AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0849880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0849880 MtrunA17_Chr5g0424741 45.339 472 139 14 1 358 39 505 3.28e-98 301
Msa0849880 MtrunA17_Chr5g0424801 50.301 332 104 10 1 273 39 368 9.46e-86 264
Msa0849880 MtrunA17_Chr5g0425261 65.158 221 69 5 1 215 39 257 1.03e-83 259
Msa0849880 MtrunA17_Chr5g0424931 41.705 434 140 15 1 345 46 455 2.08e-77 248
Msa0849880 MtrunA17_Chr5g0424791 83.571 140 18 3 25 159 12 151 1.78e-68 212
Msa0849880 MtrunA17_Chr5g0417281 36.301 438 196 14 1 372 38 458 3.24e-58 197
Msa0849880 MtrunA17_Chr1g0178011 41.742 333 122 14 1 267 39 365 3.15e-54 185
Msa0849880 MtrunA17_Chr5g0436761 33.495 412 172 14 1 342 39 418 6.45e-48 168
Msa0849880 MtrunA17_Chr5g0417211 45.957 235 100 10 1 217 39 264 2.67e-44 157
Msa0849880 MtrunA17_Chr2g0289221 42.545 275 124 12 1 250 47 312 6.56e-43 152
Msa0849880 MtrunA17_Chr2g0277461 35.522 335 173 14 27 328 66 390 1.30e-40 149
Msa0849880 MtrunA17_Chr2g0277531 40.870 230 115 7 1 215 47 270 3.09e-38 139
Msa0849880 MtrunA17_Chr3g0115271 31.166 446 177 16 33 372 76 497 2.34e-37 142
Msa0849880 MtrunA17_Chr5g0424781 95.775 71 3 0 259 329 6 76 1.14e-30 112
Msa0849880 MtrunA17_Chr5g0425661 45.625 160 67 6 11 154 73 228 1.22e-28 111
Msa0849880 MtrunA17_Chr1g0181211 28.348 448 173 21 2 329 55 474 3.59e-25 107
Msa0849880 MtrunA17_Chr7g0264171 27.594 453 169 20 2 328 59 478 1.21e-23 102
Msa0849880 MtrunA17_Chr1g0199681 29.380 371 141 18 3 261 120 481 2.87e-20 92.4
Msa0849880 MtrunA17_Chr2g0326761 25.420 417 173 17 33 336 67 458 9.75e-19 87.8
Msa0849880 MtrunA17_Chr4g0028971 27.182 401 159 15 35 322 68 448 1.03e-18 87.8
Msa0849880 MtrunA17_Chr7g0264161 32.189 233 113 10 2 205 20 236 1.86e-18 85.1
Msa0849880 MtrunA17_Chr2g0285461 35.211 142 80 4 34 163 86 227 5.52e-17 82.8
Msa0849880 MtrunA17_Chr5g0433301 36.364 143 77 5 34 163 87 228 4.16e-16 80.1
Msa0849880 MtrunA17_Chr3g0109391 35.664 143 78 5 34 163 89 230 1.23e-15 78.6
Msa0849880 MtrunA17_Chr8g0376771 29.592 196 104 7 34 205 85 270 2.17e-15 77.8
Msa0849880 MtrunA17_Chr2g0301251 30.047 213 127 7 23 213 65 277 3.01e-15 77.4
Msa0849880 MtrunA17_Chr4g0070181 28.837 215 131 7 21 213 63 277 2.62e-14 74.7
Msa0849880 MtrunA17_Chr2g0276781 29.048 210 122 8 38 232 89 286 7.58e-13 70.1
Msa0849880 MtrunA17_Chr8g0389081 29.697 165 102 5 18 168 77 241 1.42e-12 69.3
Msa0849880 MtrunA17_Chr2g0282961 28.042 189 113 7 38 203 112 300 8.39e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0849880 AT1G77850.1 27.352 457 198 17 26 371 64 497 3.41e-25 107
Msa0849880 AT1G77850.2 27.352 457 198 17 26 371 64 497 5.07e-25 107
Msa0849880 AT4G30080.1 26.566 399 164 13 33 323 74 451 2.04e-20 93.6
Msa0849880 AT2G28350.1 35.099 151 78 5 33 163 65 215 1.73e-17 84.7
Msa0849880 AT2G28350.2 35.099 151 78 5 33 163 65 215 1.80e-17 84.3
Msa0849880 AT1G30330.3 35.915 142 79 4 34 163 88 229 2.68e-17 84.3
Msa0849880 AT1G30330.2 35.915 142 79 4 34 163 88 229 2.68e-17 84.3
Msa0849880 AT1G30330.1 35.915 142 79 4 34 163 86 227 2.76e-17 84.3
Msa0849880 AT5G37020.2 35.172 145 80 5 34 165 85 228 9.10e-16 79.3
Msa0849880 AT5G37020.1 35.172 145 80 5 34 165 85 228 1.01e-15 79.3
Msa0849880 AT2G33860.1 29.126 206 120 7 34 215 109 312 1.08e-15 79.0
Msa0849880 AT1G59750.4 30.366 191 115 7 38 213 88 275 2.39e-15 78.2
Msa0849880 AT1G59750.2 30.366 191 115 7 38 213 88 275 2.42e-15 78.2
Msa0849880 AT1G59750.1 30.366 191 115 7 38 213 88 275 2.78e-15 77.8
Msa0849880 AT1G59750.3 30.366 191 115 7 38 213 88 275 2.78e-15 77.8
Msa0849880 AT5G20730.2 34.228 149 85 5 34 169 86 234 1.62e-13 72.8
Msa0849880 AT5G20730.3 34.228 149 85 5 34 169 86 234 1.73e-13 72.4
Msa0849880 AT5G20730.1 34.228 149 85 5 34 169 86 234 1.76e-13 72.4
Msa0849880 AT2G33860.2 29.677 155 96 5 73 215 2 155 5.30e-13 70.5
Msa0849880 AT5G62000.2 31.333 150 75 5 34 163 123 264 1.35e-12 69.7
Msa0849880 AT5G62000.5 31.333 150 75 5 34 163 123 264 1.35e-12 69.7
Msa0849880 AT5G62000.3 31.333 150 75 5 34 163 123 264 1.35e-12 69.7
Msa0849880 AT5G62000.1 31.333 150 75 5 34 163 123 264 1.35e-12 69.7
Msa0849880 AT5G62000.4 31.333 150 75 5 34 163 123 264 1.44e-12 69.7
Msa0849880 AT5G37020.3 34.109 129 74 4 47 165 6 133 8.02e-12 67.4
Msa0849880 AT1G34410.1 28.218 202 120 8 34 216 89 284 5.44e-11 64.7

Find 96 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTTTATCATAGGTTAAT+TGG 0.084452 5_4:+37784696 Msa0849880:intron
CATGAAAACAACAGAATCTT+TGG 0.216238 5_4:-37783806 None:intergenic
AAGGATCCCATTGTTGAATT+AGG 0.252137 5_4:-37784942 None:intergenic
CCTCCTCCTCCTGTTGTTCC+TGG 0.258397 5_4:+37783541 Msa0849880:CDS
GGTAATTGAGGCACGGTAAT+TGG 0.280306 5_4:-37784876 None:intergenic
TATTTCCATCGTCGTCTTCT+TGG 0.295227 5_4:-37783564 None:intergenic
CTTTCACCTGCTTCAGCTGC+AGG 0.319048 5_4:-37783880 None:intergenic
CTCTTTATCATAGGTTAATT+GGG 0.320114 5_4:+37784697 Msa0849880:intron
GGCAACAAGTCAGCCGATTT+AGG 0.332336 5_4:-37785146 None:intergenic
CAACAGGAGGAGGAGGATCT+TGG 0.362022 5_4:-37783534 None:intergenic
GACTTCACCAAGTCAAGCTT+TGG 0.363368 5_4:-37783670 None:intergenic
CAGCTGGCATGCAGGGAGCC+AGG 0.385904 5_4:+37784997 Msa0849880:CDS
TGGGAGATTGTTACACCGTT+AGG 0.386268 5_4:-37783400 None:intergenic
TATCAGAATCCAACCATGTT+TGG 0.389045 5_4:-37784968 None:intergenic
AAGAATCTGATACAGATAAA+TGG 0.391533 5_4:-37785025 None:intergenic
GGAGGATCTTGGGCAGTTAC+CGG 0.415046 5_4:-37783523 None:intergenic
CCATCGTCGTCTTCTTGGCC+AGG 0.432097 5_4:-37783559 None:intergenic
CGACCTTAAAAGCCAAGAAT+GGG 0.432454 5_4:+37783711 Msa0849880:CDS
AGAAGAATATGAAATTTGTA+AGG 0.434833 5_4:-37784850 None:intergenic
ATACATTGGCAGTCCTAAAT+CGG 0.439684 5_4:+37785133 Msa0849880:CDS
AGTACAATGGCAGGGTTTAG+TGG 0.442032 5_4:+37785089 Msa0849880:CDS
AAAGGGGAAGCTGGTGGTGG+AGG 0.443546 5_4:-37784900 None:intergenic
AACAGGAGGAGGAGGATCTT+GGG 0.445154 5_4:-37783533 None:intergenic
ATCCAACCATGTTTGGTTCA+AGG 0.448487 5_4:-37784961 None:intergenic
TTATCATAGGTTAATTGGGA+TGG 0.454702 5_4:+37784701 Msa0849880:intron
TCTTCTTGGCCAGGAACAAC+AGG 0.455566 5_4:-37783550 None:intergenic
GGGAGATTGTTACACCGTTA+GGG 0.455856 5_4:-37783399 None:intergenic
GGGGAAGCTGGTGGTGGAGG+CGG 0.457058 5_4:-37784897 None:intergenic
AACTTCCCTGCAGCTGAAGC+AGG 0.461052 5_4:+37783874 Msa0849880:CDS
ATCGGGAACAGTACAATGGC+AGG 0.465455 5_4:+37785080 Msa0849880:CDS
TCACACCATTTCCTAGCTGT+TGG 0.474083 5_4:-37783985 None:intergenic
TACCGGAGTGAGGAGCAGTT+TGG 0.479172 5_4:-37783506 None:intergenic
ATTATCCAACAGCTAGGAAA+TGG 0.485842 5_4:+37783980 Msa0849880:CDS
CTGAAGCAGGTGAAAGAGGC+AGG 0.491469 5_4:+37783887 Msa0849880:CDS
ATTGTTGAATTAGGTAACTC+TGG 0.494692 5_4:-37784933 None:intergenic
ATGAAAGGGGAAGCTGGTGG+TGG 0.496204 5_4:-37784903 None:intergenic
GACAAGGGTGATGGTTTCAT+CGG 0.500866 5_4:+37785062 Msa0849880:CDS
CCGACCTTAAAAGCCAAGAA+TGG 0.501034 5_4:+37783710 Msa0849880:CDS
GATCTTTCCAAAGCTTGACT+TGG 0.502331 5_4:+37783663 Msa0849880:CDS
AAGAATATGAAATTTGTAAG+GGG 0.503640 5_4:-37784848 None:intergenic
ATACAAACATAGTCAATCCT+TGG 0.507379 5_4:+37784745 Msa0849880:CDS
AGTGAGAGCATCAACAAATC+CGG 0.509407 5_4:-37783470 None:intergenic
GAGTTACCTAATTCAACAAT+GGG 0.511187 5_4:+37784936 Msa0849880:CDS
ATCCTTGAACCAAACATGGT+TGG 0.512134 5_4:+37784959 Msa0849880:CDS
ACTTGTTGCTTGGTTCATTG+AGG 0.515871 5_4:-37785167 None:intergenic
GCAGCTGAAGCAGGTGAAAG+AGG 0.520243 5_4:+37783883 Msa0849880:CDS
TTTGAATGCAGTGGAATTGG+CGG 0.522289 5_4:+37783930 Msa0849880:CDS
GGTGGTGGAGGCGGTAATTG+AGG 0.526915 5_4:-37784888 None:intergenic
GAAAAGATGCATGGAAAGGA+TGG 0.528718 5_4:-37783445 None:intergenic
ACTCTGGCATAGCAATGAAA+GGG 0.529724 5_4:-37784917 None:intergenic
AACTCTGGCATAGCAATGAA+AGG 0.530672 5_4:-37784918 None:intergenic
ACAAGGGTGATGGTTTCATC+GGG 0.532238 5_4:+37785063 Msa0849880:CDS
TTTCACCTGCTTCAGCTGCA+GGG 0.536307 5_4:-37783879 None:intergenic
CGCCAAACTGCTCCTCACTC+CGG 0.538251 5_4:+37783504 Msa0849880:CDS
TACAGATAAATGGTCATGCC+TGG 0.539273 5_4:-37785015 None:intergenic
CATGCATGTCGTTCCCCTAA+CGG 0.541193 5_4:+37783385 Msa0849880:CDS
ATAGCAATGAAAGGGGAAGC+TGG 0.541679 5_4:-37784909 None:intergenic
AAACATAGTCAATCCTTGGC+AGG 0.544769 5_4:+37784749 Msa0849880:CDS
GCATTGAATGACAAGGGTGA+TGG 0.547870 5_4:+37785053 Msa0849880:CDS
GAAGAACACTGAGCATGTCT+AGG 0.553848 5_4:-37784825 None:intergenic
TTGCAAGCTTCAACCTGCCA+AGG 0.560996 5_4:-37784762 None:intergenic
CCAGGAACAACAGGAGGAGG+AGG 0.565666 5_4:-37783541 None:intergenic
GAACGACATGCATGTTCCAA+AGG 0.568910 5_4:-37783376 None:intergenic
GAAGAATATGAAATTTGTAA+GGG 0.569354 5_4:-37784849 None:intergenic
TGTTGATGCTCTCACTGATG+AGG 0.570829 5_4:+37783477 Msa0849880:CDS
AGAGTTACCTAATTCAACAA+TGG 0.572497 5_4:+37784935 Msa0849880:CDS
TGGCCAGGAACAACAGGAGG+AGG 0.574874 5_4:-37783544 None:intergenic
GGCTGAAAAGATGCATGGAA+AGG 0.576654 5_4:-37783449 None:intergenic
TTGTGTATTATCCAACAGCT+AGG 0.584708 5_4:+37783974 Msa0849880:CDS
AGTAACGATCGTAAAGACAC+TGG 0.594797 5_4:-37783420 None:intergenic
TTCAAAAGCATTGAATGACA+AGG 0.595086 5_4:+37785046 Msa0849880:CDS
AATTGAGGCACGGTAATTGG+CGG 0.601247 5_4:-37784873 None:intergenic
TCAGTAGACTACGTACTGGC+TGG 0.603214 5_4:+37783752 Msa0849880:CDS
CAGGAATTTAACTGAGAGTG+CGG 0.604399 5_4:+37783906 Msa0849880:CDS
TCAAAAGCATTGAATGACAA+GGG 0.604850 5_4:+37785047 Msa0849880:CDS
TTGTGATGGATGCTATGCTA+AGG 0.605653 5_4:+37784010 Msa0849880:CDS
TCTGACACAGAGCTATACAT+TGG 0.608904 5_4:+37785119 Msa0849880:CDS
AGAATATGAAATTTGTAAGG+GGG 0.613094 5_4:-37784847 None:intergenic
ATCAAGTCAGCGCATTCATG+AGG 0.615421 5_4:-37783643 None:intergenic
AAACTCAGTAGACTACGTAC+TGG 0.617424 5_4:+37783748 Msa0849880:CDS
TGGGATCCTTGAACCAAACA+TGG 0.620645 5_4:+37784955 Msa0849880:CDS
AATCCGGCTGAAAAGATGCA+TGG 0.622986 5_4:-37783454 None:intergenic
TCGGGAACAGTACAATGGCA+GGG 0.632286 5_4:+37785081 Msa0849880:CDS
GGAGATTGTTACACCGTTAG+GGG 0.633814 5_4:-37783398 None:intergenic
ACCTTAAAAGCCAAGAATGG+GGG 0.634733 5_4:+37783713 Msa0849880:CDS
GACCTTAAAAGCCAAGAATG+GGG 0.635286 5_4:+37783712 Msa0849880:CDS
CTTGGGCAGTTACCGGAGTG+AGG 0.639258 5_4:-37783516 None:intergenic
CTCTGGCATAGCAATGAAAG+GGG 0.649055 5_4:-37784916 None:intergenic
GGGAATGGTAGATCTAGTGA+AGG 0.657354 5_4:-37784789 None:intergenic
TCTTGGCCAGGAACAACAGG+AGG 0.662003 5_4:-37783547 None:intergenic
TGGAGGCGGTAATTGAGGCA+CGG 0.673967 5_4:-37784883 None:intergenic
GTAACGATCGTAAAGACACT+GGG 0.678398 5_4:-37783419 None:intergenic
TTTCATCGGGAACAGTACAA+TGG 0.687293 5_4:+37785076 Msa0849880:CDS
CCTGGCCAAGAAGACGACGA+TGG 0.698976 5_4:+37783559 Msa0849880:CDS
TAGTCTACTGAGTTTCACGT+AGG 0.724118 5_4:-37783740 None:intergenic
GCAATGAAAGGGGAAGCTGG+TGG 0.732317 5_4:-37784906 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTGCAAGATTTTATTT+AGG - chr5_4:37784728-37784747 None:intergenic 15.0%
!!! TATTTTGCAAGATTTTATTT+AGG - chr5_4:37784728-37784747 None:intergenic 15.0%
!!! AATTCCAACTAATTTTTTTC+TGG - chr5_4:37783842-37783861 None:intergenic 20.0%
!! TCAAACAAATCATGAAATTA+GGG - chr5_4:37784264-37784283 None:intergenic 20.0%
!! ATCAAACAAATCATGAAATT+AGG - chr5_4:37784265-37784284 None:intergenic 20.0%
!!! CAATGTTTTAGAATTACATT+TGG - chr5_4:37784424-37784443 None:intergenic 20.0%
!! ATCAAAAGTTTCTTATCAAT+TGG - chr5_4:37784606-37784625 None:intergenic 20.0%
!! AAGAATATGAAATTTGTAAG+GGG - chr5_4:37784851-37784870 None:intergenic 20.0%
!! GAAGAATATGAAATTTGTAA+GGG - chr5_4:37784852-37784871 None:intergenic 20.0%
!! AGAAGAATATGAAATTTGTA+AGG - chr5_4:37784853-37784872 None:intergenic 20.0%
!!! AATTCCAACTAATTTTTTTC+TGG - chr5_4:37783842-37783861 None:intergenic 20.0%
!! TCAAACAAATCATGAAATTA+GGG - chr5_4:37784264-37784283 None:intergenic 20.0%
!! ATCAAACAAATCATGAAATT+AGG - chr5_4:37784265-37784284 None:intergenic 20.0%
!!! CAATGTTTTAGAATTACATT+TGG - chr5_4:37784424-37784443 None:intergenic 20.0%
!! ATCAAAAGTTTCTTATCAAT+TGG - chr5_4:37784606-37784625 None:intergenic 20.0%
!! AAGAATATGAAATTTGTAAG+GGG - chr5_4:37784851-37784870 None:intergenic 20.0%
!! GAAGAATATGAAATTTGTAA+GGG - chr5_4:37784852-37784871 None:intergenic 20.0%
!! AGAAGAATATGAAATTTGTA+AGG - chr5_4:37784853-37784872 None:intergenic 20.0%
! AAAAATTAGTTGGAATTTGC+AGG + chr5_4:37783845-37783864 Msa0849880:CDS 25.0%
!!! AACAATCGATTCTAAAATGT+TGG - chr5_4:37784475-37784494 None:intergenic 25.0%
! AATTAACCTATGATAAAGAG+GGG - chr5_4:37784697-37784716 None:intergenic 25.0%
! CAATTAACCTATGATAAAGA+GGG - chr5_4:37784698-37784717 None:intergenic 25.0%
! CTCTTTATCATAGGTTAATT+GGG + chr5_4:37784697-37784716 Msa0849880:intron 25.0%
! AGAATATGAAATTTGTAAGG+GGG - chr5_4:37784850-37784869 None:intergenic 25.0%
! AAGAATCTGATACAGATAAA+TGG - chr5_4:37785028-37785047 None:intergenic 25.0%
! AAAAATTAGTTGGAATTTGC+AGG + chr5_4:37783845-37783864 Msa0849880:CDS 25.0%
!!! AACAATCGATTCTAAAATGT+TGG - chr5_4:37784475-37784494 None:intergenic 25.0%
! AATTAACCTATGATAAAGAG+GGG - chr5_4:37784697-37784716 None:intergenic 25.0%
! CAATTAACCTATGATAAAGA+GGG - chr5_4:37784698-37784717 None:intergenic 25.0%
! CTCTTTATCATAGGTTAATT+GGG + chr5_4:37784697-37784716 Msa0849880:intron 25.0%
! AGAATATGAAATTTGTAAGG+GGG - chr5_4:37784850-37784869 None:intergenic 25.0%
! AAGAATCTGATACAGATAAA+TGG - chr5_4:37785028-37785047 None:intergenic 25.0%
CATGAAAACAACAGAATCTT+TGG - chr5_4:37783809-37783828 None:intergenic 30.0%
TCTGCCAGAAAAAAATTAGT+TGG + chr5_4:37783835-37783854 Msa0849880:CDS 30.0%
AAAGACATATTATCAGCCTA+GGG + chr5_4:37784115-37784134 Msa0849880:intron 30.0%
! GTTTGATAATTGTGTTGAAG+TGG + chr5_4:37784278-37784297 Msa0849880:intron 30.0%
ACTTAGTAGATTCTTCTGTT+TGG + chr5_4:37784363-37784382 Msa0849880:intron 30.0%
! ACATTTGGAACTTATCCTAT+AGG - chr5_4:37784409-37784428 None:intergenic 30.0%
TACAATGAGAAATGCTTAGA+AGG - chr5_4:37784539-37784558 None:intergenic 30.0%
TATGATAAAGAGGGGAAAAA+TGG - chr5_4:37784689-37784708 None:intergenic 30.0%
! ATTTTTCCCCTCTTTATCAT+AGG + chr5_4:37784688-37784707 Msa0849880:intron 30.0%
CCAATTAACCTATGATAAAG+AGG - chr5_4:37784699-37784718 None:intergenic 30.0%
CCTCTTTATCATAGGTTAAT+TGG + chr5_4:37784696-37784715 Msa0849880:intron 30.0%
TTATCATAGGTTAATTGGGA+TGG + chr5_4:37784701-37784720 Msa0849880:intron 30.0%
ATACAAACATAGTCAATCCT+TGG + chr5_4:37784745-37784764 Msa0849880:CDS 30.0%
!!! GTCTAGGACTTTTTTTTGAA+GGG - chr5_4:37784812-37784831 None:intergenic 30.0%
!!! TGTCTAGGACTTTTTTTTGA+AGG - chr5_4:37784813-37784832 None:intergenic 30.0%
ATTGTTGAATTAGGTAACTC+TGG - chr5_4:37784936-37784955 None:intergenic 30.0%
AGAGTTACCTAATTCAACAA+TGG + chr5_4:37784935-37784954 Msa0849880:CDS 30.0%
GAGTTACCTAATTCAACAAT+GGG + chr5_4:37784936-37784955 Msa0849880:CDS 30.0%
!! TTCAAAAGCATTGAATGACA+AGG + chr5_4:37785046-37785065 Msa0849880:CDS 30.0%
!! TCAAAAGCATTGAATGACAA+GGG + chr5_4:37785047-37785066 Msa0849880:CDS 30.0%
CATGAAAACAACAGAATCTT+TGG - chr5_4:37783809-37783828 None:intergenic 30.0%
TCTGCCAGAAAAAAATTAGT+TGG + chr5_4:37783835-37783854 Msa0849880:CDS 30.0%
AAAGACATATTATCAGCCTA+GGG + chr5_4:37784115-37784134 Msa0849880:intron 30.0%
! GTTTGATAATTGTGTTGAAG+TGG + chr5_4:37784278-37784297 Msa0849880:intron 30.0%
ACTTAGTAGATTCTTCTGTT+TGG + chr5_4:37784363-37784382 Msa0849880:intron 30.0%
! ACATTTGGAACTTATCCTAT+AGG - chr5_4:37784409-37784428 None:intergenic 30.0%
TACAATGAGAAATGCTTAGA+AGG - chr5_4:37784539-37784558 None:intergenic 30.0%
TATGATAAAGAGGGGAAAAA+TGG - chr5_4:37784689-37784708 None:intergenic 30.0%
! ATTTTTCCCCTCTTTATCAT+AGG + chr5_4:37784688-37784707 Msa0849880:intron 30.0%
CCAATTAACCTATGATAAAG+AGG - chr5_4:37784699-37784718 None:intergenic 30.0%
CCTCTTTATCATAGGTTAAT+TGG + chr5_4:37784696-37784715 Msa0849880:intron 30.0%
TTATCATAGGTTAATTGGGA+TGG + chr5_4:37784701-37784720 Msa0849880:intron 30.0%
ATACAAACATAGTCAATCCT+TGG + chr5_4:37784745-37784764 Msa0849880:CDS 30.0%
!!! GTCTAGGACTTTTTTTTGAA+GGG - chr5_4:37784812-37784831 None:intergenic 30.0%
!!! TGTCTAGGACTTTTTTTTGA+AGG - chr5_4:37784813-37784832 None:intergenic 30.0%
ATTGTTGAATTAGGTAACTC+TGG - chr5_4:37784936-37784955 None:intergenic 30.0%
AGAGTTACCTAATTCAACAA+TGG + chr5_4:37784935-37784954 Msa0849880:CDS 30.0%
GAGTTACCTAATTCAACAAT+GGG + chr5_4:37784936-37784955 Msa0849880:CDS 30.0%
!! TTCAAAAGCATTGAATGACA+AGG + chr5_4:37785046-37785065 Msa0849880:CDS 30.0%
!! TCAAAAGCATTGAATGACAA+GGG + chr5_4:37785047-37785066 Msa0849880:CDS 30.0%
!! TGTTGTGAGAGTTTTGACAT+AGG - chr5_4:37783596-37783615 None:intergenic 35.0%
TTGTGTATTATCCAACAGCT+AGG + chr5_4:37783974-37783993 Msa0849880:CDS 35.0%
ATTATCCAACAGCTAGGAAA+TGG + chr5_4:37783980-37783999 Msa0849880:CDS 35.0%
! GAAATGGTGTGATTTTGTGA+TGG + chr5_4:37783996-37784015 Msa0849880:CDS 35.0%
GTAGATGATTCCTTGAAGAT+TGG + chr5_4:37784035-37784054 Msa0849880:intron 35.0%
ATGATTCCTTGAAGATTGGT+TGG + chr5_4:37784039-37784058 Msa0849880:intron 35.0%
! TGATTCCTTGAAGATTGGTT+GGG + chr5_4:37784040-37784059 Msa0849880:intron 35.0%
CAAAGACATATTATCAGCCT+AGG + chr5_4:37784114-37784133 Msa0849880:intron 35.0%
AAGACATATTATCAGCCTAG+GGG + chr5_4:37784116-37784135 Msa0849880:intron 35.0%
ATTCTTCCAATGTCCCTAAT+TGG + chr5_4:37784161-37784180 Msa0849880:intron 35.0%
!! CGATTCTAAAATGTTGGAGA+TGG - chr5_4:37784469-37784488 None:intergenic 35.0%
AAACACTCCTATTGCTAAGT+AGG + chr5_4:37784558-37784577 Msa0849880:intron 35.0%
TCAAGATCCTACTTAGCAAT+AGG - chr5_4:37784568-37784587 None:intergenic 35.0%
!!! GGACTTTTTTTTGAAGGGAA+TGG - chr5_4:37784807-37784826 None:intergenic 35.0%
AAGGATCCCATTGTTGAATT+AGG - chr5_4:37784945-37784964 None:intergenic 35.0%
TATCAGAATCCAACCATGTT+TGG - chr5_4:37784971-37784990 None:intergenic 35.0%
!!! GATTCTGATACTTTTTCAGC+TGG + chr5_4:37784981-37785000 Msa0849880:CDS 35.0%
ATACATTGGCAGTCCTAAAT+CGG + chr5_4:37785133-37785152 Msa0849880:CDS 35.0%
!! TGTTGTGAGAGTTTTGACAT+AGG - chr5_4:37783596-37783615 None:intergenic 35.0%
TTGTGTATTATCCAACAGCT+AGG + chr5_4:37783974-37783993 Msa0849880:CDS 35.0%
ATTATCCAACAGCTAGGAAA+TGG + chr5_4:37783980-37783999 Msa0849880:CDS 35.0%
! GAAATGGTGTGATTTTGTGA+TGG + chr5_4:37783996-37784015 Msa0849880:CDS 35.0%
GTAGATGATTCCTTGAAGAT+TGG + chr5_4:37784035-37784054 Msa0849880:intron 35.0%
ATGATTCCTTGAAGATTGGT+TGG + chr5_4:37784039-37784058 Msa0849880:intron 35.0%
! TGATTCCTTGAAGATTGGTT+GGG + chr5_4:37784040-37784059 Msa0849880:intron 35.0%
CAAAGACATATTATCAGCCT+AGG + chr5_4:37784114-37784133 Msa0849880:intron 35.0%
AAGACATATTATCAGCCTAG+GGG + chr5_4:37784116-37784135 Msa0849880:intron 35.0%
ATTCTTCCAATGTCCCTAAT+TGG + chr5_4:37784161-37784180 Msa0849880:intron 35.0%
!! CGATTCTAAAATGTTGGAGA+TGG - chr5_4:37784469-37784488 None:intergenic 35.0%
AAACACTCCTATTGCTAAGT+AGG + chr5_4:37784558-37784577 Msa0849880:intron 35.0%
TCAAGATCCTACTTAGCAAT+AGG - chr5_4:37784568-37784587 None:intergenic 35.0%
!!! GGACTTTTTTTTGAAGGGAA+TGG - chr5_4:37784807-37784826 None:intergenic 35.0%
AAGGATCCCATTGTTGAATT+AGG - chr5_4:37784945-37784964 None:intergenic 35.0%
TATCAGAATCCAACCATGTT+TGG - chr5_4:37784971-37784990 None:intergenic 35.0%
!!! GATTCTGATACTTTTTCAGC+TGG + chr5_4:37784981-37785000 Msa0849880:CDS 35.0%
ATACATTGGCAGTCCTAAAT+CGG + chr5_4:37785133-37785152 Msa0849880:CDS 35.0%
GTAACGATCGTAAAGACACT+GGG - chr5_4:37783422-37783441 None:intergenic 40.0%
AGTAACGATCGTAAAGACAC+TGG - chr5_4:37783423-37783442 None:intergenic 40.0%
GAAAAGATGCATGGAAAGGA+TGG - chr5_4:37783448-37783467 None:intergenic 40.0%
! TTTCCATGCATCTTTTCAGC+CGG + chr5_4:37783451-37783470 Msa0849880:CDS 40.0%
!! AGTGAGAGCATCAACAAATC+CGG - chr5_4:37783473-37783492 None:intergenic 40.0%
TATTTCCATCGTCGTCTTCT+TGG - chr5_4:37783567-37783586 None:intergenic 40.0%
GATCTTTCCAAAGCTTGACT+TGG + chr5_4:37783663-37783682 Msa0849880:CDS 40.0%
!!! CCATTCTTGGCTTTTAAGGT+CGG - chr5_4:37783713-37783732 None:intergenic 40.0%
CGACCTTAAAAGCCAAGAAT+GGG + chr5_4:37783711-37783730 Msa0849880:CDS 40.0%
GACCTTAAAAGCCAAGAATG+GGG + chr5_4:37783712-37783731 Msa0849880:CDS 40.0%
ACCTTAAAAGCCAAGAATGG+GGG + chr5_4:37783713-37783732 Msa0849880:CDS 40.0%
TAGTCTACTGAGTTTCACGT+AGG - chr5_4:37783743-37783762 None:intergenic 40.0%
AAACTCAGTAGACTACGTAC+TGG + chr5_4:37783748-37783767 Msa0849880:CDS 40.0%
CAGGAATTTAACTGAGAGTG+CGG + chr5_4:37783906-37783925 Msa0849880:CDS 40.0%
!!! GGTTTTGAATGCAGTGGAAT+TGG + chr5_4:37783927-37783946 Msa0849880:CDS 40.0%
TTTGAATGCAGTGGAATTGG+CGG + chr5_4:37783930-37783949 Msa0849880:CDS 40.0%
!! TTGTGATGGATGCTATGCTA+AGG + chr5_4:37784010-37784029 Msa0849880:CDS 40.0%
AGATTCCCAACCAATCTTCA+AGG - chr5_4:37784048-37784067 None:intergenic 40.0%
! TTGAAGATTGGTTGGGAATC+TGG + chr5_4:37784047-37784066 Msa0849880:intron 40.0%
AGACATATTATCAGCCTAGG+GGG + chr5_4:37784117-37784136 Msa0849880:intron 40.0%
!! AAGCTAGCTTTGTGTCCTAT+AGG + chr5_4:37784391-37784410 Msa0849880:intron 40.0%
AAACATAGTCAATCCTTGGC+AGG + chr5_4:37784749-37784768 Msa0849880:CDS 40.0%
ACTCTGGCATAGCAATGAAA+GGG - chr5_4:37784920-37784939 None:intergenic 40.0%
AACTCTGGCATAGCAATGAA+AGG - chr5_4:37784921-37784940 None:intergenic 40.0%
ATCCTTGAACCAAACATGGT+TGG + chr5_4:37784959-37784978 Msa0849880:CDS 40.0%
! ATCCAACCATGTTTGGTTCA+AGG - chr5_4:37784964-37784983 None:intergenic 40.0%
TACAGATAAATGGTCATGCC+TGG - chr5_4:37785018-37785037 None:intergenic 40.0%
TTTCATCGGGAACAGTACAA+TGG + chr5_4:37785076-37785095 Msa0849880:CDS 40.0%
TCTGACACAGAGCTATACAT+TGG + chr5_4:37785119-37785138 Msa0849880:CDS 40.0%
GTAACGATCGTAAAGACACT+GGG - chr5_4:37783422-37783441 None:intergenic 40.0%
AGTAACGATCGTAAAGACAC+TGG - chr5_4:37783423-37783442 None:intergenic 40.0%
GAAAAGATGCATGGAAAGGA+TGG - chr5_4:37783448-37783467 None:intergenic 40.0%
! TTTCCATGCATCTTTTCAGC+CGG + chr5_4:37783451-37783470 Msa0849880:CDS 40.0%
!! AGTGAGAGCATCAACAAATC+CGG - chr5_4:37783473-37783492 None:intergenic 40.0%
TATTTCCATCGTCGTCTTCT+TGG - chr5_4:37783567-37783586 None:intergenic 40.0%
GATCTTTCCAAAGCTTGACT+TGG + chr5_4:37783663-37783682 Msa0849880:CDS 40.0%
!!! CCATTCTTGGCTTTTAAGGT+CGG - chr5_4:37783713-37783732 None:intergenic 40.0%
CGACCTTAAAAGCCAAGAAT+GGG + chr5_4:37783711-37783730 Msa0849880:CDS 40.0%
GACCTTAAAAGCCAAGAATG+GGG + chr5_4:37783712-37783731 Msa0849880:CDS 40.0%
ACCTTAAAAGCCAAGAATGG+GGG + chr5_4:37783713-37783732 Msa0849880:CDS 40.0%
TAGTCTACTGAGTTTCACGT+AGG - chr5_4:37783743-37783762 None:intergenic 40.0%
AAACTCAGTAGACTACGTAC+TGG + chr5_4:37783748-37783767 Msa0849880:CDS 40.0%
CAGGAATTTAACTGAGAGTG+CGG + chr5_4:37783906-37783925 Msa0849880:CDS 40.0%
!!! GGTTTTGAATGCAGTGGAAT+TGG + chr5_4:37783927-37783946 Msa0849880:CDS 40.0%
TTTGAATGCAGTGGAATTGG+CGG + chr5_4:37783930-37783949 Msa0849880:CDS 40.0%
!! TTGTGATGGATGCTATGCTA+AGG + chr5_4:37784010-37784029 Msa0849880:CDS 40.0%
AGATTCCCAACCAATCTTCA+AGG - chr5_4:37784048-37784067 None:intergenic 40.0%
! TTGAAGATTGGTTGGGAATC+TGG + chr5_4:37784047-37784066 Msa0849880:intron 40.0%
AGACATATTATCAGCCTAGG+GGG + chr5_4:37784117-37784136 Msa0849880:intron 40.0%
!! AAGCTAGCTTTGTGTCCTAT+AGG + chr5_4:37784391-37784410 Msa0849880:intron 40.0%
AAACATAGTCAATCCTTGGC+AGG + chr5_4:37784749-37784768 Msa0849880:CDS 40.0%
ACTCTGGCATAGCAATGAAA+GGG - chr5_4:37784920-37784939 None:intergenic 40.0%
AACTCTGGCATAGCAATGAA+AGG - chr5_4:37784921-37784940 None:intergenic 40.0%
ATCCTTGAACCAAACATGGT+TGG + chr5_4:37784959-37784978 Msa0849880:CDS 40.0%
! ATCCAACCATGTTTGGTTCA+AGG - chr5_4:37784964-37784983 None:intergenic 40.0%
TACAGATAAATGGTCATGCC+TGG - chr5_4:37785018-37785037 None:intergenic 40.0%
TTTCATCGGGAACAGTACAA+TGG + chr5_4:37785076-37785095 Msa0849880:CDS 40.0%
TCTGACACAGAGCTATACAT+TGG + chr5_4:37785119-37785138 Msa0849880:CDS 40.0%
GGAGATTGTTACACCGTTAG+GGG - chr5_4:37783401-37783420 None:intergenic 45.0%
GGGAGATTGTTACACCGTTA+GGG - chr5_4:37783402-37783421 None:intergenic 45.0%
TGGGAGATTGTTACACCGTT+AGG - chr5_4:37783403-37783422 None:intergenic 45.0%
GGCTGAAAAGATGCATGGAA+AGG - chr5_4:37783452-37783471 None:intergenic 45.0%
AATCCGGCTGAAAAGATGCA+TGG - chr5_4:37783457-37783476 None:intergenic 45.0%
TGTTGATGCTCTCACTGATG+AGG + chr5_4:37783477-37783496 Msa0849880:CDS 45.0%
ATCAAGTCAGCGCATTCATG+AGG - chr5_4:37783646-37783665 None:intergenic 45.0%
GACTTCACCAAGTCAAGCTT+TGG - chr5_4:37783673-37783692 None:intergenic 45.0%
CCGACCTTAAAAGCCAAGAA+TGG + chr5_4:37783710-37783729 Msa0849880:CDS 45.0%
!! ACCCCCATTCTTGGCTTTTA+AGG - chr5_4:37783717-37783736 None:intergenic 45.0%
TCACACCATTTCCTAGCTGT+TGG - chr5_4:37783988-37784007 None:intergenic 45.0%
AATGCGCCAATTAGGGACAT+TGG - chr5_4:37784170-37784189 None:intergenic 45.0%
CCTCAAGAATGCGCCAATTA+GGG - chr5_4:37784177-37784196 None:intergenic 45.0%
ACCTCAAGAATGCGCCAATT+AGG - chr5_4:37784178-37784197 None:intergenic 45.0%
GTTGGAGATGGAGACTCTAA+TGG - chr5_4:37784457-37784476 None:intergenic 45.0%
GGGAATGGTAGATCTAGTGA+AGG - chr5_4:37784792-37784811 None:intergenic 45.0%
GAAGAACACTGAGCATGTCT+AGG - chr5_4:37784828-37784847 None:intergenic 45.0%
AATTGAGGCACGGTAATTGG+CGG - chr5_4:37784876-37784895 None:intergenic 45.0%
GGTAATTGAGGCACGGTAAT+TGG - chr5_4:37784879-37784898 None:intergenic 45.0%
ATAGCAATGAAAGGGGAAGC+TGG - chr5_4:37784912-37784931 None:intergenic 45.0%
CTCTGGCATAGCAATGAAAG+GGG - chr5_4:37784919-37784938 None:intergenic 45.0%
TGGGATCCTTGAACCAAACA+TGG + chr5_4:37784955-37784974 Msa0849880:CDS 45.0%
!!! TACTTTTTCAGCTGGCATGC+AGG + chr5_4:37784989-37785008 Msa0849880:CDS 45.0%
!!! ACTTTTTCAGCTGGCATGCA+GGG + chr5_4:37784990-37785009 Msa0849880:CDS 45.0%
GCATTGAATGACAAGGGTGA+TGG + chr5_4:37785053-37785072 Msa0849880:CDS 45.0%
! GACAAGGGTGATGGTTTCAT+CGG + chr5_4:37785062-37785081 Msa0849880:CDS 45.0%
! ACAAGGGTGATGGTTTCATC+GGG + chr5_4:37785063-37785082 Msa0849880:CDS 45.0%
AGTACAATGGCAGGGTTTAG+TGG + chr5_4:37785089-37785108 Msa0849880:CDS 45.0%
GGAGATTGTTACACCGTTAG+GGG - chr5_4:37783401-37783420 None:intergenic 45.0%
GGGAGATTGTTACACCGTTA+GGG - chr5_4:37783402-37783421 None:intergenic 45.0%
TGGGAGATTGTTACACCGTT+AGG - chr5_4:37783403-37783422 None:intergenic 45.0%
GGCTGAAAAGATGCATGGAA+AGG - chr5_4:37783452-37783471 None:intergenic 45.0%
AATCCGGCTGAAAAGATGCA+TGG - chr5_4:37783457-37783476 None:intergenic 45.0%
TGTTGATGCTCTCACTGATG+AGG + chr5_4:37783477-37783496 Msa0849880:CDS 45.0%
ATCAAGTCAGCGCATTCATG+AGG - chr5_4:37783646-37783665 None:intergenic 45.0%
GACTTCACCAAGTCAAGCTT+TGG - chr5_4:37783673-37783692 None:intergenic 45.0%
CCGACCTTAAAAGCCAAGAA+TGG + chr5_4:37783710-37783729 Msa0849880:CDS 45.0%
!! ACCCCCATTCTTGGCTTTTA+AGG - chr5_4:37783717-37783736 None:intergenic 45.0%
TCACACCATTTCCTAGCTGT+TGG - chr5_4:37783988-37784007 None:intergenic 45.0%
AATGCGCCAATTAGGGACAT+TGG - chr5_4:37784170-37784189 None:intergenic 45.0%
CCTCAAGAATGCGCCAATTA+GGG - chr5_4:37784177-37784196 None:intergenic 45.0%
ACCTCAAGAATGCGCCAATT+AGG - chr5_4:37784178-37784197 None:intergenic 45.0%
GTTGGAGATGGAGACTCTAA+TGG - chr5_4:37784457-37784476 None:intergenic 45.0%
GGGAATGGTAGATCTAGTGA+AGG - chr5_4:37784792-37784811 None:intergenic 45.0%
GAAGAACACTGAGCATGTCT+AGG - chr5_4:37784828-37784847 None:intergenic 45.0%
AATTGAGGCACGGTAATTGG+CGG - chr5_4:37784876-37784895 None:intergenic 45.0%
GGTAATTGAGGCACGGTAAT+TGG - chr5_4:37784879-37784898 None:intergenic 45.0%
ATAGCAATGAAAGGGGAAGC+TGG - chr5_4:37784912-37784931 None:intergenic 45.0%
CTCTGGCATAGCAATGAAAG+GGG - chr5_4:37784919-37784938 None:intergenic 45.0%
TGGGATCCTTGAACCAAACA+TGG + chr5_4:37784955-37784974 Msa0849880:CDS 45.0%
!!! TACTTTTTCAGCTGGCATGC+AGG + chr5_4:37784989-37785008 Msa0849880:CDS 45.0%
!!! ACTTTTTCAGCTGGCATGCA+GGG + chr5_4:37784990-37785009 Msa0849880:CDS 45.0%
GCATTGAATGACAAGGGTGA+TGG + chr5_4:37785053-37785072 Msa0849880:CDS 45.0%
! GACAAGGGTGATGGTTTCAT+CGG + chr5_4:37785062-37785081 Msa0849880:CDS 45.0%
! ACAAGGGTGATGGTTTCATC+GGG + chr5_4:37785063-37785082 Msa0849880:CDS 45.0%
AGTACAATGGCAGGGTTTAG+TGG + chr5_4:37785089-37785108 Msa0849880:CDS 45.0%
CATGCATGTCGTTCCCCTAA+CGG + chr5_4:37783385-37783404 Msa0849880:CDS 50.0%
AACAGGAGGAGGAGGATCTT+GGG - chr5_4:37783536-37783555 None:intergenic 50.0%
TCTTCTTGGCCAGGAACAAC+AGG - chr5_4:37783553-37783572 None:intergenic 50.0%
! TCAGTAGACTACGTACTGGC+TGG + chr5_4:37783752-37783771 Msa0849880:CDS 50.0%
TTTCACCTGCTTCAGCTGCA+GGG - chr5_4:37783882-37783901 None:intergenic 50.0%
!!! GAGTGCGGTTTTGAATGCAG+TGG + chr5_4:37783921-37783940 Msa0849880:CDS 50.0%
CCCTAATTGGCGCATTCTTG+AGG + chr5_4:37784174-37784193 Msa0849880:intron 50.0%
TTGCAAGCTTCAACCTGCCA+AGG - chr5_4:37784765-37784784 None:intergenic 50.0%
ATCGGGAACAGTACAATGGC+AGG + chr5_4:37785080-37785099 Msa0849880:CDS 50.0%
TCGGGAACAGTACAATGGCA+GGG + chr5_4:37785081-37785100 Msa0849880:CDS 50.0%
! GGCAACAAGTCAGCCGATTT+AGG - chr5_4:37785149-37785168 None:intergenic 50.0%
CATGCATGTCGTTCCCCTAA+CGG + chr5_4:37783385-37783404 Msa0849880:CDS 50.0%
AACAGGAGGAGGAGGATCTT+GGG - chr5_4:37783536-37783555 None:intergenic 50.0%
TCTTCTTGGCCAGGAACAAC+AGG - chr5_4:37783553-37783572 None:intergenic 50.0%
! TCAGTAGACTACGTACTGGC+TGG + chr5_4:37783752-37783771 Msa0849880:CDS 50.0%
TTTCACCTGCTTCAGCTGCA+GGG - chr5_4:37783882-37783901 None:intergenic 50.0%
!!! GAGTGCGGTTTTGAATGCAG+TGG + chr5_4:37783921-37783940 Msa0849880:CDS 50.0%
CCCTAATTGGCGCATTCTTG+AGG + chr5_4:37784174-37784193 Msa0849880:intron 50.0%
TTGCAAGCTTCAACCTGCCA+AGG - chr5_4:37784765-37784784 None:intergenic 50.0%
ATCGGGAACAGTACAATGGC+AGG + chr5_4:37785080-37785099 Msa0849880:CDS 50.0%
TCGGGAACAGTACAATGGCA+GGG + chr5_4:37785081-37785100 Msa0849880:CDS 50.0%
! GGCAACAAGTCAGCCGATTT+AGG - chr5_4:37785149-37785168 None:intergenic 50.0%
TACCGGAGTGAGGAGCAGTT+TGG - chr5_4:37783509-37783528 None:intergenic 55.0%
GGAGGATCTTGGGCAGTTAC+CGG - chr5_4:37783526-37783545 None:intergenic 55.0%
CAACAGGAGGAGGAGGATCT+TGG - chr5_4:37783537-37783556 None:intergenic 55.0%
TCTTGGCCAGGAACAACAGG+AGG - chr5_4:37783550-37783569 None:intergenic 55.0%
CGTAGGTACACCCCCATTCT+TGG - chr5_4:37783726-37783745 None:intergenic 55.0%
AACTTCCCTGCAGCTGAAGC+AGG + chr5_4:37783874-37783893 Msa0849880:CDS 55.0%
CTTTCACCTGCTTCAGCTGC+AGG - chr5_4:37783883-37783902 None:intergenic 55.0%
GCAGCTGAAGCAGGTGAAAG+AGG + chr5_4:37783883-37783902 Msa0849880:CDS 55.0%
CTGAAGCAGGTGAAAGAGGC+AGG + chr5_4:37783887-37783906 Msa0849880:CDS 55.0%
ACAGTAGAGACTGTCCCCCT+AGG - chr5_4:37784134-37784153 None:intergenic 55.0%
TGGAGGCGGTAATTGAGGCA+CGG - chr5_4:37784886-37784905 None:intergenic 55.0%
ATGAAAGGGGAAGCTGGTGG+TGG - chr5_4:37784906-37784925 None:intergenic 55.0%
GCAATGAAAGGGGAAGCTGG+TGG - chr5_4:37784909-37784928 None:intergenic 55.0%
TACCGGAGTGAGGAGCAGTT+TGG - chr5_4:37783509-37783528 None:intergenic 55.0%
GGAGGATCTTGGGCAGTTAC+CGG - chr5_4:37783526-37783545 None:intergenic 55.0%
CAACAGGAGGAGGAGGATCT+TGG - chr5_4:37783537-37783556 None:intergenic 55.0%
TCTTGGCCAGGAACAACAGG+AGG - chr5_4:37783550-37783569 None:intergenic 55.0%
CGTAGGTACACCCCCATTCT+TGG - chr5_4:37783726-37783745 None:intergenic 55.0%
AACTTCCCTGCAGCTGAAGC+AGG + chr5_4:37783874-37783893 Msa0849880:CDS 55.0%
CTTTCACCTGCTTCAGCTGC+AGG - chr5_4:37783883-37783902 None:intergenic 55.0%
GCAGCTGAAGCAGGTGAAAG+AGG + chr5_4:37783883-37783902 Msa0849880:CDS 55.0%
CTGAAGCAGGTGAAAGAGGC+AGG + chr5_4:37783887-37783906 Msa0849880:CDS 55.0%
ACAGTAGAGACTGTCCCCCT+AGG - chr5_4:37784134-37784153 None:intergenic 55.0%
TGGAGGCGGTAATTGAGGCA+CGG - chr5_4:37784886-37784905 None:intergenic 55.0%
ATGAAAGGGGAAGCTGGTGG+TGG - chr5_4:37784906-37784925 None:intergenic 55.0%
GCAATGAAAGGGGAAGCTGG+TGG - chr5_4:37784909-37784928 None:intergenic 55.0%
CGCCAAACTGCTCCTCACTC+CGG + chr5_4:37783504-37783523 Msa0849880:CDS 60.0%
CTTGGGCAGTTACCGGAGTG+AGG - chr5_4:37783519-37783538 None:intergenic 60.0%
CCAGGAACAACAGGAGGAGG+AGG - chr5_4:37783544-37783563 None:intergenic 60.0%
CCTCCTCCTCCTGTTGTTCC+TGG + chr5_4:37783541-37783560 Msa0849880:CDS 60.0%
TGGCCAGGAACAACAGGAGG+AGG - chr5_4:37783547-37783566 None:intergenic 60.0%
CCATCGTCGTCTTCTTGGCC+AGG - chr5_4:37783562-37783581 None:intergenic 60.0%
CCTGGCCAAGAAGACGACGA+TGG + chr5_4:37783559-37783578 Msa0849880:CDS 60.0%
!! GGTGGTGGAGGCGGTAATTG+AGG - chr5_4:37784891-37784910 None:intergenic 60.0%
!! AAAGGGGAAGCTGGTGGTGG+AGG - chr5_4:37784903-37784922 None:intergenic 60.0%
CGCCAAACTGCTCCTCACTC+CGG + chr5_4:37783504-37783523 Msa0849880:CDS 60.0%
CTTGGGCAGTTACCGGAGTG+AGG - chr5_4:37783519-37783538 None:intergenic 60.0%
CCAGGAACAACAGGAGGAGG+AGG - chr5_4:37783544-37783563 None:intergenic 60.0%
CCTCCTCCTCCTGTTGTTCC+TGG + chr5_4:37783541-37783560 Msa0849880:CDS 60.0%
TGGCCAGGAACAACAGGAGG+AGG - chr5_4:37783547-37783566 None:intergenic 60.0%
CCATCGTCGTCTTCTTGGCC+AGG - chr5_4:37783562-37783581 None:intergenic 60.0%
CCTGGCCAAGAAGACGACGA+TGG + chr5_4:37783559-37783578 Msa0849880:CDS 60.0%
!! GGTGGTGGAGGCGGTAATTG+AGG - chr5_4:37784891-37784910 None:intergenic 60.0%
!! AAAGGGGAAGCTGGTGGTGG+AGG - chr5_4:37784903-37784922 None:intergenic 60.0%
!! GGGGAAGCTGGTGGTGGAGG+CGG - chr5_4:37784900-37784919 None:intergenic 70.0%
CAGCTGGCATGCAGGGAGCC+AGG + chr5_4:37784997-37785016 Msa0849880:CDS 70.0%
!! GGGGAAGCTGGTGGTGGAGG+CGG - chr5_4:37784900-37784919 None:intergenic 70.0%
CAGCTGGCATGCAGGGAGCC+AGG + chr5_4:37784997-37785016 Msa0849880:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 37783379 37785175 37783379 ID=Msa0849880;Name=Msa0849880
chr5_4 mRNA 37783379 37785175 37783379 ID=Msa0849880-mRNA-1;Parent=Msa0849880;Name=Msa0849880-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|2|0|372
chr5_4 exon 37783379 37784031 37783379 ID=Msa0849880-mRNA-1:exon:12246;Parent=Msa0849880-mRNA-1
chr5_4 exon 37784710 37785175 37784710 ID=Msa0849880-mRNA-1:exon:12247;Parent=Msa0849880-mRNA-1
chr5_4 CDS 37783379 37784031 37783379 ID=Msa0849880-mRNA-1:cds;Parent=Msa0849880-mRNA-1
chr5_4 CDS 37784710 37785175 37784710 ID=Msa0849880-mRNA-1:cds;Parent=Msa0849880-mRNA-1
Gene Sequence

>Msa0849880

TTGGAACATGCATGTCGTTCCCCTAACGGTGTAACAATCTCCCAGTGTCTTTACGATCGTTACTGTCCATCCTTTCCATGCATCTTTTCAGCCGGATTTGTTGATGCTCTCACTGATGAGGTTTTCGCCAAACTGCTCCTCACTCCGGTAACTGCCCAAGATCCTCCTCCTCCTGTTGTTCCTGGCCAAGAAGACGACGATGGAAATAATCTTTCCTATGTCAAAACTCTCACAACAACTGATACTAAATCTGTATTTAATATACCTCATGAATGCGCTGACTTGATCTTTCCAAAGCTTGACTTGGTGAAGTCTCAAAACATCACTGTCACCGACCTTAAAAGCCAAGAATGGGGGTGTACCTACGTGAAACTCAGTAGACTACGTACTGGCTGGTCTCACTTTGTGAAAGAGAAGAAACTCGTCGCCAAAGATTCTGTTGTTTTCATGAAAAACTCTGCCAGAAAAAAATTAGTTGGAATTTGCAGGAACACTAACTTCCCTGCAGCTGAAGCAGGTGAAAGAGGCAGGAATTTAACTGAGAGTGCGGTTTTGAATGCAGTGGAATTGGCGGACAAGAACATGCAGTTTGAAGTTGTGTATTATCCAACAGCTAGGAAATGGTGTGATTTTGTGATGGATGCTATGCTAAGGTTAATTGGGATGGACCTAAATAAAATCTTGCAAAATACAAACATAGTCAATCCTTGGCAGGTTGAAGCTTGCAACATACCTTCACTAGATCTACCATTCCCTTCAAAAAAAAGTCCTAGACATGCTCAGTGTTCTTCCCCCTTACAAATTTCATATTCTTCTCCGCCAATTACCGTGCCTCAATTACCGCCTCCACCACCAGCTTCCCCTTTCATTGCTATGCCAGAGTTACCTAATTCAACAATGGGATCCTTGAACCAAACATGGTTGGATTCTGATACTTTTTCAGCTGGCATGCAGGGAGCCAGGCATGACCATTTATCTGTATCAGATTCTTCAAAAGCATTGAATGACAAGGGTGATGGTTTCATCGGGAACAGTACAATGGCAGGGTTTAGTGGTACTTTCTCTGACACAGAGCTATACATTGGCAGTCCTAAATCGGCTGACTTGTTGCCTCAATGA
Protein sequence

>Msa0849880

LEHACRSPNGVTISQCLYDRYCPSFPCIFSAGFVDALTDEVFAKLLLTPVTAQDPPPPVVPGQEDDDGNNLSYVKTLTTTDTKSVFNIPHECADLIFPKLDLVKSQNITVTDLKSQEWGCTYVKLSRLRTGWSHFVKEKKLVAKDSVVFMKNSARKKLVGICRNTNFPAAEAGERGRNLTESAVLNAVELADKNMQFEVVYYPTARKWCDFVMDAMLRLIGMDLNKILQNTNIVNPWQVEACNIPSLDLPFPSKKSPRHAQCSSPLQISYSSPPITVPQLPPPPPASPFIAMPELPNSTMGSLNQTWLDSDTFSAGMQGARHDHLSVSDSSKALNDKGDGFIGNSTMAGFSGTFSDTELYIGSPKSADLLPQ*