11135932 Msa0837210:CDS
ACTTGAAGAGTGGTTGTTCT+CGG 0.440441 5_4:+11136015 Msa0837210:CDS
CTGAAAATGTTTGGATATCT+GGG 0.442804 5_4:-11133635 None:intergenic
ACACTCTTGATTCTTTCATC+CGG 0.443612 5_4:-11132997 None:intergenic
ACATCCATTTCATACATTGT+TGG 0.446716 5_4:-11135761 Msa0837220:three_prime_UTR
GATTCACTTAAAACCTTGGC+TGG 0.457260 5_4:+11133110 Msa0837210:CDS
AAACAGTTTCCATCATTGTC+AGG 0.459516 5_4:-11135962 Msa0837220:three_prime_UTR
TTGCAGCAGGTGAAGGATGA+AGG 0.460732 5_4:+11132934 Msa0837210:CDS
CATCTTGAAGATCAGAATAG+AGG 0.461168 5_4:+11133383 Msa0837210:CDS
CTTGATCAACCATCTTCAAA+TGG 0.466617 5_4:+11135548 Msa0837210:CDS
CACTCTTGATTCTTTCATCC+GGG 0.466810 5_4:-11132996 None:intergenic
CTGTATAAGGTCCTGATAGA+AGG 0.471205 5_4:+11133753 Msa0837210:CDS
GGTGAGTTTGTTATTGCAGC+AGG 0.472558 5_4:+11132921 Msa0837210:CDS
ACTCGGTGGTTTCGCTTACA+TGG 0.474294 5_4:+11136056 Msa0837210:CDS
AGTTGCTAGTGAAGAGCCTC+TGG 0.476859 5_4:+11133865 Msa0837210:CDS
TCATCTCATCAAGCATGTCC+AGG 0.481198 5_4:-11133596 None:intergenic
GTTTACAAGGGTAATATAGA+TGG 0.483555 5_4:+11135836 Msa0837210:CDS
GTGAAGAGCCTCTGGAAAGA+AGG 0.484880 5_4:+11133873 Msa0837210:CDS
GATTGGTGAATCAGTTTACA+AGG 0.486742 5_4:+11135823 Msa0837210:CDS
TGAAGGATTTCTTAAGGATG+TGG 0.487856 5_4:+11132951 Msa0837210:CDS
TAAGTCAACAAGAGCTGCAC+TGG 0.490541 5_4:+11133782 Msa0837210:CDS
TGTGTGGAATTTCTTCTGCT+GGG 0.490658 5_4:+11133263 Msa0837210:CDS
ATAGCCATGGATGTTGCAAT+TGG 0.492998 5_4:+11136094 Msa0837210:CDS
ATTAACCTTATGGTTCTGAA+TGG 0.498328 5_4:-11133417 None:intergenic
ATCAGGACTGCAATTCTGTA+AGG 0.498653 5_4:-11133154 None:intergenic
CTTATAATTGGTATTAGCCT+AGG 0.502273 5_4:+11135599 Msa0837210:CDS
CAAAGTTCGTGTGGACAACT+AGG 0.503289 5_4:+11133199 Msa0837210:CDS
CTGAGTGAGAATTGTAAGAT+TGG 0.506708 5_4:+11135806 Msa0837210:CDS
ATCAAGCATGTCCAGGGTAT+CGG 0.509612 5_4:-11133589 None:intergenic
ACAATGATCGAATACTTTGT+GGG 0.511017 5_4:+11133493 Msa0837210:CDS
CACCAAACTTTGAACTAACA+AGG 0.512914 5_4:-11135433 Msa0837220:three_prime_UTR
GTTCTAATTGAAGGTTTGGT+TGG 0.519428 5_4:+11132826 Msa0837210:CDS
ATGGGATTCACTTAAAACCT+TGG 0.520730 5_4:+11133106 Msa0837210:CDS
ACCTTATACAGATACGCGTC+TGG 0.524198 5_4:-11133741 None:intergenic
CAGACCAATTGCAACATCCA+TGG 0.524233 5_4:-11136098 Msa0837220:three_prime_UTR
GTATGAAATGGATGTGATCA+TGG 0.524330 5_4:+11135769 Msa0837210:CDS
ATGTGGATGAATTGTTTGAA+GGG 0.525014 5_4:+11132968 Msa0837210:CDS
AAATGCTGATGCTGCTCTGA+AGG 0.525513 5_4:+11133464 Msa0837210:CDS
ACTTAGAAGTTTCAGGTCAC+CGG 0.527754 5_4:+11133236 Msa0837210:CDS
GATGTGGATGAATTGTTTGA+AGG 0.528226 5_4:+11132967 Msa0837210:CDS
CACAATGTGATCATGTAGAT+GGG 0.532033 5_4:+11133088 Msa0837210:CDS
TCTAGTGCTGATACCTCATC+AGG 0.535975 5_4:-11133171 None:intergenic
TTAGTTTCACAATATTTCCA+TGG 0.537931 5_4:-11135928 Msa0837220:three_prime_UTR
TTTGATGGTCGAATCAGGTA+TGG 0.538788 5_4:-11133841 None:intergenic
GGTTAATGTTCTTAAAAGAG+AGG 0.546099 5_4:-11133550 None:intergenic
TTCTATTGATAGCAGTGATG+AGG 0.550194 5_4:+11133026 Msa0837210:CDS
TTAAGAACATTAACCAAGTG+TGG 0.552345 5_4:+11133558 Msa0837210:CDS
ATCTTTGAAAACTTCAAACT+CGG 0.553009 5_4:+11136039 Msa0837210:CDS
GAACATTAACCAAGTGTGGA+AGG 0.555715 5_4:+11133562 Msa0837210:CDS
ATGACCCTTCTAGCGCGACA+TGG 0.556861 5_4:+11133336 Msa0837210:CDS
ACGTCCATGTCGCGCTAGAA+GGG 0.559332 5_4:-11133340 None:intergenic
GCCTCTGGAAAGAAGGTAGA+CGG 0.559458 5_4:+11133880 Msa0837210:CDS
GATGAGAATGAGGACGAGGG+TGG 0.559684 5_4:+11133048 Msa0837210:CDS
AATTGCAACATCCATGGCTA+TGG 0.562845 5_4:-11136092 Msa0837220:three_prime_UTR
ATCTTGAAGATCAGAATAGA+GGG 0.566478 5_4:+11133384 Msa0837210:CDS
GAAAGAAGGTAGACGGAGAG+AGG 0.569327 5_4:+11133887 Msa0837210:CDS
TATATATTATGAGTAAATCC+AGG 0.571391 5_4:-11133297 None:intergenic
CAGTGATGAGGATGAGAATG+AGG 0.572880 5_4:+11133038 Msa0837210:CDS
TCCGTCTACCTTCTTTCCAG+AGG 0.577819 5_4:-11133881 None:intergenic
TGATGAGGTATCAGCACTAG+AGG 0.580742 5_4:+11133173 Msa0837210:CDS
TCAGAGAATAACCATAGCCA+TGG 0.584198 5_4:+11136081 Msa0837210:CDS
TTTGTTATTGCAGCAGGTGA+AGG 0.584701 5_4:+11132927 Msa0837210:CDS
GTTCGTGTGGACAACTAGGT+TGG 0.586491 5_4:+11133203 Msa0837210:CDS
GACTACCATTCAGAACCATA+AGG 0.587707 5_4:+11133412 Msa0837210:CDS
AAGTAACTTATCTGCAGTCT+CGG 0.588582 5_4:-11135711 Msa0837220:three_prime_UTR
TAAAACCTTGGCTGGATCCG+CGG 0.590765 5_4:+11133118 Msa0837210:CDS
CTGACAGTCCATACATGACC+AGG 0.594467 5_4:-11133966 None:intergenic
TGGAAGGAATTCCGATACCC+TGG 0.598845 5_4:+11133578 Msa0837210:CDS
CATTGAAAAGAGTTTCTGCA+CGG 0.599322 5_4:-11133697 None:intergenic
CAATATACGTACACAAGTGA+TGG 0.600647 5_4:-11135650 Msa0837220:three_prime_UTR
TGAGGATGAGAATGAGGACG+AGG 0.601840 5_4:+11133044 Msa0837210:CDS
TTTGAAAACTTCAAACTCGG+TGG 0.605841 5_4:+11136042 Msa0837210:CDS
AAAGACCGCGGATCCAGCCA+AGG 0.608186 5_4:-11133123 None:intergenic
AGGGATCAAAACTGAACGGT+CGG 0.610669 5_4:-11135507 Msa0837220:three_prime_UTR
ATTGTTTGAAGGGATTTGCC+CGG 0.613868 5_4:+11132978 Msa0837210:CDS
AACAAACTCACCGTTCGACT+AGG 0.617703 5_4:-11132910 None:intergenic
CATCTCATCAAGCATGTCCA+GGG 0.618669 5_4:-11133595 None:intergenic
ACATGACCAGGTAATGCAAG+TGG 0.620837 5_4:-11133954 None:intergenic
ACAGAATTGCAGTCCTGATG+AGG 0.621540 5_4:+11133158 Msa0837210:CDS
GCAGCTCTCTTCAACAGCTG+CGG 0.624107 5_4:-11133910 None:intergenic
TGGAATATTACCTAGTCGAA+CGG 0.624584 5_4:+11132900 Msa0837210:CDS
GGTGTGTCTCCTGACAATGA+TGG 0.628519 5_4:+11135953 Msa0837210:CDS
TAGAGGGTGCAAAGTTCGTG+TGG 0.631089 5_4:+11133190 Msa0837210:CDS
ATTGGTGAATCAGTTTACAA+GGG 0.638333 5_4:+11135824 Msa0837210:CDS
GACCAGGTAATGCAAGTGGA+AGG 0.640755 5_4:-11133950 None:intergenic
GAGCTGCGAGGAAGTAAATG+TGG 0.649634 5_4:+11133926 Msa0837210:CDS
GATGAGGTATCAGCACTAGA+GGG 0.650518 5_4:+11133174 Msa0837210:CDS
ACCAAACTTTGAACTAACAA+GGG 0.655493 5_4:-11135432 Msa0837220:three_prime_UTR
GAAATGGATGTGATCATGGA+AGG 0.661178 5_4:+11135773 Msa0837210:CDS
ATTCTGCAGAAGGTAAACCA+TGG 0.662360 5_4:+11135911 Msa0837210:CDS
GAGGATGAGAATGAGGACGA+GGG 0.684142 5_4:+11133045 Msa0837210:CDS
TCACAGGGATCAAAACTGAA+CGG 0.686313 5_4:-11135511 Msa0837220:three_prime_UTR
AAAATGGATCACTTGAAGAG+TGG 0.692384 5_4:+11136005 Msa0837210:CDS
TCAGGTCACCGGATACTGTG+TGG 0.693330 5_4:+11133247 Msa0837210:CDS
AGCTGTTGAAGAGAGCTGCG+AGG 0.717575 5_4:+11133914 Msa0837210:CDS
AAGGCACTAGCCAAAGACCG+CGG 0.751118 5_4:-11133135 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATTGCATATATATAA+TGG + chr5_4:11135046-11135065 Msa0837210:intron 10.0%
!! ATGCAATTATAATATAATAC+AGG - chr5_4:11135038-11135057 None:intergenic 15.0%
!! TATATATTATGAGTAAATCC+AGG - chr5_4:11133300-11133319 None:intergenic 20.0%
!!! TTCAAATAGTTTAGTTTCAA+AGG + chr5_4:11134022-11134041 Msa0837210:intron 20.0%
!!! TCAAATAGTTTAGTTTCAAA+GGG + chr5_4:11134023-11134042 Msa0837210:intron 20.0%
!!! CTTAAACTGTGATTTATTTT+GGG + chr5_4:11134143-11134162 Msa0837210:intron 20.0%
!!! CTTTTTGTAAGAAAATTAGA+AGG - chr5_4:11134440-11134459 None:intergenic 20.0%
!!! AATTTTCTTACAAAAAGAGT+TGG + chr5_4:11134443-11134462 Msa0837210:intron 20.0%
!!! CTTTTTGTAAGAAAATTAGA+AGG - chr5_4:11134440-11134459 None:intergenic 20.0%
!!! AATTTTCTTACAAAAAGAGT+TGG + chr5_4:11134443-11134462 Msa0837210:intron 20.0%
!!! TTTTTTTTTGTTGGTGTAAA+AGG + chr5_4:11134553-11134572 Msa0837210:intron 20.0%
!!! TTTTTTTTGTTGGTGTAAAA+GGG + chr5_4:11134554-11134573 Msa0837210:intron 20.0%
!! TAAAGATGGTAAGAATAATA+TGG - chr5_4:11135212-11135231 None:intergenic 20.0%
! AGTAAAATGTTTGATGAAGT+TGG + chr5_4:11132850-11132869 Msa0837210:CDS 25.0%
! AAAGTCAATGATTAACCTTA+TGG - chr5_4:11133430-11133449 None:intergenic 25.0%
!!! AGGTTAATCATTGACTTTTA+TGG + chr5_4:11133432-11133451 Msa0837210:CDS 25.0%
!!! GGTTAATCATTGACTTTTAT+GGG + chr5_4:11133433-11133452 Msa0837210:CDS 25.0%
!! CTTGATGAGATGATTTTAAA+CGG + chr5_4:11133606-11133625 Msa0837210:CDS 25.0%
! TTTGAAGATATGAAGAATTC+TGG + chr5_4:11133816-11133835 Msa0837210:CDS 25.0%
! CCAAAATAAATCACAGTTTA+AGG - chr5_4:11134145-11134164 None:intergenic 25.0%
!! CCTTAAACTGTGATTTATTT+TGG + chr5_4:11134142-11134161 Msa0837210:intron 25.0%
!!! GAGTTTTGAGAATGTATTAT+TGG + chr5_4:11134204-11134223 Msa0837210:intron 25.0%
! TTGCACAATCATATAATGAA+TGG + chr5_4:11134319-11134338 Msa0837210:intron 25.0%
! TTACACCAACAAAAAAAAAG+AGG - chr5_4:11134552-11134571 None:intergenic 25.0%
! TTAACACCGTTATATTCTTA+TGG + chr5_4:11134657-11134676 Msa0837210:intron 25.0%
! ATTCTGCCATAAGAATATAA+CGG - chr5_4:11134666-11134685 None:intergenic 25.0%
! TATTATTTGTTCCCTATTTC+TGG - chr5_4:11134935-11134954 None:intergenic 25.0%
! TATATTGAAACCTATGTAAC+TGG + chr5_4:11134984-11135003 Msa0837210:intron 25.0%
! TATGGTTTAACGTTTAACAA+AGG - chr5_4:11135078-11135097 None:intergenic 25.0%
! TATGGTATTATAACCCAATT+TGG - chr5_4:11135194-11135213 None:intergenic 25.0%
!! TGTTCAATTGATTCTTTGAA+GGG - chr5_4:11135361-11135380 None:intergenic 25.0%
!! TTGTTCAATTGATTCTTTGA+AGG - chr5_4:11135362-11135381 None:intergenic 25.0%
! TCAAAGAATCAATTGAACAA+AGG + chr5_4:11135362-11135381 Msa0837210:intron 25.0%
! AGTATCTTATTACTTATGTG+TGG + chr5_4:11135390-11135409 Msa0837210:intron 25.0%
! TTAGTTTCACAATATTTCCA+TGG - chr5_4:11135931-11135950 Msa0837220:three_prime_UTR 25.0%
! TGGAAATATTGTGAAACTAA+TGG + chr5_4:11135931-11135950 Msa0837210:CDS 25.0%
! GGAAATATTGTGAAACTAAT+GGG + chr5_4:11135932-11135951 Msa0837210:CDS 25.0%
!! ATCTTTGAAAACTTCAAACT+CGG + chr5_4:11136039-11136058 Msa0837210:CDS 25.0%
!! ACGTACTTTGAAACAGTATT+CGG + chr5_4:11132804-11132823 Msa0837210:CDS 30.0%
ATGTGGATGAATTGTTTGAA+GGG + chr5_4:11132968-11132987 Msa0837210:CDS 30.0%
ATCTTGAAGATCAGAATAGA+GGG + chr5_4:11133384-11133403 Msa0837210:CDS 30.0%
!! ATTAACCTTATGGTTCTGAA+TGG - chr5_4:11133420-11133439 None:intergenic 30.0%
AACAATGATCGAATACTTTG+TGG + chr5_4:11133492-11133511 Msa0837210:CDS 30.0%
ACAATGATCGAATACTTTGT+GGG + chr5_4:11133493-11133512 Msa0837210:CDS 30.0%
GGTTAATGTTCTTAAAAGAG+AGG - chr5_4:11133553-11133572 None:intergenic 30.0%
TTAAGAACATTAACCAAGTG+TGG + chr5_4:11133558-11133577 Msa0837210:CDS 30.0%
CTGAAAATGTTTGGATATCT+GGG - chr5_4:11133638-11133657 None:intergenic 30.0%
! ATGCAGTATTTTTCACAACT+TGG + chr5_4:11133663-11133682 Msa0837210:CDS 30.0%
ACTTACAATAACCTTCTATC+AGG - chr5_4:11133767-11133786 None:intergenic 30.0%
AAATCACAGTTTAAGGAACT+TGG - chr5_4:11134138-11134157 None:intergenic 30.0%
!!! AAACTGTGATTTATTTTGGG+AGG + chr5_4:11134146-11134165 Msa0837210:intron 30.0%
!!! AACTGTGATTTATTTTGGGA+GGG + chr5_4:11134147-11134166 Msa0837210:intron 30.0%
! TACTGCACCTTAAAACTTTT+TGG - chr5_4:11134177-11134196 None:intergenic 30.0%
TTTGAGAATGTATTATTGGC+AGG + chr5_4:11134208-11134227 Msa0837210:intron 30.0%
TCATATAATGAATGGACCTT+TGG + chr5_4:11134327-11134346 Msa0837210:intron 30.0%
!!! GAGTTCCTCTTTTTTTTTGT+TGG + chr5_4:11134544-11134563 Msa0837210:intron 30.0%
TGAATATTAATCCCTCGAAT+AGG + chr5_4:11134595-11134614 Msa0837210:intron 30.0%
GAATATTAATCCCTCGAATA+GGG + chr5_4:11134596-11134615 Msa0837210:intron 30.0%
!!! CTTTTTTTTAGGCATAGCAT+GGG - chr5_4:11134730-11134749 None:intergenic 30.0%
!!! ACTTTTTTTTAGGCATAGCA+TGG - chr5_4:11134731-11134750 None:intergenic 30.0%
TATTAGATGTCAAGCTAATG+TGG + chr5_4:11134872-11134891 Msa0837210:intron 30.0%
TGCCTTTACCAAAATGTTAA+GGG - chr5_4:11135117-11135136 None:intergenic 30.0%
ATGCCTTTACCAAAATGTTA+AGG - chr5_4:11135118-11135137 None:intergenic 30.0%
TGCGCAGAATATAATAAAGA+TGG - chr5_4:11135226-11135245 None:intergenic 30.0%
GCATGATTTCATACTTGTTT+GGG + chr5_4:11135243-11135262 Msa0837210:intron 30.0%
TTTCAAATCTTAGACACTGT+TGG - chr5_4:11135274-11135293 None:intergenic 30.0%
ACCAAACTTTGAACTAACAA+GGG - chr5_4:11135435-11135454 Msa0837220:three_prime_UTR 30.0%
! TTTTCAGCTAACATTTCAAC+TGG - chr5_4:11135464-11135483 Msa0837220:three_prime_UTR 30.0%
! CTTTTTCTTCCATTTGAAGA+TGG - chr5_4:11135560-11135579 Msa0837220:three_prime_UTR 30.0%
!! CAAAATCTGGCTCTTATAAT+TGG + chr5_4:11135587-11135606 Msa0837210:CDS 30.0%
! CTTATAATTGGTATTAGCCT+AGG + chr5_4:11135599-11135618 Msa0837210:CDS 30.0%
!! AAATGAAAAAAGCACTTCCT+AGG - chr5_4:11135619-11135638 Msa0837220:three_prime_UTR 30.0%
ACATCCATTTCATACATTGT+TGG - chr5_4:11135764-11135783 Msa0837220:three_prime_UTR 30.0%
ATTGGTGAATCAGTTTACAA+GGG + chr5_4:11135824-11135843 Msa0837210:CDS 30.0%
GTTTACAAGGGTAATATAGA+TGG + chr5_4:11135836-11135855 Msa0837210:CDS 30.0%
AATCAAAAAAGATGCTTCTG+AGG + chr5_4:11135880-11135899 Msa0837210:CDS 30.0%
! CAGTATTCGGTTCTAATTGA+AGG + chr5_4:11132817-11132836 Msa0837210:CDS 35.0%
! TTCGGTTCTAATTGAAGGTT+TGG + chr5_4:11132822-11132841 Msa0837210:CDS 35.0%
! GTTCTAATTGAAGGTTTGGT+TGG + chr5_4:11132826-11132845 Msa0837210:CDS 35.0%
! GTTAATGAGATGCAAGTTGA+TGG + chr5_4:11132880-11132899 Msa0837210:CDS 35.0%
TGGAATATTACCTAGTCGAA+CGG + chr5_4:11132900-11132919 Msa0837210:CDS 35.0%
GAAGGATGAAGGATTTCTTA+AGG + chr5_4:11132945-11132964 Msa0837210:CDS 35.0%
TGAAGGATTTCTTAAGGATG+TGG + chr5_4:11132951-11132970 Msa0837210:CDS 35.0%
GATGTGGATGAATTGTTTGA+AGG + chr5_4:11132967-11132986 Msa0837210:CDS 35.0%
ACACTCTTGATTCTTTCATC+CGG - chr5_4:11133000-11133019 None:intergenic 35.0%
! TTCTATTGATAGCAGTGATG+AGG + chr5_4:11133026-11133045 Msa0837210:CDS 35.0%
TCACAATGTGATCATGTAGA+TGG + chr5_4:11133087-11133106 Msa0837210:CDS 35.0%
CACAATGTGATCATGTAGAT+GGG + chr5_4:11133088-11133107 Msa0837210:CDS 35.0%
ATGGGATTCACTTAAAACCT+TGG + chr5_4:11133106-11133125 Msa0837210:CDS 35.0%
GCAAGATACTTAGAAGTTTC+AGG + chr5_4:11133229-11133248 Msa0837210:CDS 35.0%
AAGAAATTCCACACAGTATC+CGG - chr5_4:11133258-11133277 None:intergenic 35.0%
CATCTTGAAGATCAGAATAG+AGG + chr5_4:11133383-11133402 Msa0837210:CDS 35.0%
CCTGAAAATGTTTGGATATC+TGG - chr5_4:11133639-11133658 None:intergenic 35.0%
! CCAGATATCCAAACATTTTC+AGG + chr5_4:11133636-11133655 Msa0837210:CDS 35.0%
GCATTAGACCTGAAAATGTT+TGG - chr5_4:11133647-11133666 None:intergenic 35.0%
CATTGAAAAGAGTTTCTGCA+CGG - chr5_4:11133700-11133719 None:intergenic 35.0%
TTGTGCTTAGATTTCATGCA+TGG - chr5_4:11134093-11134112 None:intergenic 35.0%
TCTAAGCACAAAGTAACAAG+CGG + chr5_4:11134102-11134121 Msa0837210:intron 35.0%
!!! ACTGTGATTTATTTTGGGAG+GGG + chr5_4:11134148-11134167 Msa0837210:intron 35.0%
GATCCTTCATTGTATTCACT+TGG + chr5_4:11134276-11134295 Msa0837210:intron 35.0%
TGACCAAGTGAATACAATGA+AGG - chr5_4:11134282-11134301 None:intergenic 35.0%
!! TTACTTCTAGCTTAACCAGT+GGG - chr5_4:11134700-11134719 None:intergenic 35.0%
!!! GACATGGGTCACTTTTTTTT+AGG - chr5_4:11134741-11134760 None:intergenic 35.0%
ACGATTGAATGAGATGACAT+GGG - chr5_4:11134756-11134775 None:intergenic 35.0%
AACGATTGAATGAGATGACA+TGG - chr5_4:11134757-11134776 None:intergenic 35.0%
TCATCTCATTCAATCGTTCT+TGG + chr5_4:11134759-11134778 Msa0837210:intron 35.0%
!!! AATCGTTCTTGGCTTGTTTT+CGG + chr5_4:11134770-11134789 Msa0837210:intron 35.0%
AAAAAGCTAGACTCAAGCAA+AGG + chr5_4:11134813-11134832 Msa0837210:intron 35.0%
! TTTCTGGTACATAGCTACTT+CGG - chr5_4:11134919-11134938 None:intergenic 35.0%
AGTAGCTATGTACCAGAAAT+AGG + chr5_4:11134920-11134939 Msa0837210:intron 35.0%
GTAGCTATGTACCAGAAATA+GGG + chr5_4:11134921-11134940 Msa0837210:intron 35.0%
! TTGTTTGCCCCTTAACATTT+TGG + chr5_4:11135106-11135125 Msa0837210:intron 35.0%
GCCTTTACCAAAATGTTAAG+GGG - chr5_4:11135116-11135135 None:intergenic 35.0%
CATCAAGTTAGATGGTCATT+AGG + chr5_4:11135135-11135154 Msa0837210:intron 35.0%
CGCATGATTTCATACTTGTT+TGG + chr5_4:11135242-11135261 Msa0837210:intron 35.0%
TCTTATTACTTATGTGTGGC+AGG + chr5_4:11135394-11135413 Msa0837210:intron 35.0%
ACCCTTGTTAGTTCAAAGTT+TGG + chr5_4:11135431-11135450 Msa0837210:CDS 35.0%
CACCAAACTTTGAACTAACA+AGG - chr5_4:11135436-11135455 Msa0837220:three_prime_UTR 35.0%
!! GTTTTGGTAAACTTGTCACA+GGG - chr5_4:11135529-11135548 Msa0837220:three_prime_UTR 35.0%
!! AGTTTTGGTAAACTTGTCAC+AGG - chr5_4:11135530-11135549 Msa0837220:three_prime_UTR 35.0%
! GAAGATGGTTGATCAAGTTT+TGG - chr5_4:11135545-11135564 Msa0837220:three_prime_UTR 35.0%
CTTGATCAACCATCTTCAAA+TGG + chr5_4:11135548-11135567 Msa0837210:CDS 35.0%
AAAAAGCAGCAGTCAAAATC+TGG + chr5_4:11135574-11135593 Msa0837210:CDS 35.0%
CAATATACGTACACAAGTGA+TGG - chr5_4:11135653-11135672 Msa0837220:three_prime_UTR 35.0%
AAGTAACTTATCTGCAGTCT+CGG - chr5_4:11135714-11135733 Msa0837220:three_prime_UTR 35.0%
! ACTGCAGATAAGTTACTTTC+AGG + chr5_4:11135716-11135735 Msa0837210:CDS 35.0%
! AAGTTACTTTCAGGTGTTTC+AGG + chr5_4:11135725-11135744 Msa0837210:CDS 35.0%
CAAGCCAACAATGTATGAAA+TGG + chr5_4:11135757-11135776 Msa0837210:CDS 35.0%
GTATGAAATGGATGTGATCA+TGG + chr5_4:11135769-11135788 Msa0837210:CDS 35.0%
CTGAGTGAGAATTGTAAGAT+TGG + chr5_4:11135806-11135825 Msa0837210:CDS 35.0%
GATTGGTGAATCAGTTTACA+AGG + chr5_4:11135823-11135842 Msa0837210:CDS 35.0%
AAACAGTTTCCATCATTGTC+AGG - chr5_4:11135965-11135984 Msa0837220:three_prime_UTR 35.0%
!! CAATGATGGAAACTGTTTTC+TGG + chr5_4:11135967-11135986 Msa0837210:CDS 35.0%
GTCTATGAGTATGCTGAAAA+TGG + chr5_4:11135989-11136008 Msa0837210:CDS 35.0%
AAAATGGATCACTTGAAGAG+TGG + chr5_4:11136005-11136024 Msa0837210:CDS 35.0%
TTTGAAAACTTCAAACTCGG+TGG + chr5_4:11136042-11136061 Msa0837210:CDS 35.0%
!! TTTGTTATTGCAGCAGGTGA+AGG + chr5_4:11132927-11132946 Msa0837210:CDS 40.0%
ATTGTTTGAAGGGATTTGCC+CGG + chr5_4:11132978-11132997 Msa0837210:CDS 40.0%
CACTCTTGATTCTTTCATCC+GGG - chr5_4:11132999-11133018 None:intergenic 40.0%
GATTCACTTAAAACCTTGGC+TGG + chr5_4:11133110-11133129 Msa0837210:CDS 40.0%
ATCAGGACTGCAATTCTGTA+AGG - chr5_4:11133157-11133176 None:intergenic 40.0%
! ACTTAGAAGTTTCAGGTCAC+CGG + chr5_4:11133236-11133255 Msa0837210:CDS 40.0%
TGTGTGGAATTTCTTCTGCT+GGG + chr5_4:11133263-11133282 Msa0837210:CDS 40.0%
GACTACCATTCAGAACCATA+AGG + chr5_4:11133412-11133431 Msa0837210:CDS 40.0%
GAACATTAACCAAGTGTGGA+AGG + chr5_4:11133562-11133581 Msa0837210:CDS 40.0%
! CGTGCAGAAACTCTTTTCAA+TGG + chr5_4:11133698-11133717 Msa0837210:CDS 40.0%
! TTTTCAATGGTCAGACAGAG+CGG + chr5_4:11133711-11133730 Msa0837210:CDS 40.0%
CTGTATAAGGTCCTGATAGA+AGG + chr5_4:11133753-11133772 Msa0837210:CDS 40.0%
! TTTGATGGTCGAATCAGGTA+TGG - chr5_4:11133844-11133863 None:intergenic 40.0%
! AACTCTTTGATGGTCGAATC+AGG - chr5_4:11133849-11133868 None:intergenic 40.0%
CTTCACTAGCAACTCTTTGA+TGG - chr5_4:11133859-11133878 None:intergenic 40.0%
TTGCATTACCTGGTCATGTA+TGG + chr5_4:11133958-11133977 Msa0837210:CDS 40.0%
ATAGCCCAATGGATAACTCT+AGG - chr5_4:11134051-11134070 None:intergenic 40.0%
TCCATTGGGCTATATGATAG+AGG + chr5_4:11134058-11134077 Msa0837210:intron 40.0%
ACCTCTATCATATAGCCCAA+TGG - chr5_4:11134062-11134081 None:intergenic 40.0%
! GGGGTTGCCAAAAAGTTTTA+AGG + chr5_4:11134167-11134186 Msa0837210:intron 40.0%
! GGAATTAGCTCTTGTTCTGA+TGG + chr5_4:11134248-11134267 Msa0837210:intron 40.0%
ATTAATCCCTCGAATAGGGT+TGG + chr5_4:11134600-11134619 Msa0837210:intron 40.0%
TGTTATCCAACCCTATTCGA+GGG - chr5_4:11134609-11134628 None:intergenic 40.0%
ATGTTATCCAACCCTATTCG+AGG - chr5_4:11134610-11134629 None:intergenic 40.0%
!! CTTACTTCTAGCTTAACCAG+TGG - chr5_4:11134701-11134720 None:intergenic 40.0%
CAAAGGAGAGTAGGTAAGAA+GGG + chr5_4:11134830-11134849 Msa0837210:intron 40.0%
GTTGACACTTCCAGTTACAT+AGG - chr5_4:11134997-11135016 None:intergenic 40.0%
GGGCAAACAAGCAAAAGATA+TGG - chr5_4:11135096-11135115 None:intergenic 40.0%
!! GCCCCTTAACATTTTGGTAA+AGG + chr5_4:11135112-11135131 Msa0837210:intron 40.0%
!! GGTAAAGGCATCAAGTTAGA+TGG + chr5_4:11135127-11135146 Msa0837210:intron 40.0%
ATCGTGTATGGACACCAAAT+TGG + chr5_4:11135177-11135196 Msa0837210:intron 40.0%
TCGTGTATGGACACCAAATT+GGG + chr5_4:11135178-11135197 Msa0837210:intron 40.0%
TCACAGGGATCAAAACTGAA+CGG - chr5_4:11135514-11135533 Msa0837220:three_prime_UTR 40.0%
GAAATGGATGTGATCATGGA+AGG + chr5_4:11135773-11135792 Msa0837210:CDS 40.0%
GGAGCTAAAAATTCTGCAGA+AGG + chr5_4:11135901-11135920 Msa0837210:CDS 40.0%
ATTCTGCAGAAGGTAAACCA+TGG + chr5_4:11135911-11135930 Msa0837210:CDS 40.0%
ACTTGAAGAGTGGTTGTTCT+CGG + chr5_4:11136015-11136034 Msa0837210:CDS 40.0%
TCAGAGAATAACCATAGCCA+TGG + chr5_4:11136081-11136100 Msa0837210:CDS 40.0%
AATTGCAACATCCATGGCTA+TGG - chr5_4:11136095-11136114 Msa0837220:three_prime_UTR 40.0%
ATAGCCATGGATGTTGCAAT+TGG + chr5_4:11136094-11136113 Msa0837210:CDS 40.0%
AACAAACTCACCGTTCGACT+AGG - chr5_4:11132913-11132932 None:intergenic 45.0%
!! GGTGAGTTTGTTATTGCAGC+AGG + chr5_4:11132921-11132940 Msa0837210:CDS 45.0%
CAGTGATGAGGATGAGAATG+AGG + chr5_4:11133038-11133057 Msa0837210:CDS 45.0%
ACAGAATTGCAGTCCTGATG+AGG + chr5_4:11133158-11133177 Msa0837210:CDS 45.0%
!! TCTAGTGCTGATACCTCATC+AGG - chr5_4:11133174-11133193 None:intergenic 45.0%
! TGATGAGGTATCAGCACTAG+AGG + chr5_4:11133173-11133192 Msa0837210:CDS 45.0%
! GATGAGGTATCAGCACTAGA+GGG + chr5_4:11133174-11133193 Msa0837210:CDS 45.0%
CAAAGTTCGTGTGGACAACT+AGG + chr5_4:11133199-11133218 Msa0837210:CDS 45.0%
CTGTGTGGAATTTCTTCTGC+TGG + chr5_4:11133262-11133281 Msa0837210:CDS 45.0%
AAATGCTGATGCTGCTCTGA+AGG + chr5_4:11133464-11133483 Msa0837210:CDS 45.0%
ATCGGAATTCCTTCCACACT+TGG - chr5_4:11133574-11133593 None:intergenic 45.0%
ATCAAGCATGTCCAGGGTAT+CGG - chr5_4:11133592-11133611 None:intergenic 45.0%
CATCTCATCAAGCATGTCCA+GGG - chr5_4:11133598-11133617 None:intergenic 45.0%
TCATCTCATCAAGCATGTCC+AGG - chr5_4:11133599-11133618 None:intergenic 45.0%
ACCTTATACAGATACGCGTC+TGG - chr5_4:11133744-11133763 None:intergenic 45.0%
TAAGTCAACAAGAGCTGCAC+TGG + chr5_4:11133782-11133801 Msa0837210:CDS 45.0%
ACATGACCAGGTAATGCAAG+TGG - chr5_4:11133957-11133976 None:intergenic 45.0%
GGTGCCTAGAGTTATCCATT+GGG + chr5_4:11134044-11134063 Msa0837210:intron 45.0%
GCTCTCAACACATCAACCAA+AGG - chr5_4:11134346-11134365 None:intergenic 45.0%
!! TGCTGACTTCTGCAACTTGA+GGG + chr5_4:11134380-11134399 Msa0837210:intron 45.0%
AGACTCAAGCAAAGGAGAGT+AGG + chr5_4:11134821-11134840 Msa0837210:intron 45.0%
GCAAAGGAGAGTAGGTAAGA+AGG + chr5_4:11134829-11134848 Msa0837210:intron 45.0%
AGGGATCAAAACTGAACGGT+CGG - chr5_4:11135510-11135529 Msa0837220:three_prime_UTR 45.0%
CAGACCAATTGCAACATCCA+TGG - chr5_4:11136101-11136120 Msa0837220:three_prime_UTR 45.0%
TTGCAGCAGGTGAAGGATGA+AGG + chr5_4:11132934-11132953 Msa0837210:CDS 50.0%
TGAGGATGAGAATGAGGACG+AGG + chr5_4:11133044-11133063 Msa0837210:CDS 50.0%
GAGGATGAGAATGAGGACGA+GGG + chr5_4:11133045-11133064 Msa0837210:CDS 50.0%
TAAAACCTTGGCTGGATCCG+CGG + chr5_4:11133118-11133137 Msa0837210:CDS 50.0%
! TAGAGGGTGCAAAGTTCGTG+TGG + chr5_4:11133190-11133209 Msa0837210:CDS 50.0%
GTTCGTGTGGACAACTAGGT+TGG + chr5_4:11133203-11133222 Msa0837210:CDS 50.0%
TGGAAGGAATTCCGATACCC+TGG + chr5_4:11133578-11133597 Msa0837210:CDS 50.0%
GCCAGACGCGTATCTGTATA+AGG + chr5_4:11133740-11133759 Msa0837210:CDS 50.0%
AGTTGCTAGTGAAGAGCCTC+TGG + chr5_4:11133865-11133884 Msa0837210:CDS 50.0%
! GTGAAGAGCCTCTGGAAAGA+AGG + chr5_4:11133873-11133892 Msa0837210:CDS 50.0%
! GCCTCTGGAAAGAAGGTAGA+CGG + chr5_4:11133880-11133899 Msa0837210:CDS 50.0%
TCCGTCTACCTTCTTTCCAG+AGG - chr5_4:11133884-11133903 None:intergenic 50.0%
GAAAGAAGGTAGACGGAGAG+AGG + chr5_4:11133887-11133906 Msa0837210:CDS 50.0%
GAGCTGCGAGGAAGTAAATG+TGG + chr5_4:11133926-11133945 Msa0837210:CDS 50.0%
GTCCTTCCACTTGCATTACC+TGG + chr5_4:11133948-11133967 Msa0837210:CDS 50.0%
GACCAGGTAATGCAAGTGGA+AGG - chr5_4:11133953-11133972 None:intergenic 50.0%
CTGACAGTCCATACATGACC+AGG - chr5_4:11133969-11133988 None:intergenic 50.0%
GGGTGCCTAGAGTTATCCAT+TGG + chr5_4:11134043-11134062 Msa0837210:intron 50.0%
!! CAGGACATGAGTTGATGCTC+AGG + chr5_4:11134227-11134246 Msa0837210:intron 50.0%
CAAGTTGCAGAAGTCAGCAG+AGG - chr5_4:11134379-11134398 None:intergenic 50.0%
!! CTGCTGACTTCTGCAACTTG+AGG + chr5_4:11134379-11134398 Msa0837210:intron 50.0%
! GCTGACTTCTGCAACTTGAG+GGG + chr5_4:11134381-11134400 Msa0837210:intron 50.0%
GAATTCGAACTCGAACCCAC+TGG + chr5_4:11134682-11134701 Msa0837210:intron 50.0%
CATACACGATGTCAGCTAGC+TGG - chr5_4:11135167-11135186 None:intergenic 50.0%
CAGCTAGCTGACATCGTGTA+TGG + chr5_4:11135165-11135184 Msa0837210:intron 50.0%
GGTGTGTCTCCTGACAATGA+TGG + chr5_4:11135953-11135972 Msa0837210:CDS 50.0%
! ACTCGGTGGTTTCGCTTACA+TGG + chr5_4:11136056-11136075 Msa0837210:CDS 50.0%
GATGAGAATGAGGACGAGGG+TGG + chr5_4:11133048-11133067 Msa0837210:CDS 55.0%
! AAGGCACTAGCCAAAGACCG+CGG - chr5_4:11133138-11133157 None:intergenic 55.0%
TCAGGTCACCGGATACTGTG+TGG + chr5_4:11133247-11133266 Msa0837210:CDS 55.0%
ATGACCCTTCTAGCGCGACA+TGG + chr5_4:11133336-11133355 Msa0837210:CDS 55.0%
ACGTCCATGTCGCGCTAGAA+GGG - chr5_4:11133343-11133362 None:intergenic 55.0%
TACGTCCATGTCGCGCTAGA+AGG - chr5_4:11133344-11133363 None:intergenic 55.0%
!! CAACAAGAGCTGCACTGGCT+TGG + chr5_4:11133787-11133806 Msa0837210:CDS 55.0%
GCAGCTCTCTTCAACAGCTG+CGG - chr5_4:11133913-11133932 None:intergenic 55.0%
AGCTGTTGAAGAGAGCTGCG+AGG + chr5_4:11133914-11133933 Msa0837210:CDS 55.0%
AAAGACCGCGGATCCAGCCA+AGG - chr5_4:11133126-11133145 None:intergenic 60.0%
TTGGCTGGATCCGCGGTCTT+TGG + chr5_4:11133125-11133144 Msa0837210:CDS 60.0%
TGCTGGGTTGCTGATCGACC+TGG + chr5_4:11133279-11133298 Msa0837210:CDS 60.0%
CACGATGTCAGCTAGCTGGC+TGG - chr5_4:11135163-11135182 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 11132793 11136147 11132793 ID=Msa0837210;Name=Msa0837210
chr5_4 mRNA 11132793 11136147 11132793 ID=Msa0837210-mRNA-1;Parent=Msa0837210;Name=Msa0837210-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|2|0|648
chr5_4 exon 11132793 11134007 11132793 ID=Msa0837210-mRNA-1:exon:4838;Parent=Msa0837210-mRNA-1
chr5_4 exon 11135416 11136147 11135416 ID=Msa0837210-mRNA-1:exon:4839;Parent=Msa0837210-mRNA-1
chr5_4 CDS 11132793 11134007 11132793 ID=Msa0837210-mRNA-1:cds;Parent=Msa0837210-mRNA-1
chr5_4 CDS 11135416 11136147 11135416 ID=Msa0837210-mRNA-1:cds;Parent=Msa0837210-mRNA-1
Gene Sequence

>Msa0837210

ATGAGGATTAAACGTACTTTGAAACAGTATTCGGTTCTAATTGAAGGTTTGGTTGGTAGTAAAATGTTTGATGAAGTTGGAGTTTTAGTTAATGAGATGCAAGTTGATGGAATATTACCTAGTCGAACGGTGAGTTTGTTATTGCAGCAGGTGAAGGATGAAGGATTTCTTAAGGATGTGGATGAATTGTTTGAAGGGATTTGCCCGGATGAAAGAATCAAGAGTGTAAGTTTTTCTATTGATAGCAGTGATGAGGATGAGAATGAGGACGAGGGTGGAAATGAGAATGAAGTTTCACAATGTGATCATGTAGATGGGATTCACTTAAAACCTTGGCTGGATCCGCGGTCTTTGGCTAGTGCCTTACAGAATTGCAGTCCTGATGAGGTATCAGCACTAGAGGGTGCAAAGTTCGTGTGGACAACTAGGTTGGTATGCAAGATACTTAGAAGTTTCAGGTCACCGGATACTGTGTGGAATTTCTTCTGCTGGGTTGCTGATCGACCTGGATTTACTCATAATATATACACAGTGCAAAGAATCATGACCCTTCTAGCGCGACATGGACGTACTGAATTAGTTGATAGACTCATCTTGAAGATCAGAATAGAGGGAATGAGACTACCATTCAGAACCATAAGGTTAATCATTGACTTTTATGGGATTTCAAAAAATGCTGATGCTGCTCTGAAGGTTTTCAACAATGATCGAATACTTTGTGGGTCTATATCAAAAGTTAACTTGATGCTTCTGTATTCCTCTCTTTTAAGAACATTAACCAAGTGTGGAAGGAATTCCGATACCCTGGACATGCTTGATGAGATGATTTTAAACGGCATTTGCCCAGATATCCAAACATTTTCAGGTCTAATGCAGTATTTTTCACAACTTGGAGACATTAAAACCGTGCAGAAACTCTTTTCAATGGTCAGACAGAGCGGTTTCGAGCCAGACGCGTATCTGTATAAGGTCCTGATAGAAGGTTATTGTAAGTCAACAAGAGCTGCACTGGCTTGGAGACTATTTGAAGATATGAAGAATTCTGGTTCCATACCTGATTCGACCATCAAAGAGTTGCTAGTGAAGAGCCTCTGGAAAGAAGGTAGACGGAGAGAGGCCGCAGCTGTTGAAGAGAGCTGCGAGGAAGTAAATGTGGTCCTTCCACTTGCATTACCTGGTCATGTATGGACTGTCAGCTCTGAAGATCTCACAAAAGATAACGACAATGTTACCCTTGTTAGTTCAAAGTTTGGTGCATCACCAGTTGAAATGTTAGCTGAAAACAATCATAACTTCACTGCTTCAACCGACCGTTCAGTTTTGATCCCTGTGACAAGTTTACCAAAACTTGATCAACCATCTTCAAATGGAAGAAAAAGCAGCAGTCAAAATCTGGCTCTTATAATTGGTATTAGCCTAGGAAGTGCTTTTTTCATTTTAGTTTTAACACCATCACTTGTGTACGTATATTGTCTCAAAATGAAGAGATTGAATAGAAGTACTTCATCGTCCGAGACTGCAGATAAGTTACTTTCAGGTGTTTCAGGTTATGTAAGCAAGCCAACAATGTATGAAATGGATGTGATCATGGAAGGTACAATGAATCTGAGTGAGAATTGTAAGATTGGTGAATCAGTTTACAAGGGTAATATAGATGGTAGAGTTTTAGCAGTGAAAAAAATCAAAAAAGATGCTTCTGAGGAGCTAAAAATTCTGCAGAAGGTAAACCATGGAAATATTGTGAAACTAATGGGTGTGTCTCCTGACAATGATGGAAACTGTTTTCTGGTCTATGAGTATGCTGAAAATGGATCACTTGAAGAGTGGTTGTTCTCGGAATCTTTGAAAACTTCAAACTCGGTGGTTTCGCTTACATGGTCTCAGAGAATAACCATAGCCATGGATGTTGCAATTGGTCTGCAAATGAACATACTTATCCAAGAATAA
Protein sequence

>Msa0837210

MRIKRTLKQYSVLIEGLVGSKMFDEVGVLVNEMQVDGILPSRTVSLLLQQVKDEGFLKDVDELFEGICPDERIKSVSFSIDSSDEDENEDEGGNENEVSQCDHVDGIHLKPWLDPRSLASALQNCSPDEVSALEGAKFVWTTRLVCKILRSFRSPDTVWNFFCWVADRPGFTHNIYTVQRIMTLLARHGRTELVDRLILKIRIEGMRLPFRTIRLIIDFYGISKNADAALKVFNNDRILCGSISKVNLMLLYSSLLRTLTKCGRNSDTLDMLDEMILNGICPDIQTFSGLMQYFSQLGDIKTVQKLFSMVRQSGFEPDAYLYKVLIEGYCKSTRAALAWRLFEDMKNSGSIPDSTIKELLVKSLWKEGRRREAAAVEESCEEVNVVLPLALPGHVWTVSSEDLTKDNDNVTLVSSKFGASPVEMLAENNHNFTASTDRSVLIPVTSLPKLDQPSSNGRKSSSQNLALIIGISLGSAFFILVLTPSLVYVYCLKMKRLNRSTSSSETADKLLSGVSGYVSKPTMYEMDVIMEGTMNLSENCKIGESVYKGNIDGRVLAVKKIKKDASEELKILQKVNHGNIVKLMGVSPDNDGNCFLVYEYAENGSLEEWLFSESLKTSNSVVSLTWSQRITIAMDVAIGLQMNILIQE*