AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0845490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0845490 MtrunA17_Chr5g0417001 95.012 401 8 3 1 399 1 391 0.0 776
Msa0845490 MtrunA17_Chr8g0361731 63.934 427 94 14 1 399 1 395 2.21e-175 494
Msa0845490 MtrunA17_Chr6g0453131 47.926 434 148 18 1 399 1 391 1.91e-117 347
Msa0845490 MtrunA17_Chr5g0442771 52.966 236 97 5 6 234 10 238 2.22e-78 244
Msa0845490 MtrunA17_Chr2g0311651 57.547 212 74 6 6 203 16 225 5.25e-76 238
Msa0845490 MtrunA17_Chr2g0311661 61.453 179 55 4 11 179 18 192 1.95e-73 231
Msa0845490 MtrunA17_Chr4g0047841 50.838 179 71 2 14 176 15 192 2.07e-61 201
Msa0845490 MtrunA17_Chr2g0318101 52.381 168 67 2 16 175 17 179 1.48e-60 199
Msa0845490 MtrunA17_Chr4g0076731 54.938 162 62 3 12 173 52 202 9.14e-60 200
Msa0845490 MtrunA17_Chr7g0252971 46.919 211 92 4 16 219 10 207 1.41e-59 196
Msa0845490 MtrunA17_Chr3g0124761 40.392 255 127 6 16 261 9 247 5.01e-59 193
Msa0845490 MtrunA17_Chr2g0326361 51.744 172 79 2 1 172 1 168 5.82e-59 194
Msa0845490 MtrunA17_Chr5g0417791 53.988 163 65 3 16 176 5 159 1.81e-57 189
Msa0845490 MtrunA17_Chr8g0384721 53.503 157 66 2 16 172 9 158 3.49e-56 186
Msa0845490 MtrunA17_Chr2g0318081 53.039 181 74 5 16 196 18 187 3.65e-56 188
Msa0845490 MtrunA17_Chr7g0263931 53.125 160 71 2 16 175 13 168 6.64e-55 184
Msa0845490 MtrunA17_Chr4g0042561 54.037 161 64 3 16 174 11 163 7.63e-55 182
Msa0845490 MtrunA17_Chr4g0018391 48.256 172 74 3 14 182 7 166 7.83e-54 182
Msa0845490 MtrunA17_Chr3g0130731 52.229 157 67 2 16 172 9 157 1.32e-53 179
Msa0845490 MtrunA17_Chr8g0372121 36.364 264 142 5 10 263 2 249 1.41e-53 180
Msa0845490 MtrunA17_Chr8g0359921 53.614 166 68 4 16 181 16 172 1.42e-53 181
Msa0845490 MtrunA17_Chr5g0398971 39.583 240 111 6 14 234 7 231 1.46e-52 179
Msa0845490 MtrunA17_Chr5g0405211 45.161 186 85 5 8 188 2 175 2.64e-52 178
Msa0845490 MtrunA17_Chr3g0091921 50.549 182 80 4 8 189 10 181 6.29e-52 176
Msa0845490 MtrunA17_Chr4g0060931 49.153 177 76 4 8 182 13 177 7.89e-52 177
Msa0845490 MtrunA17_Chr4g0056541 47.337 169 74 3 14 179 7 163 2.03e-51 176
Msa0845490 MtrunA17_Chr2g0309891 51.250 160 67 4 16 173 8 158 2.16e-51 175
Msa0845490 MtrunA17_Chr6g0453451 53.797 158 65 3 16 173 22 171 3.38e-50 171
Msa0845490 MtrunA17_Chr4g0038751 46.552 174 76 3 11 180 12 172 1.51e-49 169
Msa0845490 MtrunA17_Chr2g0316971 48.485 165 79 2 11 175 20 178 2.56e-49 171
Msa0845490 MtrunA17_Chr1g0200561 42.708 192 94 4 3 191 8 186 3.78e-49 169
Msa0845490 MtrunA17_Chr6g0481091 42.857 189 95 4 16 202 8 185 4.05e-49 166
Msa0845490 MtrunA17_Chr4g0017921 49.390 164 67 3 14 174 8 158 1.13e-48 168
Msa0845490 MtrunA17_Chr6g0461661 46.667 180 84 4 9 184 11 182 1.45e-48 169
Msa0845490 MtrunA17_Chr7g0253011 46.703 182 85 4 5 182 8 181 1.79e-48 169
Msa0845490 MtrunA17_Chr3g0109821 43.915 189 92 6 16 202 8 184 4.13e-48 173
Msa0845490 MtrunA17_Chr6g0484441 45.562 169 80 3 10 178 1 157 5.58e-48 166
Msa0845490 MtrunA17_Chr3g0139331 47.159 176 78 3 1 175 1 162 6.57e-48 166
Msa0845490 MtrunA17_Chr7g0214071 48.603 179 78 3 1 178 1 166 1.90e-47 162
Msa0845490 MtrunA17_Chr2g0309331 32.333 300 158 6 13 309 9 266 8.21e-47 163
Msa0845490 MtrunA17_Chr5g0433781 46.250 160 74 3 16 173 8 157 2.05e-46 168
Msa0845490 MtrunA17_Chr5g0400461 48.193 166 64 5 16 172 8 160 3.03e-46 161
Msa0845490 MtrunA17_Chr8g0346001 46.429 168 78 4 14 174 15 177 7.84e-46 163
Msa0845490 MtrunA17_Chr1g0147421 45.143 175 82 4 1 173 15 177 7.84e-46 161
Msa0845490 MtrunA17_Chr4g0054791 47.647 170 78 4 16 182 8 169 9.83e-46 160
Msa0845490 MtrunA17_Chr5g0428991 48.148 162 72 4 17 176 28 179 2.37e-45 165
Msa0845490 MtrunA17_Chr3g0128151 41.546 207 100 6 17 219 25 214 2.32e-44 162
Msa0845490 MtrunA17_Chr7g0217721 48.503 167 73 5 17 174 22 184 3.18e-44 157
Msa0845490 MtrunA17_Chr2g0312321 45.294 170 82 4 10 179 7 165 6.67e-44 154
Msa0845490 MtrunA17_Chr1g0201021 45.963 161 75 3 15 173 20 170 8.08e-44 160
Msa0845490 MtrunA17_Chr1g0183741 36.697 218 118 4 16 231 12 211 1.34e-43 153
Msa0845490 MtrunA17_Chr3g0144271 52.448 143 66 2 3 143 11 153 2.07e-43 156
Msa0845490 MtrunA17_Chr3g0130101 44.172 163 79 4 12 172 5 157 2.62e-43 154
Msa0845490 MtrunA17_Chr8g0364791 41.040 173 90 4 14 184 6 168 4.52e-43 155
Msa0845490 MtrunA17_Chr3g0128111 42.073 164 83 4 17 178 45 198 5.43e-43 150
Msa0845490 MtrunA17_Chr7g0217711 52.344 128 59 1 17 144 22 147 2.66e-42 146
Msa0845490 MtrunA17_Chr8g0384201 39.306 173 93 3 14 184 6 168 3.38e-41 152
Msa0845490 MtrunA17_Chr7g0261411 41.935 155 78 1 16 170 12 154 5.36e-41 146
Msa0845490 MtrunA17_Chr1g0197351 43.860 171 74 4 14 174 42 200 1.38e-40 150
Msa0845490 MtrunA17_Chr1g0197361 44.172 163 77 5 16 175 10 161 3.20e-40 150
Msa0845490 MtrunA17_Chr8g0385991 44.805 154 80 2 16 169 16 164 2.80e-39 140
Msa0845490 MtrunA17_Chr3g0092671 44.785 163 76 6 16 175 7 158 5.43e-39 146
Msa0845490 MtrunA17_Chr3g0131911 42.515 167 90 3 16 180 16 178 3.28e-36 132
Msa0845490 MtrunA17_Chr8g0345671 45.865 133 68 3 17 146 14 145 1.12e-33 129
Msa0845490 MtrunA17_Chr4g0026141 44.118 136 70 3 10 140 1 135 2.04e-33 125
Msa0845490 MtrunA17_Chr2g0321631 46.617 133 60 5 16 140 6 135 1.54e-32 123
Msa0845490 MtrunA17_Chr7g0266701 36.585 164 94 5 16 173 6 165 2.34e-32 122
Msa0845490 MtrunA17_Chr8g0345691 46.269 134 67 4 10 140 9 140 3.89e-32 125
Msa0845490 MtrunA17_Chr4g0050701 36.943 157 89 2 16 172 13 159 1.62e-29 113
Msa0845490 MtrunA17_Chr3g0113001 44.355 124 62 3 59 182 10 126 6.31e-28 111
Msa0845490 MtrunA17_Chr8g0345711 40.945 127 71 3 17 140 15 140 9.74e-28 107
Msa0845490 MtrunA17_Chr2g0321741 37.013 154 75 5 34 182 12 148 6.66e-26 107
Msa0845490 MtrunA17_Chr8g0345731 41.860 129 70 4 17 140 27 155 1.60e-25 101
Msa0845490 MtrunA17_Chr8g0345721 33.951 162 74 3 17 146 38 198 2.17e-23 97.1
Msa0845490 MtrunA17_Chr8g0345741 39.496 119 68 3 25 140 2 119 1.33e-22 93.2
Msa0845490 MtrunA17_Chr8g0384351 33.533 167 81 6 16 182 12 148 1.21e-19 85.9
Msa0845490 MtrunA17_Chr3g0113031 44.898 98 48 3 77 174 3 94 2.17e-19 87.4
Msa0845490 MtrunA17_Chr7g0243371 46.753 77 41 0 67 143 17 93 2.38e-19 83.2
Msa0845490 MtrunA17_Chr8g0345701 35.461 141 71 5 17 140 10 147 4.81e-19 84.0
Msa0845490 MtrunA17_Chr7g0251651 34.058 138 84 5 11 145 14 147 5.59e-18 81.6
Msa0845490 MtrunA17_Chr7g0251671 30.370 135 86 5 17 148 13 142 3.15e-17 78.6
Msa0845490 MtrunA17_Chr7g0251661 32.374 139 87 5 12 147 7 141 4.28e-17 78.2
Msa0845490 MtrunA17_Chr3g0130321 30.247 162 97 6 16 171 9 160 5.66e-15 73.6
Msa0845490 MtrunA17_Chr1g0194791 59.574 47 18 1 16 61 48 94 5.37e-13 64.7
Msa0845490 MtrunA17_Chr7g0274971 27.907 172 103 7 20 183 11 169 6.42e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0845490 AT1G26870.1 55.657 327 122 8 2 313 3 321 1.31e-110 331
Msa0845490 AT5G39820.1 67.839 199 50 3 2 186 8 206 3.46e-98 296
Msa0845490 AT2G43000.1 63.793 174 52 3 6 179 10 172 4.28e-76 237
Msa0845490 AT3G12910.1 46.484 256 127 5 6 254 13 265 6.29e-67 215
Msa0845490 AT2G02450.2 55.625 160 60 3 13 172 50 198 4.77e-60 200
Msa0845490 AT2G02450.1 55.625 160 60 3 13 172 50 198 4.90e-60 199
Msa0845490 AT3G04070.2 54.217 166 68 3 16 176 12 174 8.06e-59 195
Msa0845490 AT3G15510.1 52.695 167 66 2 18 176 21 182 1.20e-58 195
Msa0845490 AT1G61110.1 53.179 173 73 3 16 181 18 189 4.27e-57 190
Msa0845490 AT3G04070.1 49.451 182 68 3 16 176 12 190 2.33e-56 189
Msa0845490 AT1G01720.1 52.121 165 72 2 16 180 9 166 6.97e-56 186
Msa0845490 AT1G69490.1 44.076 211 108 5 16 222 11 215 1.52e-55 184
Msa0845490 AT4G27410.2 49.724 181 79 4 16 196 16 184 7.12e-55 183
Msa0845490 AT1G77450.1 51.829 164 71 2 16 179 12 167 1.18e-54 181
Msa0845490 AT1G76420.1 40.467 257 128 6 2 249 15 255 2.19e-54 183
Msa0845490 AT3G15500.1 53.939 165 66 4 16 180 16 170 2.77e-54 182
Msa0845490 AT1G52890.1 51.705 176 74 5 16 191 16 180 3.54e-54 182
Msa0845490 AT4G36160.1 48.876 178 76 4 14 188 10 175 5.79e-54 183
Msa0845490 AT4G36160.3 48.876 178 76 4 14 188 10 175 5.79e-54 183
Msa0845490 AT5G63790.1 41.880 234 113 6 12 234 47 268 5.91e-54 181
Msa0845490 AT4G36160.2 48.876 178 76 4 14 188 14 179 6.06e-54 183
Msa0845490 AT5G08790.1 52.727 165 71 3 12 175 4 162 6.67e-54 180
Msa0845490 AT5G63790.2 41.880 234 113 6 12 234 57 278 6.81e-54 181
Msa0845490 AT1G52880.1 55.952 168 64 3 18 179 21 184 1.12e-53 181
Msa0845490 AT5G07680.1 44.934 227 105 6 4 220 9 225 1.76e-53 181
Msa0845490 AT5G61430.1 35.256 312 152 8 4 293 8 291 1.04e-52 179
Msa0845490 AT5G07680.2 46.047 215 98 5 16 220 5 211 1.98e-52 177
Msa0845490 AT5G39610.1 49.457 184 79 4 1 182 9 180 2.77e-52 176
Msa0845490 AT2G18060.3 47.191 178 78 5 14 188 9 173 3.49e-52 178
Msa0845490 AT2G18060.1 47.191 178 78 5 14 188 9 173 3.49e-52 178
Msa0845490 AT1G12260.2 47.929 169 73 3 14 179 7 163 1.59e-51 176
Msa0845490 AT5G62380.2 49.398 166 69 4 14 176 7 160 1.59e-51 176
Msa0845490 AT5G62380.1 49.398 166 69 4 14 176 7 160 1.59e-51 176
Msa0845490 AT1G12260.1 47.929 169 73 3 14 179 7 163 1.93e-51 177
Msa0845490 AT2G17040.1 49.711 173 70 4 12 180 4 163 2.14e-51 174
Msa0845490 AT3G18400.1 49.708 171 74 4 10 180 1 159 7.22e-51 173
Msa0845490 AT4G10350.1 50.000 164 69 3 14 174 9 162 1.05e-50 174
Msa0845490 AT2G24430.2 46.199 171 83 1 8 178 10 171 1.33e-50 173
Msa0845490 AT2G24430.1 46.199 171 83 1 8 178 10 171 1.33e-50 173
Msa0845490 AT4G27410.3 45.455 198 79 5 16 196 16 201 1.51e-50 172
Msa0845490 AT5G18270.1 48.837 172 76 4 5 174 13 174 4.24e-50 172
Msa0845490 AT3G17730.1 50.311 161 64 4 16 172 8 156 5.75e-50 169
Msa0845490 AT3G04060.1 48.851 174 76 4 1 172 9 171 5.96e-50 172
Msa0845490 AT1G62700.1 40.625 224 111 5 14 234 7 211 6.99e-50 173
Msa0845490 AT1G62700.2 40.625 224 111 5 14 234 7 211 6.99e-50 173
Msa0845490 AT5G18270.2 48.256 172 77 4 5 174 13 174 2.75e-49 170
Msa0845490 AT3G29035.1 51.111 180 73 6 3 179 15 182 2.89e-49 169
Msa0845490 AT3G03200.1 46.067 178 84 5 16 190 8 176 1.10e-48 172
Msa0845490 AT1G33280.1 49.390 164 67 3 14 174 8 158 1.50e-48 167
Msa0845490 AT4G17980.1 47.170 159 76 2 16 172 8 160 1.77e-48 166
Msa0845490 AT4G17980.2 47.170 159 76 2 16 172 8 160 2.33e-48 166
Msa0845490 AT5G53950.1 47.953 171 83 1 12 182 15 179 3.13e-48 168
Msa0845490 AT5G66300.1 35.692 325 149 14 14 324 12 290 3.23e-48 166
Msa0845490 AT1G65910.1 48.125 160 71 3 16 173 8 157 7.21e-48 172
Msa0845490 AT1G71930.2 39.908 218 112 7 16 229 11 213 1.22e-47 165
Msa0845490 AT1G71930.1 39.908 218 112 7 16 229 11 213 1.22e-47 165
Msa0845490 AT2G46770.1 45.614 171 79 4 14 174 16 182 2.54e-47 166
Msa0845490 AT5G17260.1 47.500 160 71 4 16 172 8 157 4.48e-47 167
Msa0845490 AT3G15170.1 47.929 169 81 3 11 178 16 178 5.87e-47 163
Msa0845490 AT5G13180.1 48.750 160 70 2 16 175 16 163 8.28e-47 161
Msa0845490 AT1G54330.1 47.590 166 72 4 16 179 8 160 1.34e-45 159
Msa0845490 AT3G61910.1 44.022 184 92 6 14 189 11 191 1.47e-45 160
Msa0845490 AT3G10500.1 46.951 164 75 4 14 175 9 162 1.69e-45 165
Msa0845490 AT3G12977.1 44.633 177 87 4 3 177 5 172 2.06e-45 158
Msa0845490 AT3G10490.1 45.833 168 70 4 14 174 27 180 4.15e-45 156
Msa0845490 AT4G35580.3 48.734 158 69 4 17 172 12 159 6.27e-45 163
Msa0845490 AT1G79580.3 45.732 164 74 3 14 174 17 168 6.52e-45 159
Msa0845490 AT1G79580.5 45.732 164 74 3 14 174 17 168 6.52e-45 159
Msa0845490 AT1G79580.4 45.732 164 74 3 14 174 17 168 6.52e-45 159
Msa0845490 AT1G79580.2 45.732 164 74 3 14 174 17 168 6.52e-45 159
Msa0845490 AT1G79580.1 45.732 164 74 3 14 174 17 168 6.52e-45 159
Msa0845490 AT5G46590.2 55.469 128 54 2 16 141 8 134 6.77e-45 157
Msa0845490 AT3G10480.1 46.061 165 74 4 14 174 27 180 6.85e-45 161
Msa0845490 AT4G35580.2 48.734 158 69 4 17 172 12 159 6.98e-45 163
Msa0845490 AT4G35580.1 48.734 158 69 4 17 172 12 159 7.11e-45 162
Msa0845490 AT3G10480.2 45.029 171 66 4 14 174 27 179 7.85e-45 161
Msa0845490 AT5G46590.1 55.469 128 54 2 16 141 8 134 9.92e-45 157
Msa0845490 AT1G33060.1 45.399 163 77 3 12 172 22 174 1.04e-44 164
Msa0845490 AT1G33060.2 45.399 163 77 3 12 172 22 174 1.10e-44 164
Msa0845490 AT1G56010.2 48.750 160 70 5 16 172 21 171 1.89e-44 157
Msa0845490 AT1G32770.1 44.828 174 73 5 14 174 16 179 1.95e-44 158
Msa0845490 AT3G10490.2 45.833 168 70 4 14 174 27 180 6.71e-44 159
Msa0845490 AT1G34180.3 42.328 189 90 4 16 195 18 196 7.06e-44 158
Msa0845490 AT5G24590.2 45.402 174 83 4 4 174 2 166 9.05e-44 158
Msa0845490 AT5G04410.1 45.732 164 77 3 14 175 9 162 1.22e-43 160
Msa0845490 AT1G34180.1 42.703 185 87 4 16 191 18 192 5.45e-43 158
Msa0845490 AT1G32510.1 42.442 172 85 3 16 180 8 172 2.00e-42 150
Msa0845490 AT3G49530.2 43.671 158 78 3 17 172 16 164 4.75e-42 152
Msa0845490 AT1G34190.1 45.679 162 76 3 16 175 18 169 5.01e-42 155
Msa0845490 AT1G34180.4 39.801 201 90 4 16 195 18 208 1.07e-41 153
Msa0845490 AT3G49530.1 44.099 161 78 4 15 172 13 164 1.30e-41 153
Msa0845490 AT2G33480.1 46.914 162 73 4 16 177 17 165 5.58e-41 146
Msa0845490 AT2G33480.2 44.944 178 82 5 1 177 1 163 6.27e-41 146
Msa0845490 AT1G34180.2 40.102 197 87 4 16 191 18 204 7.05e-41 152
Msa0845490 AT5G09330.5 41.615 161 82 3 14 172 6 156 1.17e-40 150
Msa0845490 AT5G09330.2 41.615 161 82 3 14 172 6 156 1.17e-40 150
Msa0845490 AT5G09330.4 41.615 161 82 3 14 172 6 156 1.17e-40 150
Msa0845490 AT5G09330.3 41.615 161 82 3 14 172 6 156 1.17e-40 150
Msa0845490 AT5G09330.1 41.615 161 82 3 14 172 6 156 1.17e-40 150
Msa0845490 AT4G28530.1 39.888 178 79 3 16 177 12 177 8.03e-40 145
Msa0845490 AT5G64060.1 33.898 295 150 13 14 296 6 267 2.51e-39 144
Msa0845490 AT3G10480.3 38.889 198 73 5 14 174 27 213 9.85e-39 146
Msa0845490 AT5G22290.1 41.520 171 80 5 14 180 21 175 1.06e-38 142
Msa0845490 AT3G44290.2 46.825 126 64 2 15 139 15 138 1.08e-36 134
Msa0845490 AT2G27300.1 43.750 128 69 2 13 139 13 138 2.22e-36 135
Msa0845490 AT3G44290.1 46.825 126 64 2 15 139 15 138 3.22e-36 135
Msa0845490 AT2G43000.2 61.538 104 29 3 76 179 2 94 6.48e-35 128
Msa0845490 AT5G04395.1 42.857 140 66 2 16 141 30 169 1.30e-33 124
Msa0845490 AT5G61430.2 33.071 254 122 7 62 293 1 228 1.48e-33 126
Msa0845490 AT1G32870.2 42.169 166 80 5 14 175 10 163 1.06e-31 126
Msa0845490 AT1G32870.1 42.169 166 80 5 14 175 10 163 1.11e-31 126
Msa0845490 AT1G32870.3 42.169 166 80 5 14 175 46 199 2.08e-31 125
Msa0845490 AT5G22380.1 36.453 203 108 10 11 206 3 191 2.60e-31 119
Msa0845490 AT5G64530.1 37.870 169 87 3 16 178 5 161 2.97e-31 118
Msa0845490 AT4G10350.2 50.877 114 46 2 61 174 12 115 6.02e-31 120
Msa0845490 AT3G12977.2 48.696 115 50 3 63 177 14 119 2.73e-30 116
Msa0845490 AT5G64530.2 44.882 127 58 2 16 142 5 119 4.74e-30 114
Msa0845490 AT3G44350.2 31.858 226 127 7 10 219 1 215 8.95e-30 115
Msa0845490 AT1G56010.1 48.649 111 50 3 62 172 1 104 1.47e-28 112
Msa0845490 AT3G44350.1 39.130 138 74 4 10 140 1 135 6.20e-28 108
Msa0845490 AT4G01550.1 41.045 134 75 3 15 144 5 138 2.89e-27 113
Msa0845490 AT4G01520.1 38.462 143 81 5 17 154 7 147 5.24e-25 104
Msa0845490 AT4G01540.3 39.310 145 81 5 15 154 5 147 8.33e-25 105
Msa0845490 AT4G01540.4 39.310 145 81 5 15 154 5 147 1.31e-24 104
Msa0845490 AT4G01540.1 39.310 145 81 5 15 154 5 147 1.60e-24 105
Msa0845490 AT4G01540.2 39.310 145 81 5 15 154 5 147 1.80e-24 104
Msa0845490 AT2G33480.3 42.342 111 54 3 67 177 8 108 1.11e-21 92.8
Msa0845490 AT2G18060.2 49.485 97 36 4 92 188 2 85 1.14e-21 94.4
Msa0845490 AT4G28530.2 38.889 126 61 2 16 125 12 137 3.08e-21 94.0
Msa0845490 AT1G02230.1 39.098 133 73 4 17 144 6 135 6.36e-21 93.6
Msa0845490 AT1G02250.1 41.406 128 67 4 17 139 6 130 1.25e-20 92.8
Msa0845490 AT3G04420.2 39.370 127 71 3 17 139 6 130 1.58e-20 91.3
Msa0845490 AT3G04420.1 39.370 127 71 3 17 139 6 130 7.06e-20 90.5
Msa0845490 AT1G01010.1 39.706 136 66 7 17 140 6 137 9.96e-18 85.1
Msa0845490 AT1G02220.1 39.370 127 68 4 17 139 6 127 1.06e-16 81.6
Msa0845490 AT5G14000.2 33.071 127 79 3 17 141 18 140 1.51e-15 73.9
Msa0845490 AT5G14000.1 27.273 165 103 4 17 179 18 167 2.18e-15 75.1
Msa0845490 AT5G50820.1 36.842 133 68 6 16 143 19 140 2.36e-15 74.3
Msa0845490 AT3G56530.1 32.090 134 86 3 16 146 54 185 3.55e-14 73.2
Msa0845490 AT3G10490.4 37.634 93 39 3 87 174 2 80 5.64e-13 70.1
Msa0845490 AT3G10490.3 37.634 93 39 3 87 174 2 80 5.64e-13 70.1
Msa0845490 AT3G04430.1 33.835 133 74 5 20 140 6 136 7.40e-13 67.4
Msa0845490 AT5G22290.2 39.560 91 36 4 93 180 2 76 1.23e-11 64.7

Find 83 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATGTTGTTTGAACAAAAT+TGG 0.184460 5_4:+24674447 None:intergenic
TAACATCTACATCAAAATTT+TGG 0.208775 5_4:+24674369 None:intergenic
AAGTTATCTTACCAGGATTT+AGG 0.220891 5_4:-24676362 Msa0845490:CDS
GAAACAGTGCAAGGCCTAAT+AGG 0.247551 5_4:-24675581 Msa0845490:CDS
TGAAACATCCATTGTAGATT+TGG 0.251668 5_4:+24674205 None:intergenic
TTTGTTGAACCTTTCTCTTT+AGG 0.261897 5_4:+24676304 None:intergenic
GGACTAATAATGGATTTATA+AGG 0.264927 5_4:+24674344 None:intergenic
GGGTAACTGGAGCTGGATTC+TGG 0.266844 5_4:-24675560 Msa0845490:CDS
CCAATGCATTATTATCATAT+TGG 0.276292 5_4:+24674048 None:intergenic
GTGTAGTAATGGACTAATAA+TGG 0.280115 5_4:+24674334 None:intergenic
ACATTCACATTAACATTATA+AGG 0.303980 5_4:+24674017 None:intergenic
ATTAAGATCTTCATTTGAAA+TGG 0.325590 5_4:+24674292 None:intergenic
CATGGAAGTCAAATTTGCTT+TGG 0.326417 5_4:-24673947 Msa0845490:CDS
GAATTGATGAATTTCAATAT+TGG 0.333275 5_4:-24673975 Msa0845490:CDS
GACTAATAATGGATTTATAA+GGG 0.345533 5_4:+24674345 None:intergenic
AAAGAGCTTTGTCGCACTCT+TGG 0.364489 5_4:-24674529 Msa0845490:CDS
GCAAGGCCTAATAGGGTAAC+TGG 0.368447 5_4:-24675573 Msa0845490:CDS
GAACCTTCTGAGGAGTAGAT+AGG 0.383654 5_4:+24675516 None:intergenic
CAACTGATGAAGAGCTTGTT+GGG 0.385394 5_4:-24676332 Msa0845490:CDS
CATTTAACATGCAGGAATCA+TGG 0.386576 5_4:-24674592 Msa0845490:intron
AAGAGCTTTGTCGCACTCTT+GGG 0.388323 5_4:-24674528 Msa0845490:CDS
TAACTAGAGGGAACATCAAT+AGG 0.388427 5_4:+24673909 None:intergenic
AAAAGACTAAGGATTTCTTT+AGG 0.389485 5_4:+24675481 None:intergenic
ATGGAAGTCAAATTTGCTTT+GGG 0.392121 5_4:-24673946 Msa0845490:CDS
CATGTTGTTTGAACAAAATT+GGG 0.393384 5_4:+24674448 None:intergenic
CCAGCTCCAGTTACCCTATT+AGG 0.395888 5_4:+24675567 None:intergenic
ATAATATTATTGTTAGTGTT+AGG 0.401199 5_4:+24674230 None:intergenic
TCTTCCTTTGTAAAAGACTA+AGG 0.405196 5_4:+24675470 None:intergenic
TGATAATAATGCATTGGTTA+AGG 0.409165 5_4:-24674042 Msa0845490:CDS
CCAACTGATGAAGAGCTTGT+TGG 0.413211 5_4:-24676333 Msa0845490:CDS
TAGAGGTTCTTGTTTCAGAT+AGG 0.422193 5_4:+24674498 None:intergenic
TTAAGATCTTCATTTGAAAT+GGG 0.432687 5_4:+24674293 None:intergenic
ACAACTACAAATTTCATGAA+TGG 0.443610 5_4:-24674116 Msa0845490:CDS
AGTGACTACTCATTACCATT+TGG 0.444946 5_4:-24674074 Msa0845490:CDS
AAGTACTTCTTTGGTGAAAG+TGG 0.447802 5_4:+24675384 None:intergenic
CTTGATGAAGTTATCTTACC+AGG 0.449714 5_4:-24676369 Msa0845490:CDS
AAACAGTGCAAGGCCTAATA+GGG 0.452535 5_4:-24675580 Msa0845490:CDS
GCTGGATTCTGGAAAGCTAC+AGG 0.462218 5_4:-24675549 Msa0845490:CDS
TTTCTTTAGGCCAATGCACT+TGG 0.465693 5_4:+24675494 None:intergenic
CCTAATAGGGTAACTGGAGC+TGG 0.468839 5_4:-24675567 Msa0845490:CDS
ACTTTCACCAAAGAAGTACT+TGG 0.472752 5_4:-24675382 Msa0845490:CDS
ACTGGATGATGCATGAGTTC+AGG 0.474694 5_4:-24675425 Msa0845490:CDS
GTCTTACTTGGAAGATCCCA+TGG 0.475315 5_4:+24676231 None:intergenic
TTATCATATTGGTTACCAAA+TGG 0.477245 5_4:+24674059 None:intergenic
TACAAAGGAAGAGCTGCTAA+AGG 0.482478 5_4:-24675459 Msa0845490:CDS
TTTACTCACATTAGCAGGAA+TGG 0.491109 5_4:+24675353 None:intergenic
TGTGCAGAGTTTGCAAGTAC+AGG 0.496161 5_4:-24675648 Msa0845490:intron
ACTACAAATTTCATGAATGG+TGG 0.505591 5_4:-24674113 Msa0845490:CDS
ATATCTATAAATATGATCCA+TGG 0.506117 5_4:-24676248 Msa0845490:CDS
AGAGGTTCTTGTTTCAGATA+GGG 0.509009 5_4:+24674499 None:intergenic
GTTAAAATCACCAAGCATTG+AGG 0.509367 5_4:+24674157 None:intergenic
GATATGGAAGAAAGAAATGA+TGG 0.515202 5_4:-24676399 Msa0845490:CDS
GTTGGATGAAACCTAAATCC+TGG 0.518377 5_4:+24676351 None:intergenic
CTACAAATTTCATGAATGGT+GGG 0.522679 5_4:-24674112 Msa0845490:CDS
AATGCACTTGGAACCTTCTG+AGG 0.523326 5_4:+24675506 None:intergenic
CTAAAGGAATCAAAACTGAC+TGG 0.527746 5_4:-24675443 Msa0845490:CDS
ATTTAACATGCAGGAATCAT+GGG 0.529236 5_4:-24674591 Msa0845490:intron
ATTCAAGAAAACAAATTCTA+CGG 0.534890 5_4:-24674555 Msa0845490:CDS
GAAAGTGGATCTATGAGAGA+AGG 0.536482 5_4:+24675399 None:intergenic
TGAAATGGGCAAGTGATGAA+AGG 0.539070 5_4:+24674307 None:intergenic
ATTGACAAAGAATACATCCT+TGG 0.542699 5_4:-24674423 Msa0845490:CDS
CCAATATGATAATAATGCAT+TGG 0.542771 5_4:-24674048 Msa0845490:CDS
TATTATTTCCAAATCTACAA+TGG 0.548647 5_4:-24674213 Msa0845490:CDS
TCAGAAGGTTCCAAGTGCAT+TGG 0.555187 5_4:-24675504 Msa0845490:CDS
CCAACAAGCTCTTCATCAGT+TGG 0.559889 5_4:+24676333 None:intergenic
CATTGTTGTTAGTGTAGAAG+TGG 0.564435 5_4:+24674396 None:intergenic
ATGTCATCATCCTCAATGCT+TGG 0.574915 5_4:-24674167 Msa0845490:CDS
CAAGTACAGGAGAGAAAGAG+TGG 0.578025 5_4:-24675635 Msa0845490:CDS
ATTTCAATATTGGTGATGCA+TGG 0.583124 5_4:-24673965 Msa0845490:CDS
TATCTATAAATATGATCCAT+GGG 0.583366 5_4:-24676247 Msa0845490:CDS
ACTAATAATGGATTTATAAG+GGG 0.586489 5_4:+24674346 None:intergenic
AAACCTATCTACTCCTCAGA+AGG 0.590506 5_4:-24675519 Msa0845490:CDS
CTGGATTCTGGAAAGCTACA+GGG 0.596618 5_4:-24675548 Msa0845490:CDS
GTTGTTAGTGTAGAAGTGGT+TGG 0.597687 5_4:+24674400 None:intergenic
CTTGGTTGTTGAATAACTAG+AGG 0.600536 5_4:+24673896 None:intergenic
TTAGTGTTAGGTGTTTCAAG+TGG 0.617822 5_4:+24674242 None:intergenic
TACAAATTAAGTGTAACACT+TGG 0.625059 5_4:+24673878 None:intergenic
TTGGTTGTTGAATAACTAGA+GGG 0.629756 5_4:+24673897 None:intergenic
AGTGTAGAAGTGGTTGGCCA+AGG 0.630212 5_4:+24674406 None:intergenic
GAAAATACAGAAACAGTGCA+AGG 0.653407 5_4:-24675590 Msa0845490:CDS
TAAAGAGAAAGGTTCAACAA+AGG 0.656075 5_4:-24676302 Msa0845490:CDS
AATTCTTGTTCATCAATACG+AGG 0.699073 5_4:+24673993 None:intergenic
TTGATGAGCTCAATAGACAG+AGG 0.712731 5_4:+24676279 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATT+AGG + chr5_4:24675200-24675219 None:intergenic 0.0%
!!! ATTTTTTAAGGATTTAAAAA+AGG + chr5_4:24674548-24674567 None:intergenic 10.0%
!! ACCAATCAATTAATTAAATA+AGG - chr5_4:24675408-24675427 Msa0845490:CDS 15.0%
!! CCAATCAATTAATTAAATAA+GGG - chr5_4:24675409-24675428 Msa0845490:CDS 15.0%
!! ATAATATTATTGTTAGTGTT+AGG + chr5_4:24676053-24676072 None:intergenic 15.0%
!! ATATCTATAAATATGATCCA+TGG - chr5_4:24674032-24674051 Msa0845490:CDS 20.0%
!! TATCTATAAATATGATCCAT+GGG - chr5_4:24674033-24674052 Msa0845490:CDS 20.0%
!! ATTCTTCATAATATCAAGAA+TGG + chr5_4:24675012-24675031 None:intergenic 20.0%
!! TATTAATTAGTTGAAAGTAG+TGG - chr5_4:24675366-24675385 Msa0845490:CDS 20.0%
!!! CCCTTATTTAATTAATTGAT+TGG + chr5_4:24675412-24675431 None:intergenic 20.0%
!! GAAAAAAGTTAATAATGAGA+TGG - chr5_4:24675439-24675458 Msa0845490:CDS 20.0%
!! ATTCAAGAAAACAAATTCTA+CGG - chr5_4:24675725-24675744 Msa0845490:intron 20.0%
!!! TAACATCTACATCAAAATTT+TGG + chr5_4:24675914-24675933 None:intergenic 20.0%
!!! ACTAATAATGGATTTATAAG+GGG + chr5_4:24675937-24675956 None:intergenic 20.0%
!!! GACTAATAATGGATTTATAA+GGG + chr5_4:24675938-24675957 None:intergenic 20.0%
!!! TTAAGATCTTCATTTGAAAT+GGG + chr5_4:24675990-24676009 None:intergenic 20.0%
!! ATTAAGATCTTCATTTGAAA+TGG + chr5_4:24675991-24676010 None:intergenic 20.0%
!! TATTATTTCCAAATCTACAA+TGG - chr5_4:24676067-24676086 Msa0845490:intron 20.0%
!! ACATTCACATTAACATTATA+AGG + chr5_4:24676266-24676285 None:intergenic 20.0%
!! GAATTGATGAATTTCAATAT+TGG - chr5_4:24676305-24676324 Msa0845490:CDS 20.0%
! AGACACTTAAATATCTTTGT+TGG - chr5_4:24674073-24674092 Msa0845490:CDS 25.0%
!! TTTGAAAAAAGTGCGATAAA+GGG + chr5_4:24674115-24674134 None:intergenic 25.0%
!!! TAAGATATTTCTAGTCAAAC+TGG - chr5_4:24674213-24674232 Msa0845490:CDS 25.0%
!! TTTAAGGTAATAACCTAGTT+GGG - chr5_4:24674242-24674261 Msa0845490:CDS 25.0%
! TATTGCATCAGAAAAAAGAA+GGG + chr5_4:24674594-24674613 None:intergenic 25.0%
! ATATTGCATCAGAAAAAAGA+AGG + chr5_4:24674595-24674614 None:intergenic 25.0%
! AAAAGACTAAGGATTTCTTT+AGG + chr5_4:24674802-24674821 None:intergenic 25.0%
!!! AAATCCTTAGTCTTTTACAA+AGG - chr5_4:24674806-24674825 Msa0845490:intron 25.0%
! GCTAAGATAATGATAAAGTT+TGG + chr5_4:24674960-24674979 None:intergenic 25.0%
! AAATGTCAAAATTACTAGAC+TGG + chr5_4:24675306-24675325 None:intergenic 25.0%
! CAATTAATTAAATAAGGGTG+TGG - chr5_4:24675414-24675433 Msa0845490:CDS 25.0%
! AAAAGTTAATAATGAGATGG+CGG - chr5_4:24675442-24675461 Msa0845490:CDS 25.0%
! ACAGCGTAAAAAAATCTTTA+CGG - chr5_4:24675579-24675598 Msa0845490:CDS 25.0%
!! AAATTGGTTTCAAGTGTTTA+TGG - chr5_4:24675636-24675655 Msa0845490:CDS 25.0%
!! CATGTTGTTTGAACAAAATT+GGG + chr5_4:24675835-24675854 None:intergenic 25.0%
!! ACATGTTGTTTGAACAAAAT+TGG + chr5_4:24675836-24675855 None:intergenic 25.0%
!!! GGACTAATAATGGATTTATA+AGG + chr5_4:24675939-24675958 None:intergenic 25.0%
! ACAACTACAAATTTCATGAA+TGG - chr5_4:24676164-24676183 Msa0845490:intron 25.0%
!! TTATCATATTGGTTACCAAA+TGG + chr5_4:24676224-24676243 None:intergenic 25.0%
! CCAATGCATTATTATCATAT+TGG + chr5_4:24676235-24676254 None:intergenic 25.0%
! CCAATATGATAATAATGCAT+TGG - chr5_4:24676232-24676251 Msa0845490:intron 25.0%
!!! TGATAATAATGCATTGGTTA+AGG - chr5_4:24676238-24676257 Msa0845490:CDS 25.0%
AAGTTATCTTACCAGGATTT+AGG - chr5_4:24673918-24673937 Msa0845490:CDS 30.0%
TTTGTTGAACCTTTCTCTTT+AGG + chr5_4:24673979-24673998 None:intergenic 30.0%
TAAAGAGAAAGGTTCAACAA+AGG - chr5_4:24673978-24673997 Msa0845490:CDS 30.0%
TTTAAGTGTCTTGTCTTACT+TGG + chr5_4:24674064-24674083 None:intergenic 30.0%
! GTTTGAAAAAAGTGCGATAA+AGG + chr5_4:24674116-24674135 None:intergenic 30.0%
! ATTAAGTTGTTTGCTCAAAG+AGG + chr5_4:24674148-24674167 None:intergenic 30.0%
! GTTTAAGGTAATAACCTAGT+TGG - chr5_4:24674241-24674260 Msa0845490:CDS 30.0%
!! GTTATTTTCATCAGTTATCC+TGG - chr5_4:24674327-24674346 Msa0845490:CDS 30.0%
TTATCATAGCTTATGGAAAG+TGG + chr5_4:24674399-24674418 None:intergenic 30.0%
ACACTGTTTATCATAGCTTA+TGG + chr5_4:24674406-24674425 None:intergenic 30.0%
!!! AGTGCTTAAGGCATTTTTTA+AGG + chr5_4:24674560-24674579 None:intergenic 30.0%
! TTTCTGTATTTTCTGTCTCT+TGG + chr5_4:24674683-24674702 None:intergenic 30.0%
TCTTCCTTTGTAAAAGACTA+AGG + chr5_4:24674813-24674832 None:intergenic 30.0%
!! AACTCATGCTATTTCAACAT+TGG - chr5_4:24675045-24675064 Msa0845490:intron 30.0%
GTCAGTTAAACTAGAACTTA+TGG - chr5_4:24675328-24675347 Msa0845490:intron 30.0%
AAAGTTAATAATGAGATGGC+GGG - chr5_4:24675443-24675462 Msa0845490:CDS 30.0%
! TATAAACGATGGTGATTTGT+CGG + chr5_4:24675483-24675502 None:intergenic 30.0%
AAAGTCACACATATAAACGA+TGG + chr5_4:24675494-24675513 None:intergenic 30.0%
!!! CAAATATTTTAACGATCTGC+TGG - chr5_4:24675543-24675562 Msa0845490:CDS 30.0%
! TAACTTGTCATTTAACATGC+AGG - chr5_4:24675680-24675699 Msa0845490:intron 30.0%
ATTTAACATGCAGGAATCAT+GGG - chr5_4:24675689-24675708 Msa0845490:intron 30.0%
!!! ATTTTTGGTTAGCATGTTAG+AGG + chr5_4:24675802-24675821 None:intergenic 30.0%
! TTGGGTGATTTCTTGATTTT+TGG + chr5_4:24675817-24675836 None:intergenic 30.0%
ATTGACAAAGAATACATCCT+TGG - chr5_4:24675857-24675876 Msa0845490:intron 30.0%
!! GTGTAGTAATGGACTAATAA+TGG + chr5_4:24675949-24675968 None:intergenic 30.0%
!! TGAAAGGTTTTGTGTAGTAA+TGG + chr5_4:24675960-24675979 None:intergenic 30.0%
TGAAACATCCATTGTAGATT+TGG + chr5_4:24676078-24676097 None:intergenic 30.0%
! TTTTAACAAGACATGTGATG+AGG - chr5_4:24676139-24676158 Msa0845490:intron 30.0%
ACTACAAATTTCATGAATGG+TGG - chr5_4:24676167-24676186 Msa0845490:intron 30.0%
CTACAAATTTCATGAATGGT+GGG - chr5_4:24676168-24676187 Msa0845490:intron 30.0%
AATTCTTGTTCATCAATACG+AGG + chr5_4:24676290-24676309 None:intergenic 30.0%
!! ATTTCAATATTGGTGATGCA+TGG - chr5_4:24676315-24676334 Msa0845490:CDS 30.0%
! ATGGAAGTCAAATTTGCTTT+GGG - chr5_4:24676334-24676353 Msa0845490:CDS 30.0%
TTGGTTGTTGAATAACTAGA+GGG + chr5_4:24676386-24676405 None:intergenic 30.0%
CTTGATGAAGTTATCTTACC+AGG - chr5_4:24673911-24673930 Msa0845490:CDS 35.0%
! TGGGTTTTACCTAAAGAGAA+AGG - chr5_4:24673967-24673986 Msa0845490:CDS 35.0%
GTCAAACTGGTAACAGTTTA+AGG - chr5_4:24674226-24674245 Msa0845490:CDS 35.0%
AAATGCTAACAAGTTCCCTA+AGG - chr5_4:24674433-24674452 Msa0845490:CDS 35.0%
AATGCTAACAAGTTCCCTAA+GGG - chr5_4:24674434-24674453 Msa0845490:CDS 35.0%
GTTATGCTAACAAGTGCTTA+AGG + chr5_4:24674572-24674591 None:intergenic 35.0%
GAAAATACAGAAACAGTGCA+AGG - chr5_4:24674690-24674709 Msa0845490:intron 35.0%
CTAAAGGAATCAAAACTGAC+TGG - chr5_4:24674837-24674856 Msa0845490:intron 35.0%
AAGTACTTCTTTGGTGAAAG+TGG + chr5_4:24674899-24674918 None:intergenic 35.0%
!! ACTTTCACCAAAGAAGTACT+TGG - chr5_4:24674898-24674917 Msa0845490:intron 35.0%
! GTTTTCTCCAAGTACTTCTT+TGG + chr5_4:24674908-24674927 None:intergenic 35.0%
TTTACTCACATTAGCAGGAA+TGG + chr5_4:24674930-24674949 None:intergenic 35.0%
! TGAGTTTTACTCACATTAGC+AGG + chr5_4:24674935-24674954 None:intergenic 35.0%
! ATCAAGAATGGTAATGTGAG+AGG + chr5_4:24675000-24675019 None:intergenic 35.0%
GTTGATTGACGAAATGACAA+AGG - chr5_4:24675221-24675240 Msa0845490:intron 35.0%
TTAGTTGAAAGTAGTGGTAG+TGG - chr5_4:24675372-24675391 Msa0845490:CDS 35.0%
!! GTAGTGGTAGTGGAATAATT+AGG - chr5_4:24675382-24675401 Msa0845490:CDS 35.0%
CATTTAACATGCAGGAATCA+TGG - chr5_4:24675688-24675707 Msa0845490:intron 35.0%
! AGAGGTTCTTGTTTCAGATA+GGG + chr5_4:24675784-24675803 None:intergenic 35.0%
! TAGAGGTTCTTGTTTCAGAT+AGG + chr5_4:24675785-24675804 None:intergenic 35.0%
! CATTGTTGTTAGTGTAGAAG+TGG + chr5_4:24675887-24675906 None:intergenic 35.0%
TTAGTGTTAGGTGTTTCAAG+TGG + chr5_4:24676041-24676060 None:intergenic 35.0%
! GTTAAAATCACCAAGCATTG+AGG + chr5_4:24676126-24676145 None:intergenic 35.0%
AGTGACTACTCATTACCATT+TGG - chr5_4:24676206-24676225 Msa0845490:intron 35.0%
! CATGGAAGTCAAATTTGCTT+TGG - chr5_4:24676333-24676352 Msa0845490:CDS 35.0%
TAACTAGAGGGAACATCAAT+AGG + chr5_4:24676374-24676393 None:intergenic 35.0%
CTTGGTTGTTGAATAACTAG+AGG + chr5_4:24676387-24676406 None:intergenic 35.0%
GTTGGATGAAACCTAAATCC+TGG + chr5_4:24673932-24673951 None:intergenic 40.0%
! CAACTGATGAAGAGCTTGTT+GGG - chr5_4:24673948-24673967 Msa0845490:CDS 40.0%
TTGATGAGCTCAATAGACAG+AGG + chr5_4:24674004-24674023 None:intergenic 40.0%
TTTATCTCCATAAGCTCTCC+AGG + chr5_4:24674348-24674367 None:intergenic 40.0%
CTTCTTATCAAGTGCCCTTA+GGG + chr5_4:24674451-24674470 None:intergenic 40.0%
AAACAGTGCAAGGCCTAATA+GGG - chr5_4:24674700-24674719 Msa0845490:intron 40.0%
AAACCTATCTACTCCTCAGA+AGG - chr5_4:24674761-24674780 Msa0845490:intron 40.0%
TTTCTTTAGGCCAATGCACT+TGG + chr5_4:24674789-24674808 None:intergenic 40.0%
TACAAAGGAAGAGCTGCTAA+AGG - chr5_4:24674821-24674840 Msa0845490:intron 40.0%
GAAAGTGGATCTATGAGAGA+AGG + chr5_4:24674884-24674903 None:intergenic 40.0%
! GAATGGTAATGTGAGAGGAT+TGG + chr5_4:24674995-24675014 None:intergenic 40.0%
ATAAACTCACTCACGCAAAG+TGG - chr5_4:24675248-24675267 Msa0845490:intron 40.0%
GTTGTTAGTGTAGAAGTGGT+TGG + chr5_4:24675883-24675902 None:intergenic 40.0%
TGAAATGGGCAAGTGATGAA+AGG + chr5_4:24675976-24675995 None:intergenic 40.0%
ATGTCATCATCCTCAATGCT+TGG - chr5_4:24676113-24676132 Msa0845490:intron 40.0%
CCAACAAGCTCTTCATCAGT+TGG + chr5_4:24673950-24673969 None:intergenic 45.0%
CCAACTGATGAAGAGCTTGT+TGG - chr5_4:24673947-24673966 Msa0845490:CDS 45.0%
GTCTTACTTGGAAGATCCCA+TGG + chr5_4:24674052-24674071 None:intergenic 45.0%
AGCATGCTAACATCCCAACT+AGG + chr5_4:24674258-24674277 None:intergenic 45.0%
CAGTTATCCTGGAGAGCTTA+TGG - chr5_4:24674338-24674357 Msa0845490:CDS 45.0%
GCTTCTTATCAAGTGCCCTT+AGG + chr5_4:24674452-24674471 None:intergenic 45.0%
TGTGCAGAGTTTGCAAGTAC+AGG - chr5_4:24674632-24674651 Msa0845490:intron 45.0%
CAAGTACAGGAGAGAAAGAG+TGG - chr5_4:24674645-24674664 Msa0845490:intron 45.0%
GAAACAGTGCAAGGCCTAAT+AGG - chr5_4:24674699-24674718 Msa0845490:intron 45.0%
! CTGGATTCTGGAAAGCTACA+GGG - chr5_4:24674732-24674751 Msa0845490:intron 45.0%
! GAACCTTCTGAGGAGTAGAT+AGG + chr5_4:24674767-24674786 None:intergenic 45.0%
AATGCACTTGGAACCTTCTG+AGG + chr5_4:24674777-24674796 None:intergenic 45.0%
TCAGAAGGTTCCAAGTGCAT+TGG - chr5_4:24674776-24674795 Msa0845490:intron 45.0%
ACTGGATGATGCATGAGTTC+AGG - chr5_4:24674855-24674874 Msa0845490:intron 45.0%
ATTTGTCGGCAGTGTCATCA+AGG + chr5_4:24675469-24675488 None:intergenic 45.0%
! AAAGAGCTTTGTCGCACTCT+TGG - chr5_4:24675751-24675770 Msa0845490:intron 45.0%
! AAGAGCTTTGTCGCACTCTT+GGG - chr5_4:24675752-24675771 Msa0845490:intron 45.0%
!!! TTTTTAAAAACAATAAAAAT+TGG - chr5_4:24675620-24675639 Msa0845490:CDS 5.0%
GCAAGGCCTAATAGGGTAAC+TGG - chr5_4:24674707-24674726 Msa0845490:intron 50.0%
CCAGCTCCAGTTACCCTATT+AGG + chr5_4:24674716-24674735 None:intergenic 50.0%
CCTAATAGGGTAACTGGAGC+TGG - chr5_4:24674713-24674732 Msa0845490:intron 50.0%
! GCTGGATTCTGGAAAGCTAC+AGG - chr5_4:24674731-24674750 Msa0845490:intron 50.0%
AACTCACTCACGCAAAGTGG+AGG - chr5_4:24675251-24675270 Msa0845490:intron 50.0%
TAGACTGGACGTCATGCTTG+GGG + chr5_4:24675291-24675310 None:intergenic 50.0%
CTAGACTGGACGTCATGCTT+GGG + chr5_4:24675292-24675311 None:intergenic 50.0%
ACTAGACTGGACGTCATGCT+TGG + chr5_4:24675293-24675312 None:intergenic 50.0%
! AGTGTAGAAGTGGTTGGCCA+AGG + chr5_4:24675877-24675896 None:intergenic 50.0%
GGGTAACTGGAGCTGGATTC+TGG - chr5_4:24674720-24674739 Msa0845490:intron 55.0%
TCACTCACGCAAAGTGGAGG+TGG - chr5_4:24675254-24675273 Msa0845490:intron 55.0%
TCACGCAAAGTGGAGGTGGT+AGG - chr5_4:24675258-24675277 Msa0845490:intron 55.0%
CACGCAAAGTGGAGGTGGTA+GGG - chr5_4:24675259-24675278 Msa0845490:intron 55.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 24673884 24676418 24673884 ID=Msa0845490;Name=Msa0845490
chr5_4 mRNA 24673884 24676418 24673884 ID=Msa0845490-mRNA-1;Parent=Msa0845490;Name=Msa0845490-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|3|0|399
chr5_4 exon 24676238 24676418 24676238 ID=Msa0845490-mRNA-1:exon:9897;Parent=Msa0845490-mRNA-1
chr5_4 exon 24675362 24675663 24675362 ID=Msa0845490-mRNA-1:exon:9896;Parent=Msa0845490-mRNA-1
chr5_4 exon 24673884 24674600 24673884 ID=Msa0845490-mRNA-1:exon:9895;Parent=Msa0845490-mRNA-1
chr5_4 CDS 24676238 24676418 24676238 ID=Msa0845490-mRNA-1:cds;Parent=Msa0845490-mRNA-1
chr5_4 CDS 24675362 24675663 24675362 ID=Msa0845490-mRNA-1:cds;Parent=Msa0845490-mRNA-1
chr5_4 CDS 24673884 24674600 24673884 ID=Msa0845490-mRNA-1:cds;Parent=Msa0845490-mRNA-1
Gene Sequence

>Msa0845490

ATGGAAGAAAGAAATGATGGTGAAAAACTTGATGAAGTTATCTTACCAGGATTTAGGTTTCATCCAACTGATGAAGAGCTTGTTGGGTTTTACCTAAAGAGAAAGGTTCAACAAAGGCCTCTGTCTATTGAGCTCATCAAGCAGCTTGATATCTATAAATATGATCCATGGGATCTTCCAAAGTTTGCAAGTACAGGAGAGAAAGAGTGGTATTTCTACTGTCCAAGAGACAGAAAATACAGAAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGATTCTGGAAAGCTACAGGGACAGATAAACCTATCTACTCCTCAGAAGGTTCCAAGTGCATTGGCCTAAAGAAATCCTTAGTCTTTTACAAAGGAAGAGCTGCTAAAGGAATCAAAACTGACTGGATGATGCATGAGTTCAGGCTACCTTCTCTCATAGATCCACTTTCACCAAAGAAGTACTTGGAGAAAACCATTCCTGCTAATGAATCATGGGCTATCTGTAGAATATTCAAGAAAACAAATTCTACGGCTCAAAGAGCTTTGTCGCACTCTTGGGTTTCTTCCCTATCTGAAACAAGAACCTCTAACATGCTAACCAAAAATCAAGAAATCACCCAATTTTGTTCAAACAACATGTCATTGACAAAGAATACATCCTTGGCCAACCACTTCTACACTAACAACAATGATAGCCAAAATTTTGATGTAGATGTTACCCCTTATAAATCCATTATTAGTCCATTACTACACAAAACCTTTCATCACTTGCCCATTTCAAATGAAGATCTTAATACAAGCTTGATATTCTCATCATCATCTCCACTTGAAACACCTAACACTAACAATAATATTATTTCCAAATCTACAATGGATGTTTCATCAATGTTATTGAATATGTCATCATCCTCAATGCTTGGTGATTTTAACAAGACATGTGATGAGGTTACAACTACAAATTTCATGAATGGTGGGTTGCAAGAGCAATTTAGTGACTACTCATTACCATTTGGTAACCAATATGATAATAATGCATTGGTTAAGGTACCTTATAATGTTAATGTGAATGTGCCTCGTATTGATGAACAAGAATTGATGAATTTCAATATTGGTGATGCATGGAAGTCAAATTTGCTTTGGGATACTTCATTTTGTCCTATTGATGTTCCCTCTAGTTATTCAACAACCAAGTGTTACACTTAA
Protein sequence

>Msa0845490

MEERNDGEKLDEVILPGFRFHPTDEELVGFYLKRKVQQRPLSIELIKQLDIYKYDPWDLPKFASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDKPIYSSEGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRLPSLIDPLSPKKYLEKTIPANESWAICRIFKKTNSTAQRALSHSWVSSLSETRTSNMLTKNQEITQFCSNNMSLTKNTSLANHFYTNNNDSQNFDVDVTPYKSIISPLLHKTFHHLPISNEDLNTSLIFSSSSPLETPNTNNNIISKSTMDVSSMLLNMSSSSMLGDFNKTCDEVTTTNFMNGGLQEQFSDYSLPFGNQYDNNALVKVPYNVNVNVPRIDEQELMNFNIGDAWKSNLLWDTSFCPIDVPSSYSTTKCYT*