Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840900 | XP_003612709.1 | 98.790 | 496 | 5 | 1 | 1 | 495 | 1 | 496 | 0.0 | 981 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840900 | sp|F4ICK8|IWS1_ARATH | 64.844 | 512 | 153 | 10 | 1 | 495 | 1 | 502 | 0.0 | 595 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840900 | G7K9K8 | 98.790 | 496 | 5 | 1 | 1 | 495 | 1 | 496 | 0.0 | 981 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0840900 | TR | IWS1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840900 | MtrunA17_Chr5g0410141 | 98.790 | 496 | 5 | 1 | 1 | 495 | 1 | 496 | 0.0 | 981 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840900 | AT1G32130.1 | 64.844 | 512 | 153 | 10 | 1 | 495 | 1 | 502 | 0.0 | 595 |
| Msa0840900 | AT1G32130.2 | 63.867 | 512 | 149 | 11 | 1 | 495 | 1 | 493 | 0.0 | 576 |
| Msa0840900 | AT4G19000.1 | 43.243 | 444 | 191 | 13 | 58 | 495 | 25 | 413 | 7.48e-90 | 281 |
Find 168 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAGGATTTGGTTGATAAA+TGG | 0.185509 | 5_4:+16730407 | Msa0840900:CDS |
| ATCCCTGCAGCTTTAGTTGC+TGG | 0.233171 | 5_4:-16730894 | None:intergenic |
| TTTAATGAAAGTTTGGATTC+TGG | 0.246432 | 5_4:+16732654 | Msa0840900:three_prime_UTR |
| TAGTCAAACTTAAAAGTATT+TGG | 0.252291 | 5_4:-16732321 | None:intergenic |
| AGAAGGAGAAGAGGCTGAAA+GGG | 0.278023 | 5_4:+16728382 | Msa0840900:CDS |
| AAAGGGAAGGAAGGTGGGTC+TGG | 0.285737 | 5_4:+16728357 | Msa0840900:CDS |
| TCATCAATTTAATGAAAGTT+TGG | 0.291836 | 5_4:+16732647 | Msa0840900:three_prime_UTR |
| TGAAAATTGTGTTGTGAATT+GGG | 0.294043 | 5_4:-16727935 | None:intergenic |
| AAATCCAAAGGTGTGGCTTC+TGG | 0.295709 | 5_4:-16731085 | None:intergenic |
| ATGAAGAAATCAATGTAAAT+AGG | 0.314425 | 5_4:+16730377 | Msa0840900:CDS |
| TTGAAAATTGTGTTGTGAAT+TGG | 0.316384 | 5_4:-16727936 | None:intergenic |
| GGAAAGGGTGGGTCTAAATT+TGG | 0.328323 | 5_4:+16728417 | Msa0840900:CDS |
| TTTGGATTCTGGACACAAAT+TGG | 0.328943 | 5_4:+16732665 | Msa0840900:three_prime_UTR |
| GAAGGGAGGAAGCGGAAGAA+AGG | 0.345922 | 5_4:+16728339 | Msa0840900:CDS |
| GCTGTCCGTATGTTGATATT+TGG | 0.349835 | 5_4:-16730044 | None:intergenic |
| TAGGAGATTAGCCAAGGATT+TGG | 0.358266 | 5_4:+16730396 | Msa0840900:CDS |
| GCTCGTGCTCTGATTTCATC+GGG | 0.361338 | 5_4:-16731136 | None:intergenic |
| GGTCCGGAGAGTCGTCTTCC+AGG | 0.365768 | 5_4:+16731047 | Msa0840900:CDS |
| TTGACTAATACTGGATAGAT+TGG | 0.366673 | 5_4:+16732337 | Msa0840900:three_prime_UTR |
| CAAGGATTTGGTTGATAAAT+GGG | 0.367845 | 5_4:+16730408 | Msa0840900:CDS |
| GGAAGGTGGGTCTGGGAAGA+AGG | 0.369572 | 5_4:+16728365 | Msa0840900:CDS |
| AAGAGACGGTGATCTTGATT+TGG | 0.370436 | 5_4:+16730923 | Msa0840900:CDS |
| TAATGAAGGTGCCAGGAATA+TGG | 0.373132 | 5_4:+16729276 | Msa0840900:CDS |
| GACGAATCGTTGTCGTAAAC+CGG | 0.375541 | 5_4:-16728216 | None:intergenic |
| ATCATCTTCCTCACCTTCCT+CGG | 0.381229 | 5_4:-16729650 | None:intergenic |
| AAGGGAAGGAAGGTGGGTCT+GGG | 0.392644 | 5_4:+16728358 | Msa0840900:CDS |
| AATGGCGCTGCCACCGGAGC+TGG | 0.393163 | 5_4:+16728293 | Msa0840900:CDS |
| ACCGGAGCTGGAAGATGAAT+TGG | 0.398311 | 5_4:+16728305 | Msa0840900:CDS |
| GCGCATTATACCAAGCTTGC+TGG | 0.398598 | 5_4:-16732365 | None:intergenic |
| TGCTCGTGCTCTGATTTCAT+CGG | 0.401921 | 5_4:-16731137 | None:intergenic |
| TCATAATGCTCTAGATCTAT+AGG | 0.403177 | 5_4:-16730181 | None:intergenic |
| TGGCCTTGATGCATGTTGCC+TGG | 0.404163 | 5_4:-16731065 | None:intergenic |
| GAGATGTGGGATGCACTTGC+TGG | 0.404558 | 5_4:+16728498 | Msa0840900:CDS |
| AAGAGGATGCTGAGCTTAAT+CGG | 0.405962 | 5_4:+16729785 | Msa0840900:CDS |
| TGCGAAATACTGAGGATGAT+AGG | 0.410044 | 5_4:+16730744 | Msa0840900:CDS |
| GTTATCATCATCCATATTCC+TGG | 0.415889 | 5_4:-16729287 | None:intergenic |
| AGAGGGGTTGGTGGGAAAAG+TGG | 0.424017 | 5_4:+16728450 | Msa0840900:CDS |
| AAGGCCAGAAGCCACACCTT+TGG | 0.425652 | 5_4:+16731081 | Msa0840900:CDS |
| AAGGGAGGAAGCGGAAGAAA+GGG | 0.426415 | 5_4:+16728340 | Msa0840900:CDS |
| AGGAAGATGAAGGGAGGAAG+CGG | 0.427861 | 5_4:+16728331 | Msa0840900:CDS |
| AGGATGATAGGGTTCCTTAC+AGG | 0.430195 | 5_4:+16730756 | Msa0840900:CDS |
| AAGAAGGAGAAGAGGCTGAA+AGG | 0.431465 | 5_4:+16728381 | Msa0840900:CDS |
| CGTAAACCGGTGTCTGTGAC+CGG | 0.433384 | 5_4:-16728203 | None:intergenic |
| CCATTTATCAACCAAATCCT+TGG | 0.433652 | 5_4:-16730407 | None:intergenic |
| GGTGGTTCTAAGAGAGGGGT+TGG | 0.434042 | 5_4:+16728438 | Msa0840900:CDS |
| TCATAGTGATTGAAATTTGA+TGG | 0.434353 | 5_4:+16732477 | Msa0840900:three_prime_UTR |
| TTCTTAATCAAGCGTTTCCT+CGG | 0.434552 | 5_4:-16728249 | None:intergenic |
| TGCTAAATTTATTGAAGAGT+TGG | 0.438820 | 5_4:+16729994 | Msa0840900:CDS |
| GGAGTAGAACCTGCTTTGTA+TGG | 0.441599 | 5_4:+16729325 | Msa0840900:CDS |
| TTAACCGATGGCCTCCTGTA+AGG | 0.442423 | 5_4:-16730770 | None:intergenic |
| TACGATGAACCGCGTTCTCC+TGG | 0.446496 | 5_4:+16729349 | Msa0840900:CDS |
| CAGCTGAAGAGAAGTGGTCT+TGG | 0.447062 | 5_4:+16730214 | Msa0840900:CDS |
| TCAGTACAACAATTCACGTC+AGG | 0.451557 | 5_4:-16732391 | None:intergenic |
| AAGCGGAAGAAAGGGAAGGA+AGG | 0.452307 | 5_4:+16728348 | Msa0840900:CDS |
| TTTATTAGTTGAGAATGTTA+TGG | 0.452902 | 5_4:+16729741 | Msa0840900:CDS |
| GGTAGTAGTAGTGGAAAGGG+TGG | 0.455568 | 5_4:+16728405 | Msa0840900:CDS |
| AAGTAAAGCCACAGTACATT+GGG | 0.459267 | 5_4:+16732559 | Msa0840900:three_prime_UTR |
| TTCTCCTGGCGATGCTCCAC+AGG | 0.459789 | 5_4:+16729363 | Msa0840900:CDS |
| TCATGCATACAAAATGAATA+CGG | 0.466553 | 5_4:-16732529 | None:intergenic |
| ATTTACATTGATTTCTTCAT+CGG | 0.467117 | 5_4:-16730374 | None:intergenic |
| GAGGGGTTGGTGGGAAAAGT+GGG | 0.469594 | 5_4:+16728451 | Msa0840900:CDS |
| TGCCAGAGGAGATTCGCATC+AGG | 0.469831 | 5_4:-16732448 | None:intergenic |
| TCCAATTCATCTTCCAGCTC+CGG | 0.470206 | 5_4:-16728306 | None:intergenic |
| TGAAGACGGTGAACCGTTGA+TGG | 0.474457 | 5_4:+16728083 | Msa0840900:CDS |
| TAAGAAATTGCAGCAGTTGA+GGG | 0.478322 | 5_4:+16732241 | Msa0840900:CDS |
| ATTGGTTTGTCCAGCAAGCT+TGG | 0.480885 | 5_4:+16732355 | Msa0840900:three_prime_UTR |
| GCCCTGATGCGAATCTCCTC+TGG | 0.481389 | 5_4:+16732446 | Msa0840900:three_prime_UTR |
| TCGAAATCGTCGAGTTGTTG+TGG | 0.481542 | 5_4:-16728147 | None:intergenic |
| TATTTATAAGAACTAGGATC+GGG | 0.481575 | 5_4:-16727900 | None:intergenic |
| CGAGTACTCTTGTTAAATAT+AGG | 0.484882 | 5_4:-16730710 | None:intergenic |
| ACTAATAAAGCAATTTCTGC+AGG | 0.487697 | 5_4:-16729727 | None:intergenic |
| TCGTCGAGTTGTTGTGGCTC+CGG | 0.492659 | 5_4:-16728141 | None:intergenic |
| TTCTTGAGTTTATTGACTGC+GGG | 0.495936 | 5_4:-16729817 | None:intergenic |
| AGGCCAGCAACTAAAGCTGC+AGG | 0.496201 | 5_4:+16730891 | Msa0840900:intron |
| GAAGGAGAAGAGGCTGAAAG+GGG | 0.497568 | 5_4:+16728383 | Msa0840900:CDS |
| TGAGGAAGATGATGAAATCA+AGG | 0.503820 | 5_4:+16729660 | Msa0840900:CDS |
| GGTTCTAAGAGAGGGGTTGG+TGG | 0.507545 | 5_4:+16728441 | Msa0840900:CDS |
| GTTCTAAGAGAGGGGTTGGT+GGG | 0.509279 | 5_4:+16728442 | Msa0840900:CDS |
| TTGTAATGCAGGCCTAGGTC+CGG | 0.510730 | 5_4:+16731031 | Msa0840900:intron |
| TGGCTTGAGCCACTTCCTGA+TGG | 0.511317 | 5_4:+16730014 | Msa0840900:CDS |
| CGGAAGAAAGGGAAGGAAGG+TGG | 0.513410 | 5_4:+16728351 | Msa0840900:CDS |
| AGTTGAACATGATAGAATCT+TGG | 0.517157 | 5_4:+16732692 | Msa0840900:three_prime_UTR |
| ATCTGACGGCGAAGGATCAC+CGG | 0.517604 | 5_4:+16728122 | Msa0840900:CDS |
| GTGAATTATTTATAAGAACT+AGG | 0.518561 | 5_4:-16727906 | None:intergenic |
| GCGAAATACTGAGGATGATA+GGG | 0.519731 | 5_4:+16730745 | Msa0840900:CDS |
| CATAGTGATTGAAATTTGAT+GGG | 0.520728 | 5_4:+16732478 | Msa0840900:three_prime_UTR |
| TTAACCTGTGGAGCATCGCC+AGG | 0.521049 | 5_4:-16729367 | None:intergenic |
| ACAGTCAATGGCGCTGCCAC+CGG | 0.522918 | 5_4:+16728287 | Msa0840900:CDS |
| TTGATTAAGAAAAGTGATAC+CGG | 0.525069 | 5_4:+16728261 | Msa0840900:CDS |
| GAAAATTGTGTTGTGAATTG+GGG | 0.525301 | 5_4:-16727934 | None:intergenic |
| AAAGTAAAGCCACAGTACAT+TGG | 0.528148 | 5_4:+16732558 | Msa0840900:three_prime_UTR |
| GGCAGACTTCCATCAGGAAG+TGG | 0.528403 | 5_4:-16730023 | None:intergenic |
| TTGCCTGGAAGACGACTCTC+CGG | 0.529281 | 5_4:-16731050 | None:intergenic |
| TTTGTGCGTGAATGGAAGAA+AGG | 0.530968 | 5_4:-16727875 | None:intergenic |
| CGGATTGTCTTCGTAACCCA+TGG | 0.532356 | 5_4:-16727963 | None:intergenic |
| TTATTTATAAGAACTAGGAT+CGG | 0.534734 | 5_4:-16727901 | None:intergenic |
| GTCATTTACTAGGCCGAGGA+AGG | 0.534804 | 5_4:+16729637 | Msa0840900:intron |
| AATTGGAGGAGGAAGATGAA+GGG | 0.534814 | 5_4:+16728322 | Msa0840900:CDS |
| GAATTGGAGGAGGAAGATGA+AGG | 0.537209 | 5_4:+16728321 | Msa0840900:CDS |
| AATTTGGTGGTTCTAAGAGA+GGG | 0.537655 | 5_4:+16728433 | Msa0840900:CDS |
| AATCATCAGCTTACTTTGAG+AGG | 0.539854 | 5_4:-16729861 | None:intergenic |
| ATATTTGGCAGACTTCCATC+AGG | 0.539886 | 5_4:-16730029 | None:intergenic |
| CACCTACCTTCATACGATGC+TGG | 0.541202 | 5_4:-16731177 | None:intergenic |
| ATAAGAAATTGCAGCAGTTG+AGG | 0.546540 | 5_4:+16732240 | Msa0840900:CDS |
| CTATATTTAACAAGAGTACT+CGG | 0.547668 | 5_4:+16730711 | Msa0840900:CDS |
| GAGGAAGCGGAAGAAAGGGA+AGG | 0.547980 | 5_4:+16728344 | Msa0840900:CDS |
| CATGCATACAAAATGAATAC+GGG | 0.550188 | 5_4:-16732528 | None:intergenic |
| GGAGCTGGAAGATGAATTGG+AGG | 0.551704 | 5_4:+16728308 | Msa0840900:CDS |
| AGGATGATAATGAAGGTGCC+AGG | 0.553447 | 5_4:+16729269 | Msa0840900:intron |
| CTTCTTGAGTTTATTGACTG+CGG | 0.558309 | 5_4:-16729818 | None:intergenic |
| TGATACCGGAAAACAGTCAA+TGG | 0.558638 | 5_4:+16728275 | Msa0840900:CDS |
| GGAAGAAAGGGAAGGAAGGT+GGG | 0.559866 | 5_4:+16728352 | Msa0840900:CDS |
| AGAGAACAGCTGAAGAGAAG+TGG | 0.564504 | 5_4:+16730208 | Msa0840900:CDS |
| GAGTGTCGAAGGTCGTGGTA+TGG | 0.565291 | 5_4:+16732298 | Msa0840900:CDS |
| AGGTGAAGTTAATGAGATGT+GGG | 0.565360 | 5_4:+16728485 | Msa0840900:CDS |
| GCTTGAGGTTACAGCAGAAG+AGG | 0.568395 | 5_4:+16729768 | Msa0840900:CDS |
| TACTCTTGTTAAATATAGGT+CGG | 0.568735 | 5_4:-16730706 | None:intergenic |
| CTTCCAGGCAACATGCATCA+AGG | 0.569461 | 5_4:+16731062 | Msa0840900:CDS |
| AAGAAAGGTTGTGAAGAAGA+AGG | 0.572755 | 5_4:-16727860 | None:intergenic |
| TGGAGGAGGAAGATGAAGGG+AGG | 0.576145 | 5_4:+16728325 | Msa0840900:CDS |
| AAGGAGAAGAGGCTGAAAGG+GGG | 0.577876 | 5_4:+16728384 | Msa0840900:CDS |
| GTCTGCCAAATATCAACATA+CGG | 0.578071 | 5_4:+16730039 | Msa0840900:CDS |
| AATTCATCTTCCAGCTCCGG+TGG | 0.578459 | 5_4:-16728303 | None:intergenic |
| GTCATCAAGGATGATAATGA+AGG | 0.578740 | 5_4:+16729262 | Msa0840900:intron |
| AAATTTGGTGGTTCTAAGAG+AGG | 0.579251 | 5_4:+16728432 | Msa0840900:CDS |
| GAGAGGACTTCTATAAGAAG+AGG | 0.579982 | 5_4:-16729844 | None:intergenic |
| TTTAGGTATCGTGATGAAGA+CGG | 0.580572 | 5_4:+16728069 | Msa0840900:intron |
| GCCAGAGGAGATTCGCATCA+GGG | 0.580996 | 5_4:-16732447 | None:intergenic |
| GTAAACCGGTGTCTGTGACC+GGG | 0.582959 | 5_4:-16728202 | None:intergenic |
| ACAAGACCAGCATCGTATGA+AGG | 0.585240 | 5_4:+16731171 | Msa0840900:CDS |
| GAAGAGAAGTGGTCTTGGAA+AGG | 0.592321 | 5_4:+16730219 | Msa0840900:CDS |
| GCTGGAAGATGAATTGGAGG+AGG | 0.598340 | 5_4:+16728311 | Msa0840900:CDS |
| GAATGTTATGGCTGAGCTTG+AGG | 0.598789 | 5_4:+16729753 | Msa0840900:CDS |
| ATTTGGTGGTTCTAAGAGAG+GGG | 0.606119 | 5_4:+16728434 | Msa0840900:CDS |
| TCATCGTAACCATACAAAGC+AGG | 0.606767 | 5_4:-16729334 | None:intergenic |
| TGTAAATAGGAGATTAGCCA+AGG | 0.607197 | 5_4:+16730390 | Msa0840900:CDS |
| GCTACAAAACTGAGTGTCGA+AGG | 0.607526 | 5_4:+16732287 | Msa0840900:CDS |
| GAAGACGACTCTCCGGACCT+AGG | 0.607941 | 5_4:-16731043 | None:intergenic |
| AAGGTGAAGTTAATGAGATG+TGG | 0.610064 | 5_4:+16728484 | Msa0840900:CDS |
| ATACAAAATGAATACGGGAC+AGG | 0.612147 | 5_4:-16732523 | None:intergenic |
| GGTTCCTTACAGGAGGCCAT+CGG | 0.612819 | 5_4:+16730766 | Msa0840900:CDS |
| AAGGGTGGGTCTAAATTTGG+TGG | 0.617169 | 5_4:+16728420 | Msa0840900:CDS |
| TCGTGCCCGGTCACAGACAC+CGG | 0.620079 | 5_4:+16728197 | Msa0840900:CDS |
| GATAACTTTATAGACGACAC+TGG | 0.622093 | 5_4:+16729304 | Msa0840900:CDS |
| CAGTACAACAATTCACGTCA+GGG | 0.623699 | 5_4:-16732390 | None:intergenic |
| TTACTAGGCCGAGGAAGGTG+AGG | 0.625192 | 5_4:+16729642 | Msa0840900:intron |
| GACGTACAATCTGACGGCGA+AGG | 0.631690 | 5_4:+16728114 | Msa0840900:CDS |
| CTCGTGCTCTGATTTCATCG+GGG | 0.632880 | 5_4:-16731135 | None:intergenic |
| TGCACTTGCTGGAAATTCTG+AGG | 0.634543 | 5_4:+16728509 | Msa0840900:CDS |
| AAACTGAGTGTCGAAGGTCG+TGG | 0.635870 | 5_4:+16732293 | Msa0840900:CDS |
| GTAGTAGTAGTGGAAAGGGT+GGG | 0.636679 | 5_4:+16728406 | Msa0840900:CDS |
| TACGACGACGTACAATCTGA+CGG | 0.643630 | 5_4:+16728108 | Msa0840900:CDS |
| GGTCTGGGAAGAAGGAGAAG+AGG | 0.645533 | 5_4:+16728373 | Msa0840900:CDS |
| ATGATAGGGTTCCTTACAGG+AGG | 0.648469 | 5_4:+16730759 | Msa0840900:CDS |
| ATTCGTCGAAATCAAAGCCG+AGG | 0.649525 | 5_4:+16728232 | Msa0840900:CDS |
| GGCCAGCAACTAAAGCTGCA+GGG | 0.650244 | 5_4:+16730892 | Msa0840900:intron |
| GGAGCATCGCCAGGAGAACG+CGG | 0.650507 | 5_4:-16729358 | None:intergenic |
| GCAGGGATGCAATCAAGAGA+CGG | 0.653217 | 5_4:+16730909 | Msa0840900:CDS |
| TGAAGACATGCGAAATACTG+AGG | 0.655646 | 5_4:+16730736 | Msa0840900:CDS |
| GATCACAAAATCCAAAGGTG+TGG | 0.655821 | 5_4:-16731092 | None:intergenic |
| ATAGTGATTGAAATTTGATG+GGG | 0.659440 | 5_4:+16732479 | Msa0840900:three_prime_UTR |
| ATTGTCTTCGTAACCCATGG+TGG | 0.661409 | 5_4:-16727960 | None:intergenic |
| GGACGGATCACAAAATCCAA+AGG | 0.667839 | 5_4:-16731097 | None:intergenic |
| AATAATGGCCCAATGTACTG+TGG | 0.667989 | 5_4:-16732567 | None:intergenic |
| CACTATGACATAGATGCCAG+AGG | 0.674536 | 5_4:-16732462 | None:intergenic |
| TAGTGATTGAAATTTGATGG+GGG | 0.683627 | 5_4:+16732480 | Msa0840900:three_prime_UTR |
| ACGTCGTCGTAATCCATCAA+CGG | 0.684522 | 5_4:-16728096 | None:intergenic |
| AAAAGTGGGAATGATCGTGA+AGG | 0.734592 | 5_4:+16728465 | Msa0840900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCTTACTAAAAATTAA+GGG | - | chr5_4:16729402-16729421 | None:intergenic | 10.0% |
| !! | AAAAATCTTACTAAAAATTA+AGG | - | chr5_4:16729403-16729422 | None:intergenic | 10.0% |
| !!! | AATTCAATTTCGATTTTTTT+AGG | + | chr5_4:16728052-16728071 | Msa0840900:intron | 15.0% |
| !! | ATTAAAATTGAATGATGAAA+AGG | - | chr5_4:16728557-16728576 | None:intergenic | 15.0% |
| !!! | TGAAAAGTATTGTTAAAATA+AGG | - | chr5_4:16729924-16729943 | None:intergenic | 15.0% |
| !! | TAAATTTATAATTGTAATGC+AGG | + | chr5_4:16731020-16731039 | Msa0840900:intron | 15.0% |
| !! | AAAAAAAAAAGGATGTAAAA+GGG | - | chr5_4:16731228-16731247 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAGGATGTAAA+AGG | - | chr5_4:16731229-16731248 | None:intergenic | 15.0% |
| !!! | TTTTACATCCTTTTTTTTTT+TGG | + | chr5_4:16731228-16731247 | Msa0840900:intron | 15.0% |
| !!! | TTTACATCCTTTTTTTTTTT+GGG | + | chr5_4:16731229-16731248 | Msa0840900:intron | 15.0% |
| !! | AAACTATATAATCAAACATA+TGG | - | chr5_4:16731508-16731527 | None:intergenic | 15.0% |
| !! | AACTATATATAGTTAAGTAT+AGG | + | chr5_4:16731980-16731999 | Msa0840900:intron | 15.0% |
| !! | AAACATAAAAACTCAAATAA+TGG | - | chr5_4:16732585-16732604 | None:intergenic | 15.0% |
| !! | TTATTTATAAGAACTAGGAT+CGG | - | chr5_4:16727904-16727923 | None:intergenic | 20.0% |
| !! | GTGAATTATTTATAAGAACT+AGG | - | chr5_4:16727909-16727928 | None:intergenic | 20.0% |
| !!! | TCTAGAATTTTTTCACTTTA+GGG | + | chr5_4:16728000-16728019 | Msa0840900:intron | 20.0% |
| !! | AAATTGTGTATTTAAGAGAT+GGG | + | chr5_4:16728664-16728683 | Msa0840900:intron | 20.0% |
| !! | AGAACTTATAAAAACAGATT+AGG | + | chr5_4:16728749-16728768 | Msa0840900:intron | 20.0% |
| !! | TCTTGTATGAAATCATTTAT+AGG | + | chr5_4:16729568-16729587 | Msa0840900:intron | 20.0% |
| !! | TTTATTAGTTGAGAATGTTA+TGG | + | chr5_4:16729741-16729760 | Msa0840900:CDS | 20.0% |
| !! | TTGATAAAAACATAATAACC+TGG | - | chr5_4:16730351-16730370 | None:intergenic | 20.0% |
| !!! | AGGTTATTATGTTTTTATCA+AGG | + | chr5_4:16730350-16730369 | Msa0840900:intron | 20.0% |
| !!! | ATTTACATTGATTTCTTCAT+CGG | - | chr5_4:16730377-16730396 | None:intergenic | 20.0% |
| !! | ATGAAGAAATCAATGTAAAT+AGG | + | chr5_4:16730377-16730396 | Msa0840900:CDS | 20.0% |
| !!! | ATTTCTATTTTTGAATTGCT+TGG | + | chr5_4:16730808-16730827 | Msa0840900:intron | 20.0% |
| !! | TAAAGAACCCAAAAAAAAAA+AGG | - | chr5_4:16731239-16731258 | None:intergenic | 20.0% |
| !! | TTATTTATTGGCATAAAAAC+TGG | - | chr5_4:16731411-16731430 | None:intergenic | 20.0% |
| !! | ATAGTTTCATGAATAAAAGT+TGG | + | chr5_4:16731521-16731540 | Msa0840900:intron | 20.0% |
| !!! | CTTTTTTACATGTATGTTTT+GGG | + | chr5_4:16731597-16731616 | Msa0840900:intron | 20.0% |
| !! | AACAGATTATTATAGAACAA+TGG | - | chr5_4:16731813-16731832 | None:intergenic | 20.0% |
| !!! | TAGTCAAACTTAAAAGTATT+TGG | - | chr5_4:16732324-16732343 | None:intergenic | 20.0% |
| !! | TCATCAATTTAATGAAAGTT+TGG | + | chr5_4:16732647-16732666 | Msa0840900:three_prime_UTR | 20.0% |
| ! | TATTTATAAGAACTAGGATC+GGG | - | chr5_4:16727903-16727922 | None:intergenic | 25.0% |
| ! | TGAAAATTGTGTTGTGAATT+GGG | - | chr5_4:16727938-16727957 | None:intergenic | 25.0% |
| ! | TTGAAAATTGTGTTGTGAAT+TGG | - | chr5_4:16727939-16727958 | None:intergenic | 25.0% |
| !!! | CTCTAGAATTTTTTCACTTT+AGG | + | chr5_4:16727999-16728018 | Msa0840900:intron | 25.0% |
| ! | TTGATTAAGAAAAGTGATAC+CGG | + | chr5_4:16728261-16728280 | Msa0840900:CDS | 25.0% |
| ! | CAAATTGTGTATTTAAGAGA+TGG | + | chr5_4:16728663-16728682 | Msa0840900:intron | 25.0% |
| !! | ATTATGTTGTTTATCCAAAC+AGG | + | chr5_4:16728928-16728947 | Msa0840900:intron | 25.0% |
| !! | TTATGTTGTTTATCCAAACA+GGG | + | chr5_4:16728929-16728948 | Msa0840900:intron | 25.0% |
| ! | AAGAGCTTATATAAACAACT+TGG | - | chr5_4:16729001-16729020 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | chr5_4:16729046-16729065 | Msa0840900:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | + | chr5_4:16729047-16729066 | Msa0840900:intron | 25.0% |
| ! | TGACTAATAATGATCTATCA+GGG | - | chr5_4:16729144-16729163 | None:intergenic | 25.0% |
| ! | ATGACTAATAATGATCTATC+AGG | - | chr5_4:16729145-16729164 | None:intergenic | 25.0% |
| !! | TATTAGTCATGTCTTTTAGT+TGG | + | chr5_4:16729155-16729174 | Msa0840900:intron | 25.0% |
| !!! | ATTAGTCATGTCTTTTAGTT+GGG | + | chr5_4:16729156-16729175 | Msa0840900:intron | 25.0% |
| !!! | GTTTTTCTTTTTGTGTTGTT+TGG | + | chr5_4:16729186-16729205 | Msa0840900:intron | 25.0% |
| !!! | TGTTGTTTGGAGTAATATTT+TGG | + | chr5_4:16729199-16729218 | Msa0840900:intron | 25.0% |
| ! | CTGGAAAATGAAATATGTAA+TGG | + | chr5_4:16729493-16729512 | Msa0840900:intron | 25.0% |
| !!! | TATGTAATGGTTGTTTTTTG+AGG | + | chr5_4:16729506-16729525 | Msa0840900:intron | 25.0% |
| ! | TAAATGACATAATAGAGAGA+AGG | - | chr5_4:16729625-16729644 | None:intergenic | 25.0% |
| !! | TCTCTATTATGTCATTTACT+AGG | + | chr5_4:16729627-16729646 | Msa0840900:intron | 25.0% |
| ! | TGCTAAATTTATTGAAGAGT+TGG | + | chr5_4:16729994-16730013 | Msa0840900:CDS | 25.0% |
| ! | TTGCATCTAAATCATCATAA+TGG | - | chr5_4:16730106-16730125 | None:intergenic | 25.0% |
| ! | GATACAATGCTAAATAATCT+TGG | - | chr5_4:16730139-16730158 | None:intergenic | 25.0% |
| ! | TAACTGCATAACAAGAAATA+CGG | - | chr5_4:16730161-16730180 | None:intergenic | 25.0% |
| ! | TAAGAAAAACACGATAATGA+CGG | - | chr5_4:16730463-16730482 | None:intergenic | 25.0% |
| ! | TAAACACTGTATAAAGTGAA+GGG | - | chr5_4:16730505-16730524 | None:intergenic | 25.0% |
| ! | TTAAACACTGTATAAAGTGA+AGG | - | chr5_4:16730506-16730525 | None:intergenic | 25.0% |
| ! | TGCTTTACAATTACCTAAAA+TGG | + | chr5_4:16730586-16730605 | Msa0840900:intron | 25.0% |
| ! | TACTCTTGTTAAATATAGGT+CGG | - | chr5_4:16730709-16730728 | None:intergenic | 25.0% |
| !!! | CTATATTTAACAAGAGTACT+CGG | + | chr5_4:16730711-16730730 | Msa0840900:CDS | 25.0% |
| ! | TTTACTTATTGCATAGTAAC+AGG | + | chr5_4:16730837-16730856 | Msa0840900:intron | 25.0% |
| !! | TAGTTTTCTTGAACTTTTAC+AGG | + | chr5_4:16730871-16730890 | Msa0840900:intron | 25.0% |
| ! | CAATTATAAATTTACCATCC+CGG | - | chr5_4:16731014-16731033 | None:intergenic | 25.0% |
| !!! | GTAGGTGTTTTTTAAGTTTT+GGG | + | chr5_4:16731193-16731212 | Msa0840900:intron | 25.0% |
| !! | TTTTATGCCAATAAATAAGC+AGG | + | chr5_4:16731413-16731432 | Msa0840900:intron | 25.0% |
| ! | AAAGTTGGATGATTTAAACA+TGG | + | chr5_4:16731536-16731555 | Msa0840900:intron | 25.0% |
| ! | AAGTTGGATGATTTAAACAT+GGG | + | chr5_4:16731537-16731556 | Msa0840900:intron | 25.0% |
| ! | CCAAAACATACATGTAAAAA+AGG | - | chr5_4:16731599-16731618 | None:intergenic | 25.0% |
| !!! | CCTTTTTTACATGTATGTTT+TGG | + | chr5_4:16731596-16731615 | Msa0840900:intron | 25.0% |
| !!! | TTCTGATATTTTGGATAGAA+TGG | + | chr5_4:16731623-16731642 | Msa0840900:intron | 25.0% |
| !!! | TCTGATATTTTGGATAGAAT+GGG | + | chr5_4:16731624-16731643 | Msa0840900:intron | 25.0% |
| !!! | TTTTGGTTTAAATTTCAGCA+AGG | + | chr5_4:16731654-16731673 | Msa0840900:intron | 25.0% |
| ! | ACAACAAATAATATGCATAC+AGG | - | chr5_4:16731885-16731904 | None:intergenic | 25.0% |
| !! | CAGAAAGATTTAGAATTTCA+AGG | - | chr5_4:16732096-16732115 | None:intergenic | 25.0% |
| !!! | CTTTTAAGTTTGACTAATAC+TGG | + | chr5_4:16732328-16732347 | Msa0840900:exon | 25.0% |
| ! | TCATAGTGATTGAAATTTGA+TGG | + | chr5_4:16732477-16732496 | Msa0840900:three_prime_UTR | 25.0% |
| ! | CATAGTGATTGAAATTTGAT+GGG | + | chr5_4:16732478-16732497 | Msa0840900:three_prime_UTR | 25.0% |
| ! | ATAGTGATTGAAATTTGATG+GGG | + | chr5_4:16732479-16732498 | Msa0840900:three_prime_UTR | 25.0% |
| ! | TCATGCATACAAAATGAATA+CGG | - | chr5_4:16732532-16732551 | None:intergenic | 25.0% |
| ! | TTTAATGAAAGTTTGGATTC+TGG | + | chr5_4:16732654-16732673 | Msa0840900:three_prime_UTR | 25.0% |
| GAAAATTGTGTTGTGAATTG+GGG | - | chr5_4:16727937-16727956 | None:intergenic | 30.0% | |
| !! | TAAACACTTCTGAGATAGTT+TGG | + | chr5_4:16728725-16728744 | Msa0840900:intron | 30.0% |
| !! | AAACACTTCTGAGATAGTTT+GGG | + | chr5_4:16728726-16728745 | Msa0840900:intron | 30.0% |
| TCTCTATGATGTGTACTTTA+TGG | + | chr5_4:16729101-16729120 | Msa0840900:intron | 30.0% | |
| !! | TTAGTCATGTCTTTTAGTTG+GGG | + | chr5_4:16729157-16729176 | Msa0840900:intron | 30.0% |
| ! | CTGATTTGAAGAACTTGAAA+TGG | - | chr5_4:16729463-16729482 | None:intergenic | 30.0% |
| !!! | TTTTTGAGGTCAAACTTTCT+CGG | + | chr5_4:16729520-16729539 | Msa0840900:intron | 30.0% |
| !! | AATCAAGGATCTTTTCAAGA+TGG | + | chr5_4:16729675-16729694 | Msa0840900:CDS | 30.0% |
| !! | ATCAAGGATCTTTTCAAGAT+GGG | + | chr5_4:16729676-16729695 | Msa0840900:CDS | 30.0% |
| ACTAATAAAGCAATTTCTGC+AGG | - | chr5_4:16729730-16729749 | None:intergenic | 30.0% | |
| ! | CTTTTCACATACTATTTCAC+AGG | + | chr5_4:16729937-16729956 | Msa0840900:intron | 30.0% |
| ! | TCATAATGCTCTAGATCTAT+AGG | - | chr5_4:16730184-16730203 | None:intergenic | 30.0% |
| ATGTGAACAAAACAACGATA+GGG | + | chr5_4:16730258-16730277 | Msa0840900:intron | 30.0% | |
| !! | GTCTAAATGTGGTTTGTTAT+TGG | + | chr5_4:16730283-16730302 | Msa0840900:intron | 30.0% |
| !! | TGTGGTTTGTTATTGGAATT+TGG | + | chr5_4:16730290-16730309 | Msa0840900:intron | 30.0% |
| GGAATTTGGAAGTAATATAC+TGG | + | chr5_4:16730304-16730323 | Msa0840900:intron | 30.0% | |
| !! | GATATTTTCATTGTTTTGCC+AGG | + | chr5_4:16730330-16730349 | Msa0840900:intron | 30.0% |
| !! | CAAGGATTTGGTTGATAAAT+GGG | + | chr5_4:16730408-16730427 | Msa0840900:CDS | 30.0% |
| AAATGCTAGAGAAGAAAACT+CGG | + | chr5_4:16730524-16730543 | Msa0840900:intron | 30.0% | |
| ! | GTTTTCTTTGTGTTGTGTTT+TGG | + | chr5_4:16730552-16730571 | Msa0840900:intron | 30.0% |
| ACTAATAATGAACTCGTGAA+AGG | - | chr5_4:16730646-16730665 | None:intergenic | 30.0% | |
| CGAGTACTCTTGTTAAATAT+AGG | - | chr5_4:16730713-16730732 | None:intergenic | 30.0% | |
| ! | TTGTTGTTCAGTTTCACTTA+AGG | + | chr5_4:16730983-16731002 | Msa0840900:intron | 30.0% |
| !!! | GGTAGGTGTTTTTTAAGTTT+TGG | + | chr5_4:16731192-16731211 | Msa0840900:intron | 30.0% |
| !! | TTTGAAGTTTAGTTTGTGTG+CGG | + | chr5_4:16731341-16731360 | Msa0840900:intron | 30.0% |
| ATGATTTAAACATGGGATAC+TGG | + | chr5_4:16731544-16731563 | Msa0840900:intron | 30.0% | |
| !! | TTTGGGTGTTTCTGATATTT+TGG | + | chr5_4:16731614-16731633 | Msa0840900:intron | 30.0% |
| AAACATGATATCCACAAGTT+GGG | - | chr5_4:16731719-16731738 | None:intergenic | 30.0% | |
| AAAACATGATATCCACAAGT+TGG | - | chr5_4:16731720-16731739 | None:intergenic | 30.0% | |
| GAAGAAAAAAAACAACAGCA+TGG | - | chr5_4:16731863-16731882 | None:intergenic | 30.0% | |
| TTAGTAGAATTTGACCAATG+TGG | + | chr5_4:16732199-16732218 | Msa0840900:intron | 30.0% | |
| TTGACTAATACTGGATAGAT+TGG | + | chr5_4:16732337-16732356 | Msa0840900:three_prime_UTR | 30.0% | |
| TAGTGATTGAAATTTGATGG+GGG | + | chr5_4:16732480-16732499 | Msa0840900:three_prime_UTR | 30.0% | |
| CATGCATACAAAATGAATAC+GGG | - | chr5_4:16732531-16732550 | None:intergenic | 30.0% | |
| AGTTGAACATGATAGAATCT+TGG | + | chr5_4:16732692-16732711 | Msa0840900:three_prime_UTR | 30.0% | |
| AAGAAAGGTTGTGAAGAAGA+AGG | - | chr5_4:16727863-16727882 | None:intergenic | 35.0% | |
| ! | ACACAATTTTCAATCCACCA+TGG | + | chr5_4:16727946-16727965 | Msa0840900:exon | 35.0% |
| ! | CACAATTTTCAATCCACCAT+GGG | + | chr5_4:16727947-16727966 | Msa0840900:exon | 35.0% |
| TCTAGAGAGAGAGAAACTTA+CGG | - | chr5_4:16727986-16728005 | None:intergenic | 35.0% | |
| ! | TTTAGGTATCGTGATGAAGA+CGG | + | chr5_4:16728069-16728088 | Msa0840900:intron | 35.0% |
| TTCTTAATCAAGCGTTTCCT+CGG | - | chr5_4:16728252-16728271 | None:intergenic | 35.0% | |
| !! | AAATTTGGTGGTTCTAAGAG+AGG | + | chr5_4:16728432-16728451 | Msa0840900:CDS | 35.0% |
| !! | AATTTGGTGGTTCTAAGAGA+GGG | + | chr5_4:16728433-16728452 | Msa0840900:CDS | 35.0% |
| AAGGTGAAGTTAATGAGATG+TGG | + | chr5_4:16728484-16728503 | Msa0840900:CDS | 35.0% | |
| AGGTGAAGTTAATGAGATGT+GGG | + | chr5_4:16728485-16728504 | Msa0840900:CDS | 35.0% | |
| ! | CTGAGGTACATTTGTGATTT+TGG | + | chr5_4:16728526-16728545 | Msa0840900:intron | 35.0% |
| ATTTAAGAGATGGGTCTGTT+TGG | + | chr5_4:16728673-16728692 | Msa0840900:intron | 35.0% | |
| !! | TCTGTTTGGATTGGCTTATT+TGG | + | chr5_4:16728687-16728706 | Msa0840900:intron | 35.0% |
| !! | CTGTTTGGATTGGCTTATTT+GGG | + | chr5_4:16728688-16728707 | Msa0840900:intron | 35.0% |
| !! | TATCTCAGAAGTGTTTATGC+CGG | - | chr5_4:16728722-16728741 | None:intergenic | 35.0% |
| ! | GGTCTTATGTATGAGAATAG+TGG | + | chr5_4:16728950-16728969 | Msa0840900:intron | 35.0% |
| ! | GGTCTTATGTATGAGAATAG+TGG | + | chr5_4:16728950-16728969 | Msa0840900:intron | 35.0% |
| AATGATCTATCAGGGTAGAA+AGG | - | chr5_4:16729136-16729155 | None:intergenic | 35.0% | |
| ! | GTCATCAAGGATGATAATGA+AGG | + | chr5_4:16729262-16729281 | Msa0840900:intron | 35.0% |
| GTTATCATCATCCATATTCC+TGG | - | chr5_4:16729290-16729309 | None:intergenic | 35.0% | |
| GATAACTTTATAGACGACAC+TGG | + | chr5_4:16729304-16729323 | Msa0840900:CDS | 35.0% | |
| GGGAATAAATCATTAACCTG+TGG | - | chr5_4:16729382-16729401 | None:intergenic | 35.0% | |
| TGAGGAAGATGATGAAATCA+AGG | + | chr5_4:16729660-16729679 | Msa0840900:CDS | 35.0% | |
| !! | TCAAGGATCTTTTCAAGATG+GGG | + | chr5_4:16729677-16729696 | Msa0840900:CDS | 35.0% |
| ! | TTCTTGAGTTTATTGACTGC+GGG | - | chr5_4:16729820-16729839 | None:intergenic | 35.0% |
| ! | CTTCTTGAGTTTATTGACTG+CGG | - | chr5_4:16729821-16729840 | None:intergenic | 35.0% |
| AATCATCAGCTTACTTTGAG+AGG | - | chr5_4:16729864-16729883 | None:intergenic | 35.0% | |
| TAACAACAGTCTAATGTAGC+AGG | - | chr5_4:16729888-16729907 | None:intergenic | 35.0% | |
| GCTACATTAGACTGTTGTTA+TGG | + | chr5_4:16729888-16729907 | Msa0840900:intron | 35.0% | |
| !! | CAGCTAGAGTTTTTAGATCA+CGG | + | chr5_4:16729969-16729988 | Msa0840900:CDS | 35.0% |
| GTCTGCCAAATATCAACATA+CGG | + | chr5_4:16730039-16730058 | Msa0840900:CDS | 35.0% | |
| GATGTGAACAAAACAACGAT+AGG | + | chr5_4:16730257-16730276 | Msa0840900:intron | 35.0% | |
| TGTGAACAAAACAACGATAG+GGG | + | chr5_4:16730259-16730278 | Msa0840900:intron | 35.0% | |
| ! | TGTAAATAGGAGATTAGCCA+AGG | + | chr5_4:16730390-16730409 | Msa0840900:CDS | 35.0% |
| CCATTTATCAACCAAATCCT+TGG | - | chr5_4:16730410-16730429 | None:intergenic | 35.0% | |
| !! | CCAAGGATTTGGTTGATAAA+TGG | + | chr5_4:16730407-16730426 | Msa0840900:CDS | 35.0% |
| AATGCTAGAGAAGAAAACTC+GGG | + | chr5_4:16730525-16730544 | Msa0840900:intron | 35.0% | |
| CTTATTGCATAGTAACAGGT+TGG | + | chr5_4:16730841-16730860 | Msa0840900:intron | 35.0% | |
| GATTTGGATCTTTCACAGTA+AGG | + | chr5_4:16730939-16730958 | Msa0840900:intron | 35.0% | |
| AGTTTCACTTAAGGAATCAC+CGG | + | chr5_4:16730992-16731011 | Msa0840900:intron | 35.0% | |
| TATAATTGTAATGCAGGCCT+AGG | + | chr5_4:16731026-16731045 | Msa0840900:intron | 35.0% | |
| ! | ATCGGGGTCAATTTTAGATT+GGG | - | chr5_4:16731122-16731141 | None:intergenic | 35.0% |
| ATTTGCTTGTCATTGGAAGT+TGG | - | chr5_4:16731318-16731337 | None:intergenic | 35.0% | |
| ! | CAAAGGAATTTGCTTGTCAT+TGG | - | chr5_4:16731325-16731344 | None:intergenic | 35.0% |
| GCACACAAACTAAACTTCAA+AGG | - | chr5_4:16731342-16731361 | None:intergenic | 35.0% | |
| CAAACATATGGCATGTGATA+TGG | - | chr5_4:16731496-16731515 | None:intergenic | 35.0% | |
| !! | AAGGCATTGAGCATTGTTAT+TGG | - | chr5_4:16731580-16731599 | None:intergenic | 35.0% |
| !! | ATTTTGGATAGAATGGGTTC+TGG | + | chr5_4:16731630-16731649 | Msa0840900:intron | 35.0% |
| AAATCTCTGTGATCTCCATA+TGG | + | chr5_4:16731747-16731766 | Msa0840900:intron | 35.0% | |
| ATAAGAAATTGCAGCAGTTG+AGG | + | chr5_4:16732240-16732259 | Msa0840900:CDS | 35.0% | |
| TAAGAAATTGCAGCAGTTGA+GGG | + | chr5_4:16732241-16732260 | Msa0840900:CDS | 35.0% | |
| ATACAAAATGAATACGGGAC+AGG | - | chr5_4:16732526-16732545 | None:intergenic | 35.0% | |
| AAAGTAAAGCCACAGTACAT+TGG | + | chr5_4:16732558-16732577 | Msa0840900:three_prime_UTR | 35.0% | |
| AAGTAAAGCCACAGTACATT+GGG | + | chr5_4:16732559-16732578 | Msa0840900:three_prime_UTR | 35.0% | |
| TTTGGATTCTGGACACAAAT+TGG | + | chr5_4:16732665-16732684 | Msa0840900:three_prime_UTR | 35.0% | |
| TTTGTGCGTGAATGGAAGAA+AGG | - | chr5_4:16727878-16727897 | None:intergenic | 40.0% | |
| ! | ACAATTTTCATGATCGTGCC+CGG | + | chr5_4:16728184-16728203 | Msa0840900:CDS | 40.0% |
| TGATACCGGAAAACAGTCAA+TGG | + | chr5_4:16728275-16728294 | Msa0840900:CDS | 40.0% | |
| AATTGGAGGAGGAAGATGAA+GGG | + | chr5_4:16728322-16728341 | Msa0840900:CDS | 40.0% | |
| !! | ATTTGGTGGTTCTAAGAGAG+GGG | + | chr5_4:16728434-16728453 | Msa0840900:CDS | 40.0% |
| AAAAGTGGGAATGATCGTGA+AGG | + | chr5_4:16728465-16728484 | Msa0840900:CDS | 40.0% | |
| GCTTATTTGGGCTTATCTAC+CGG | + | chr5_4:16728700-16728719 | Msa0840900:intron | 40.0% | |
| CTCATACATAAGACCCTGTT+TGG | - | chr5_4:16728945-16728964 | None:intergenic | 40.0% | |
| CTCATACATAAGACCCTGTT+TGG | - | chr5_4:16728945-16728964 | None:intergenic | 40.0% | |
| !! | CTTCGTTGTTTCTGTCATCA+AGG | + | chr5_4:16729249-16729268 | Msa0840900:intron | 40.0% |
| !! | TAATGAAGGTGCCAGGAATA+TGG | + | chr5_4:16729276-16729295 | Msa0840900:CDS | 40.0% |
| TCATCGTAACCATACAAAGC+AGG | - | chr5_4:16729337-16729356 | None:intergenic | 40.0% | |
| ! | TTATGTCATTTACTAGGCCG+AGG | + | chr5_4:16729633-16729652 | Msa0840900:intron | 40.0% |
| AAGAGGATGCTGAGCTTAAT+CGG | + | chr5_4:16729785-16729804 | Msa0840900:CDS | 40.0% | |
| GAGAGGACTTCTATAAGAAG+AGG | - | chr5_4:16729847-16729866 | None:intergenic | 40.0% | |
| ATATTTGGCAGACTTCCATC+AGG | - | chr5_4:16730032-16730051 | None:intergenic | 40.0% | |
| GCTGTCCGTATGTTGATATT+TGG | - | chr5_4:16730047-16730066 | None:intergenic | 40.0% | |
| ! | TAGGAGATTAGCCAAGGATT+TGG | + | chr5_4:16730396-16730415 | Msa0840900:CDS | 40.0% |
| !! | CTTCAAGAGTCAGCCATTTT+AGG | - | chr5_4:16730602-16730621 | None:intergenic | 40.0% |
| TGAAGACATGCGAAATACTG+AGG | + | chr5_4:16730736-16730755 | Msa0840900:CDS | 40.0% | |
| TGCGAAATACTGAGGATGAT+AGG | + | chr5_4:16730744-16730763 | Msa0840900:CDS | 40.0% | |
| GCGAAATACTGAGGATGATA+GGG | + | chr5_4:16730745-16730764 | Msa0840900:CDS | 40.0% | |
| !! | CAAGCGTACTTTTTAACCGA+TGG | - | chr5_4:16730785-16730804 | None:intergenic | 40.0% |
| AAGAGACGGTGATCTTGATT+TGG | + | chr5_4:16730923-16730942 | Msa0840900:CDS | 40.0% | |
| GTTTCACTTAAGGAATCACC+GGG | + | chr5_4:16730993-16731012 | Msa0840900:intron | 40.0% | |
| GATCACAAAATCCAAAGGTG+TGG | - | chr5_4:16731095-16731114 | None:intergenic | 40.0% | |
| ! | GGTCAATTTTAGATTGGGGA+CGG | - | chr5_4:16731117-16731136 | None:intergenic | 40.0% |
| ! | TCGGGGTCAATTTTAGATTG+GGG | - | chr5_4:16731121-16731140 | None:intergenic | 40.0% |
| ! | CATCGGGGTCAATTTTAGAT+TGG | - | chr5_4:16731123-16731142 | None:intergenic | 40.0% |
| CTTGTCATTGGAAGTTGGAA+AGG | - | chr5_4:16731313-16731332 | None:intergenic | 40.0% | |
| TTGTGTGCGGCTTATATCAA+CGG | + | chr5_4:16731354-16731373 | Msa0840900:intron | 40.0% | |
| !! | ACGGTGAAGTTTCTAGTGTA+TGG | + | chr5_4:16731373-16731392 | Msa0840900:intron | 40.0% |
| !! | CGGTGAAGTTTCTAGTGTAT+GGG | + | chr5_4:16731374-16731393 | Msa0840900:intron | 40.0% |
| !! | GGTGAAGTTTCTAGTGTATG+GGG | + | chr5_4:16731375-16731394 | Msa0840900:intron | 40.0% |
| TCACACGCCTGCTTATTTAT+TGG | - | chr5_4:16731423-16731442 | None:intergenic | 40.0% | |
| AAGCACAATGTAAAGTCGCT+AGG | - | chr5_4:16731462-16731481 | None:intergenic | 40.0% | |
| !!! | ATAGAATGGGTTCTGGCTTT+TGG | + | chr5_4:16731637-16731656 | Msa0840900:intron | 40.0% |
| ATTGGGTGCAAAACACCATA+TGG | - | chr5_4:16731765-16731784 | None:intergenic | 40.0% | |
| ACAGCATTAGGCCAAAGATT+GGG | - | chr5_4:16731782-16731801 | None:intergenic | 40.0% | |
| AACAGCATTAGGCCAAAGAT+TGG | - | chr5_4:16731783-16731802 | None:intergenic | 40.0% | |
| ATGGTACCAGAAACAGCATT+AGG | - | chr5_4:16731794-16731813 | None:intergenic | 40.0% | |
| ! | TTCTCACACTCACGGTATTT+TGG | - | chr5_4:16731925-16731944 | None:intergenic | 40.0% |
| AAATACCGTGAGTGTGAGAA+TGG | + | chr5_4:16731925-16731944 | Msa0840900:intron | 40.0% | |
| AATACCGTGAGTGTGAGAAT+GGG | + | chr5_4:16731926-16731945 | Msa0840900:intron | 40.0% | |
| TTGTTTGATAAGCACACTGC+AGG | + | chr5_4:16732026-16732045 | Msa0840900:intron | 40.0% | |
| TGTTTGATAAGCACACTGCA+GGG | + | chr5_4:16732027-16732046 | Msa0840900:intron | 40.0% | |
| CTGCAGTTAACAATCCACAT+TGG | - | chr5_4:16732216-16732235 | None:intergenic | 40.0% | |
| ACCAAAAAAGAAGCAGCTTC+AGG | + | chr5_4:16732265-16732284 | Msa0840900:CDS | 40.0% | |
| CAGTACAACAATTCACGTCA+GGG | - | chr5_4:16732393-16732412 | None:intergenic | 40.0% | |
| TCAGTACAACAATTCACGTC+AGG | - | chr5_4:16732394-16732413 | None:intergenic | 40.0% | |
| !! | CATCTGCTGCACATTTTAAC+TGG | - | chr5_4:16732425-16732444 | None:intergenic | 40.0% |
| AATAATGGCCCAATGTACTG+TGG | - | chr5_4:16732570-16732589 | None:intergenic | 40.0% | |
| ! | ATCGGGTTTTTGTGCGTGAA+TGG | - | chr5_4:16727886-16727905 | None:intergenic | 45.0% |
| ATTGTCTTCGTAACCCATGG+TGG | - | chr5_4:16727963-16727982 | None:intergenic | 45.0% | |
| ACGTCGTCGTAATCCATCAA+CGG | - | chr5_4:16728099-16728118 | None:intergenic | 45.0% | |
| TACGACGACGTACAATCTGA+CGG | + | chr5_4:16728108-16728127 | Msa0840900:CDS | 45.0% | |
| ! | TCGAAATCGTCGAGTTGTTG+TGG | - | chr5_4:16728150-16728169 | None:intergenic | 45.0% |
| GACGAATCGTTGTCGTAAAC+CGG | - | chr5_4:16728219-16728238 | None:intergenic | 45.0% | |
| ATTCGTCGAAATCAAAGCCG+AGG | + | chr5_4:16728232-16728251 | Msa0840900:CDS | 45.0% | |
| TCCAATTCATCTTCCAGCTC+CGG | - | chr5_4:16728309-16728328 | None:intergenic | 45.0% | |
| GAATTGGAGGAGGAAGATGA+AGG | + | chr5_4:16728321-16728340 | Msa0840900:CDS | 45.0% | |
| AAGAAGGAGAAGAGGCTGAA+AGG | + | chr5_4:16728381-16728400 | Msa0840900:CDS | 45.0% | |
| AGAAGGAGAAGAGGCTGAAA+GGG | + | chr5_4:16728382-16728401 | Msa0840900:CDS | 45.0% | |
| ! | GTAGTAGTAGTGGAAAGGGT+GGG | + | chr5_4:16728406-16728425 | Msa0840900:CDS | 45.0% |
| GGAAAGGGTGGGTCTAAATT+TGG | + | chr5_4:16728417-16728436 | Msa0840900:CDS | 45.0% | |
| AAGGGTGGGTCTAAATTTGG+TGG | + | chr5_4:16728420-16728439 | Msa0840900:CDS | 45.0% | |
| ! | TGCACTTGCTGGAAATTCTG+AGG | + | chr5_4:16728509-16728528 | Msa0840900:CDS | 45.0% |
| AGAGATGGGTCTGTTTGGAT+TGG | + | chr5_4:16728678-16728697 | Msa0840900:intron | 45.0% | |
| CTATCAGGGTAGAAAGGAGA+GGG | - | chr5_4:16729130-16729149 | None:intergenic | 45.0% | |
| TCTATCAGGGTAGAAAGGAG+AGG | - | chr5_4:16729131-16729150 | None:intergenic | 45.0% | |
| !! | AGGATGATAATGAAGGTGCC+AGG | + | chr5_4:16729269-16729288 | Msa0840900:intron | 45.0% |
| GGAGTAGAACCTGCTTTGTA+TGG | + | chr5_4:16729325-16729344 | Msa0840900:CDS | 45.0% | |
| TCAAATCAGCTGTAGAGTGC+TGG | + | chr5_4:16729474-16729493 | Msa0840900:intron | 45.0% | |
| ATCATCTTCCTCACCTTCCT+CGG | - | chr5_4:16729653-16729672 | None:intergenic | 45.0% | |
| GAATGTTATGGCTGAGCTTG+AGG | + | chr5_4:16729753-16729772 | Msa0840900:CDS | 45.0% | |
| AGAGAACAGCTGAAGAGAAG+TGG | + | chr5_4:16730208-16730227 | Msa0840900:CDS | 45.0% | |
| ! | GAAGAGAAGTGGTCTTGGAA+AGG | + | chr5_4:16730219-16730238 | Msa0840900:CDS | 45.0% |
| ! | AGAAGTGGTCTTGGAAAGGT+GGG | + | chr5_4:16730223-16730242 | Msa0840900:intron | 45.0% |
| !! | ACGATAGGGGTGTCTAAATG+TGG | + | chr5_4:16730272-16730291 | Msa0840900:intron | 45.0% |
| CTAGAGAAGAAAACTCGGGT+GGG | + | chr5_4:16730529-16730548 | Msa0840900:intron | 45.0% | |
| TAGAGAAGAAAACTCGGGTG+GGG | + | chr5_4:16730530-16730549 | Msa0840900:intron | 45.0% | |
| AGGATGATAGGGTTCCTTAC+AGG | + | chr5_4:16730756-16730775 | Msa0840900:CDS | 45.0% | |
| ATGATAGGGTTCCTTACAGG+AGG | + | chr5_4:16730759-16730778 | Msa0840900:CDS | 45.0% | |
| ! | AAATCCAAAGGTGTGGCTTC+TGG | - | chr5_4:16731088-16731107 | None:intergenic | 45.0% |
| GGACGGATCACAAAATCCAA+AGG | - | chr5_4:16731100-16731119 | None:intergenic | 45.0% | |
| TGCTCGTGCTCTGATTTCAT+CGG | - | chr5_4:16731140-16731159 | None:intergenic | 45.0% | |
| ACAAGACCAGCATCGTATGA+AGG | + | chr5_4:16731171-16731190 | Msa0840900:CDS | 45.0% | |
| ! | TTTCTAGTGTATGGGGCAGA+TGG | + | chr5_4:16731382-16731401 | Msa0840900:intron | 45.0% |
| ! | TCCACAAGTTGGGAATGCAA+GGG | - | chr5_4:16731709-16731728 | None:intergenic | 45.0% |
| ! | ATCCACAAGTTGGGAATGCA+AGG | - | chr5_4:16731710-16731729 | None:intergenic | 45.0% |
| ! | GGTGTTTTGCACCCAATCTT+TGG | + | chr5_4:16731768-16731787 | Msa0840900:intron | 45.0% |
| !! | CTTTGGCCTAATGCTGTTTC+TGG | + | chr5_4:16731785-16731804 | Msa0840900:intron | 45.0% |
| ATACCGTGAGTGTGAGAATG+GGG | + | chr5_4:16731927-16731946 | Msa0840900:intron | 45.0% | |
| ATATACTGATGCATCCCTGC+TGG | - | chr5_4:16731960-16731979 | None:intergenic | 45.0% | |
| !!! | GCCTGAAGCTGCTTCTTTTT+TGG | - | chr5_4:16732269-16732288 | None:intergenic | 45.0% |
| !! | GCTACAAAACTGAGTGTCGA+AGG | + | chr5_4:16732287-16732306 | Msa0840900:CDS | 45.0% |
| !! | ATTGGTTTGTCCAGCAAGCT+TGG | + | chr5_4:16732355-16732374 | Msa0840900:three_prime_UTR | 45.0% |
| CACTATGACATAGATGCCAG+AGG | - | chr5_4:16732465-16732484 | None:intergenic | 45.0% | |
| CGGATTGTCTTCGTAACCCA+TGG | - | chr5_4:16727966-16727985 | None:intergenic | 50.0% | |
| TGAAGACGGTGAACCGTTGA+TGG | + | chr5_4:16728083-16728102 | Msa0840900:CDS | 50.0% | |
| !! | CAGCGCCATTGACTGTTTTC+CGG | - | chr5_4:16728283-16728302 | None:intergenic | 50.0% |
| AATTCATCTTCCAGCTCCGG+TGG | - | chr5_4:16728306-16728325 | None:intergenic | 50.0% | |
| ACCGGAGCTGGAAGATGAAT+TGG | + | chr5_4:16728305-16728324 | Msa0840900:CDS | 50.0% | |
| GGAGCTGGAAGATGAATTGG+AGG | + | chr5_4:16728308-16728327 | Msa0840900:CDS | 50.0% | |
| GCTGGAAGATGAATTGGAGG+AGG | + | chr5_4:16728311-16728330 | Msa0840900:CDS | 50.0% | |
| AGGAAGATGAAGGGAGGAAG+CGG | + | chr5_4:16728331-16728350 | Msa0840900:CDS | 50.0% | |
| AAGGGAGGAAGCGGAAGAAA+GGG | + | chr5_4:16728340-16728359 | Msa0840900:CDS | 50.0% | |
| AAGCGGAAGAAAGGGAAGGA+AGG | + | chr5_4:16728348-16728367 | Msa0840900:CDS | 50.0% | |
| GGAAGAAAGGGAAGGAAGGT+GGG | + | chr5_4:16728352-16728371 | Msa0840900:CDS | 50.0% | |
| GAAGGAGAAGAGGCTGAAAG+GGG | + | chr5_4:16728383-16728402 | Msa0840900:CDS | 50.0% | |
| AAGGAGAAGAGGCTGAAAGG+GGG | + | chr5_4:16728384-16728403 | Msa0840900:CDS | 50.0% | |
| CTGAAAGGGGGTAGTAGTAG+TGG | + | chr5_4:16728396-16728415 | Msa0840900:CDS | 50.0% | |
| ! | AGGGGGTAGTAGTAGTGGAA+AGG | + | chr5_4:16728401-16728420 | Msa0840900:CDS | 50.0% |
| ! | GGGGGTAGTAGTAGTGGAAA+GGG | + | chr5_4:16728402-16728421 | Msa0840900:CDS | 50.0% |
| ! | GGTAGTAGTAGTGGAAAGGG+TGG | + | chr5_4:16728405-16728424 | Msa0840900:CDS | 50.0% |
| !! | GTTCTAAGAGAGGGGTTGGT+GGG | + | chr5_4:16728442-16728461 | Msa0840900:CDS | 50.0% |
| GTCATTTACTAGGCCGAGGA+AGG | + | chr5_4:16729637-16729656 | Msa0840900:intron | 50.0% | |
| GCTTGAGGTTACAGCAGAAG+AGG | + | chr5_4:16729768-16729787 | Msa0840900:CDS | 50.0% | |
| CAGCTGAAGAGAAGTGGTCT+TGG | + | chr5_4:16730214-16730233 | Msa0840900:CDS | 50.0% | |
| ! | GAGAAGTGGTCTTGGAAAGG+TGG | + | chr5_4:16730222-16730241 | Msa0840900:intron | 50.0% |
| GCTAGAGAAGAAAACTCGGG+TGG | + | chr5_4:16730528-16730547 | Msa0840900:intron | 50.0% | |
| TTAACCGATGGCCTCCTGTA+AGG | - | chr5_4:16730773-16730792 | None:intergenic | 50.0% | |
| ! | ATCCCTGCAGCTTTAGTTGC+TGG | - | chr5_4:16730897-16730916 | None:intergenic | 50.0% |
| GCAGGGATGCAATCAAGAGA+CGG | + | chr5_4:16730909-16730928 | Msa0840900:CDS | 50.0% | |
| CACTTAAGGAATCACCGGGA+TGG | + | chr5_4:16730997-16731016 | Msa0840900:intron | 50.0% | |
| TTGTAATGCAGGCCTAGGTC+CGG | + | chr5_4:16731031-16731050 | Msa0840900:intron | 50.0% | |
| CTTCCAGGCAACATGCATCA+AGG | + | chr5_4:16731062-16731081 | Msa0840900:CDS | 50.0% | |
| CTCGTGCTCTGATTTCATCG+GGG | - | chr5_4:16731138-16731157 | None:intergenic | 50.0% | |
| GCTCGTGCTCTGATTTCATC+GGG | - | chr5_4:16731139-16731158 | None:intergenic | 50.0% | |
| GACCAGCATCGTATGAAGGT+AGG | + | chr5_4:16731175-16731194 | Msa0840900:intron | 50.0% | |
| CACCTACCTTCATACGATGC+TGG | - | chr5_4:16731180-16731199 | None:intergenic | 50.0% | |
| TCCCTTGCATTCCCAACTTG+TGG | + | chr5_4:16731705-16731724 | Msa0840900:intron | 50.0% | |
| TACCGTGAGTGTGAGAATGG+GGG | + | chr5_4:16731928-16731947 | Msa0840900:intron | 50.0% | |
| !! | AAACTGAGTGTCGAAGGTCG+TGG | + | chr5_4:16732293-16732312 | Msa0840900:CDS | 50.0% |
| GCGCATTATACCAAGCTTGC+TGG | - | chr5_4:16732368-16732387 | None:intergenic | 50.0% | |
| GACGTACAATCTGACGGCGA+AGG | + | chr5_4:16728114-16728133 | Msa0840900:CDS | 55.0% | |
| ATCTGACGGCGAAGGATCAC+CGG | + | chr5_4:16728122-16728141 | Msa0840900:CDS | 55.0% | |
| ! | TCGTCGAGTTGTTGTGGCTC+CGG | - | chr5_4:16728144-16728163 | None:intergenic | 55.0% |
| GTAAACCGGTGTCTGTGACC+GGG | - | chr5_4:16728205-16728224 | None:intergenic | 55.0% | |
| CGTAAACCGGTGTCTGTGAC+CGG | - | chr5_4:16728206-16728225 | None:intergenic | 55.0% | |
| TGGAGGAGGAAGATGAAGGG+AGG | + | chr5_4:16728325-16728344 | Msa0840900:CDS | 55.0% | |
| GAAGGGAGGAAGCGGAAGAA+AGG | + | chr5_4:16728339-16728358 | Msa0840900:CDS | 55.0% | |
| GAGGAAGCGGAAGAAAGGGA+AGG | + | chr5_4:16728344-16728363 | Msa0840900:CDS | 55.0% | |
| CGGAAGAAAGGGAAGGAAGG+TGG | + | chr5_4:16728351-16728370 | Msa0840900:CDS | 55.0% | |
| AAAGGGAAGGAAGGTGGGTC+TGG | + | chr5_4:16728357-16728376 | Msa0840900:CDS | 55.0% | |
| AAGGGAAGGAAGGTGGGTCT+GGG | + | chr5_4:16728358-16728377 | Msa0840900:CDS | 55.0% | |
| GGTCTGGGAAGAAGGAGAAG+AGG | + | chr5_4:16728373-16728392 | Msa0840900:CDS | 55.0% | |
| !! | GGTGGTTCTAAGAGAGGGGT+TGG | + | chr5_4:16728438-16728457 | Msa0840900:CDS | 55.0% |
| !! | GGTTCTAAGAGAGGGGTTGG+TGG | + | chr5_4:16728441-16728460 | Msa0840900:CDS | 55.0% |
| !! | AGAGGGGTTGGTGGGAAAAG+TGG | + | chr5_4:16728450-16728469 | Msa0840900:CDS | 55.0% |
| !! | GAGGGGTTGGTGGGAAAAGT+GGG | + | chr5_4:16728451-16728470 | Msa0840900:CDS | 55.0% |
| GAGATGTGGGATGCACTTGC+TGG | + | chr5_4:16728498-16728517 | Msa0840900:CDS | 55.0% | |
| TACGATGAACCGCGTTCTCC+TGG | + | chr5_4:16729349-16729368 | Msa0840900:CDS | 55.0% | |
| !! | TTAACCTGTGGAGCATCGCC+AGG | - | chr5_4:16729370-16729389 | None:intergenic | 55.0% |
| TTACTAGGCCGAGGAAGGTG+AGG | + | chr5_4:16729642-16729661 | Msa0840900:intron | 55.0% | |
| TGGCTTGAGCCACTTCCTGA+TGG | + | chr5_4:16730014-16730033 | Msa0840900:CDS | 55.0% | |
| GGCAGACTTCCATCAGGAAG+TGG | - | chr5_4:16730026-16730045 | None:intergenic | 55.0% | |
| GGTTCCTTACAGGAGGCCAT+CGG | + | chr5_4:16730766-16730785 | Msa0840900:CDS | 55.0% | |
| AGGCCAGCAACTAAAGCTGC+AGG | + | chr5_4:16730891-16730910 | Msa0840900:intron | 55.0% | |
| GGCCAGCAACTAAAGCTGCA+GGG | + | chr5_4:16730892-16730911 | Msa0840900:intron | 55.0% | |
| TTGCCTGGAAGACGACTCTC+CGG | - | chr5_4:16731053-16731072 | None:intergenic | 55.0% | |
| ! | TGGCCTTGATGCATGTTGCC+TGG | - | chr5_4:16731068-16731087 | None:intergenic | 55.0% |
| AAGGCCAGAAGCCACACCTT+TGG | + | chr5_4:16731081-16731100 | Msa0840900:CDS | 55.0% | |
| TGCCCCCATTCTCACACTCA+CGG | - | chr5_4:16731933-16731952 | None:intergenic | 55.0% | |
| ! | AATGGGGGCATATGCCAGCA+GGG | + | chr5_4:16731943-16731962 | Msa0840900:intron | 55.0% |
| !! | GAGTGTCGAAGGTCGTGGTA+TGG | + | chr5_4:16732298-16732317 | Msa0840900:CDS | 55.0% |
| GCCAGAGGAGATTCGCATCA+GGG | - | chr5_4:16732450-16732469 | None:intergenic | 55.0% | |
| TGCCAGAGGAGATTCGCATC+AGG | - | chr5_4:16732451-16732470 | None:intergenic | 55.0% | |
| ACAGTCAATGGCGCTGCCAC+CGG | + | chr5_4:16728287-16728306 | Msa0840900:CDS | 60.0% | |
| GGAAGGTGGGTCTGGGAAGA+AGG | + | chr5_4:16728365-16728384 | Msa0840900:CDS | 60.0% | |
| TTCTCCTGGCGATGCTCCAC+AGG | + | chr5_4:16729363-16729382 | Msa0840900:CDS | 60.0% | |
| GAAGACGACTCTCCGGACCT+AGG | - | chr5_4:16731046-16731065 | None:intergenic | 60.0% | |
| ! | GAATGGGGGCATATGCCAGC+AGG | + | chr5_4:16731942-16731961 | Msa0840900:intron | 60.0% |
| GCCCTGATGCGAATCTCCTC+TGG | + | chr5_4:16732446-16732465 | Msa0840900:three_prime_UTR | 60.0% | |
| TCGTGCCCGGTCACAGACAC+CGG | + | chr5_4:16728197-16728216 | Msa0840900:CDS | 65.0% | |
| !! | GGAGCATCGCCAGGAGAACG+CGG | - | chr5_4:16729361-16729380 | None:intergenic | 65.0% |
| GGTCCGGAGAGTCGTCTTCC+AGG | + | chr5_4:16731047-16731066 | Msa0840900:CDS | 65.0% | |
| AATGGCGCTGCCACCGGAGC+TGG | + | chr5_4:16728293-16728312 | Msa0840900:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 16727850 | 16732727 | 16727850 | ID=Msa0840900;Name=Msa0840900 |
| chr5_4 | mRNA | 16727850 | 16732727 | 16727850 | ID=Msa0840900-mRNA-1;Parent=Msa0840900;Name=Msa0840900-mRNA-1;_AED=0.05;_eAED=0.05;_QI=115|1|1|1|0.9|0.90|11|393|495 |
| chr5_4 | exon | 16727850 | 16727984 | 16727850 | ID=Msa0840900-mRNA-1:exon:7217;Parent=Msa0840900-mRNA-1 |
| chr5_4 | exon | 16728074 | 16728530 | 16728074 | ID=Msa0840900-mRNA-1:exon:7218;Parent=Msa0840900-mRNA-1 |
| chr5_4 | exon | 16729271 | 16729384 | 16729271 | ID=Msa0840900-mRNA-1:exon:7219;Parent=Msa0840900-mRNA-1 |
| chr5_4 | exon | 16729649 | 16729869 | 16729649 | ID=Msa0840900-mRNA-1:exon:7220;Parent=Msa0840900-mRNA-1 |
| chr5_4 | exon | 16729959 | 16730088 | 16729959 | ID=Msa0840900-mRNA-1:exon:7221;Parent=Msa0840900-mRNA-1 |
| chr5_4 | exon | 16730178 | 16730240 | 16730178 | ID=Msa0840900-mRNA-1:exon:7222;Parent=Msa0840900-mRNA-1 |
| chr5_4 | exon | 16730352 | 16730429 | 16730352 | ID=Msa0840900-mRNA-1:exon:7223;Parent=Msa0840900-mRNA-1 |
| chr5_4 | exon | 16730704 | 16730795 | 16730704 | ID=Msa0840900-mRNA-1:exon:7224;Parent=Msa0840900-mRNA-1 |
| chr5_4 | exon | 16730893 | 16730955 | 16730893 | ID=Msa0840900-mRNA-1:exon:7225;Parent=Msa0840900-mRNA-1 |
| chr5_4 | exon | 16731042 | 16731192 | 16731042 | ID=Msa0840900-mRNA-1:exon:7226;Parent=Msa0840900-mRNA-1 |
| chr5_4 | exon | 16732236 | 16732727 | 16732236 | ID=Msa0840900-mRNA-1:exon:7227;Parent=Msa0840900-mRNA-1 |
| chr5_4 | five_prime_UTR | 16727850 | 16727964 | 16727850 | ID=Msa0840900-mRNA-1:five_prime_utr;Parent=Msa0840900-mRNA-1 |
| chr5_4 | CDS | 16727965 | 16727984 | 16727965 | ID=Msa0840900-mRNA-1:cds;Parent=Msa0840900-mRNA-1 |
| chr5_4 | CDS | 16728074 | 16728530 | 16728074 | ID=Msa0840900-mRNA-1:cds;Parent=Msa0840900-mRNA-1 |
| chr5_4 | CDS | 16729271 | 16729384 | 16729271 | ID=Msa0840900-mRNA-1:cds;Parent=Msa0840900-mRNA-1 |
| chr5_4 | CDS | 16729649 | 16729869 | 16729649 | ID=Msa0840900-mRNA-1:cds;Parent=Msa0840900-mRNA-1 |
| chr5_4 | CDS | 16729959 | 16730088 | 16729959 | ID=Msa0840900-mRNA-1:cds;Parent=Msa0840900-mRNA-1 |
| chr5_4 | CDS | 16730178 | 16730240 | 16730178 | ID=Msa0840900-mRNA-1:cds;Parent=Msa0840900-mRNA-1 |
| chr5_4 | CDS | 16730352 | 16730429 | 16730352 | ID=Msa0840900-mRNA-1:cds;Parent=Msa0840900-mRNA-1 |
| chr5_4 | CDS | 16730704 | 16730795 | 16730704 | ID=Msa0840900-mRNA-1:cds;Parent=Msa0840900-mRNA-1 |
| chr5_4 | CDS | 16730893 | 16730955 | 16730893 | ID=Msa0840900-mRNA-1:cds;Parent=Msa0840900-mRNA-1 |
| chr5_4 | CDS | 16731042 | 16731192 | 16731042 | ID=Msa0840900-mRNA-1:cds;Parent=Msa0840900-mRNA-1 |
| chr5_4 | CDS | 16732236 | 16732334 | 16732236 | ID=Msa0840900-mRNA-1:cds;Parent=Msa0840900-mRNA-1 |
| chr5_4 | three_prime_UTR | 16732335 | 16732727 | 16732335 | ID=Msa0840900-mRNA-1:three_prime_utr;Parent=Msa0840900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
