AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0849850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0849850 MtrunA17_Chr5g0425261 91.557 379 24 2 1 376 1 374 0.0 706
Msa0849850 MtrunA17_Chr5g0424801 90.237 379 29 2 1 376 1 374 0.0 694
Msa0849850 MtrunA17_Chr5g0424741 54.916 417 135 8 1 367 1 414 3.28e-133 392
Msa0849850 MtrunA17_Chr5g0424931 54.177 395 140 9 1 364 8 392 3.56e-130 384
Msa0849850 MtrunA17_Chr1g0178011 53.806 381 140 10 1 364 1 362 9.03e-121 358
Msa0849850 MtrunA17_Chr2g0289221 52.367 338 125 14 1 321 9 327 4.30e-98 296
Msa0849850 MtrunA17_Chr5g0417281 49.112 338 149 8 8 335 7 331 9.08e-97 298
Msa0849850 MtrunA17_Chr2g0277461 45.312 384 179 14 6 374 7 374 3.79e-90 279
Msa0849850 MtrunA17_Chr5g0417211 51.506 332 126 11 1 315 1 314 9.55e-90 277
Msa0849850 MtrunA17_Chr5g0436761 45.665 346 159 10 6 336 6 337 3.17e-87 272
Msa0849850 MtrunA17_Chr2g0277531 44.099 322 151 12 6 315 14 318 1.30e-76 240
Msa0849850 MtrunA17_Chr3g0115271 35.714 378 181 10 9 336 16 381 2.94e-64 216
Msa0849850 MtrunA17_Chr5g0425661 58.163 196 66 7 12 195 37 228 7.32e-64 204
Msa0849850 MtrunA17_Chr1g0199681 35.049 408 193 15 9 361 91 481 2.79e-58 201
Msa0849850 MtrunA17_Chr1g0181211 36.253 411 191 14 9 360 24 422 4.26e-58 201
Msa0849850 MtrunA17_Chr2g0326761 35.092 379 185 12 9 336 8 376 4.84e-57 198
Msa0849850 MtrunA17_Chr4g0028971 35.385 390 184 13 9 340 9 388 5.52e-55 192
Msa0849850 MtrunA17_Chr5g0424791 66.901 142 43 2 61 200 12 151 1.10e-52 172
Msa0849850 MtrunA17_Chr7g0264171 30.617 405 190 13 9 341 28 413 6.14e-50 177
Msa0849850 MtrunA17_Chr7g0264161 32.704 318 172 11 22 315 2 301 6.20e-42 149
Msa0849850 MtrunA17_Chr2g0282961 29.897 388 228 15 4 364 43 413 1.42e-41 154
Msa0849850 MtrunA17_Chr5g0425651 63.393 112 40 1 227 338 1 111 1.02e-40 140
Msa0849850 MtrunA17_Chr4g0009751 28.691 359 236 8 12 358 19 369 2.66e-38 145
Msa0849850 MtrunA17_Chr2g0276781 28.497 386 231 10 12 371 23 389 3.98e-38 145
Msa0849850 MtrunA17_Chr7g0239061 28.611 360 238 8 12 359 14 366 3.99e-37 142
Msa0849850 MtrunA17_Chr8g0385791 29.586 338 219 8 12 335 59 391 4.03e-36 140
Msa0849850 MtrunA17_Chr2g0285461 29.942 344 218 10 9 335 20 357 7.21e-36 139
Msa0849850 MtrunA17_Chr4g0046371 29.793 386 224 15 12 369 38 404 2.10e-35 138
Msa0849850 MtrunA17_Chr8g0346711 29.000 400 258 12 12 398 29 415 2.75e-35 137
Msa0849850 MtrunA17_Chr4g0070181 28.779 344 220 10 9 335 20 355 8.37e-33 130
Msa0849850 MtrunA17_Chr5g0433301 29.619 341 217 10 12 335 24 358 8.90e-33 130
Msa0849850 MtrunA17_Chr2g0301251 29.360 344 218 11 9 335 20 355 9.78e-33 130
Msa0849850 MtrunA17_Chr1g0156321 30.205 341 214 11 12 335 43 376 1.65e-32 129
Msa0849850 MtrunA17_Chr8g0376771 28.531 354 209 12 9 335 20 356 4.18e-32 128
Msa0849850 MtrunA17_Chr3g0109391 29.326 341 218 10 12 335 26 360 1.16e-31 127
Msa0849850 MtrunA17_Chr8g0389081 28.291 357 207 11 9 335 29 366 3.41e-28 117
Msa0849850 MtrunA17_Chr2g0326281 28.710 411 232 16 12 376 56 451 4.55e-28 116
Msa0849850 MtrunA17_Chr4g0029671 28.462 390 236 15 12 371 54 430 1.24e-27 115
Msa0849850 MtrunA17_Chr5g0419861 35.897 117 69 3 50 160 12 128 2.30e-14 69.7
Msa0849850 MtrunA17_Chr8g0356211 26.316 228 135 9 125 335 9 220 4.38e-14 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0849850 AT1G77850.2 35.121 373 187 12 9 336 16 378 4.62e-64 216
Msa0849850 AT1G77850.1 35.027 374 188 12 8 336 15 378 4.71e-64 215
Msa0849850 AT4G30080.1 35.806 391 190 14 9 347 16 397 1.31e-54 191
Msa0849850 AT2G28350.2 33.503 394 187 14 9 340 7 387 3.10e-52 185
Msa0849850 AT2G28350.1 33.503 394 187 14 9 340 7 387 3.49e-52 185
Msa0849850 AT2G46530.1 30.328 366 229 8 12 361 21 376 1.19e-43 160
Msa0849850 AT2G46530.3 30.328 366 229 8 12 361 42 397 1.20e-43 160
Msa0849850 AT3G61830.1 30.857 350 210 11 12 342 25 361 8.51e-43 158
Msa0849850 AT1G34390.1 30.827 399 232 14 12 385 27 406 1.26e-40 152
Msa0849850 AT1G35520.1 31.707 410 218 17 12 386 27 409 1.93e-40 151
Msa0849850 AT1G59750.1 31.948 385 228 14 12 377 22 391 5.20e-40 151
Msa0849850 AT1G59750.3 31.948 385 228 14 12 377 22 391 5.20e-40 151
Msa0849850 AT1G59750.2 32.115 383 226 14 12 375 22 389 1.02e-39 150
Msa0849850 AT1G59750.4 31.967 366 218 13 12 358 22 375 3.32e-39 149
Msa0849850 AT1G34410.1 30.713 407 224 17 12 385 27 408 1.75e-38 146
Msa0849850 AT1G35540.1 31.127 408 221 19 12 385 27 408 1.34e-37 144
Msa0849850 AT1G34310.1 30.990 384 212 15 9 364 24 382 2.51e-37 143
Msa0849850 AT5G62000.2 29.107 347 209 10 12 335 61 393 3.14e-36 141
Msa0849850 AT5G62000.5 29.107 347 209 10 12 335 61 393 3.14e-36 141
Msa0849850 AT5G62000.3 29.107 347 209 10 12 335 61 393 3.14e-36 141
Msa0849850 AT5G62000.1 29.107 347 209 10 12 335 61 393 3.14e-36 141
Msa0849850 AT5G62000.4 29.107 347 209 10 12 335 61 393 3.36e-36 141
Msa0849850 AT4G23980.2 28.818 347 222 9 12 340 12 351 7.56e-36 139
Msa0849850 AT4G23980.1 28.818 347 222 9 12 340 12 351 8.11e-36 139
Msa0849850 AT1G35240.1 30.854 363 195 15 12 343 27 364 1.42e-35 138
Msa0849850 AT5G37020.2 30.814 344 209 13 12 335 22 356 1.02e-34 136
Msa0849850 AT1G30330.3 29.706 340 218 9 12 335 25 359 1.63e-34 136
Msa0849850 AT1G30330.2 29.706 340 218 9 12 335 25 359 1.63e-34 136
Msa0849850 AT5G37020.1 30.814 344 209 13 12 335 22 356 1.72e-34 136
Msa0849850 AT1G30330.1 29.706 340 218 9 12 335 23 357 1.76e-34 136
Msa0849850 AT1G34170.1 30.471 361 208 14 12 349 25 365 4.11e-34 133
Msa0849850 AT2G33860.1 29.888 358 214 12 12 347 54 396 2.18e-33 132
Msa0849850 AT1G19850.2 30.259 347 219 10 7 336 38 378 3.46e-31 126
Msa0849850 AT1G19850.1 30.259 347 219 10 7 336 49 389 3.72e-31 126
Msa0849850 AT1G19220.1 28.448 348 216 10 9 335 20 355 4.53e-31 126
Msa0849850 AT3G61830.2 30.769 299 180 9 59 342 24 310 2.53e-30 122
Msa0849850 AT5G20730.3 29.023 348 215 11 9 335 21 357 2.75e-30 124
Msa0849850 AT5G20730.1 29.023 348 215 11 9 335 21 357 3.29e-30 123
Msa0849850 AT5G20730.2 28.530 347 217 10 9 335 21 356 9.34e-30 122
Msa0849850 AT5G60450.1 29.060 351 212 13 12 335 65 405 4.73e-29 120
Msa0849850 AT5G60450.2 29.060 351 212 13 12 335 41 381 5.51e-29 119
Msa0849850 AT1G43950.1 32.843 204 117 6 12 203 27 222 5.12e-28 110
Msa0849850 AT1G34170.2 28.492 358 193 13 12 349 25 339 6.55e-28 115
Msa0849850 AT1G34170.3 28.492 358 193 13 12 349 25 339 1.21e-27 115
Msa0849850 AT2G46530.2 29.496 278 174 7 94 361 24 289 1.13e-24 106
Msa0849850 AT2G33860.2 29.435 248 153 9 112 347 2 239 8.08e-20 91.3
Msa0849850 AT5G37020.3 29.545 264 165 10 85 335 6 261 5.88e-18 86.7

Find 100 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCGCATATCTGCCATATTT+TGG 0.143600 5_4:-37708735 None:intergenic
ACCAAGTGAGATATCTTTAT+TGG 0.193551 5_4:+37710357 Msa0849850:CDS
TGTCTCCATCATCGTCTTCT+TGG 0.236516 5_4:-37709003 None:intergenic
AACTGATGAGATTAAGGTTT+TGG 0.252605 5_4:+37709363 Msa0849850:CDS
TAAACTTTAGAGTGAATCTT+TGG 0.260426 5_4:-37708776 None:intergenic
ATTCTTCTAATGTCCCTAAT+TGG 0.268826 5_4:+37709611 Msa0849850:CDS
TGACCCTGCCAAGGTTTGTT+GGG 0.288283 5_4:-37710241 None:intergenic
GATGACAATTTCTCAGCTTA+AGG 0.289847 5_4:+37709564 Msa0849850:CDS
GAATTTAACTGATGAGATTA+AGG 0.298587 5_4:+37709357 Msa0849850:CDS
TCACTTGGTGCTTGGCTCAT+TGG 0.299947 5_4:-37710343 None:intergenic
GATCTTTCCCAAGCTTGATT+TGG 0.300322 5_4:+37709105 Msa0849850:CDS
TGCCAAGGATTGACTAGGTT+TGG 0.313165 5_4:-37710123 None:intergenic
ACCTCAAGCATGCGCCAATT+AGG 0.318991 5_4:-37709625 None:intergenic
ATGAAGATTGGTTGGAAATC+TGG 0.337904 5_4:+37709493 Msa0849850:CDS
CTACTTCCCACGAGGTCATC+TGG 0.355762 5_4:+37708799 Msa0849850:CDS
CCTCAAGCATGCGCCAATTA+GGG 0.367711 5_4:-37709624 None:intergenic
TTGACCCTGCCAAGGTTTGT+TGG 0.368429 5_4:-37710242 None:intergenic
TTGGCATATCTGTGCAATAT+TGG 0.372671 5_4:+37710376 Msa0849850:CDS
TCCATCATCGTCTTCTTGGC+CGG 0.379595 5_4:-37708999 None:intergenic
AGATTTCCAACCAATCTTCA+TGG 0.383662 5_4:-37709491 None:intergenic
ATGACAATTTCTCAGCTTAA+GGG 0.392754 5_4:+37709565 Msa0849850:CDS
CTCGTGTGGAACCCAAAATA+TGG 0.402726 5_4:+37708723 Msa0849850:CDS
GCCGGGAACTACAGGAGGAG+GGG 0.417463 5_4:-37708981 None:intergenic
CGCTTCATCTGTAGTGAACT+TGG 0.424216 5_4:-37709320 None:intergenic
AATTCCGACAGATATCTTTC+CGG 0.425831 5_4:-37709287 None:intergenic
CTTGGTCAGTTACGGGAGTC+AGG 0.426329 5_4:-37708955 None:intergenic
TGGCCGGGAACTACAGGAGG+AGG 0.428083 5_4:-37708983 None:intergenic
CGACCTTAAAAGCCGAGAAT+GGG 0.441124 5_4:+37709153 Msa0849850:CDS
GACCCTGCCAAGGTTTGTTG+GGG 0.444536 5_4:-37710240 None:intergenic
GACTCGTCCAAATCAAGCTT+GGG 0.456946 5_4:-37709112 None:intergenic
GTGTATTATCCGACAGCTAT+TGG 0.461034 5_4:+37709427 Msa0849850:CDS
TCTTCTTGGCCGGGAACTAC+AGG 0.462528 5_4:-37708989 None:intergenic
CCATCATCGTCTTCTTGGCC+GGG 0.465753 5_4:-37708998 None:intergenic
TACGGGAGTCAGGAGCAGTT+TGG 0.469490 5_4:-37708945 None:intergenic
CCGGGAACTACAGGAGGAGG+GGG 0.475602 5_4:-37708980 None:intergenic
GTTGACGATGCCATGAAGAT+TGG 0.477758 5_4:+37709481 Msa0849850:CDS
CCCTGCCAAGGTTTGTTGGG+GGG 0.484811 5_4:-37710238 None:intergenic
GATGAAAACAACAGAATCGT+TGG 0.490573 5_4:-37709254 None:intergenic
AGACTCGTCCAAATCAAGCT+TGG 0.490804 5_4:-37709113 None:intergenic
GAAGATTCATATTTCTTCAA+AGG 0.492904 5_4:-37709532 None:intergenic
ATGGTTCTTGTGGCAGCAGT+AGG 0.493323 5_4:-37708839 None:intergenic
TTATCATAGGTTAACTGGGA+TGG 0.493859 5_4:+37710081 Msa0849850:intron
CCGACCTTAAAAGCCGAGAA+TGG 0.494002 5_4:+37709152 Msa0849850:CDS
GGCGGAGTTGACGGTGGAGG+AGG 0.496620 5_4:-37710181 None:intergenic
TGAGGCGGAGTTGACGGTGG+AGG 0.507469 5_4:-37710184 None:intergenic
ATCCAAACCTAGTCAATCCT+TGG 0.508187 5_4:+37710121 Msa0849850:CDS
CAACCTGCCAAGGATTGACT+AGG 0.513736 5_4:-37710128 None:intergenic
TGACTAGGTTTGGATTCTGT+GGG 0.514473 5_4:-37710113 None:intergenic
ACCCTGCCAAGGTTTGTTGG+GGG 0.514769 5_4:-37710239 None:intergenic
AAGATATCTCACTTGGTGCT+TGG 0.515083 5_4:-37710351 None:intergenic
GAGACGATGCATGGAATGGA+TGG 0.515792 5_4:-37708878 None:intergenic
TCATCCTCTGCCACCTCGTG+TGG 0.517268 5_4:+37708709 Msa0849850:CDS
TTGACTAGGTTTGGATTCTG+TGG 0.518023 5_4:-37710114 None:intergenic
AATCTCAGTAGATTACATAC+TGG 0.519388 5_4:+37709196 Msa0849850:CDS
CCCTAATTGGCGCATGCTTG+AGG 0.522896 5_4:+37709624 Msa0849850:CDS
GGTTCCACACGAGGTGGCAG+AGG 0.527487 5_4:-37708713 None:intergenic
GGAAGAGACGATGCATGGAA+TGG 0.530637 5_4:-37708882 None:intergenic
TGGTTCTTGTGGCAGCAGTA+GGG 0.533159 5_4:-37708838 None:intergenic
GATGAACTCTCAGCAAGTCT+AGG 0.537540 5_4:-37710216 None:intergenic
GAGGAGGAAGTCGAAGGTGC+AGG 0.538875 5_4:-37710165 None:intergenic
AGATATCTGTCGGAATTCGC+AGG 0.543135 5_4:+37709293 Msa0849850:CDS
ACTACAGATGAAGCGGATGA+AGG 0.543135 5_4:+37709328 Msa0849850:CDS
TTTGGATGCAGTGGAATTGG+CGG 0.544683 5_4:+37709381 Msa0849850:CDS
TTGTAAACTTCAACCTGCCA+AGG 0.544687 5_4:-37710138 None:intergenic
AAACCTAGTCAATCCTTGGC+AGG 0.546100 5_4:+37710125 Msa0849850:CDS
ACGATGCCATGAAGATTGGT+TGG 0.558168 5_4:+37709485 Msa0849850:CDS
GCCAATAAAGATATCTCACT+TGG 0.558384 5_4:-37710358 None:intergenic
TCAGTAGATTACATACTGGC+TGG 0.560711 5_4:+37709200 Msa0849850:CDS
CCCGGCCAAGAAGACGATGA+TGG 0.562611 5_4:+37708998 Msa0849850:CDS
GGTTCTTGTGGCAGCAGTAG+GGG 0.568653 5_4:-37708837 None:intergenic
ATTATCCGACAGCTATTGGT+TGG 0.574808 5_4:+37709431 Msa0849850:CDS
GGCCGGGAACTACAGGAGGA+GGG 0.579671 5_4:-37708982 None:intergenic
TGGACGGTAACGATCAAGAA+TGG 0.583957 5_4:-37708858 None:intergenic
CAAGTTCACTACAGATGAAG+CGG 0.584809 5_4:+37709321 Msa0849850:CDS
AAAATATGGCAGATATGCGC+CGG 0.589425 5_4:+37708737 Msa0849850:CDS
CAAACCTTGGCAGGGTCAAG+TGG 0.589963 5_4:+37710246 Msa0849850:CDS
TGACAATTTCTCAGCTTAAG+GGG 0.599563 5_4:+37709566 Msa0849850:CDS
TAATCTACTGAGATTTGCAT+AGG 0.604127 5_4:-37709188 None:intergenic
TCAACGGAAGAGACGATGCA+TGG 0.604313 5_4:-37708887 None:intergenic
AGTACCACTTGACCCTGCCA+AGG 0.606367 5_4:-37710250 None:intergenic
GCAAAGACCTCGTCGGTGTG+AGG 0.608714 5_4:-37708923 None:intergenic
GACCTTAAAAGCCGAGAATG+GGG 0.616896 5_4:+37709154 Msa0849850:CDS
CGATGCATGGAATGGATGGA+CGG 0.620709 5_4:-37708874 None:intergenic
ACAGATGAAGCGGATGAAGG+AGG 0.630115 5_4:+37709331 Msa0849850:CDS
ACGATCAAGAATGGTTCTTG+TGG 0.631537 5_4:-37708849 None:intergenic
TCTTGAGGCGGAGTTGACGG+TGG 0.632846 5_4:-37710187 None:intergenic
TCACGCCAACCAATAGCTGT+CGG 0.635734 5_4:-37709436 None:intergenic
TTGTGTGAGAGTCTTGACAT+AGG 0.637006 5_4:-37709035 None:intergenic
TCTGCCGGAAAGATATCTGT+CGG 0.642648 5_4:+37709283 Msa0849850:CDS
AGGATCAACAAAGAGATCAA+CGG 0.651533 5_4:-37708903 None:intergenic
ACCTTAAAAGCCGAGAATGG+GGG 0.652954 5_4:+37709155 Msa0849850:CDS
TGTTGATCCTCACACCGACG+AGG 0.655379 5_4:+37708916 Msa0849850:CDS
TCTTGGCCGGGAACTACAGG+AGG 0.657068 5_4:-37708986 None:intergenic
CAGTTTGGCAAAGACCTCGT+CGG 0.663811 5_4:-37708930 None:intergenic
AGGTGGCAGAGGATGAGACA+TGG 0.663852 5_4:-37708702 None:intergenic
ATCGAGTTAGAGCATTCGAT+AGG 0.670484 5_4:-37709085 None:intergenic
CATGTTCCAGATGACCTCGT+GGG 0.672658 5_4:-37708805 None:intergenic
GCATGTTCCAGATGACCTCG+TGG 0.672744 5_4:-37708806 None:intergenic
ACGGTGGAGGAGGAAGTCGA+AGG 0.704506 5_4:-37710171 None:intergenic
AAAGTTTACTACTTCCCACG+AGG 0.761653 5_4:+37708791 Msa0849850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTTTATCTTTTTATCAT+AGG + chr5_4:37710068-37710087 Msa0849850:intron 15.0%
!!! GTTTTTTATCTTTTTATCAT+AGG + chr5_4:37710068-37710087 Msa0849850:intron 15.0%
!! TCAATCAAATAATCTTATCA+TGG - chr5_4:37709704-37709723 None:intergenic 20.0%
!! TCAATCAAATAATCTTATCA+TGG - chr5_4:37709704-37709723 None:intergenic 20.0%
!!! TAAACTTTAGAGTGAATCTT+TGG - chr5_4:37708779-37708798 None:intergenic 25.0%
! GAATTTAACTGATGAGATTA+AGG + chr5_4:37709357-37709376 Msa0849850:CDS 25.0%
! GAAGATTCATATTTCTTCAA+AGG - chr5_4:37709535-37709554 None:intergenic 25.0%
! GTACATATGCTTTCTTAATT+TGG + chr5_4:37709646-37709665 Msa0849850:intron 25.0%
!!! CTATTTTTAGTGAATATCAC+TGG - chr5_4:37709911-37709930 None:intergenic 25.0%
! AAAAGTTTCTACTTAGCATT+AGG - chr5_4:37709979-37709998 None:intergenic 25.0%
!! TCTTTTTATCATAGGTTAAC+TGG + chr5_4:37710076-37710095 Msa0849850:intron 25.0%
!! CTTTTTATCATAGGTTAACT+GGG + chr5_4:37710077-37710096 Msa0849850:intron 25.0%
!!! TAAACTTTAGAGTGAATCTT+TGG - chr5_4:37708779-37708798 None:intergenic 25.0%
! GAATTTAACTGATGAGATTA+AGG + chr5_4:37709357-37709376 Msa0849850:CDS 25.0%
! GAAGATTCATATTTCTTCAA+AGG - chr5_4:37709535-37709554 None:intergenic 25.0%
! GTACATATGCTTTCTTAATT+TGG + chr5_4:37709646-37709665 Msa0849850:intron 25.0%
!!! CTATTTTTAGTGAATATCAC+TGG - chr5_4:37709911-37709930 None:intergenic 25.0%
! AAAAGTTTCTACTTAGCATT+AGG - chr5_4:37709979-37709998 None:intergenic 25.0%
!! TCTTTTTATCATAGGTTAAC+TGG + chr5_4:37710076-37710095 Msa0849850:intron 25.0%
!! CTTTTTATCATAGGTTAACT+GGG + chr5_4:37710077-37710096 Msa0849850:intron 25.0%
!!! AATCTTTGGAATTTTGACGT+CGG - chr5_4:37708765-37708784 None:intergenic 30.0%
TAATCTACTGAGATTTGCAT+AGG - chr5_4:37709191-37709210 None:intergenic 30.0%
AATCTCAGTAGATTACATAC+TGG + chr5_4:37709196-37709215 Msa0849850:CDS 30.0%
! AACTGATGAGATTAAGGTTT+TGG + chr5_4:37709363-37709382 Msa0849850:CDS 30.0%
ATGACAATTTCTCAGCTTAA+GGG + chr5_4:37709565-37709584 Msa0849850:CDS 30.0%
ATTCTTCTAATGTCCCTAAT+TGG + chr5_4:37709611-37709630 Msa0849850:CDS 30.0%
!! AGGAGTATTTACAATGAGAA+AGG - chr5_4:37709959-37709978 None:intergenic 30.0%
ACCAAGTGAGATATCTTTAT+TGG + chr5_4:37710357-37710376 Msa0849850:CDS 30.0%
!!! AATCTTTGGAATTTTGACGT+CGG - chr5_4:37708765-37708784 None:intergenic 30.0%
TAATCTACTGAGATTTGCAT+AGG - chr5_4:37709191-37709210 None:intergenic 30.0%
AATCTCAGTAGATTACATAC+TGG + chr5_4:37709196-37709215 Msa0849850:CDS 30.0%
! AACTGATGAGATTAAGGTTT+TGG + chr5_4:37709363-37709382 Msa0849850:CDS 30.0%
ATGACAATTTCTCAGCTTAA+GGG + chr5_4:37709565-37709584 Msa0849850:CDS 30.0%
ATTCTTCTAATGTCCCTAAT+TGG + chr5_4:37709611-37709630 Msa0849850:CDS 30.0%
!! AGGAGTATTTACAATGAGAA+AGG - chr5_4:37709959-37709978 None:intergenic 30.0%
ACCAAGTGAGATATCTTTAT+TGG + chr5_4:37710357-37710376 Msa0849850:CDS 30.0%
!!! ATCTTTGGAATTTTGACGTC+GGG - chr5_4:37708764-37708783 None:intergenic 35.0%
AGGATCAACAAAGAGATCAA+CGG - chr5_4:37708906-37708925 None:intergenic 35.0%
GATGAAAACAACAGAATCGT+TGG - chr5_4:37709257-37709276 None:intergenic 35.0%
! GTTTTCATCAAAAACTCTGC+CGG + chr5_4:37709268-37709287 Msa0849850:CDS 35.0%
AATTCCGACAGATATCTTTC+CGG - chr5_4:37709290-37709309 None:intergenic 35.0%
AGATTTCCAACCAATCTTCA+TGG - chr5_4:37709494-37709513 None:intergenic 35.0%
! ATGAAGATTGGTTGGAAATC+TGG + chr5_4:37709493-37709512 Msa0849850:CDS 35.0%
GATGACAATTTCTCAGCTTA+AGG + chr5_4:37709564-37709583 Msa0849850:CDS 35.0%
TGACAATTTCTCAGCTTAAG+GGG + chr5_4:37709566-37709585 Msa0849850:CDS 35.0%
CTATCAAGTGCATGAACAAT+GGG - chr5_4:37709830-37709849 None:intergenic 35.0%
TCTATCAAGTGCATGAACAA+TGG - chr5_4:37709831-37709850 None:intergenic 35.0%
TACAATGAGAAAGGCTTAGA+AGG - chr5_4:37709950-37709969 None:intergenic 35.0%
TTATCATAGGTTAACTGGGA+TGG + chr5_4:37710081-37710100 Msa0849850:intron 35.0%
! AAGTCTAGGAGTTTTTCTTG+AGG - chr5_4:37710205-37710224 None:intergenic 35.0%
CGTTGCTTCATAACCATAAT+AGG + chr5_4:37710319-37710338 Msa0849850:intron 35.0%
GCCAATAAAGATATCTCACT+TGG - chr5_4:37710361-37710380 None:intergenic 35.0%
TTGGCATATCTGTGCAATAT+TGG + chr5_4:37710376-37710395 Msa0849850:CDS 35.0%
!!! ATCTTTGGAATTTTGACGTC+GGG - chr5_4:37708764-37708783 None:intergenic 35.0%
AGGATCAACAAAGAGATCAA+CGG - chr5_4:37708906-37708925 None:intergenic 35.0%
GATGAAAACAACAGAATCGT+TGG - chr5_4:37709257-37709276 None:intergenic 35.0%
! GTTTTCATCAAAAACTCTGC+CGG + chr5_4:37709268-37709287 Msa0849850:CDS 35.0%
AATTCCGACAGATATCTTTC+CGG - chr5_4:37709290-37709309 None:intergenic 35.0%
AGATTTCCAACCAATCTTCA+TGG - chr5_4:37709494-37709513 None:intergenic 35.0%
! ATGAAGATTGGTTGGAAATC+TGG + chr5_4:37709493-37709512 Msa0849850:CDS 35.0%
GATGACAATTTCTCAGCTTA+AGG + chr5_4:37709564-37709583 Msa0849850:CDS 35.0%
TGACAATTTCTCAGCTTAAG+GGG + chr5_4:37709566-37709585 Msa0849850:CDS 35.0%
CTATCAAGTGCATGAACAAT+GGG - chr5_4:37709830-37709849 None:intergenic 35.0%
TCTATCAAGTGCATGAACAA+TGG - chr5_4:37709831-37709850 None:intergenic 35.0%
TACAATGAGAAAGGCTTAGA+AGG - chr5_4:37709950-37709969 None:intergenic 35.0%
TTATCATAGGTTAACTGGGA+TGG + chr5_4:37710081-37710100 Msa0849850:intron 35.0%
! AAGTCTAGGAGTTTTTCTTG+AGG - chr5_4:37710205-37710224 None:intergenic 35.0%
CGTTGCTTCATAACCATAAT+AGG + chr5_4:37710319-37710338 Msa0849850:intron 35.0%
GCCAATAAAGATATCTCACT+TGG - chr5_4:37710361-37710380 None:intergenic 35.0%
TTGGCATATCTGTGCAATAT+TGG + chr5_4:37710376-37710395 Msa0849850:CDS 35.0%
! GCGCATATCTGCCATATTTT+GGG - chr5_4:37708737-37708756 None:intergenic 40.0%
AAAATATGGCAGATATGCGC+CGG + chr5_4:37708737-37708756 Msa0849850:CDS 40.0%
!!! TCTTTGGAATTTTGACGTCG+GGG - chr5_4:37708763-37708782 None:intergenic 40.0%
AAAGTTTACTACTTCCCACG+AGG + chr5_4:37708791-37708810 Msa0849850:CDS 40.0%
ACGATCAAGAATGGTTCTTG+TGG - chr5_4:37708852-37708871 None:intergenic 40.0%
TTGTGTGAGAGTCTTGACAT+AGG - chr5_4:37709038-37709057 None:intergenic 40.0%
! ATCGAGTTAGAGCATTCGAT+AGG - chr5_4:37709088-37709107 None:intergenic 40.0%
GATCTTTCCCAAGCTTGATT+TGG + chr5_4:37709105-37709124 Msa0849850:CDS 40.0%
TATATGTGTACCCCCATTCT+CGG - chr5_4:37709168-37709187 None:intergenic 40.0%
TCAGTAGATTACATACTGGC+TGG + chr5_4:37709200-37709219 Msa0849850:CDS 40.0%
CAAGTTCACTACAGATGAAG+CGG + chr5_4:37709321-37709340 Msa0849850:CDS 40.0%
!!! GATTAAGGTTTTGGATGCAG+TGG + chr5_4:37709372-37709391 Msa0849850:CDS 40.0%
GTGTATTATCCGACAGCTAT+TGG + chr5_4:37709427-37709446 Msa0849850:CDS 40.0%
ATTATCCGACAGCTATTGGT+TGG + chr5_4:37709431-37709450 Msa0849850:CDS 40.0%
!! TATTGGTTGGCGTGATTTTG+TGG + chr5_4:37709444-37709463 Msa0849850:CDS 40.0%
TGACTAGGTTTGGATTCTGT+GGG - chr5_4:37710116-37710135 None:intergenic 40.0%
TTGACTAGGTTTGGATTCTG+TGG - chr5_4:37710117-37710136 None:intergenic 40.0%
ATCCAAACCTAGTCAATCCT+TGG + chr5_4:37710121-37710140 Msa0849850:CDS 40.0%
TTGTAAACTTCAACCTGCCA+AGG - chr5_4:37710141-37710160 None:intergenic 40.0%
! TCTAGGAGTTTTTCTTGAGG+CGG - chr5_4:37710202-37710221 None:intergenic 40.0%
TTGGCTCATTGGACCTATTA+TGG - chr5_4:37710335-37710354 None:intergenic 40.0%
!! AAGATATCTCACTTGGTGCT+TGG - chr5_4:37710354-37710373 None:intergenic 40.0%
! GCGCATATCTGCCATATTTT+GGG - chr5_4:37708737-37708756 None:intergenic 40.0%
AAAATATGGCAGATATGCGC+CGG + chr5_4:37708737-37708756 Msa0849850:CDS 40.0%
!!! TCTTTGGAATTTTGACGTCG+GGG - chr5_4:37708763-37708782 None:intergenic 40.0%
AAAGTTTACTACTTCCCACG+AGG + chr5_4:37708791-37708810 Msa0849850:CDS 40.0%
ACGATCAAGAATGGTTCTTG+TGG - chr5_4:37708852-37708871 None:intergenic 40.0%
TTGTGTGAGAGTCTTGACAT+AGG - chr5_4:37709038-37709057 None:intergenic 40.0%
! ATCGAGTTAGAGCATTCGAT+AGG - chr5_4:37709088-37709107 None:intergenic 40.0%
GATCTTTCCCAAGCTTGATT+TGG + chr5_4:37709105-37709124 Msa0849850:CDS 40.0%
TATATGTGTACCCCCATTCT+CGG - chr5_4:37709168-37709187 None:intergenic 40.0%
TCAGTAGATTACATACTGGC+TGG + chr5_4:37709200-37709219 Msa0849850:CDS 40.0%
CAAGTTCACTACAGATGAAG+CGG + chr5_4:37709321-37709340 Msa0849850:CDS 40.0%
!!! GATTAAGGTTTTGGATGCAG+TGG + chr5_4:37709372-37709391 Msa0849850:CDS 40.0%
GTGTATTATCCGACAGCTAT+TGG + chr5_4:37709427-37709446 Msa0849850:CDS 40.0%
ATTATCCGACAGCTATTGGT+TGG + chr5_4:37709431-37709450 Msa0849850:CDS 40.0%
!! TATTGGTTGGCGTGATTTTG+TGG + chr5_4:37709444-37709463 Msa0849850:CDS 40.0%
TGACTAGGTTTGGATTCTGT+GGG - chr5_4:37710116-37710135 None:intergenic 40.0%
TTGACTAGGTTTGGATTCTG+TGG - chr5_4:37710117-37710136 None:intergenic 40.0%
ATCCAAACCTAGTCAATCCT+TGG + chr5_4:37710121-37710140 Msa0849850:CDS 40.0%
TTGTAAACTTCAACCTGCCA+AGG - chr5_4:37710141-37710160 None:intergenic 40.0%
! TCTAGGAGTTTTTCTTGAGG+CGG - chr5_4:37710202-37710221 None:intergenic 40.0%
TTGGCTCATTGGACCTATTA+TGG - chr5_4:37710335-37710354 None:intergenic 40.0%
!! AAGATATCTCACTTGGTGCT+TGG - chr5_4:37710354-37710373 None:intergenic 40.0%
!!! CATATTTTGGGTTCCACACG+AGG - chr5_4:37708725-37708744 None:intergenic 45.0%
CTCGTGTGGAACCCAAAATA+TGG + chr5_4:37708723-37708742 Msa0849850:CDS 45.0%
! GGCGCATATCTGCCATATTT+TGG - chr5_4:37708738-37708757 None:intergenic 45.0%
TGGACGGTAACGATCAAGAA+TGG - chr5_4:37708861-37708880 None:intergenic 45.0%
TGTCTCCATCATCGTCTTCT+TGG - chr5_4:37709006-37709025 None:intergenic 45.0%
GACTCGTCCAAATCAAGCTT+GGG - chr5_4:37709115-37709134 None:intergenic 45.0%
AGACTCGTCCAAATCAAGCT+TGG - chr5_4:37709116-37709135 None:intergenic 45.0%
!!! CCATTCTCGGCTTTTAAGGT+CGG - chr5_4:37709155-37709174 None:intergenic 45.0%
CGACCTTAAAAGCCGAGAAT+GGG + chr5_4:37709153-37709172 Msa0849850:CDS 45.0%
GACCTTAAAAGCCGAGAATG+GGG + chr5_4:37709154-37709173 Msa0849850:CDS 45.0%
ACCTTAAAAGCCGAGAATGG+GGG + chr5_4:37709155-37709174 Msa0849850:CDS 45.0%
TCTGCCGGAAAGATATCTGT+CGG + chr5_4:37709283-37709302 Msa0849850:CDS 45.0%
AGATATCTGTCGGAATTCGC+AGG + chr5_4:37709293-37709312 Msa0849850:CDS 45.0%
CGCTTCATCTGTAGTGAACT+TGG - chr5_4:37709323-37709342 None:intergenic 45.0%
ACTACAGATGAAGCGGATGA+AGG + chr5_4:37709328-37709347 Msa0849850:CDS 45.0%
!!! GGTTTTGGATGCAGTGGAAT+TGG + chr5_4:37709378-37709397 Msa0849850:CDS 45.0%
TTTGGATGCAGTGGAATTGG+CGG + chr5_4:37709381-37709400 Msa0849850:CDS 45.0%
GTTGACGATGCCATGAAGAT+TGG + chr5_4:37709481-37709500 Msa0849850:CDS 45.0%
ACGATGCCATGAAGATTGGT+TGG + chr5_4:37709485-37709504 Msa0849850:CDS 45.0%
TGCCAAGGATTGACTAGGTT+TGG - chr5_4:37710126-37710145 None:intergenic 45.0%
AAACCTAGTCAATCCTTGGC+AGG + chr5_4:37710125-37710144 Msa0849850:CDS 45.0%
! TTTTCTTGAGGCGGAGTTGA+CGG - chr5_4:37710193-37710212 None:intergenic 45.0%
GATGAACTCTCAGCAAGTCT+AGG - chr5_4:37710219-37710238 None:intergenic 45.0%
CCATTAAGACTGCCAAGGTT+TGG - chr5_4:37710291-37710310 None:intergenic 45.0%
CCAAACCTTGGCAGTCTTAA+TGG + chr5_4:37710288-37710307 Msa0849850:intron 45.0%
!!! CATATTTTGGGTTCCACACG+AGG - chr5_4:37708725-37708744 None:intergenic 45.0%
CTCGTGTGGAACCCAAAATA+TGG + chr5_4:37708723-37708742 Msa0849850:CDS 45.0%
! GGCGCATATCTGCCATATTT+TGG - chr5_4:37708738-37708757 None:intergenic 45.0%
TGGACGGTAACGATCAAGAA+TGG - chr5_4:37708861-37708880 None:intergenic 45.0%
TGTCTCCATCATCGTCTTCT+TGG - chr5_4:37709006-37709025 None:intergenic 45.0%
GACTCGTCCAAATCAAGCTT+GGG - chr5_4:37709115-37709134 None:intergenic 45.0%
AGACTCGTCCAAATCAAGCT+TGG - chr5_4:37709116-37709135 None:intergenic 45.0%
!!! CCATTCTCGGCTTTTAAGGT+CGG - chr5_4:37709155-37709174 None:intergenic 45.0%
CGACCTTAAAAGCCGAGAAT+GGG + chr5_4:37709153-37709172 Msa0849850:CDS 45.0%
GACCTTAAAAGCCGAGAATG+GGG + chr5_4:37709154-37709173 Msa0849850:CDS 45.0%
ACCTTAAAAGCCGAGAATGG+GGG + chr5_4:37709155-37709174 Msa0849850:CDS 45.0%
TCTGCCGGAAAGATATCTGT+CGG + chr5_4:37709283-37709302 Msa0849850:CDS 45.0%
AGATATCTGTCGGAATTCGC+AGG + chr5_4:37709293-37709312 Msa0849850:CDS 45.0%
CGCTTCATCTGTAGTGAACT+TGG - chr5_4:37709323-37709342 None:intergenic 45.0%
ACTACAGATGAAGCGGATGA+AGG + chr5_4:37709328-37709347 Msa0849850:CDS 45.0%
!!! GGTTTTGGATGCAGTGGAAT+TGG + chr5_4:37709378-37709397 Msa0849850:CDS 45.0%
TTTGGATGCAGTGGAATTGG+CGG + chr5_4:37709381-37709400 Msa0849850:CDS 45.0%
GTTGACGATGCCATGAAGAT+TGG + chr5_4:37709481-37709500 Msa0849850:CDS 45.0%
ACGATGCCATGAAGATTGGT+TGG + chr5_4:37709485-37709504 Msa0849850:CDS 45.0%
TGCCAAGGATTGACTAGGTT+TGG - chr5_4:37710126-37710145 None:intergenic 45.0%
AAACCTAGTCAATCCTTGGC+AGG + chr5_4:37710125-37710144 Msa0849850:CDS 45.0%
! TTTTCTTGAGGCGGAGTTGA+CGG - chr5_4:37710193-37710212 None:intergenic 45.0%
GATGAACTCTCAGCAAGTCT+AGG - chr5_4:37710219-37710238 None:intergenic 45.0%
CCATTAAGACTGCCAAGGTT+TGG - chr5_4:37710291-37710310 None:intergenic 45.0%
CCAAACCTTGGCAGTCTTAA+TGG + chr5_4:37710288-37710307 Msa0849850:intron 45.0%
!!! ATTTTGGGTTCCACACGAGG+TGG - chr5_4:37708722-37708741 None:intergenic 50.0%
CATGTTCCAGATGACCTCGT+GGG - chr5_4:37708808-37708827 None:intergenic 50.0%
TGGTTCTTGTGGCAGCAGTA+GGG - chr5_4:37708841-37708860 None:intergenic 50.0%
ATGGTTCTTGTGGCAGCAGT+AGG - chr5_4:37708842-37708861 None:intergenic 50.0%
CGATGCATGGAATGGATGGA+CGG - chr5_4:37708877-37708896 None:intergenic 50.0%
GAGACGATGCATGGAATGGA+TGG - chr5_4:37708881-37708900 None:intergenic 50.0%
GGAAGAGACGATGCATGGAA+TGG - chr5_4:37708885-37708904 None:intergenic 50.0%
TCAACGGAAGAGACGATGCA+TGG - chr5_4:37708890-37708909 None:intergenic 50.0%
CAGTTTGGCAAAGACCTCGT+CGG - chr5_4:37708933-37708952 None:intergenic 50.0%
AGGGGGTTCTTGGTCAGTTA+CGG - chr5_4:37708966-37708985 None:intergenic 50.0%
TCCATCATCGTCTTCTTGGC+CGG - chr5_4:37709002-37709021 None:intergenic 50.0%
CCGACCTTAAAAGCCGAGAA+TGG + chr5_4:37709152-37709171 Msa0849850:CDS 50.0%
! ACCCCCATTCTCGGCTTTTA+AGG - chr5_4:37709159-37709178 None:intergenic 50.0%
ACAGATGAAGCGGATGAAGG+AGG + chr5_4:37709331-37709350 Msa0849850:CDS 50.0%
TCACGCCAACCAATAGCTGT+CGG - chr5_4:37709439-37709458 None:intergenic 50.0%
! TGGTTGGCGTGATTTTGTGG+TGG + chr5_4:37709447-37709466 Msa0849850:CDS 50.0%
CCTCAAGCATGCGCCAATTA+GGG - chr5_4:37709627-37709646 None:intergenic 50.0%
ACCTCAAGCATGCGCCAATT+AGG - chr5_4:37709628-37709647 None:intergenic 50.0%
CAACCTGCCAAGGATTGACT+AGG - chr5_4:37710131-37710150 None:intergenic 50.0%
TTCATCCCCCCAACAAACCT+TGG + chr5_4:37710233-37710252 Msa0849850:CDS 50.0%
! TGACCCTGCCAAGGTTTGTT+GGG - chr5_4:37710244-37710263 None:intergenic 50.0%
TTGACCCTGCCAAGGTTTGT+TGG - chr5_4:37710245-37710264 None:intergenic 50.0%
CCAAGGTTTGGCTATGTGTC+AGG - chr5_4:37710279-37710298 None:intergenic 50.0%
CCTGACACATAGCCAAACCT+TGG + chr5_4:37710276-37710295 Msa0849850:intron 50.0%
CAGCACCATTAAGACTGCCA+AGG - chr5_4:37710296-37710315 None:intergenic 50.0%
!! TCACTTGGTGCTTGGCTCAT+TGG - chr5_4:37710346-37710365 None:intergenic 50.0%
!!! ATTTTGGGTTCCACACGAGG+TGG - chr5_4:37708722-37708741 None:intergenic 50.0%
CATGTTCCAGATGACCTCGT+GGG - chr5_4:37708808-37708827 None:intergenic 50.0%
TGGTTCTTGTGGCAGCAGTA+GGG - chr5_4:37708841-37708860 None:intergenic 50.0%
ATGGTTCTTGTGGCAGCAGT+AGG - chr5_4:37708842-37708861 None:intergenic 50.0%
CGATGCATGGAATGGATGGA+CGG - chr5_4:37708877-37708896 None:intergenic 50.0%
GAGACGATGCATGGAATGGA+TGG - chr5_4:37708881-37708900 None:intergenic 50.0%
GGAAGAGACGATGCATGGAA+TGG - chr5_4:37708885-37708904 None:intergenic 50.0%
TCAACGGAAGAGACGATGCA+TGG - chr5_4:37708890-37708909 None:intergenic 50.0%
CAGTTTGGCAAAGACCTCGT+CGG - chr5_4:37708933-37708952 None:intergenic 50.0%
AGGGGGTTCTTGGTCAGTTA+CGG - chr5_4:37708966-37708985 None:intergenic 50.0%
TCCATCATCGTCTTCTTGGC+CGG - chr5_4:37709002-37709021 None:intergenic 50.0%
CCGACCTTAAAAGCCGAGAA+TGG + chr5_4:37709152-37709171 Msa0849850:CDS 50.0%
! ACCCCCATTCTCGGCTTTTA+AGG - chr5_4:37709159-37709178 None:intergenic 50.0%
ACAGATGAAGCGGATGAAGG+AGG + chr5_4:37709331-37709350 Msa0849850:CDS 50.0%
TCACGCCAACCAATAGCTGT+CGG - chr5_4:37709439-37709458 None:intergenic 50.0%
! TGGTTGGCGTGATTTTGTGG+TGG + chr5_4:37709447-37709466 Msa0849850:CDS 50.0%
CCTCAAGCATGCGCCAATTA+GGG - chr5_4:37709627-37709646 None:intergenic 50.0%
ACCTCAAGCATGCGCCAATT+AGG - chr5_4:37709628-37709647 None:intergenic 50.0%
CAACCTGCCAAGGATTGACT+AGG - chr5_4:37710131-37710150 None:intergenic 50.0%
TTCATCCCCCCAACAAACCT+TGG + chr5_4:37710233-37710252 Msa0849850:CDS 50.0%
! TGACCCTGCCAAGGTTTGTT+GGG - chr5_4:37710244-37710263 None:intergenic 50.0%
TTGACCCTGCCAAGGTTTGT+TGG - chr5_4:37710245-37710264 None:intergenic 50.0%
CCAAGGTTTGGCTATGTGTC+AGG - chr5_4:37710279-37710298 None:intergenic 50.0%
CCTGACACATAGCCAAACCT+TGG + chr5_4:37710276-37710295 Msa0849850:intron 50.0%
CAGCACCATTAAGACTGCCA+AGG - chr5_4:37710296-37710315 None:intergenic 50.0%
!! TCACTTGGTGCTTGGCTCAT+TGG - chr5_4:37710346-37710365 None:intergenic 50.0%
!! TGGAATTTTGACGTCGGGGC+CGG - chr5_4:37708759-37708778 None:intergenic 55.0%
CTACTTCCCACGAGGTCATC+TGG + chr5_4:37708799-37708818 Msa0849850:CDS 55.0%
GCATGTTCCAGATGACCTCG+TGG - chr5_4:37708809-37708828 None:intergenic 55.0%
GGTTCTTGTGGCAGCAGTAG+GGG - chr5_4:37708840-37708859 None:intergenic 55.0%
TGTTGATCCTCACACCGACG+AGG + chr5_4:37708916-37708935 Msa0849850:CDS 55.0%
TACGGGAGTCAGGAGCAGTT+TGG - chr5_4:37708948-37708967 None:intergenic 55.0%
CTTGGTCAGTTACGGGAGTC+AGG - chr5_4:37708958-37708977 None:intergenic 55.0%
GGGGGTTCTTGGTCAGTTAC+GGG - chr5_4:37708965-37708984 None:intergenic 55.0%
TCTTCTTGGCCGGGAACTAC+AGG - chr5_4:37708992-37709011 None:intergenic 55.0%
CCATCATCGTCTTCTTGGCC+GGG - chr5_4:37709001-37709020 None:intergenic 55.0%
CCCTAATTGGCGCATGCTTG+AGG + chr5_4:37709624-37709643 Msa0849850:CDS 55.0%
!! ACCCTGCCAAGGTTTGTTGG+GGG - chr5_4:37710242-37710261 None:intergenic 55.0%
!! GACCCTGCCAAGGTTTGTTG+GGG - chr5_4:37710243-37710262 None:intergenic 55.0%
CAAACCTTGGCAGGGTCAAG+TGG + chr5_4:37710246-37710265 Msa0849850:CDS 55.0%
AGTACCACTTGACCCTGCCA+AGG - chr5_4:37710253-37710272 None:intergenic 55.0%
!! TGGAATTTTGACGTCGGGGC+CGG - chr5_4:37708759-37708778 None:intergenic 55.0%
CTACTTCCCACGAGGTCATC+TGG + chr5_4:37708799-37708818 Msa0849850:CDS 55.0%
GCATGTTCCAGATGACCTCG+TGG - chr5_4:37708809-37708828 None:intergenic 55.0%
GGTTCTTGTGGCAGCAGTAG+GGG - chr5_4:37708840-37708859 None:intergenic 55.0%
TGTTGATCCTCACACCGACG+AGG + chr5_4:37708916-37708935 Msa0849850:CDS 55.0%
TACGGGAGTCAGGAGCAGTT+TGG - chr5_4:37708948-37708967 None:intergenic 55.0%
CTTGGTCAGTTACGGGAGTC+AGG - chr5_4:37708958-37708977 None:intergenic 55.0%
GGGGGTTCTTGGTCAGTTAC+GGG - chr5_4:37708965-37708984 None:intergenic 55.0%
TCTTCTTGGCCGGGAACTAC+AGG - chr5_4:37708992-37709011 None:intergenic 55.0%
CCATCATCGTCTTCTTGGCC+GGG - chr5_4:37709001-37709020 None:intergenic 55.0%
CCCTAATTGGCGCATGCTTG+AGG + chr5_4:37709624-37709643 Msa0849850:CDS 55.0%
!! ACCCTGCCAAGGTTTGTTGG+GGG - chr5_4:37710242-37710261 None:intergenic 55.0%
!! GACCCTGCCAAGGTTTGTTG+GGG - chr5_4:37710243-37710262 None:intergenic 55.0%
CAAACCTTGGCAGGGTCAAG+TGG + chr5_4:37710246-37710265 Msa0849850:CDS 55.0%
AGTACCACTTGACCCTGCCA+AGG - chr5_4:37710253-37710272 None:intergenic 55.0%
TCATCCTCTGCCACCTCGTG+TGG + chr5_4:37708709-37708728 Msa0849850:CDS 60.0%
GCAAAGACCTCGTCGGTGTG+AGG - chr5_4:37708926-37708945 None:intergenic 60.0%
CTACAGGAGGAGGGGGTTCT+TGG - chr5_4:37708976-37708995 None:intergenic 60.0%
TCTTGGCCGGGAACTACAGG+AGG - chr5_4:37708989-37709008 None:intergenic 60.0%
CCCGGCCAAGAAGACGATGA+TGG + chr5_4:37708998-37709017 Msa0849850:CDS 60.0%
! GAGGAGGAAGTCGAAGGTGC+AGG - chr5_4:37710168-37710187 None:intergenic 60.0%
ACGGTGGAGGAGGAAGTCGA+AGG - chr5_4:37710174-37710193 None:intergenic 60.0%
TCTTGAGGCGGAGTTGACGG+TGG - chr5_4:37710190-37710209 None:intergenic 60.0%
TCCCCCCAACAAACCTTGGC+AGG + chr5_4:37710237-37710256 Msa0849850:CDS 60.0%
!! CCCTGCCAAGGTTTGTTGGG+GGG - chr5_4:37710241-37710260 None:intergenic 60.0%
CCCCCCAACAAACCTTGGCA+GGG + chr5_4:37710238-37710257 Msa0849850:CDS 60.0%
TCATCCTCTGCCACCTCGTG+TGG + chr5_4:37708709-37708728 Msa0849850:CDS 60.0%
GCAAAGACCTCGTCGGTGTG+AGG - chr5_4:37708926-37708945 None:intergenic 60.0%
CTACAGGAGGAGGGGGTTCT+TGG - chr5_4:37708976-37708995 None:intergenic 60.0%
TCTTGGCCGGGAACTACAGG+AGG - chr5_4:37708989-37709008 None:intergenic 60.0%
CCCGGCCAAGAAGACGATGA+TGG + chr5_4:37708998-37709017 Msa0849850:CDS 60.0%
! GAGGAGGAAGTCGAAGGTGC+AGG - chr5_4:37710168-37710187 None:intergenic 60.0%
ACGGTGGAGGAGGAAGTCGA+AGG - chr5_4:37710174-37710193 None:intergenic 60.0%
TCTTGAGGCGGAGTTGACGG+TGG - chr5_4:37710190-37710209 None:intergenic 60.0%
TCCCCCCAACAAACCTTGGC+AGG + chr5_4:37710237-37710256 Msa0849850:CDS 60.0%
!! CCCTGCCAAGGTTTGTTGGG+GGG - chr5_4:37710241-37710260 None:intergenic 60.0%
CCCCCCAACAAACCTTGGCA+GGG + chr5_4:37710238-37710257 Msa0849850:CDS 60.0%
GGTTCCACACGAGGTGGCAG+AGG - chr5_4:37708716-37708735 None:intergenic 65.0%
CCGGGAACTACAGGAGGAGG+GGG - chr5_4:37708983-37709002 None:intergenic 65.0%
CCCCCTCCTCCTGTAGTTCC+CGG + chr5_4:37708980-37708999 Msa0849850:CDS 65.0%
GCCGGGAACTACAGGAGGAG+GGG - chr5_4:37708984-37709003 None:intergenic 65.0%
GGCCGGGAACTACAGGAGGA+GGG - chr5_4:37708985-37709004 None:intergenic 65.0%
TGGCCGGGAACTACAGGAGG+AGG - chr5_4:37708986-37709005 None:intergenic 65.0%
TGAGGCGGAGTTGACGGTGG+AGG - chr5_4:37710187-37710206 None:intergenic 65.0%
GGTTCCACACGAGGTGGCAG+AGG - chr5_4:37708716-37708735 None:intergenic 65.0%
CCGGGAACTACAGGAGGAGG+GGG - chr5_4:37708983-37709002 None:intergenic 65.0%
CCCCCTCCTCCTGTAGTTCC+CGG + chr5_4:37708980-37708999 Msa0849850:CDS 65.0%
GCCGGGAACTACAGGAGGAG+GGG - chr5_4:37708984-37709003 None:intergenic 65.0%
GGCCGGGAACTACAGGAGGA+GGG - chr5_4:37708985-37709004 None:intergenic 65.0%
TGGCCGGGAACTACAGGAGG+AGG - chr5_4:37708986-37709005 None:intergenic 65.0%
TGAGGCGGAGTTGACGGTGG+AGG - chr5_4:37710187-37710206 None:intergenic 65.0%
GGCGGAGTTGACGGTGGAGG+AGG - chr5_4:37710184-37710203 None:intergenic 70.0%
GGCGGAGTTGACGGTGGAGG+AGG - chr5_4:37710184-37710203 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 37708704 37710426 37708704 ID=Msa0849850;Name=Msa0849850
chr5_4 mRNA 37708704 37710426 37708704 ID=Msa0849850-mRNA-1;Parent=Msa0849850;Name=Msa0849850-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|401
chr5_4 exon 37708704 37709645 37708704 ID=Msa0849850-mRNA-1:exon:12243;Parent=Msa0849850-mRNA-1
chr5_4 exon 37710090 37710267 37710090 ID=Msa0849850-mRNA-1:exon:12244;Parent=Msa0849850-mRNA-1
chr5_4 exon 37710341 37710426 37710341 ID=Msa0849850-mRNA-1:exon:12245;Parent=Msa0849850-mRNA-1
chr5_4 CDS 37708704 37709645 37708704 ID=Msa0849850-mRNA-1:cds;Parent=Msa0849850-mRNA-1
chr5_4 CDS 37710090 37710267 37710090 ID=Msa0849850-mRNA-1:cds;Parent=Msa0849850-mRNA-1
chr5_4 CDS 37710341 37710426 37710341 ID=Msa0849850-mRNA-1:cds;Parent=Msa0849850-mRNA-1
Gene Sequence

>Msa0849850

ATGTCTCATCCTCTGCCACCTCGTGTGGAACCCAAAATATGGCAGATATGCGCCGGCCCCGACGTCAAAATTCCAAAGATTCACTCTAAAGTTTACTACTTCCCACGAGGTCATCTGGAACATGCATGTTCTTCCCCTACTGCTGCCACAAGAACCATTCTTGATCGTTACCGTCCATCCATTCCATGCATCGTCTCTTCCGTTGATCTCTTTGTTGATCCTCACACCGACGAGGTCTTTGCCAAACTGCTCCTGACTCCCGTAACTGACCAAGAACCCCCTCCTCCTGTAGTTCCCGGCCAAGAAGACGATGATGGAGACAATCTTGTTTCCTATGTCAAGACTCTCACACAATCTGATTGTGCAAGAGTATTATGTGTACCTATCGAATGCTCTAACTCGATCTTTCCCAAGCTTGATTTGGACGAGTCTCAGAGCATCACTGTCACCGACCTTAAAAGCCGAGAATGGGGGTACACATATACCTATGCAAATCTCAGTAGATTACATACTGGCTGGTTAAATTTTGTACGAGAGAAGAAACTCGTCGCCAACGATTCTGTTGTTTTCATCAAAAACTCTGCCGGAAAGATATCTGTCGGAATTCGCAGGAACACCAAGTTCACTACAGATGAAGCGGATGAAGGAGGCGAGAATTTAACTGATGAGATTAAGGTTTTGGATGCAGTGGAATTGGCGGAGAAGAACACAGCATTTGATGTTGTGTATTATCCGACAGCTATTGGTTGGCGTGATTTTGTGGTGGATGCTAAGACTGTTGACGATGCCATGAAGATTGGTTGGAAATCTGGAATGAGAGTGAAACTTCCTTTGAAGAAATATGAATCTTCAAGTTCAAAGATGACAATTTCTCAGCTTAAGGGGACAATCTCTTTTGTCTTTAATGATTCTTCTAATGTCCCTAATTGGCGCATGCTTGAGGTTAACTGGGATGGACTTGATTTCCCACAGAATCCAAACCTAGTCAATCCTTGGCAGGTTGAAGTTTACAACATACCTGCACCTTCGACTTCCTCCTCCACCGTCAACTCCGCCTCAAGAAAAACTCCTAGACTTGCTGAGAGTTCATCCCCCCAACAAACCTTGGCAGGGTCAAGTGGTCCAATGAGCCAAGCACCAAGTGAGATATCTTTATTGGCATATCTGTGCAATATTGGTCTTCAGTCACAAGTAGAAACTCAGTGA
Protein sequence

>Msa0849850

MSHPLPPRVEPKIWQICAGPDVKIPKIHSKVYYFPRGHLEHACSSPTAATRTILDRYRPSIPCIVSSVDLFVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQEDDDGDNLVSYVKTLTQSDCARVLCVPIECSNSIFPKLDLDESQSITVTDLKSREWGYTYTYANLSRLHTGWLNFVREKKLVANDSVVFIKNSAGKISVGIRRNTKFTTDEADEGGENLTDEIKVLDAVELAEKNTAFDVVYYPTAIGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSSSKMTISQLKGTISFVFNDSSNVPNWRMLEVNWDGLDFPQNPNLVNPWQVEVYNIPAPSTSSSTVNSASRKTPRLAESSSPQQTLAGSSGPMSQAPSEISLLAYLCNIGLQSQVETQ*