AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0853090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0853090 MtrunA17_Chr5g0429661 94.085 355 19 2 1 353 1 355 0.0 684
Msa0853090 MtrunA17_Chr4g0058991 60.563 142 49 1 109 250 197 331 2.33e-57 192
Msa0853090 MtrunA17_Chr3g0104501 56.284 183 56 8 11 172 5 184 2.90e-57 184
Msa0853090 MtrunA17_Chr3g0117511 44.664 253 100 8 119 350 181 414 7.14e-56 188
Msa0853090 MtrunA17_Chr7g0228531 60.630 127 47 2 119 245 218 341 1.20e-49 172
Msa0853090 MtrunA17_Chr7g0228481 56.693 127 52 2 119 245 218 341 9.14e-44 156
Msa0853090 MtrunA17_Chr3g0104491 41.423 239 77 8 171 352 17 249 7.02e-41 145
Msa0853090 MtrunA17_Chr7g0238631 62.136 103 39 0 119 221 111 213 1.41e-40 150
Msa0853090 MtrunA17_Chr7g0233061 51.880 133 57 2 120 252 179 304 1.99e-38 140
Msa0853090 MtrunA17_Chr1g0177901 46.309 149 71 3 132 279 5 145 2.87e-38 135
Msa0853090 MtrunA17_Chr3g0139671 57.282 103 44 0 119 221 83 185 3.09e-38 145
Msa0853090 MtrunA17_Chr7g0228401 47.794 136 46 2 120 230 254 389 4.67e-38 142
Msa0853090 MtrunA17_Chr1g0157731 56.311 103 45 0 119 221 89 191 2.36e-37 142
Msa0853090 MtrunA17_Chr5g0397841 57.732 97 41 0 119 215 108 204 7.99e-35 133
Msa0853090 MtrunA17_Chr5g0397841 36.697 109 64 3 111 214 44 152 1.08e-11 65.9
Msa0853090 MtrunA17_Chr4g0008551 53.398 103 48 0 120 222 37 139 1.93e-34 129
Msa0853090 MtrunA17_Chr3g0133601 50.980 102 50 0 120 221 36 137 7.98e-33 122
Msa0853090 MtrunA17_Chr4g0053431 50.962 104 51 0 120 223 4 107 8.72e-33 123
Msa0853090 MtrunA17_Chr2g0323351 35.124 242 120 9 119 331 12 245 2.10e-32 121
Msa0853090 MtrunA17_Chr4g0042501 44.853 136 72 1 102 234 86 221 3.61e-31 122
Msa0853090 MtrunA17_Chr5g0401731 48.077 104 54 0 120 223 14 117 4.36e-31 120
Msa0853090 MtrunA17_Chr5g0417621 44.118 136 71 1 102 232 115 250 7.67e-30 118
Msa0853090 MtrunA17_Chr4g0022901 49.515 103 49 2 121 221 15 116 1.04e-29 115
Msa0853090 MtrunA17_Chr6g0480581 34.762 210 115 6 118 313 1 202 5.61e-29 112
Msa0853090 MtrunA17_Chr8g0342541 49.515 103 49 2 121 221 14 115 7.37e-29 114
Msa0853090 MtrunA17_Chr6g0454921 44.231 104 58 0 120 223 14 117 8.06e-29 110
Msa0853090 MtrunA17_Chr6g0452271 32.967 182 110 3 121 301 14 184 8.41e-29 114
Msa0853090 MtrunA17_Chr3g0125801 38.418 177 95 2 111 279 6 176 1.01e-28 112
Msa0853090 MtrunA17_Chr2g0309911 38.961 154 79 4 121 260 13 165 1.34e-28 113
Msa0853090 MtrunA17_Chr8g0385321 46.226 106 55 2 121 224 14 119 1.63e-28 112
Msa0853090 MtrunA17_Chr5g0437321 47.959 98 51 0 120 217 18 115 1.91e-28 112
Msa0853090 MtrunA17_Chr8g0342521 50.485 103 48 2 121 221 14 115 1.95e-28 113
Msa0853090 MtrunA17_Chr5g0434571 45.255 137 60 4 89 221 26 151 2.63e-28 113
Msa0853090 MtrunA17_Chr2g0281071 43.966 116 64 1 107 221 1 116 3.20e-28 112
Msa0853090 MtrunA17_Chr1g0193801 46.154 104 55 1 119 221 12 115 3.24e-28 113
Msa0853090 MtrunA17_Chr5g0397231 48.454 97 49 1 121 216 14 110 3.55e-28 112
Msa0853090 MtrunA17_Chr4g0022911 46.602 103 52 2 121 221 15 116 4.23e-28 111
Msa0853090 MtrunA17_Chr5g0410961 45.098 102 55 1 121 221 14 115 4.84e-28 112
Msa0853090 MtrunA17_Chr8g0342481 49.038 104 49 3 121 221 14 116 5.64e-28 112
Msa0853090 MtrunA17_Chr4g0022931 47.573 103 51 2 121 221 15 116 6.52e-28 110
Msa0853090 MtrunA17_Chr4g0048511 44.444 117 62 2 107 221 1 116 7.21e-28 112
Msa0853090 MtrunA17_Chr5g0435101 47.573 103 51 2 121 221 13 114 7.80e-28 108
Msa0853090 MtrunA17_Chr3g0099131 51.887 106 47 3 119 221 41 145 1.07e-27 113
Msa0853090 MtrunA17_Chr1g0193371 45.714 105 54 2 119 221 12 115 1.17e-27 111
Msa0853090 MtrunA17_Chr2g0330041 46.602 103 52 2 121 221 14 115 1.27e-27 112
Msa0853090 MtrunA17_Chr4g0039971 45.763 118 60 3 106 221 1 116 1.31e-27 111
Msa0853090 MtrunA17_Chr6g0460661 47.525 101 53 0 121 221 16 116 1.57e-27 106
Msa0853090 MtrunA17_Chr4g0057031 48.544 103 50 2 121 221 14 115 1.62e-27 108
Msa0853090 MtrunA17_Chr3g0117091 45.714 105 54 2 119 221 12 115 1.63e-27 110
Msa0853090 MtrunA17_Chr2g0328771 41.935 124 69 2 119 240 20 142 1.71e-27 110
Msa0853090 MtrunA17_Chr8g0349261 47.748 111 56 1 107 215 1 111 1.98e-27 109
Msa0853090 MtrunA17_Chr3g0110351 50.476 105 49 2 119 221 12 115 2.09e-27 109
Msa0853090 MtrunA17_Chr4g0030881 43.333 120 60 2 115 226 3 122 2.31e-27 108
Msa0853090 MtrunA17_Chr4g0055981 46.602 103 54 1 115 216 51 153 2.74e-27 107
Msa0853090 MtrunA17_Chr3g0080861 49.057 106 50 3 118 220 36 140 2.84e-27 112
Msa0853090 MtrunA17_Chr1g0211161 45.714 105 54 2 119 221 13 116 2.93e-27 107
Msa0853090 MtrunA17_Chr7g0271241 49.495 99 47 2 119 215 12 109 4.00e-27 110
Msa0853090 MtrunA17_Chr4g0058631 37.162 148 78 4 119 263 12 147 4.74e-27 109
Msa0853090 MtrunA17_Chr4g0042671 41.538 130 70 2 119 242 12 141 4.78e-27 110
Msa0853090 MtrunA17_Chr3g0115821 47.619 105 52 2 119 221 12 115 4.81e-27 109
Msa0853090 MtrunA17_Chr4g0032401 37.908 153 91 3 112 260 10 162 4.89e-27 109
Msa0853090 MtrunA17_Chr7g0254261 41.463 164 82 2 116 265 84 247 5.01e-27 109
Msa0853090 MtrunA17_Chr4g0044421 37.584 149 89 2 121 268 14 159 6.04e-27 105
Msa0853090 MtrunA17_Chr3g0088461 41.880 117 67 1 106 221 9 125 6.39e-27 108
Msa0853090 MtrunA17_Chr3g0103281 45.763 118 62 2 107 223 1 117 6.72e-27 108
Msa0853090 MtrunA17_Chr8g0387421 46.392 97 51 1 121 216 14 110 6.96e-27 108
Msa0853090 MtrunA17_Chr7g0270891 44.231 104 57 1 119 221 12 115 7.71e-27 109
Msa0853090 MtrunA17_Chr6g0460671 42.400 125 66 1 97 221 81 199 9.16e-27 108
Msa0853090 MtrunA17_Chr8g0354661 47.170 106 53 2 118 221 36 140 9.47e-27 110
Msa0853090 MtrunA17_Chr4g0037141 36.145 166 87 5 121 272 14 174 1.07e-26 107
Msa0853090 MtrunA17_Chr1g0168661 51.000 100 46 2 117 214 19 117 1.40e-26 106
Msa0853090 MtrunA17_Chr3g0131121 37.500 152 76 4 121 264 14 154 1.48e-26 107
Msa0853090 MtrunA17_Chr1g0186061 43.548 124 62 3 121 242 22 139 1.53e-26 106
Msa0853090 MtrunA17_Chr7g0217741 49.000 100 48 2 119 216 12 110 4.62e-26 105
Msa0853090 MtrunA17_Chr5g0395281 44.762 105 55 2 119 221 12 115 7.26e-26 105
Msa0853090 MtrunA17_Chr1g0167661 39.665 179 93 6 119 290 12 182 8.33e-26 103
Msa0853090 MtrunA17_Chr2g0327821 44.643 112 59 2 117 226 4 114 8.60e-26 103
Msa0853090 MtrunA17_Chr4g0070611 37.423 163 87 4 117 265 10 171 1.00e-25 105
Msa0853090 MtrunA17_Chr4g0022891 39.844 128 73 3 121 246 14 139 1.79e-25 102
Msa0853090 MtrunA17_Chr2g0323411 45.192 104 56 1 119 221 12 115 2.86e-25 104
Msa0853090 MtrunA17_Chr7g0228891 46.667 105 53 2 119 221 12 115 2.91e-25 103
Msa0853090 MtrunA17_Chr8g0346561 46.465 99 52 1 119 216 12 110 3.90e-25 103
Msa0853090 MtrunA17_Chr1g0154031 45.714 105 54 2 119 221 76 179 4.33e-25 105
Msa0853090 MtrunA17_Chr7g0261281 44.800 125 63 4 119 238 12 135 6.69e-25 102
Msa0853090 MtrunA17_Chr1g0192411 47.115 104 54 1 119 221 12 115 7.55e-25 104
Msa0853090 MtrunA17_Chr5g0417821 44.860 107 58 1 119 224 7 113 1.09e-24 101
Msa0853090 MtrunA17_Chr1g0209661 42.308 104 59 1 119 221 27 130 1.31e-24 102
Msa0853090 MtrunA17_Chr1g0203411 48.454 97 47 2 121 215 14 109 1.52e-24 101
Msa0853090 MtrunA17_Chr4g0068061 46.667 105 53 2 119 221 12 115 2.70e-24 101
Msa0853090 MtrunA17_Chr7g0228231 41.525 118 66 2 121 237 16 131 2.82e-24 98.6
Msa0853090 MtrunA17_Chr1g0167691 32.083 240 145 8 119 347 12 244 3.21e-24 99.8
Msa0853090 MtrunA17_Chr4g0070641 45.098 102 55 1 115 215 8 109 3.23e-24 97.4
Msa0853090 MtrunA17_Chr7g0275911 44.444 99 54 1 119 216 12 110 4.77e-24 99.4
Msa0853090 MtrunA17_Chr1g0180391 46.939 98 49 2 119 214 19 115 4.91e-24 98.6
Msa0853090 MtrunA17_Chr7g0240821 42.609 115 62 3 124 235 6 119 5.83e-24 98.6
Msa0853090 MtrunA17_Chr8g0334881 44.545 110 59 2 113 220 4 113 6.23e-24 100
Msa0853090 MtrunA17_Chr4g0013361 40.152 132 76 3 121 250 12 142 6.73e-24 99.8
Msa0853090 MtrunA17_Chr7g0233151 58.667 75 29 1 171 245 1 73 7.57e-24 96.7
Msa0853090 MtrunA17_Chr8g0343831 47.423 97 50 1 121 216 10 106 1.33e-23 98.2
Msa0853090 MtrunA17_Chr1g0152011 40.833 120 67 3 121 236 14 133 1.35e-23 99.8
Msa0853090 MtrunA17_Chr6g0450101 43.478 115 61 3 121 233 16 128 1.43e-23 97.1
Msa0853090 MtrunA17_Chr6g0453471 44.231 104 57 1 119 221 12 115 1.45e-23 100
Msa0853090 MtrunA17_Chr1g0194301 34.375 160 100 3 113 270 27 183 1.81e-23 98.2
Msa0853090 MtrunA17_Chr4g0054391 37.405 131 79 3 107 235 1 130 1.87e-23 98.6
Msa0853090 MtrunA17_Chr2g0327351 45.918 98 51 2 121 216 14 111 2.79e-23 98.6
Msa0853090 MtrunA17_Chr5g0400821 41.593 113 64 2 121 231 14 126 3.09e-23 98.2
Msa0853090 MtrunA17_Chr5g0434931 38.938 113 68 1 114 225 30 142 3.42e-23 97.4
Msa0853090 MtrunA17_Chr2g0322521 51.852 108 48 3 119 223 29 135 3.46e-23 99.4
Msa0853090 MtrunA17_Chr1g0187761 40.559 143 73 4 119 259 12 144 3.94e-23 97.1
Msa0853090 MtrunA17_Chr7g0274581 44.792 96 52 1 121 215 14 109 6.12e-23 95.1
Msa0853090 MtrunA17_Chr5g0441141 45.631 103 52 3 121 220 14 115 6.28e-23 96.7
Msa0853090 MtrunA17_Chr5g0440781 45.631 103 52 3 121 220 14 115 6.30e-23 94.7
Msa0853090 MtrunA17_Chr5g0440761 45.631 103 52 3 121 220 14 115 8.13e-23 96.3
Msa0853090 MtrunA17_Chr3g0121241 43.434 99 55 1 119 216 42 140 9.73e-23 96.7
Msa0853090 MtrunA17_Chr4g0028311 32.240 183 109 6 107 282 1 175 1.26e-22 96.7
Msa0853090 MtrunA17_Chr7g0228991 43.299 97 54 1 121 216 31 127 1.35e-22 95.9
Msa0853090 MtrunA17_Chr4g0022881 41.837 98 54 2 121 216 14 110 1.43e-22 94.7
Msa0853090 MtrunA17_Chr4g0060721 39.496 119 71 1 121 238 15 133 1.48e-22 96.7
Msa0853090 MtrunA17_Chr2g0311221 41.818 110 62 2 108 216 4 112 1.80e-22 96.3
Msa0853090 MtrunA17_Chr5g0441131 43.137 102 56 2 121 220 11 112 2.59e-22 92.8
Msa0853090 MtrunA17_Chr5g0434911 40.566 106 62 1 121 225 23 128 2.93e-22 94.7
Msa0853090 MtrunA17_Chr3g0135311 42.478 113 62 3 121 231 14 125 3.10e-22 96.3
Msa0853090 MtrunA17_Chr7g0220341 38.889 126 63 3 95 216 10 125 5.63e-22 94.0
Msa0853090 MtrunA17_Chr7g0247131 52.564 78 35 1 146 221 4 81 5.89e-22 94.0
Msa0853090 MtrunA17_Chr1g0151941 39.252 107 63 2 117 221 10 116 6.70e-22 93.2
Msa0853090 MtrunA17_Chr7g0217221 44.000 100 55 1 117 215 10 109 9.86e-22 93.2
Msa0853090 MtrunA17_Chr6g0470971 38.889 108 65 1 121 227 16 123 1.03e-21 93.6
Msa0853090 MtrunA17_Chr1g0203441 39.048 105 63 1 121 224 15 119 1.24e-21 93.2
Msa0853090 MtrunA17_Chr4g0046181 64.407 59 21 0 119 177 219 277 1.36e-21 93.2
Msa0853090 MtrunA17_Chr7g0264641 42.718 103 57 2 121 221 14 116 1.39e-21 92.8
Msa0853090 MtrunA17_Chr6g0453211 43.000 100 56 1 117 215 10 109 2.43e-21 93.2
Msa0853090 MtrunA17_Chr3g0092401 39.823 113 67 1 121 232 15 127 2.99e-21 92.8
Msa0853090 MtrunA17_Chr1g0194951 45.714 105 54 2 119 221 12 115 4.84e-21 93.2
Msa0853090 MtrunA17_Chr5g0434841 37.815 119 71 2 106 221 5 123 5.80e-21 92.0
Msa0853090 MtrunA17_Chr4g0072751 39.655 116 68 2 121 234 14 129 7.13e-21 92.4
Msa0853090 MtrunA17_Chr5g0434831 39.450 109 65 1 114 221 2 110 9.28e-21 88.6
Msa0853090 MtrunA17_Chr1g0194291 31.875 160 108 1 111 269 13 172 1.19e-20 90.1
Msa0853090 MtrunA17_Chr2g0293911 39.669 121 69 2 119 238 24 141 2.29e-20 90.5
Msa0853090 MtrunA17_Chr5g0416341 41.837 98 57 0 124 221 29 126 2.94e-20 91.7
Msa0853090 MtrunA17_Chr4g0068921 38.333 120 72 2 96 214 2 120 3.44e-20 87.0
Msa0853090 MtrunA17_Chr5g0421201 55.128 78 25 2 173 250 12 79 4.35e-20 86.7
Msa0853090 MtrunA17_Chr6g0487491 28.780 205 106 7 107 297 1 179 5.45e-20 88.2
Msa0853090 MtrunA17_Chr8g0360111 42.105 95 54 1 121 214 27 121 6.28e-20 88.2
Msa0853090 MtrunA17_Chr7g0254411 39.216 102 61 1 121 221 14 115 1.34e-19 88.6
Msa0853090 MtrunA17_Chr3g0099141 47.059 85 44 1 119 202 40 124 1.55e-19 84.0
Msa0853090 MtrunA17_Chr7g0233161 67.925 53 17 0 120 172 298 350 1.95e-19 88.2
Msa0853090 MtrunA17_Chr7g0238651 32.571 175 103 5 121 287 7 174 4.63e-19 87.0
Msa0853090 MtrunA17_Chr8g0362231 38.776 98 60 0 124 221 25 122 8.48e-19 87.0
Msa0853090 MtrunA17_Chr2g0323321 46.341 82 41 2 119 198 11 91 1.50e-18 80.5
Msa0853090 MtrunA17_Chr7g0269831 48.571 105 51 2 119 221 12 115 1.67e-18 85.5
Msa0853090 MtrunA17_Chr8g0342461 48.718 78 36 3 121 195 14 90 4.91e-18 79.7
Msa0853090 MtrunA17_Chr4g0042611 46.753 77 40 1 119 194 12 88 6.02e-18 77.8
Msa0853090 MtrunA17_Chr8g0342471 47.436 78 37 3 121 195 14 90 1.87e-17 78.2
Msa0853090 MtrunA17_Chr8g0342531 46.753 77 38 2 121 195 14 89 7.44e-17 77.4
Msa0853090 MtrunA17_Chr8g0342511 45.333 75 38 2 121 193 14 87 7.03e-16 72.4
Msa0853090 MtrunA17_Chr5g0395221 40.260 77 45 1 119 194 12 88 1.83e-15 70.9
Msa0853090 MtrunA17_Chr5g0434901 45.455 66 36 0 154 219 9 74 2.04e-15 72.0
Msa0853090 MtrunA17_Chr3g0093811 42.254 71 41 0 154 224 18 88 6.65e-15 73.9
Msa0853090 MtrunA17_Chr6g0483051 35.593 118 75 1 121 238 120 236 2.16e-14 74.3
Msa0853090 MtrunA17_Chr6g0483051 36.458 96 60 1 119 214 67 161 5.04e-13 70.1
Msa0853090 MtrunA17_Chr7g0229101 43.939 66 37 0 154 219 8 73 4.18e-14 70.5
Msa0853090 MtrunA17_Chr2g0294811 42.353 85 48 1 119 202 12 96 6.04e-14 67.8
Msa0853090 MtrunA17_Chr5g0425591 43.902 82 42 3 121 199 11 91 6.32e-14 67.0
Msa0853090 MtrunA17_Chr6g0453751 41.053 95 46 4 115 199 16 110 2.43e-13 66.6
Msa0853090 MtrunA17_Chr7g0229131 40.299 67 40 0 154 220 8 74 2.61e-12 64.7
Msa0853090 MtrunA17_Chr7g0274481 40.000 90 52 2 118 206 3 91 8.35e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0853090 AT5G58850.1 47.232 271 114 6 111 352 95 365 2.38e-67 218
Msa0853090 AT5G11050.1 46.570 277 108 7 110 352 94 364 3.02e-65 213
Msa0853090 AT4G18770.1 45.415 229 101 6 42 263 141 352 1.10e-59 198
Msa0853090 AT3G27785.1 63.448 145 48 2 109 252 177 317 6.02e-57 191
Msa0853090 AT5G40360.1 52.817 142 62 1 111 252 148 284 4.58e-48 166
Msa0853090 AT3G09370.1 61.538 104 40 0 119 222 128 231 4.49e-41 150
Msa0853090 AT3G09370.2 61.538 104 40 0 119 222 133 236 4.58e-41 150
Msa0853090 AT3G09370.3 61.538 104 40 0 119 222 141 244 5.28e-41 150
Msa0853090 AT5G02320.1 61.165 103 40 0 119 221 125 227 1.95e-40 149
Msa0853090 AT5G02320.2 61.165 103 40 0 119 221 125 227 1.95e-40 149
Msa0853090 AT5G02320.3 61.165 103 40 0 119 221 65 167 2.37e-40 148
Msa0853090 AT2G25230.1 50.000 134 56 2 121 252 26 150 7.58e-37 133
Msa0853090 AT5G11510.5 53.398 103 48 0 119 221 79 181 1.25e-36 140
Msa0853090 AT5G11510.3 53.398 103 48 0 119 221 79 181 1.30e-36 141
Msa0853090 AT5G11510.1 53.398 103 48 0 119 221 79 181 1.30e-36 141
Msa0853090 AT5G11510.4 53.398 103 48 0 119 221 79 181 1.30e-36 141
Msa0853090 AT5G11510.2 53.398 103 48 0 119 221 79 181 1.34e-36 140
Msa0853090 AT4G32730.5 53.398 103 48 0 119 221 85 187 1.01e-35 138
Msa0853090 AT4G32730.4 53.398 103 48 0 119 221 85 187 1.01e-35 138
Msa0853090 AT4G32730.3 53.398 103 48 0 119 221 85 187 1.01e-35 138
Msa0853090 AT4G32730.2 53.398 103 48 0 119 221 85 187 1.01e-35 138
Msa0853090 AT4G32730.1 53.398 103 48 0 119 221 85 187 1.34e-35 137
Msa0853090 AT5G40430.1 45.522 134 65 2 119 252 52 177 1.32e-33 125
Msa0853090 AT4G00540.2 48.630 146 71 3 119 260 101 246 6.04e-33 127
Msa0853090 AT4G00540.1 48.630 146 71 3 119 260 99 244 1.02e-32 127
Msa0853090 AT3G55730.1 51.961 102 49 0 120 221 55 156 1.68e-31 123
Msa0853090 AT3G09230.1 51.961 102 49 0 120 221 54 155 2.13e-30 119
Msa0853090 AT3G50060.1 46.154 104 56 0 120 223 5 108 2.46e-30 117
Msa0853090 AT3G11440.2 50.926 108 51 2 118 223 40 147 4.12e-30 120
Msa0853090 AT1G69560.2 35.912 181 107 2 94 269 96 272 5.39e-30 117
Msa0853090 AT3G29020.1 49.123 114 55 1 113 223 57 170 5.51e-30 115
Msa0853090 AT1G69560.1 35.912 181 107 2 94 269 80 256 5.79e-30 117
Msa0853090 AT1G17950.1 41.781 146 81 2 121 262 5 150 6.21e-30 115
Msa0853090 AT3G11440.3 50.926 108 51 2 118 223 40 147 1.07e-29 119
Msa0853090 AT3G11440.4 50.926 108 51 2 118 223 40 147 1.07e-29 119
Msa0853090 AT3G11440.1 50.926 108 51 2 118 223 40 147 1.07e-29 119
Msa0853090 AT4G37260.1 47.115 104 55 0 120 223 12 115 1.57e-29 116
Msa0853090 AT5G67300.1 48.039 102 53 0 120 221 5 106 1.62e-29 115
Msa0853090 AT3G29020.2 49.123 114 55 1 113 223 59 172 2.32e-29 115
Msa0853090 AT2G23290.1 46.018 113 59 1 111 223 5 115 3.82e-29 114
Msa0853090 AT4G26930.1 46.154 104 55 1 118 220 18 121 7.84e-29 115
Msa0853090 AT3G28470.1 47.748 111 56 2 107 216 1 110 9.83e-29 114
Msa0853090 AT2G32460.1 45.385 130 62 4 97 223 1 124 1.45e-28 116
Msa0853090 AT2G39880.1 49.020 102 52 0 120 221 49 150 2.02e-28 114
Msa0853090 AT2G32460.2 50.000 108 50 3 119 223 6 112 2.58e-28 115
Msa0853090 AT4G01680.1 39.286 140 74 2 119 257 12 141 3.04e-28 112
Msa0853090 AT1G26780.1 48.760 121 57 2 118 233 95 215 3.11e-28 111
Msa0853090 AT5G06100.1 49.074 108 53 2 118 223 31 138 4.18e-28 114
Msa0853090 AT5G26660.1 44.954 109 57 2 119 225 12 119 4.21e-28 112
Msa0853090 AT3G23250.1 36.364 187 93 5 119 297 12 180 4.53e-28 111
Msa0853090 AT1G26780.2 48.760 121 57 2 118 233 95 215 5.04e-28 112
Msa0853090 AT4G01680.3 39.286 140 74 2 119 257 12 141 6.04e-28 109
Msa0853090 AT1G09540.1 39.655 174 89 6 119 288 12 173 6.79e-28 112
Msa0853090 AT3G12720.1 45.631 103 53 2 121 221 24 125 8.86e-28 110
Msa0853090 AT1G63910.1 49.485 97 48 1 121 216 14 110 9.07e-28 112
Msa0853090 AT5G14750.1 34.054 185 110 3 121 297 18 198 9.82e-28 108
Msa0853090 AT5G06100.5 49.074 108 53 2 118 223 31 138 9.93e-28 114
Msa0853090 AT5G06100.2 49.074 108 53 2 118 223 31 138 9.93e-28 114
Msa0853090 AT5G06100.3 49.074 108 53 2 118 223 31 138 9.93e-28 114
Msa0853090 AT5G06100.4 49.074 108 53 2 118 223 31 138 9.93e-28 114
Msa0853090 AT1G74080.1 50.980 102 49 1 116 216 9 110 1.09e-27 111
Msa0853090 AT1G57560.2 46.667 105 53 2 119 221 12 115 1.38e-27 109
Msa0853090 AT1G57560.1 46.667 105 53 2 119 221 12 115 1.58e-27 110
Msa0853090 AT1G18570.1 38.710 155 78 3 119 272 13 151 1.80e-27 111
Msa0853090 AT1G66230.1 52.000 100 45 2 119 216 12 110 2.26e-27 109
Msa0853090 AT4G28110.1 46.667 105 55 1 121 224 14 118 2.48e-27 109
Msa0853090 AT3G13890.2 44.118 102 56 1 121 221 14 115 2.72e-27 110
Msa0853090 AT5G07700.1 47.170 106 55 1 117 221 10 115 3.16e-27 110
Msa0853090 AT5G07700.2 47.170 106 55 1 117 221 10 115 3.16e-27 110
Msa0853090 AT1G74430.1 31.174 247 137 7 119 346 12 244 3.55e-27 108
Msa0853090 AT5G07690.1 49.505 101 50 1 117 216 10 110 4.40e-27 109
Msa0853090 AT4G13480.1 45.865 133 62 4 115 245 2 126 4.61e-27 108
Msa0853090 AT5G16770.4 46.154 104 55 1 119 221 12 115 5.54e-27 109
Msa0853090 AT5G16770.3 46.154 104 55 1 119 221 12 115 5.54e-27 109
Msa0853090 AT4G01680.2 37.500 152 72 3 119 257 12 153 5.60e-27 109
Msa0853090 AT4G33450.1 49.524 105 50 1 121 222 19 123 6.02e-27 107
Msa0853090 AT5G16770.1 46.154 104 55 1 119 221 12 115 8.73e-27 108
Msa0853090 AT5G16770.2 46.154 104 55 1 119 221 12 115 8.73e-27 108
Msa0853090 AT5G61420.2 46.226 106 56 1 117 221 10 115 8.85e-27 109
Msa0853090 AT1G68320.1 33.019 212 122 7 117 311 17 225 8.93e-27 107
Msa0853090 AT4G05100.1 43.966 116 64 1 107 221 1 116 9.11e-27 108
Msa0853090 AT5G55020.1 44.231 104 57 1 118 220 25 128 1.03e-26 111
Msa0853090 AT4G38620.1 45.631 103 53 2 121 221 14 115 1.05e-26 107
Msa0853090 AT4G12350.1 48.544 103 50 2 121 221 14 115 1.13e-26 107
Msa0853090 AT5G17800.1 44.828 116 62 1 116 229 88 203 1.38e-26 108
Msa0853090 AT3G61250.1 51.515 99 45 2 119 215 12 109 1.61e-26 107
Msa0853090 AT1G35515.1 45.098 102 55 1 121 221 14 115 1.62e-26 105
Msa0853090 AT3G13890.1 41.441 111 55 2 121 221 14 124 1.92e-26 108
Msa0853090 AT4G21440.1 45.192 104 56 1 119 221 12 115 1.98e-26 108
Msa0853090 AT5G10280.1 45.714 105 54 2 119 221 12 115 2.74e-26 107
Msa0853090 AT2G26960.1 47.573 103 53 1 119 220 20 122 3.10e-26 108
Msa0853090 AT4G22680.1 47.573 103 51 2 121 221 14 115 3.29e-26 105
Msa0853090 AT5G59780.3 43.966 116 62 2 113 226 2 116 3.33e-26 105
Msa0853090 AT5G65230.1 47.619 105 52 2 119 221 12 115 3.87e-26 106
Msa0853090 AT3G24310.1 45.833 120 57 3 121 238 20 133 3.99e-26 105
Msa0853090 AT5G56110.1 46.610 118 61 2 107 223 1 117 4.37e-26 106
Msa0853090 AT3G13540.1 30.705 241 133 8 109 320 13 248 4.38e-26 105
Msa0853090 AT3G08500.1 46.154 104 55 1 119 221 30 133 4.68e-26 107
Msa0853090 AT3G02940.2 45.192 104 56 1 119 221 12 115 4.84e-26 106
Msa0853090 AT3G46130.1 46.296 108 55 2 121 226 11 117 5.82e-26 105
Msa0853090 AT1G73410.1 51.402 107 49 1 121 224 6 112 5.92e-26 104
Msa0853090 AT3G02940.1 45.192 104 56 1 119 221 12 115 8.06e-26 105
Msa0853090 AT3G02940.3 45.192 104 56 1 119 221 12 115 8.06e-26 105
Msa0853090 AT1G73410.2 51.402 107 49 1 121 224 6 112 9.04e-26 103
Msa0853090 AT5G12870.1 44.118 102 56 1 121 221 20 121 9.13e-26 105
Msa0853090 AT1G22640.1 43.689 103 55 2 121 221 14 115 1.52e-25 103
Msa0853090 AT5G60890.1 46.226 106 56 1 117 221 10 115 1.71e-25 104
Msa0853090 AT5G35550.1 29.876 241 149 6 109 334 4 239 1.77e-25 103
Msa0853090 AT4G09460.1 42.718 103 56 2 121 221 14 115 2.33e-25 102
Msa0853090 AT5G16600.1 49.524 105 50 2 119 221 12 115 2.53e-25 104
Msa0853090 AT3G01530.1 44.643 112 59 2 111 220 17 127 3.23e-25 101
Msa0853090 AT2G26950.1 44.037 109 52 2 117 220 14 118 3.49e-25 105
Msa0853090 AT5G15310.1 45.192 104 56 1 119 221 12 115 4.73e-25 103
Msa0853090 AT5G15310.2 45.192 104 56 1 119 221 12 115 5.29e-25 103
Msa0853090 AT5G15310.4 47.475 99 51 1 119 216 12 110 5.39e-25 102
Msa0853090 AT3G01140.2 47.959 98 50 1 119 215 12 109 5.99e-25 103
Msa0853090 AT5G54230.1 43.810 105 58 1 121 224 14 118 7.87e-25 103
Msa0853090 AT3G01140.1 47.959 98 50 1 119 215 55 152 8.35e-25 104
Msa0853090 AT4G34990.1 43.396 106 59 1 121 225 14 119 8.65e-25 102
Msa0853090 AT5G40330.1 41.284 109 63 1 109 216 2 110 8.71e-25 100
Msa0853090 AT3G27810.1 43.548 124 67 2 121 243 22 143 9.11e-25 100
Msa0853090 AT5G52600.1 41.525 118 67 2 112 227 5 122 1.04e-24 100
Msa0853090 AT5G40350.1 34.848 198 113 7 121 313 19 205 1.24e-24 100
Msa0853090 AT4G17785.2 42.735 117 64 2 107 221 1 116 1.38e-24 103
Msa0853090 AT4G17785.1 42.735 117 64 2 107 221 1 116 1.38e-24 103
Msa0853090 AT3G53200.1 43.925 107 57 2 117 221 7 112 1.66e-24 100
Msa0853090 AT1G06180.1 45.299 117 59 3 119 231 12 127 1.91e-24 100
Msa0853090 AT5G62320.1 44.737 114 55 3 119 224 13 126 2.09e-24 100
Msa0853090 AT1G34670.1 44.231 104 57 1 119 221 12 115 3.19e-24 102
Msa0853090 AT2G47190.1 41.463 123 70 2 111 232 13 134 3.36e-24 100
Msa0853090 AT2G31180.1 32.105 190 121 3 121 308 14 197 4.01e-24 99.8
Msa0853090 AT5G57620.1 42.241 116 65 2 121 234 14 129 4.04e-24 101
Msa0853090 AT1G16490.1 43.333 120 64 3 121 237 16 134 4.41e-24 100
Msa0853090 AT2G16720.1 41.748 103 57 2 121 221 14 115 5.06e-24 100
Msa0853090 AT5G39700.1 39.837 123 73 1 99 220 33 155 7.27e-24 97.4
Msa0853090 AT3G27920.1 45.361 97 52 1 121 216 16 112 9.64e-24 98.2
Msa0853090 AT5G23000.1 42.735 117 64 3 107 221 1 116 1.15e-23 100
Msa0853090 AT3G48920.1 44.554 101 55 1 121 220 20 120 2.44e-23 97.8
Msa0853090 AT4G25560.1 41.593 113 65 1 110 221 1 113 3.06e-23 98.2
Msa0853090 AT5G62470.1 41.379 116 67 1 121 236 14 128 3.69e-23 99.0
Msa0853090 AT1G18710.1 42.453 106 60 1 121 225 14 119 4.06e-23 97.4
Msa0853090 AT3G60460.1 45.283 106 56 2 117 220 9 114 6.39e-23 97.4
Msa0853090 AT3G30210.1 28.507 221 142 7 121 339 29 235 8.06e-23 96.7
Msa0853090 AT1G48000.1 41.176 119 66 2 121 238 34 149 9.64e-23 95.9
Msa0853090 AT5G14340.1 43.810 105 56 2 119 221 24 127 1.28e-22 96.3
Msa0853090 AT1G56160.1 41.748 103 57 2 121 221 16 117 1.59e-22 96.3
Msa0853090 AT3G49690.1 44.545 110 57 3 121 226 14 123 1.63e-22 96.7
Msa0853090 AT3G62610.1 44.118 102 56 1 121 221 14 115 2.56e-22 96.7
Msa0853090 AT1G79180.1 31.429 175 102 4 121 285 16 182 3.78e-22 95.5
Msa0853090 AT5G49330.1 44.231 104 57 1 119 221 12 115 5.95e-22 95.5
Msa0853090 AT1G25340.1 43.689 103 55 2 121 221 20 121 1.04e-21 94.0
Msa0853090 AT1G74650.1 42.241 116 65 2 107 221 1 115 1.20e-21 94.7
Msa0853090 AT5G65790.1 44.545 110 57 3 121 226 14 123 1.44e-21 95.1
Msa0853090 AT5G62470.2 41.026 117 67 2 121 236 14 129 1.49e-21 94.7
Msa0853090 AT5G26660.2 48.611 72 37 0 154 225 17 88 3.23e-21 93.2
Msa0853090 AT3G47600.1 42.157 102 58 1 121 221 14 115 3.86e-21 93.2
Msa0853090 AT1G25340.2 41.584 101 55 1 121 221 20 116 4.50e-21 92.0
Msa0853090 AT4G37780.1 37.273 110 67 2 121 228 14 123 6.91e-21 92.0
Msa0853090 AT1G66370.1 37.931 116 71 1 114 228 3 118 6.92e-21 90.9
Msa0853090 AT5G49620.1 42.453 106 60 1 110 214 17 122 7.93e-21 92.0
Msa0853090 AT2G47460.1 42.157 102 58 1 121 221 14 115 9.10e-21 92.8
Msa0853090 AT1G25340.3 41.584 101 55 1 121 221 20 116 9.51e-21 91.7
Msa0853090 AT5G14750.3 31.788 151 92 2 154 297 18 164 1.60e-20 87.8
Msa0853090 AT5G52260.1 34.868 152 71 3 121 270 14 139 2.19e-20 89.7
Msa0853090 AT3G28910.1 45.833 96 51 1 121 215 14 109 2.34e-20 90.9
Msa0853090 AT1G66380.1 44.118 102 56 1 115 215 4 105 4.36e-20 85.9
Msa0853090 AT1G14350.2 38.938 113 68 1 124 235 28 140 8.30e-20 90.5
Msa0853090 AT1G14350.1 38.938 113 68 1 124 235 28 140 8.30e-20 90.5
Msa0853090 AT3G06490.1 42.857 98 53 2 119 214 19 115 9.74e-20 89.0
Msa0853090 AT3G12820.1 39.252 107 62 2 121 225 16 121 1.12e-19 87.4
Msa0853090 AT1G56650.1 36.735 147 78 3 115 246 4 150 1.13e-19 87.4
Msa0853090 AT5G35550.2 47.368 76 40 0 154 229 53 128 1.71e-19 87.4
Msa0853090 AT2G02820.2 40.741 108 63 1 124 230 33 140 3.58e-19 89.0
Msa0853090 AT2G02820.1 40.741 108 63 1 124 230 33 140 3.71e-19 88.6
Msa0853090 AT1G08810.1 32.203 177 104 6 121 283 14 188 4.10e-19 86.7
Msa0853090 AT5G40350.2 34.756 164 92 6 154 313 8 160 4.97e-19 83.6
Msa0853090 AT2G02820.3 40.816 98 58 0 124 221 33 130 5.50e-19 87.0
Msa0853090 AT1G66390.1 44.118 102 56 1 115 215 4 105 6.32e-19 85.5
Msa0853090 AT2G36890.1 40.777 103 59 2 121 221 14 116 8.74e-19 85.9
Msa0853090 AT1G79180.2 31.126 151 70 2 121 237 16 166 1.03e-18 86.3
Msa0853090 AT3G27810.2 45.556 90 47 1 154 243 7 94 1.06e-18 83.2
Msa0853090 AT2G36890.2 40.777 103 59 2 121 221 55 157 1.94e-18 85.5
Msa0853090 AT2G37630.1 32.335 167 104 4 123 280 6 172 5.45e-18 84.7
Msa0853090 AT5G59780.2 46.575 73 39 0 154 226 23 95 5.49e-18 82.0
Msa0853090 AT3G46130.4 46.575 73 39 0 154 226 23 95 1.82e-17 80.9
Msa0853090 AT5G49620.2 37.500 120 60 2 110 214 17 136 1.83e-17 82.4
Msa0853090 AT3G46130.3 46.575 73 39 0 154 226 13 85 1.85e-17 80.9
Msa0853090 AT3G23250.2 35.252 139 67 3 165 297 2 123 6.39e-17 79.3
Msa0853090 AT3G53200.2 48.529 68 35 0 154 221 12 79 8.23e-17 78.6
Msa0853090 AT3G47600.2 34.483 116 73 1 131 246 22 134 2.06e-16 79.7
Msa0853090 AT3G12820.2 44.444 72 40 0 154 225 2 73 7.16e-16 75.5
Msa0853090 AT3G18100.1 37.113 97 59 2 119 214 493 588 6.26e-15 76.6
Msa0853090 AT3G18100.1 36.170 94 60 0 121 214 546 639 3.60e-14 74.3
Msa0853090 AT3G18100.3 37.113 97 59 2 119 214 445 540 6.58e-15 76.6
Msa0853090 AT3G18100.3 36.170 94 60 0 121 214 498 591 3.59e-14 74.3
Msa0853090 AT3G18100.4 37.113 97 59 2 119 214 332 427 1.17e-14 75.5
Msa0853090 AT3G18100.4 36.170 94 60 0 121 214 385 478 5.87e-14 73.6
Msa0853090 AT5G14750.4 30.714 140 86 3 165 297 2 137 1.46e-14 70.5
Msa0853090 AT5G14750.2 30.714 140 86 3 165 297 2 137 1.46e-14 70.5
Msa0853090 AT3G18100.2 37.113 97 59 2 119 214 280 375 1.61e-14 75.1
Msa0853090 AT3G18100.2 36.170 94 60 0 121 214 333 426 8.23e-14 73.2
Msa0853090 AT1G71030.2 40.000 65 39 0 157 221 5 69 6.95e-14 69.7
Msa0853090 AT1G71030.1 40.000 65 39 0 157 221 19 83 8.38e-14 69.7
Msa0853090 AT1G22640.3 45.614 57 31 0 165 221 2 58 1.26e-13 69.3
Msa0853090 AT1G66380.3 47.619 63 33 0 154 216 11 73 1.10e-12 64.3
Msa0853090 AT1G18960.1 34.615 104 64 3 121 223 10 110 2.03e-11 64.7
Msa0853090 AT1G14350.3 40.000 75 44 1 162 235 23 97 5.48e-11 63.9
Msa0853090 AT1G14350.4 40.000 75 44 1 162 235 23 97 5.48e-11 63.9

Find 72 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCCCAACGGTTTCCAATTT+TGG 0.083397 5_4:+44605900 None:intergenic
AAGCTTGATTCTTGAGTATT+TGG 0.147400 5_4:+44607378 None:intergenic
TCCAAGTGCATGTTGTAATT+TGG 0.158793 5_4:+44605493 None:intergenic
TCATTTGCGTCCTGATATTA+AGG 0.222411 5_4:-44606882 Msa0853090:intron
AGTATGTTCCCTTACTCTTA+TGG 0.253114 5_4:-44607423 Msa0853090:CDS
CTTTCATGGATAGATTCTTA+TGG 0.253266 5_4:-44607488 Msa0853090:CDS
AGCAATATGGCGATAGAAAA+TGG 0.260431 5_4:-44606967 Msa0853090:CDS
GTCAATGGCGTTAAAATCTT+TGG 0.273706 5_4:-44607537 Msa0853090:CDS
GTAGCTACACATGCCAAAAT+TGG 0.303292 5_4:-44605913 Msa0853090:CDS
ATCATTGGAATGCCACTAAA+AGG 0.314844 5_4:-44605831 Msa0853090:CDS
TTTCATGGATAGATTCTTAT+GGG 0.320364 5_4:-44607487 Msa0853090:CDS
CCAAGTGCATGTTGTAATTT+GGG 0.329240 5_4:+44605494 None:intergenic
CTTAAGGATATTCAAGGTTA+TGG 0.350445 5_4:-44607282 Msa0853090:CDS
TAAGGCACAATGTGGAAGTT+TGG 0.351661 5_4:+44607301 None:intergenic
GAATCAAGCTTTGTTGTTGA+TGG 0.356694 5_4:-44607366 Msa0853090:CDS
GCATGTTGTAATTTGGGTAT+TGG 0.376877 5_4:+44605500 None:intergenic
AACTTCCACATTGTGCCTTA+AGG 0.380633 5_4:-44607298 Msa0853090:CDS
ATAAAGTTGGTTAAGCAATA+TGG 0.389260 5_4:-44606980 Msa0853090:CDS
CAAATAGCTGAGAAGTTAGA+AGG 0.389483 5_4:-44606941 Msa0853090:CDS
AAATGTCAATGACCCTTTCA+TGG 0.400644 5_4:-44607502 Msa0853090:CDS
TTGTATGAAGTGTAATTCAT+TGG 0.411392 5_4:+44605594 None:intergenic
TCCATTGAAATCATGGTAAG+AGG 0.422796 5_4:-44607573 None:intergenic
ATATATCTAACCTTAATATC+AGG 0.434454 5_4:+44606872 None:intergenic
TGAGAGAGGTAAAGATCATA+AGG 0.438571 5_4:+44605442 None:intergenic
TTAAAGGAAACTGATAAAGT+TGG 0.449247 5_4:-44606993 Msa0853090:intron
AGCTGAGAAGTTAGAAGGAA+GGG 0.452156 5_4:-44606936 Msa0853090:CDS
GAGATAGCAAAGAAGATTCC+AGG 0.462177 5_4:-44605877 Msa0853090:CDS
ATGGTAAGAGGAGGAAATCA+TGG 0.470343 5_4:-44607561 Msa0853090:CDS
TTGTGCCTTAAGGATATTCA+AGG 0.475669 5_4:-44607288 Msa0853090:CDS
CATAACCTTGAATATCCTTA+AGG 0.482233 5_4:+44607283 None:intergenic
TGGTTGGAACCATAAGAGTA+AGG 0.488644 5_4:+44607414 None:intergenic
GCAATATGGCGATAGAAAAT+GGG 0.492969 5_4:-44606966 Msa0853090:CDS
TGCCAAAATTGGAAACCGTT+GGG 0.495529 5_4:-44605902 Msa0853090:CDS
AAGTGTCGCATGAGAGGAAG+AGG 0.497010 5_4:+44605681 None:intergenic
CCCAAATTACAACATGCACT+TGG 0.498733 5_4:-44605494 Msa0853090:CDS
GTTCCAACCATGAGTTTATG+TGG 0.505567 5_4:-44607401 Msa0853090:CDS
ATGCCAAAATTGGAAACCGT+TGG 0.505828 5_4:-44605903 Msa0853090:CDS
GGAGGAAATCATGGGGTCAA+TGG 0.507214 5_4:-44607552 Msa0853090:CDS
AGAGGTAAAGATCATAAGGA+AGG 0.510605 5_4:+44605446 None:intergenic
AGTTATCCTTCCCACAATGT+TGG 0.513482 5_4:+44607251 None:intergenic
GGTGAAAACACCAACATTGT+GGG 0.515105 5_4:-44607261 Msa0853090:CDS
CATAAGAATCTATCCATGAA+AGG 0.517939 5_4:+44607489 None:intergenic
AGGAAATTATTCATTGAGGT+AGG 0.519926 5_4:+44605466 None:intergenic
ATAAGAATCTATCCATGAAA+GGG 0.524626 5_4:+44607490 None:intergenic
TGGCCACATAAACTCATGGT+TGG 0.526915 5_4:+44607398 None:intergenic
GAAGAATGAAAATAATTCCA+AGG 0.528666 5_4:-44605782 Msa0853090:CDS
TAGCTGAGAAGTTAGAAGGA+AGG 0.540309 5_4:-44606937 Msa0853090:CDS
TGGTGAAAACACCAACATTG+TGG 0.554704 5_4:-44607262 Msa0853090:CDS
GAGAAGTTAGAAGGAAGGGT+TGG 0.557009 5_4:-44606932 Msa0853090:CDS
AGGAAGGAAATTATTCATTG+AGG 0.563206 5_4:+44605462 None:intergenic
TGGTAAGAGGAGGAAATCAT+GGG 0.576546 5_4:-44607560 Msa0853090:CDS
ATGAGAGGAAGAGGGTATGT+TGG 0.586332 5_4:+44605690 None:intergenic
TATTTGGCCACATAAACTCA+TGG 0.590477 5_4:+44607394 None:intergenic
AAGAATGAAAATAATTCCAA+GGG 0.598750 5_4:-44605781 Msa0853090:CDS
ACTTCCGAGGTCTTGATCAA+AGG 0.601817 5_4:-44607219 Msa0853090:CDS
GGTTGGAACCATAAGAGTAA+GGG 0.602635 5_4:+44607415 None:intergenic
AGTGGACAAACGAAGAAGAC+AGG 0.603153 5_4:-44607194 Msa0853090:intron
AAAGGAAAGTGTCGCATGAG+AGG 0.604782 5_4:+44605675 None:intergenic
CAAATGAAGAGGCTTTGAAG+TGG 0.621865 5_4:-44607335 Msa0853090:CDS
TCTTTGCTATCTCAGCCCAA+CGG 0.628371 5_4:+44605887 None:intergenic
TTCATGGATAGATTCTTATG+GGG 0.633304 5_4:-44607486 Msa0853090:CDS
ATTGAAATCATGGTAAGAGG+AGG 0.636458 5_4:-44607570 None:intergenic
TGGTGTCTTAGCAAATGAAG+AGG 0.638115 5_4:-44607346 Msa0853090:CDS
CTGTCCTTTGATCAAGACCT+CGG 0.642128 5_4:+44607215 None:intergenic
GCAAGCAGTGTAGAGAGCGA+TGG 0.650454 5_4:-44606910 Msa0853090:CDS
AAAACACCAACATTGTGGGA+AGG 0.651290 5_4:-44607257 Msa0853090:CDS
AATATCCTTAAGGCACAATG+TGG 0.654859 5_4:+44607293 None:intergenic
ACATATTCAACAATTGAGAG+AGG 0.676560 5_4:+44605428 None:intergenic
AGGTCTTGATCAAAGGACAG+TGG 0.688341 5_4:-44607212 Msa0853090:CDS
AACTAAGAAAGAGACTTCCG+AGG 0.693403 5_4:-44607232 Msa0853090:CDS
AGTGTCGCATGAGAGGAAGA+GGG 0.721601 5_4:+44605682 None:intergenic
GGTAAGAGGAGGAAATCATG+GGG 0.754185 5_4:-44607559 Msa0853090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGTAACTTTAAAAAAA+AGG - chr5_4:44605881-44605900 Msa0853090:CDS 10.0%
!! ATTATATGAAATCAAAAAAT+GGG + chr5_4:44606146-44606165 None:intergenic 10.0%
!! AATTATATGAAATCAAAAAA+TGG + chr5_4:44606147-44606166 None:intergenic 10.0%
!! TAAAAATGTATGTAATTATT+TGG + chr5_4:44606910-44606929 None:intergenic 10.0%
!!! TAATACTAATTATTTTACTT+GGG - chr5_4:44606990-44607009 Msa0853090:CDS 10.0%
!!! ATTTTGTAACTTTAAAAAAA+AGG - chr5_4:44605881-44605900 Msa0853090:CDS 10.0%
!! ATTATATGAAATCAAAAAAT+GGG + chr5_4:44606146-44606165 None:intergenic 10.0%
!! AATTATATGAAATCAAAAAA+TGG + chr5_4:44606147-44606166 None:intergenic 10.0%
!! TAAAAATGTATGTAATTATT+TGG + chr5_4:44606910-44606929 None:intergenic 10.0%
!!! TAATACTAATTATTTTACTT+GGG - chr5_4:44606990-44607009 Msa0853090:CDS 10.0%
!! GTTAAATTCATATCTTATAT+CGG - chr5_4:44605815-44605834 Msa0853090:CDS 15.0%
!! TTAAATTCATATCTTATATC+GGG - chr5_4:44605816-44605835 Msa0853090:CDS 15.0%
!! TCATAGTTCTTTATAAAAAA+TGG + chr5_4:44605927-44605946 None:intergenic 15.0%
!!! TTATTTGTTATGATGATTAA+AGG - chr5_4:44605978-44605997 Msa0853090:intron 15.0%
!!! ATTTAGATTCATATTTTTCA+AGG - chr5_4:44606333-44606352 Msa0853090:intron 15.0%
!!! ATTTTGTGCTAAATTAATAA+TGG + chr5_4:44606539-44606558 None:intergenic 15.0%
!!! AAAAAGTATCATTTATCAAA+GGG + chr5_4:44606589-44606608 None:intergenic 15.0%
!!! TGAAAATATGTTGTTTATTT+TGG + chr5_4:44606710-44606729 None:intergenic 15.0%
!!! CCTTAAAAATGTTTAAAATT+TGG + chr5_4:44606802-44606821 None:intergenic 15.0%
!!! CCAAATTTTAAACATTTTTA+AGG - chr5_4:44606799-44606818 Msa0853090:intron 15.0%
!!! GTAATACTAATTATTTTACT+TGG - chr5_4:44606989-44607008 Msa0853090:CDS 15.0%
!! GTTAAATTCATATCTTATAT+CGG - chr5_4:44605815-44605834 Msa0853090:CDS 15.0%
!! TTAAATTCATATCTTATATC+GGG - chr5_4:44605816-44605835 Msa0853090:CDS 15.0%
!! TCATAGTTCTTTATAAAAAA+TGG + chr5_4:44605927-44605946 None:intergenic 15.0%
!!! TTATTTGTTATGATGATTAA+AGG - chr5_4:44605978-44605997 Msa0853090:intron 15.0%
!!! ATTTAGATTCATATTTTTCA+AGG - chr5_4:44606333-44606352 Msa0853090:intron 15.0%
!!! ATTTTGTGCTAAATTAATAA+TGG + chr5_4:44606539-44606558 None:intergenic 15.0%
!!! AAAAAGTATCATTTATCAAA+GGG + chr5_4:44606589-44606608 None:intergenic 15.0%
!!! TGAAAATATGTTGTTTATTT+TGG + chr5_4:44606710-44606729 None:intergenic 15.0%
!!! CCTTAAAAATGTTTAAAATT+TGG + chr5_4:44606802-44606821 None:intergenic 15.0%
!!! CCAAATTTTAAACATTTTTA+AGG - chr5_4:44606799-44606818 Msa0853090:intron 15.0%
!!! GTAATACTAATTATTTTACT+TGG - chr5_4:44606989-44607008 Msa0853090:CDS 15.0%
!! CGATTAAAAAAGAATATAAG+AGG + chr5_4:44605850-44605869 None:intergenic 20.0%
!! ATATATCTAACCTTAATATC+AGG + chr5_4:44606118-44606137 None:intergenic 20.0%
!!! CAAAAAGTATCATTTATCAA+AGG + chr5_4:44606590-44606609 None:intergenic 20.0%
!! ATGACATATTTCAAATGTTA+AGG + chr5_4:44606643-44606662 None:intergenic 20.0%
!!! TGAAATATGTCATTTTTGAT+TGG - chr5_4:44606650-44606669 Msa0853090:intron 20.0%
!!! ACTTTGAAATATGTTGTTTA+TGG + chr5_4:44606746-44606765 None:intergenic 20.0%
!!! AAATATAAGTATTGCATATG+AGG + chr5_4:44606869-44606888 None:intergenic 20.0%
!! AAAATGCCATAAAAAATCAT+TGG - chr5_4:44607141-44607160 Msa0853090:intron 20.0%
!! AAGAATGAAAATAATTCCAA+GGG - chr5_4:44607206-44607225 Msa0853090:CDS 20.0%
!! CGATTAAAAAAGAATATAAG+AGG + chr5_4:44605850-44605869 None:intergenic 20.0%
!! ATATATCTAACCTTAATATC+AGG + chr5_4:44606118-44606137 None:intergenic 20.0%
!!! CAAAAAGTATCATTTATCAA+AGG + chr5_4:44606590-44606609 None:intergenic 20.0%
!! ATGACATATTTCAAATGTTA+AGG + chr5_4:44606643-44606662 None:intergenic 20.0%
!!! TGAAATATGTCATTTTTGAT+TGG - chr5_4:44606650-44606669 Msa0853090:intron 20.0%
!!! ACTTTGAAATATGTTGTTTA+TGG + chr5_4:44606746-44606765 None:intergenic 20.0%
!!! AAATATAAGTATTGCATATG+AGG + chr5_4:44606869-44606888 None:intergenic 20.0%
!! AAAATGCCATAAAAAATCAT+TGG - chr5_4:44607141-44607160 Msa0853090:intron 20.0%
!! AAGAATGAAAATAATTCCAA+GGG - chr5_4:44607206-44607225 Msa0853090:CDS 20.0%
! ATAAGAATCTATCCATGAAA+GGG + chr5_4:44605500-44605519 None:intergenic 25.0%
! TTTCATGGATAGATTCTTAT+GGG - chr5_4:44605500-44605519 Msa0853090:CDS 25.0%
! TTAAAGGAAACTGATAAAGT+TGG - chr5_4:44605994-44606013 Msa0853090:intron 25.0%
!! ATAAAGTTGGTTAAGCAATA+TGG - chr5_4:44606007-44606026 Msa0853090:intron 25.0%
! TGAATCTAAATCTAGATCAT+CGG + chr5_4:44606324-44606343 None:intergenic 25.0%
! ATAAATCATCAATCTTGATG+TGG - chr5_4:44606506-44606525 Msa0853090:intron 25.0%
! TAAATCATCAATCTTGATGT+GGG - chr5_4:44606507-44606526 Msa0853090:intron 25.0%
! ATGTATGTAATTATTTGGAG+AGG + chr5_4:44606905-44606924 None:intergenic 25.0%
!! TATTTTCACAGAAAGATAGT+TGG - chr5_4:44607027-44607046 Msa0853090:intron 25.0%
! GAAGAATGAAAATAATTCCA+AGG - chr5_4:44607205-44607224 Msa0853090:CDS 25.0%
!!! GATATAGTTTTCAAGTATGT+AGG + chr5_4:44607246-44607265 None:intergenic 25.0%
!!! GATTTGATTGATTTTCTTCA+TGG + chr5_4:44607340-44607359 None:intergenic 25.0%
! GAAGGTAATTCATTGAAAAA+AGG + chr5_4:44607362-44607381 None:intergenic 25.0%
! TTGTATGAAGTGTAATTCAT+TGG + chr5_4:44607396-44607415 None:intergenic 25.0%
!! CTTCATACAACAAATTTTGA+TGG - chr5_4:44607406-44607425 Msa0853090:CDS 25.0%
! ATAAGAATCTATCCATGAAA+GGG + chr5_4:44605500-44605519 None:intergenic 25.0%
! TTTCATGGATAGATTCTTAT+GGG - chr5_4:44605500-44605519 Msa0853090:CDS 25.0%
! TTAAAGGAAACTGATAAAGT+TGG - chr5_4:44605994-44606013 Msa0853090:intron 25.0%
!! ATAAAGTTGGTTAAGCAATA+TGG - chr5_4:44606007-44606026 Msa0853090:intron 25.0%
! TGAATCTAAATCTAGATCAT+CGG + chr5_4:44606324-44606343 None:intergenic 25.0%
! ATAAATCATCAATCTTGATG+TGG - chr5_4:44606506-44606525 Msa0853090:intron 25.0%
! TAAATCATCAATCTTGATGT+GGG - chr5_4:44606507-44606526 Msa0853090:intron 25.0%
! ATGTATGTAATTATTTGGAG+AGG + chr5_4:44606905-44606924 None:intergenic 25.0%
!! TATTTTCACAGAAAGATAGT+TGG - chr5_4:44607027-44607046 Msa0853090:intron 25.0%
! GAAGAATGAAAATAATTCCA+AGG - chr5_4:44607205-44607224 Msa0853090:CDS 25.0%
!!! GATATAGTTTTCAAGTATGT+AGG + chr5_4:44607246-44607265 None:intergenic 25.0%
!!! GATTTGATTGATTTTCTTCA+TGG + chr5_4:44607340-44607359 None:intergenic 25.0%
! GAAGGTAATTCATTGAAAAA+AGG + chr5_4:44607362-44607381 None:intergenic 25.0%
! TTGTATGAAGTGTAATTCAT+TGG + chr5_4:44607396-44607415 None:intergenic 25.0%
!! CTTCATACAACAAATTTTGA+TGG - chr5_4:44607406-44607425 Msa0853090:CDS 25.0%
CATAAGAATCTATCCATGAA+AGG + chr5_4:44605501-44605520 None:intergenic 30.0%
CTTTCATGGATAGATTCTTA+TGG - chr5_4:44605499-44605518 Msa0853090:CDS 30.0%
TTCATGGATAGATTCTTATG+GGG - chr5_4:44605501-44605520 Msa0853090:CDS 30.0%
!!! CATTGTTTTGTTGATGGTTA+GGG + chr5_4:44605542-44605561 None:intergenic 30.0%
!! TACTTGCATTGTTTTGTTGA+TGG + chr5_4:44605548-44605567 None:intergenic 30.0%
AAGCTTGATTCTTGAGTATT+TGG + chr5_4:44605612-44605631 None:intergenic 30.0%
CATAACCTTGAATATCCTTA+AGG + chr5_4:44605707-44605726 None:intergenic 30.0%
CTTAAGGATATTCAAGGTTA+TGG - chr5_4:44605705-44605724 Msa0853090:CDS 30.0%
ATCTAGATCATCGGATAAAT+AGG + chr5_4:44606315-44606334 None:intergenic 30.0%
!! TGTTTGTTATCTGCATACAT+AGG - chr5_4:44606381-44606400 Msa0853090:intron 30.0%
!!! GGCATTCCAATGATTTTTTA+TGG + chr5_4:44607150-44607169 None:intergenic 30.0%
! TGAATTTTGTCTCCTTTTAG+TGG + chr5_4:44607171-44607190 None:intergenic 30.0%
!!! TTTTCAAGTATGTAGGACTT+TGG + chr5_4:44607239-44607258 None:intergenic 30.0%
!!! GTTGGTAATTTTTGTAGTGA+TGG + chr5_4:44607282-44607301 None:intergenic 30.0%
! TTGATTTTCTTCATGGCTAA+AGG + chr5_4:44607333-44607352 None:intergenic 30.0%
TCATTGGAAAAAGATTCAGA+AGG + chr5_4:44607380-44607399 None:intergenic 30.0%
AGGAAATTATTCATTGAGGT+AGG + chr5_4:44607524-44607543 None:intergenic 30.0%
AGGAAGGAAATTATTCATTG+AGG + chr5_4:44607528-44607547 None:intergenic 30.0%
ACATATTCAACAATTGAGAG+AGG + chr5_4:44607562-44607581 None:intergenic 30.0%
CATAAGAATCTATCCATGAA+AGG + chr5_4:44605501-44605520 None:intergenic 30.0%
CTTTCATGGATAGATTCTTA+TGG - chr5_4:44605499-44605518 Msa0853090:CDS 30.0%
TTCATGGATAGATTCTTATG+GGG - chr5_4:44605501-44605520 Msa0853090:CDS 30.0%
!!! CATTGTTTTGTTGATGGTTA+GGG + chr5_4:44605542-44605561 None:intergenic 30.0%
!! TACTTGCATTGTTTTGTTGA+TGG + chr5_4:44605548-44605567 None:intergenic 30.0%
AAGCTTGATTCTTGAGTATT+TGG + chr5_4:44605612-44605631 None:intergenic 30.0%
CATAACCTTGAATATCCTTA+AGG + chr5_4:44605707-44605726 None:intergenic 30.0%
CTTAAGGATATTCAAGGTTA+TGG - chr5_4:44605705-44605724 Msa0853090:CDS 30.0%
ATCTAGATCATCGGATAAAT+AGG + chr5_4:44606315-44606334 None:intergenic 30.0%
!! TGTTTGTTATCTGCATACAT+AGG - chr5_4:44606381-44606400 Msa0853090:intron 30.0%
!!! GGCATTCCAATGATTTTTTA+TGG + chr5_4:44607150-44607169 None:intergenic 30.0%
! TGAATTTTGTCTCCTTTTAG+TGG + chr5_4:44607171-44607190 None:intergenic 30.0%
!!! TTTTCAAGTATGTAGGACTT+TGG + chr5_4:44607239-44607258 None:intergenic 30.0%
!!! GTTGGTAATTTTTGTAGTGA+TGG + chr5_4:44607282-44607301 None:intergenic 30.0%
! TTGATTTTCTTCATGGCTAA+AGG + chr5_4:44607333-44607352 None:intergenic 30.0%
TCATTGGAAAAAGATTCAGA+AGG + chr5_4:44607380-44607399 None:intergenic 30.0%
AGGAAATTATTCATTGAGGT+AGG + chr5_4:44607524-44607543 None:intergenic 30.0%
AGGAAGGAAATTATTCATTG+AGG + chr5_4:44607528-44607547 None:intergenic 30.0%
ACATATTCAACAATTGAGAG+AGG + chr5_4:44607562-44607581 None:intergenic 30.0%
GTCAATGGCGTTAAAATCTT+TGG - chr5_4:44605450-44605469 Msa0853090:CDS 35.0%
AAATGTCAATGACCCTTTCA+TGG - chr5_4:44605485-44605504 Msa0853090:CDS 35.0%
!!! GCATTGTTTTGTTGATGGTT+AGG + chr5_4:44605543-44605562 None:intergenic 35.0%
AGTATGTTCCCTTACTCTTA+TGG - chr5_4:44605564-44605583 Msa0853090:CDS 35.0%
TATTTGGCCACATAAACTCA+TGG + chr5_4:44605596-44605615 None:intergenic 35.0%
!! GAATCAAGCTTTGTTGTTGA+TGG - chr5_4:44605621-44605640 Msa0853090:CDS 35.0%
AATATCCTTAAGGCACAATG+TGG + chr5_4:44605697-44605716 None:intergenic 35.0%
TTGTGCCTTAAGGATATTCA+AGG - chr5_4:44605699-44605718 Msa0853090:CDS 35.0%
AGCAATATGGCGATAGAAAA+TGG - chr5_4:44606020-44606039 Msa0853090:intron 35.0%
GCAATATGGCGATAGAAAAT+GGG - chr5_4:44606021-44606040 Msa0853090:intron 35.0%
CAAATAGCTGAGAAGTTAGA+AGG - chr5_4:44606046-44606065 Msa0853090:intron 35.0%
TCATTTGCGTCCTGATATTA+AGG - chr5_4:44606105-44606124 Msa0853090:intron 35.0%
! TGTGCTACTATATCATCCTA+GGG + chr5_4:44606200-44606219 None:intergenic 35.0%
! TTGTGCTACTATATCATCCT+AGG + chr5_4:44606201-44606220 None:intergenic 35.0%
! TTCAAGGATCTGTGTCTTTT+AGG - chr5_4:44606349-44606368 Msa0853090:intron 35.0%
! TCAAGGATCTGTGTCTTTTA+GGG - chr5_4:44606350-44606369 Msa0853090:intron 35.0%
!! AACCTTACAGCTTTAGAACT+TGG - chr5_4:44606836-44606855 Msa0853090:intron 35.0%
ATCATTGGAATGCCACTAAA+AGG - chr5_4:44607156-44607175 Msa0853090:intron 35.0%
! GGTAATTTTTGTAGTGATGG+AGG + chr5_4:44607279-44607298 None:intergenic 35.0%
GCATGTTGTAATTTGGGTAT+TGG + chr5_4:44607490-44607509 None:intergenic 35.0%
CCAAGTGCATGTTGTAATTT+GGG + chr5_4:44607496-44607515 None:intergenic 35.0%
TCCAAGTGCATGTTGTAATT+TGG + chr5_4:44607497-44607516 None:intergenic 35.0%
AGAGGTAAAGATCATAAGGA+AGG + chr5_4:44607544-44607563 None:intergenic 35.0%
TGAGAGAGGTAAAGATCATA+AGG + chr5_4:44607548-44607567 None:intergenic 35.0%
GTCAATGGCGTTAAAATCTT+TGG - chr5_4:44605450-44605469 Msa0853090:CDS 35.0%
AAATGTCAATGACCCTTTCA+TGG - chr5_4:44605485-44605504 Msa0853090:CDS 35.0%
!!! GCATTGTTTTGTTGATGGTT+AGG + chr5_4:44605543-44605562 None:intergenic 35.0%
AGTATGTTCCCTTACTCTTA+TGG - chr5_4:44605564-44605583 Msa0853090:CDS 35.0%
TATTTGGCCACATAAACTCA+TGG + chr5_4:44605596-44605615 None:intergenic 35.0%
!! GAATCAAGCTTTGTTGTTGA+TGG - chr5_4:44605621-44605640 Msa0853090:CDS 35.0%
AATATCCTTAAGGCACAATG+TGG + chr5_4:44605697-44605716 None:intergenic 35.0%
TTGTGCCTTAAGGATATTCA+AGG - chr5_4:44605699-44605718 Msa0853090:CDS 35.0%
AGCAATATGGCGATAGAAAA+TGG - chr5_4:44606020-44606039 Msa0853090:intron 35.0%
GCAATATGGCGATAGAAAAT+GGG - chr5_4:44606021-44606040 Msa0853090:intron 35.0%
CAAATAGCTGAGAAGTTAGA+AGG - chr5_4:44606046-44606065 Msa0853090:intron 35.0%
TCATTTGCGTCCTGATATTA+AGG - chr5_4:44606105-44606124 Msa0853090:intron 35.0%
! TGTGCTACTATATCATCCTA+GGG + chr5_4:44606200-44606219 None:intergenic 35.0%
! TTGTGCTACTATATCATCCT+AGG + chr5_4:44606201-44606220 None:intergenic 35.0%
! TTCAAGGATCTGTGTCTTTT+AGG - chr5_4:44606349-44606368 Msa0853090:intron 35.0%
! TCAAGGATCTGTGTCTTTTA+GGG - chr5_4:44606350-44606369 Msa0853090:intron 35.0%
!! AACCTTACAGCTTTAGAACT+TGG - chr5_4:44606836-44606855 Msa0853090:intron 35.0%
ATCATTGGAATGCCACTAAA+AGG - chr5_4:44607156-44607175 Msa0853090:intron 35.0%
! GGTAATTTTTGTAGTGATGG+AGG + chr5_4:44607279-44607298 None:intergenic 35.0%
GCATGTTGTAATTTGGGTAT+TGG + chr5_4:44607490-44607509 None:intergenic 35.0%
CCAAGTGCATGTTGTAATTT+GGG + chr5_4:44607496-44607515 None:intergenic 35.0%
TCCAAGTGCATGTTGTAATT+TGG + chr5_4:44607497-44607516 None:intergenic 35.0%
AGAGGTAAAGATCATAAGGA+AGG + chr5_4:44607544-44607563 None:intergenic 35.0%
TGAGAGAGGTAAAGATCATA+AGG + chr5_4:44607548-44607567 None:intergenic 35.0%
ATGGTAAGAGGAGGAAATCA+TGG - chr5_4:44605426-44605445 Msa0853090:CDS 40.0%
TGGTAAGAGGAGGAAATCAT+GGG - chr5_4:44605427-44605446 Msa0853090:CDS 40.0%
GGTTGGAACCATAAGAGTAA+GGG + chr5_4:44605575-44605594 None:intergenic 40.0%
TGGTTGGAACCATAAGAGTA+AGG + chr5_4:44605576-44605595 None:intergenic 40.0%
GTTCCAACCATGAGTTTATG+TGG - chr5_4:44605586-44605605 Msa0853090:CDS 40.0%
TGGTGTCTTAGCAAATGAAG+AGG - chr5_4:44605641-44605660 Msa0853090:CDS 40.0%
!! CAAATGAAGAGGCTTTGAAG+TGG - chr5_4:44605652-44605671 Msa0853090:CDS 40.0%
TAAGGCACAATGTGGAAGTT+TGG + chr5_4:44605689-44605708 None:intergenic 40.0%
AACTTCCACATTGTGCCTTA+AGG - chr5_4:44605689-44605708 Msa0853090:CDS 40.0%
TGGTGAAAACACCAACATTG+TGG - chr5_4:44605725-44605744 Msa0853090:CDS 40.0%
GGTGAAAACACCAACATTGT+GGG - chr5_4:44605726-44605745 Msa0853090:CDS 40.0%
AAAACACCAACATTGTGGGA+AGG - chr5_4:44605730-44605749 Msa0853090:CDS 40.0%
AGTTATCCTTCCCACAATGT+TGG + chr5_4:44605739-44605758 None:intergenic 40.0%
AACTAAGAAAGAGACTTCCG+AGG - chr5_4:44605755-44605774 Msa0853090:CDS 40.0%
TAGCTGAGAAGTTAGAAGGA+AGG - chr5_4:44606050-44606069 Msa0853090:intron 40.0%
AGCTGAGAAGTTAGAAGGAA+GGG - chr5_4:44606051-44606070 Msa0853090:intron 40.0%
TTGTGCTTGAATTTGACCCT+AGG - chr5_4:44606181-44606200 Msa0853090:intron 40.0%
!! TGCCAAGTTCTAAAGCTGTA+AGG + chr5_4:44606841-44606860 None:intergenic 40.0%
GTAGCTACACATGCCAAAAT+TGG - chr5_4:44607074-44607093 Msa0853090:intron 40.0%
ATGCCAAAATTGGAAACCGT+TGG - chr5_4:44607084-44607103 Msa0853090:intron 40.0%
TGCCAAAATTGGAAACCGTT+GGG - chr5_4:44607085-44607104 Msa0853090:intron 40.0%
GAGATAGCAAAGAAGATTCC+AGG - chr5_4:44607110-44607129 Msa0853090:intron 40.0%
! ATGGCATTTTCAGTTCTTCC+TGG + chr5_4:44607131-44607150 None:intergenic 40.0%
!! TTTTGTAGTGATGGAGGTGT+TGG + chr5_4:44607273-44607292 None:intergenic 40.0%
CCCAAATTACAACATGCACT+TGG - chr5_4:44607493-44607512 Msa0853090:CDS 40.0%
ATGGTAAGAGGAGGAAATCA+TGG - chr5_4:44605426-44605445 Msa0853090:CDS 40.0%
TGGTAAGAGGAGGAAATCAT+GGG - chr5_4:44605427-44605446 Msa0853090:CDS 40.0%
GGTTGGAACCATAAGAGTAA+GGG + chr5_4:44605575-44605594 None:intergenic 40.0%
TGGTTGGAACCATAAGAGTA+AGG + chr5_4:44605576-44605595 None:intergenic 40.0%
GTTCCAACCATGAGTTTATG+TGG - chr5_4:44605586-44605605 Msa0853090:CDS 40.0%
TGGTGTCTTAGCAAATGAAG+AGG - chr5_4:44605641-44605660 Msa0853090:CDS 40.0%
!! CAAATGAAGAGGCTTTGAAG+TGG - chr5_4:44605652-44605671 Msa0853090:CDS 40.0%
TAAGGCACAATGTGGAAGTT+TGG + chr5_4:44605689-44605708 None:intergenic 40.0%
AACTTCCACATTGTGCCTTA+AGG - chr5_4:44605689-44605708 Msa0853090:CDS 40.0%
TGGTGAAAACACCAACATTG+TGG - chr5_4:44605725-44605744 Msa0853090:CDS 40.0%
GGTGAAAACACCAACATTGT+GGG - chr5_4:44605726-44605745 Msa0853090:CDS 40.0%
AAAACACCAACATTGTGGGA+AGG - chr5_4:44605730-44605749 Msa0853090:CDS 40.0%
AGTTATCCTTCCCACAATGT+TGG + chr5_4:44605739-44605758 None:intergenic 40.0%
AACTAAGAAAGAGACTTCCG+AGG - chr5_4:44605755-44605774 Msa0853090:CDS 40.0%
TAGCTGAGAAGTTAGAAGGA+AGG - chr5_4:44606050-44606069 Msa0853090:intron 40.0%
AGCTGAGAAGTTAGAAGGAA+GGG - chr5_4:44606051-44606070 Msa0853090:intron 40.0%
TTGTGCTTGAATTTGACCCT+AGG - chr5_4:44606181-44606200 Msa0853090:intron 40.0%
!! TGCCAAGTTCTAAAGCTGTA+AGG + chr5_4:44606841-44606860 None:intergenic 40.0%
GTAGCTACACATGCCAAAAT+TGG - chr5_4:44607074-44607093 Msa0853090:intron 40.0%
ATGCCAAAATTGGAAACCGT+TGG - chr5_4:44607084-44607103 Msa0853090:intron 40.0%
TGCCAAAATTGGAAACCGTT+GGG - chr5_4:44607085-44607104 Msa0853090:intron 40.0%
GAGATAGCAAAGAAGATTCC+AGG - chr5_4:44607110-44607129 Msa0853090:intron 40.0%
! ATGGCATTTTCAGTTCTTCC+TGG + chr5_4:44607131-44607150 None:intergenic 40.0%
!! TTTTGTAGTGATGGAGGTGT+TGG + chr5_4:44607273-44607292 None:intergenic 40.0%
CCCAAATTACAACATGCACT+TGG - chr5_4:44607493-44607512 Msa0853090:CDS 40.0%
GGTAAGAGGAGGAAATCATG+GGG - chr5_4:44605428-44605447 Msa0853090:CDS 45.0%
TGGCCACATAAACTCATGGT+TGG + chr5_4:44605592-44605611 None:intergenic 45.0%
ACTTCCGAGGTCTTGATCAA+AGG - chr5_4:44605768-44605787 Msa0853090:CDS 45.0%
CTGTCCTTTGATCAAGACCT+CGG + chr5_4:44605775-44605794 None:intergenic 45.0%
AGGTCTTGATCAAAGGACAG+TGG - chr5_4:44605775-44605794 Msa0853090:CDS 45.0%
AGTGGACAAACGAAGAAGAC+AGG - chr5_4:44605793-44605812 Msa0853090:CDS 45.0%
GAGAAGTTAGAAGGAAGGGT+TGG - chr5_4:44606055-44606074 Msa0853090:intron 45.0%
! AGCCCAACGGTTTCCAATTT+TGG + chr5_4:44607090-44607109 None:intergenic 45.0%
! TCTTTGCTATCTCAGCCCAA+CGG + chr5_4:44607103-44607122 None:intergenic 45.0%
!!! GGACTTTGGTTTTGATCCCT+TGG + chr5_4:44607225-44607244 None:intergenic 45.0%
! ATGAGAGGAAGAGGGTATGT+TGG + chr5_4:44607300-44607319 None:intergenic 45.0%
!! AAAGGAAAGTGTCGCATGAG+AGG + chr5_4:44607315-44607334 None:intergenic 45.0%
GGTAAGAGGAGGAAATCATG+GGG - chr5_4:44605428-44605447 Msa0853090:CDS 45.0%
TGGCCACATAAACTCATGGT+TGG + chr5_4:44605592-44605611 None:intergenic 45.0%
ACTTCCGAGGTCTTGATCAA+AGG - chr5_4:44605768-44605787 Msa0853090:CDS 45.0%
CTGTCCTTTGATCAAGACCT+CGG + chr5_4:44605775-44605794 None:intergenic 45.0%
AGGTCTTGATCAAAGGACAG+TGG - chr5_4:44605775-44605794 Msa0853090:CDS 45.0%
AGTGGACAAACGAAGAAGAC+AGG - chr5_4:44605793-44605812 Msa0853090:CDS 45.0%
GAGAAGTTAGAAGGAAGGGT+TGG - chr5_4:44606055-44606074 Msa0853090:intron 45.0%
! AGCCCAACGGTTTCCAATTT+TGG + chr5_4:44607090-44607109 None:intergenic 45.0%
! TCTTTGCTATCTCAGCCCAA+CGG + chr5_4:44607103-44607122 None:intergenic 45.0%
!!! GGACTTTGGTTTTGATCCCT+TGG + chr5_4:44607225-44607244 None:intergenic 45.0%
! ATGAGAGGAAGAGGGTATGT+TGG + chr5_4:44607300-44607319 None:intergenic 45.0%
!! AAAGGAAAGTGTCGCATGAG+AGG + chr5_4:44607315-44607334 None:intergenic 45.0%
GGAGGAAATCATGGGGTCAA+TGG - chr5_4:44605435-44605454 Msa0853090:CDS 50.0%
AGTGTCGCATGAGAGGAAGA+GGG + chr5_4:44607308-44607327 None:intergenic 50.0%
! AAGTGTCGCATGAGAGGAAG+AGG + chr5_4:44607309-44607328 None:intergenic 50.0%
GGAGGAAATCATGGGGTCAA+TGG - chr5_4:44605435-44605454 Msa0853090:CDS 50.0%
AGTGTCGCATGAGAGGAAGA+GGG + chr5_4:44607308-44607327 None:intergenic 50.0%
! AAGTGTCGCATGAGAGGAAG+AGG + chr5_4:44607309-44607328 None:intergenic 50.0%
GCAAGCAGTGTAGAGAGCGA+TGG - chr5_4:44606077-44606096 Msa0853090:intron 55.0%
GCAAGCAGTGTAGAGAGCGA+TGG - chr5_4:44606077-44606096 Msa0853090:intron 55.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 44605426 44607583 44605426 ID=Msa0853090;Name=Msa0853090
chr5_4 mRNA 44605426 44607583 44605426 ID=Msa0853090-mRNA-1;Parent=Msa0853090;Name=Msa0853090-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|3|0|353
chr5_4 exon 44607195 44607583 44607195 ID=Msa0853090-mRNA-1:exon:14125;Parent=Msa0853090-mRNA-1
chr5_4 exon 44606883 44607009 44606883 ID=Msa0853090-mRNA-1:exon:14124;Parent=Msa0853090-mRNA-1
chr5_4 exon 44605426 44605971 44605426 ID=Msa0853090-mRNA-1:exon:14123;Parent=Msa0853090-mRNA-1
chr5_4 CDS 44607195 44607583 44607195 ID=Msa0853090-mRNA-1:cds;Parent=Msa0853090-mRNA-1
chr5_4 CDS 44606883 44607009 44606883 ID=Msa0853090-mRNA-1:cds;Parent=Msa0853090-mRNA-1
chr5_4 CDS 44605426 44605971 44605426 ID=Msa0853090-mRNA-1:cds;Parent=Msa0853090-mRNA-1
Gene Sequence

>Msa0853090

ATGGTAAGAGGAGGAAATCATGGGGTCAATGGCGTTAAAATCTTTGGCAATGAAAATATAAATGTCAATGACCCTTTCATGGATAGATTCTTATGGGGTCAAATGATTCACTACCCTAACCATCAACAAAACAATGCAAGTATGTTCCCTTACTCTTATGGTTCCAACCATGAGTTTATGTGGCCAAATACTCAAGAATCAAGCTTTGTTGTTGATGGTGTCTTAGCAAATGAAGAGGCTTTGAAGTGGACTAACTTCAACCAAACTTCCACATTGTGCCTTAAGGATATTCAAGGTTATGGTGAAAACACCAACATTGTGGGAAGGATAACTAAGAAAGAGACTTCCGAGGTCTTGATCAAAGGACAGTGGACAAACGAAGAAGACAGGAAACTGATAAAGTTGGTTAAGCAATATGGCGATAGAAAATGGGCTCAAATAGCTGAGAAGTTAGAAGGAAGGGTTGGCAAGCAGTGTAGAGAGCGATGGCATAATCATTTGCGTCCTGATATTAAGAAAGATAGTTGGAGTGAAGAAGAAGAGAAGATATTAGTAGCTACACATGCCAAAATTGGAAACCGTTGGGCTGAGATAGCAAAGAAGATTCCAGGAAGAACTGAAAATGCCATAAAAAATCATTGGAATGCCACTAAAAGGAGACAAAATTCAAGAAGAAAGAACAAGAAGAATGAAAATAATTCCAAGGGATCAAAACCAAAGTCCTACATACTTGAAAACTATATCAAAACCAACACCTCCATCACTACAAAAATTACCAACATACCCTCTTCCTCTCATGCGACACTTTCCTTTAGCCATGAAGAAAATCAATCAAATCCTTTTTTCAATGAATTACCTTCTGAATCTTTTTCCAATGAATTACACTTCATACAACAAATTTTGATGGATGATAATAATCAAAATGTTGTTGATGATGTGAATGAGAGTGAGCTTGTTCATTCAATCCAATACCCAAATTACAACATGCACTTGGATACTCCTACCTCAATGAATAATTTCCTTCCTTATGATCTTTACCTCTCTCAATTGTTGAATATGTAG
Protein sequence

>Msa0853090

MVRGGNHGVNGVKIFGNENINVNDPFMDRFLWGQMIHYPNHQQNNASMFPYSYGSNHEFMWPNTQESSFVVDGVLANEEALKWTNFNQTSTLCLKDIQGYGENTNIVGRITKKETSEVLIKGQWTNEEDRKLIKLVKQYGDRKWAQIAEKLEGRVGKQCRERWHNHLRPDIKKDSWSEEEEKILVATHAKIGNRWAEIAKKIPGRTENAIKNHWNATKRRQNSRRKNKKNENNSKGSKPKSYILENYIKTNTSITTKITNIPSSSHATLSFSHEENQSNPFFNELPSESFSNELHFIQQILMDDNNQNVVDDVNESELVHSIQYPNYNMHLDTPTSMNNFLPYDLYLSQLLNM*