Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0853380 | XP_039690713.1 | 90.511 | 274 | 26 | 0 | 1 | 274 | 1 | 274 | 0.0 | 518 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0853380 | sp|Q8L3W1|VRN1_ARATH | 48.485 | 99 | 51 | 0 | 21 | 119 | 6 | 104 | 5.82e-25 | 104 |
| Msa0853380 | sp|Q8L3W1|VRN1_ARATH | 34.247 | 146 | 74 | 5 | 134 | 273 | 212 | 341 | 3.56e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0853380 | G7KE59 | 90.511 | 274 | 26 | 0 | 1 | 274 | 1 | 274 | 0.0 | 518 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0853380 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0853380 | MtrunA17_Chr5g0429931 | 90.377 | 239 | 23 | 0 | 36 | 274 | 10 | 248 | 4.88e-163 | 452 |
| Msa0853380 | MtrunA17_Chr3g0077451 | 71.967 | 239 | 56 | 2 | 35 | 272 | 10 | 238 | 6.67e-121 | 345 |
| Msa0853380 | MtrunA17_Chr3g0077411 | 66.415 | 265 | 81 | 2 | 16 | 272 | 257 | 521 | 5.93e-119 | 350 |
| Msa0853380 | MtrunA17_Chr3g0077411 | 54.511 | 266 | 94 | 3 | 1 | 262 | 1 | 243 | 1.84e-89 | 275 |
| Msa0853380 | MtrunA17_Chr3g0077431 | 70.335 | 209 | 51 | 2 | 65 | 272 | 1 | 199 | 4.84e-102 | 296 |
| Msa0853380 | MtrunA17_Chr3g0077421 | 66.667 | 210 | 58 | 2 | 65 | 272 | 1 | 200 | 8.87e-96 | 280 |
| Msa0853380 | MtrunA17_Chr3g0077441 | 66.667 | 210 | 58 | 2 | 65 | 272 | 1 | 200 | 8.87e-96 | 280 |
| Msa0853380 | MtrunA17_Chr3g0077361 | 56.554 | 267 | 92 | 3 | 1 | 265 | 20 | 264 | 2.29e-93 | 284 |
| Msa0853380 | MtrunA17_Chr3g0077361 | 55.212 | 259 | 81 | 1 | 16 | 274 | 284 | 507 | 1.43e-89 | 275 |
| Msa0853380 | MtrunA17_Chr4g0009491 | 61.611 | 211 | 81 | 0 | 16 | 226 | 220 | 430 | 1.95e-85 | 261 |
| Msa0853380 | MtrunA17_Chr4g0009491 | 52.113 | 213 | 80 | 1 | 35 | 247 | 11 | 201 | 1.64e-65 | 210 |
| Msa0853380 | MtrunA17_Chr3g0077461 | 54.789 | 261 | 96 | 7 | 10 | 266 | 225 | 467 | 1.95e-82 | 255 |
| Msa0853380 | MtrunA17_Chr3g0077461 | 51.055 | 237 | 85 | 3 | 36 | 271 | 22 | 228 | 1.98e-71 | 226 |
| Msa0853380 | MtrunA17_Chr3g0077381 | 59.716 | 211 | 78 | 1 | 16 | 226 | 242 | 445 | 4.36e-80 | 248 |
| Msa0853380 | MtrunA17_Chr3g0077381 | 50.644 | 233 | 69 | 3 | 35 | 265 | 34 | 222 | 3.62e-64 | 207 |
| Msa0853380 | MtrunA17_Chr1g0162441 | 48.485 | 99 | 51 | 0 | 21 | 119 | 7 | 105 | 1.24e-29 | 115 |
| Msa0853380 | MtrunA17_Chr1g0162441 | 34.266 | 143 | 69 | 5 | 134 | 268 | 267 | 392 | 2.84e-12 | 66.2 |
| Msa0853380 | MtrunA17_Chr7g0233521 | 28.938 | 273 | 148 | 8 | 37 | 271 | 2 | 266 | 5.12e-27 | 106 |
| Msa0853380 | MtrunA17_Chr3g0131891 | 28.041 | 296 | 174 | 8 | 14 | 271 | 12 | 306 | 1.40e-26 | 105 |
| Msa0853380 | MtrunA17_Chr4g0033961 | 36.025 | 161 | 97 | 2 | 18 | 173 | 3 | 162 | 7.99e-26 | 105 |
| Msa0853380 | MtrunA17_Chr4g0033961 | 34.247 | 146 | 71 | 5 | 134 | 271 | 263 | 391 | 2.83e-13 | 69.3 |
| Msa0853380 | MtrunA17_Chr3g0103171 | 29.104 | 268 | 147 | 7 | 36 | 267 | 5 | 265 | 1.97e-25 | 101 |
| Msa0853380 | MtrunA17_Chr8g0390841 | 25.667 | 300 | 164 | 7 | 21 | 268 | 39 | 331 | 2.68e-25 | 104 |
| Msa0853380 | MtrunA17_Chr3g0103181 | 27.437 | 277 | 164 | 6 | 20 | 267 | 11 | 279 | 1.45e-24 | 99.4 |
| Msa0853380 | MtrunA17_Chr1g0162411 | 48.889 | 90 | 46 | 0 | 21 | 110 | 7 | 96 | 4.23e-24 | 100 |
| Msa0853380 | MtrunA17_Chr7g0233561 | 27.575 | 301 | 167 | 8 | 20 | 271 | 17 | 315 | 2.39e-23 | 97.1 |
| Msa0853380 | MtrunA17_Chr1g0208771 | 25.436 | 287 | 154 | 8 | 36 | 269 | 12 | 291 | 8.91e-21 | 91.3 |
| Msa0853380 | MtrunA17_Chr1g0163071 | 25.676 | 296 | 146 | 8 | 37 | 268 | 2 | 287 | 5.02e-20 | 87.8 |
| Msa0853380 | MtrunA17_Chr1g0154161 | 23.592 | 284 | 179 | 6 | 20 | 269 | 29 | 308 | 5.53e-20 | 87.8 |
| Msa0853380 | MtrunA17_Chr7g0233571 | 33.835 | 133 | 76 | 1 | 20 | 140 | 9 | 141 | 7.92e-20 | 85.5 |
| Msa0853380 | MtrunA17_Chr5g0421921 | 40.566 | 106 | 62 | 1 | 167 | 272 | 8 | 112 | 8.13e-20 | 82.4 |
| Msa0853380 | MtrunA17_Chr5g0421731 | 40.566 | 106 | 62 | 1 | 167 | 272 | 8 | 112 | 8.13e-20 | 82.4 |
| Msa0853380 | MtrunA17_Chr5g0419201 | 29.697 | 165 | 105 | 2 | 21 | 185 | 16 | 169 | 9.14e-20 | 84.7 |
| Msa0853380 | MtrunA17_Chr7g0233531 | 27.737 | 274 | 150 | 7 | 37 | 271 | 2 | 266 | 1.88e-19 | 85.5 |
| Msa0853380 | MtrunA17_Chr5g0421851 | 40.566 | 106 | 62 | 1 | 167 | 272 | 83 | 187 | 3.74e-19 | 82.8 |
| Msa0853380 | MtrunA17_Chr7g0233541 | 25.685 | 292 | 150 | 8 | 37 | 271 | 2 | 283 | 4.52e-19 | 84.7 |
| Msa0853380 | MtrunA17_Chr1g0163221 | 26.102 | 295 | 173 | 8 | 12 | 267 | 2 | 290 | 7.62e-19 | 85.1 |
| Msa0853380 | MtrunA17_Chr3g0103151 | 40.000 | 100 | 58 | 1 | 20 | 119 | 11 | 108 | 7.06e-18 | 78.6 |
| Msa0853380 | MtrunA17_Chr1g0162421 | 50.000 | 58 | 29 | 0 | 35 | 92 | 7 | 64 | 8.80e-18 | 75.5 |
| Msa0853380 | MtrunA17_Chr3g0103191 | 35.172 | 145 | 87 | 3 | 21 | 163 | 12 | 151 | 1.94e-17 | 79.7 |
| Msa0853380 | MtrunA17_Chr4g0067431 | 26.174 | 298 | 170 | 10 | 20 | 267 | 14 | 311 | 1.02e-15 | 75.9 |
| Msa0853380 | MtrunA17_Chr6g0467351 | 31.655 | 139 | 91 | 2 | 20 | 154 | 14 | 152 | 8.99e-15 | 72.0 |
| Msa0853380 | MtrunA17_Chr1g0163261 | 25.175 | 286 | 171 | 10 | 19 | 269 | 7 | 284 | 3.20e-14 | 71.2 |
| Msa0853380 | MtrunA17_Chr3g0103201 | 23.894 | 226 | 124 | 6 | 80 | 267 | 5 | 220 | 3.12e-13 | 67.4 |
| Msa0853380 | MtrunA17_Chr1g0163251 | 22.794 | 272 | 176 | 8 | 30 | 270 | 14 | 282 | 3.28e-13 | 68.9 |
| Msa0853380 | MtrunA17_Chr1g0154131 | 23.985 | 271 | 157 | 11 | 29 | 274 | 32 | 278 | 3.73e-13 | 68.9 |
| Msa0853380 | MtrunA17_Chr1g0171611 | 25.092 | 271 | 174 | 9 | 19 | 269 | 7 | 268 | 1.29e-12 | 66.6 |
| Msa0853380 | MtrunA17_Chr1g0154041 | 30.928 | 97 | 66 | 1 | 20 | 116 | 15 | 110 | 2.14e-12 | 67.0 |
| Msa0853380 | MtrunA17_Chr1g0163061 | 30.769 | 130 | 80 | 2 | 20 | 139 | 14 | 143 | 4.00e-12 | 65.1 |
| Msa0853380 | MtrunA17_Chr1g0154101 | 31.579 | 95 | 65 | 0 | 20 | 114 | 24 | 118 | 1.68e-11 | 64.3 |
| Msa0853380 | MtrunA17_Chr1g0154101 | 34.737 | 95 | 60 | 2 | 20 | 114 | 183 | 275 | 3.92e-11 | 63.2 |
| Msa0853380 | MtrunA17_Chr1g0163231 | 23.273 | 275 | 182 | 9 | 21 | 269 | 9 | 280 | 2.65e-11 | 62.8 |
| Msa0853380 | MtrunA17_Chr1g0154191 | 33.684 | 95 | 63 | 0 | 20 | 114 | 21 | 115 | 7.10e-11 | 62.0 |
| Msa0853380 | MtrunA17_Chr1g0154171 | 36.709 | 79 | 50 | 0 | 33 | 111 | 34 | 112 | 7.97e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0853380 | AT3G18990.1 | 48.485 | 99 | 51 | 0 | 21 | 119 | 6 | 104 | 5.91e-26 | 104 |
| Msa0853380 | AT3G18990.1 | 34.247 | 146 | 74 | 5 | 134 | 273 | 212 | 341 | 3.62e-12 | 66.2 |
| Msa0853380 | AT3G18990.2 | 48.485 | 99 | 51 | 0 | 21 | 119 | 6 | 104 | 1.15e-25 | 104 |
| Msa0853380 | AT3G18990.2 | 34.694 | 147 | 74 | 5 | 134 | 274 | 212 | 342 | 1.71e-12 | 67.0 |
| Msa0853380 | AT4G01580.1 | 40.367 | 109 | 65 | 0 | 13 | 121 | 22 | 130 | 2.02e-20 | 86.7 |
| Msa0853380 | AT3G18960.2 | 38.889 | 108 | 66 | 0 | 14 | 121 | 23 | 130 | 5.99e-19 | 82.8 |
| Msa0853380 | AT3G18960.1 | 38.889 | 108 | 66 | 0 | 14 | 121 | 23 | 130 | 9.12e-19 | 82.8 |
| Msa0853380 | AT1G49475.1 | 38.793 | 116 | 70 | 1 | 14 | 129 | 27 | 141 | 1.89e-18 | 81.3 |
| Msa0853380 | AT3G18960.3 | 38.636 | 88 | 54 | 0 | 34 | 121 | 6 | 93 | 2.54e-13 | 67.0 |
| Msa0853380 | AT1G49480.3 | 32.919 | 161 | 82 | 6 | 123 | 273 | 82 | 226 | 5.07e-13 | 67.4 |
| Msa0853380 | AT1G49480.1 | 32.919 | 161 | 82 | 6 | 123 | 273 | 82 | 226 | 5.07e-13 | 67.4 |
| Msa0853380 | AT1G49480.2 | 32.919 | 161 | 82 | 6 | 123 | 273 | 82 | 226 | 5.07e-13 | 67.4 |
Find 53 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAGCTTTATAGGAATATT+TGG | 0.189992 | 5_4:+45223114 | None:intergenic |
| ACTGCTCTCCATGAGAATTT+TGG | 0.201463 | 5_4:+45223094 | None:intergenic |
| CCCCTCACTATTTGCATTGC+TGG | 0.224390 | 5_4:+45223036 | None:intergenic |
| AGTGAAGCTTACTATTTCTT+TGG | 0.231343 | 5_4:+45224776 | None:intergenic |
| GATGAATTTATATCAAGATT+TGG | 0.269670 | 5_4:-45223678 | Msa0853380:CDS |
| CAACGAAAATAAGGGTTGTT+TGG | 0.270085 | 5_4:+45223276 | None:intergenic |
| TACTATTTCTTTGGAATGAA+TGG | 0.303913 | 5_4:+45224785 | None:intergenic |
| AGATGGTCGTGTCTGGAAAA+TGG | 0.306967 | 5_4:-45223619 | Msa0853380:CDS |
| ATGAATTTATATCAAGATTT+GGG | 0.336114 | 5_4:-45223677 | Msa0853380:CDS |
| ATGAATGGGTGAGGGAAGTA+TGG | 0.359095 | 5_4:+45224800 | None:intergenic |
| TCCCTTCATATTTGAAAGAA+AGG | 0.361097 | 5_4:+45223511 | None:intergenic |
| ATTATCCTAGTTCTAGAAAA+AGG | 0.363374 | 5_4:-45223395 | Msa0853380:CDS |
| AACGAAAATAAGGGTTGTTT+GGG | 0.366185 | 5_4:+45223277 | None:intergenic |
| GAATACTATTCTATAGGATA+TGG | 0.373789 | 5_4:-45223540 | Msa0853380:CDS |
| ATGTGAGAGGCGTGGGAAAA+AGG | 0.385584 | 5_4:-45223358 | Msa0853380:CDS |
| TTCCTTTCTTTCAAATATGA+AGG | 0.389522 | 5_4:-45223513 | Msa0853380:CDS |
| AATCTTGATATAAATTCATC+TGG | 0.413169 | 5_4:+45223681 | None:intergenic |
| CTGTTCCAGATGGTCGTGTC+TGG | 0.416931 | 5_4:-45223626 | Msa0853380:CDS |
| GTTGTTTGGGTTGAGTTCCT+TGG | 0.432159 | 5_4:+45223290 | None:intergenic |
| ACTATTTCTTTGGAATGAAT+GGG | 0.437997 | 5_4:+45224786 | None:intergenic |
| TTTGTAGAATACTATTCTAT+AGG | 0.438154 | 5_4:-45223546 | Msa0853380:CDS |
| GGAGAGCAGTGGGTAGTGTT+TGG | 0.444007 | 5_4:-45223081 | Msa0853380:CDS |
| TTCTTTGGAATGAATGGGTG+AGG | 0.464859 | 5_4:+45224791 | None:intergenic |
| CCTCTCACATGTTTCAACCT+TGG | 0.481695 | 5_4:+45223371 | None:intergenic |
| CTCGCCGGCGAAAGTGTGTC+CGG | 0.493553 | 5_4:-45224863 | Msa0853380:CDS |
| CCTTCTCCGGTGATGATGTC+CGG | 0.498771 | 5_4:+45224844 | None:intergenic |
| ATAAAGCTCCAAAATTCTCA+TGG | 0.500218 | 5_4:-45223102 | Msa0853380:CDS |
| CACAATAATCTCCATGTGAC+AGG | 0.508749 | 5_4:+45222986 | None:intergenic |
| TCCTTTCTTTCAAATATGAA+GGG | 0.512330 | 5_4:-45223512 | Msa0853380:CDS |
| TTGCAACAATGCAGCCTCGC+CGG | 0.517685 | 5_4:-45224878 | None:intergenic |
| CCGGACATCATCACCGGAGA+AGG | 0.524281 | 5_4:-45224844 | Msa0853380:CDS |
| TCTTTGGAATGAATGGGTGA+GGG | 0.542125 | 5_4:+45224792 | None:intergenic |
| TTGAAACATGTGAGAGGCGT+GGG | 0.548958 | 5_4:-45223365 | Msa0853380:CDS |
| TTTCGTTGCAAAATCGTCAA+GGG | 0.551442 | 5_4:-45223261 | Msa0853380:CDS |
| TTCAAAACTTCGAGTACTAA+CGG | 0.553811 | 5_4:-45223432 | Msa0853380:CDS |
| AAGAGTAGAGGATGCTGCCA+AGG | 0.559277 | 5_4:-45223307 | Msa0853380:CDS |
| ATGTCCGGACACACTTTCGC+CGG | 0.577646 | 5_4:+45224859 | None:intergenic |
| TGAGCTGATCAAGAGGAGGC+CGG | 0.579304 | 5_4:-45222959 | Msa0853380:CDS |
| GTGTGTCCGGACATCATCAC+CGG | 0.579924 | 5_4:-45224850 | Msa0853380:CDS |
| ACCAGCAATGCAAATAGTGA+GGG | 0.598487 | 5_4:-45223037 | Msa0853380:CDS |
| AAATTCTCATGGAGAGCAGT+GGG | 0.599658 | 5_4:-45223091 | Msa0853380:CDS |
| AGGGACAACAACCTGTCACA+TGG | 0.606824 | 5_4:-45222997 | Msa0853380:CDS |
| AAAATTCTCATGGAGAGCAG+TGG | 0.611008 | 5_4:-45223092 | Msa0853380:CDS |
| ATATGCTTCTAAAAGAGTAG+AGG | 0.611088 | 5_4:-45223319 | Msa0853380:CDS |
| GTTGAAACATGTGAGAGGCG+TGG | 0.612877 | 5_4:-45223366 | Msa0853380:CDS |
| CACCAGCAATGCAAATAGTG+AGG | 0.613032 | 5_4:-45223038 | Msa0853380:CDS |
| GCTACAATTACTGTTCCAGA+TGG | 0.621864 | 5_4:-45223636 | Msa0853380:CDS |
| CCAAGGTTGAAACATGTGAG+AGG | 0.654125 | 5_4:-45223371 | Msa0853380:CDS |
| CGGACACACTTTCGCCGGCG+AGG | 0.660589 | 5_4:+45224864 | None:intergenic |
| GTGTGTTTGAGCTGATCAAG+AGG | 0.667194 | 5_4:-45222966 | Msa0853380:CDS |
| AATCGTCAAGGGAAAATATG+CGG | 0.692781 | 5_4:-45223250 | Msa0853380:intron |
| CCAGCAATGCAAATAGTGAG+GGG | 0.692866 | 5_4:-45223036 | Msa0853380:CDS |
| TGTTTGAGCTGATCAAGAGG+AGG | 0.730047 | 5_4:-45222963 | Msa0853380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAGTCAAAA+AGG | + | chr5_4:45223129-45223148 | None:intergenic | 10.0% |
| !!! | TTTTGACTTTTTTTTTTTTT+TGG | - | chr5_4:45223129-45223148 | Msa0853380:CDS | 10.0% |
| !! | AAAAAAAAAAAAAGTCAAAA+AGG | + | chr5_4:45223129-45223148 | None:intergenic | 10.0% |
| !!! | TTTTGACTTTTTTTTTTTTT+TGG | - | chr5_4:45223129-45223148 | Msa0853380:CDS | 10.0% |
| !!! | ATAATAAAAGTACAAAACAA+GGG | + | chr5_4:45223038-45223057 | None:intergenic | 15.0% |
| !!! | AAAATTGATTTTGACATATT+TGG | - | chr5_4:45223302-45223321 | Msa0853380:CDS | 15.0% |
| !!! | ATAAATTCTAATTTGAAGTT+AGG | + | chr5_4:45223861-45223880 | None:intergenic | 15.0% |
| !! | ATGAATTTATATCAAGATTT+GGG | - | chr5_4:45224105-45224124 | Msa0853380:intron | 15.0% |
| !!! | ATAATAAAAGTACAAAACAA+GGG | + | chr5_4:45223038-45223057 | None:intergenic | 15.0% |
| !!! | AAAATTGATTTTGACATATT+TGG | - | chr5_4:45223302-45223321 | Msa0853380:CDS | 15.0% |
| !!! | ATAAATTCTAATTTGAAGTT+AGG | + | chr5_4:45223861-45223880 | None:intergenic | 15.0% |
| !! | ATGAATTTATATCAAGATTT+GGG | - | chr5_4:45224105-45224124 | Msa0853380:intron | 15.0% |
| !!! | CATAATAAAAGTACAAAACA+AGG | + | chr5_4:45223039-45223058 | None:intergenic | 20.0% |
| !! | ATTAAATTCTAACTTCAAGT+TGG | + | chr5_4:45223369-45223388 | None:intergenic | 20.0% |
| !! | CTTGAAGTTAGAATTTAATT+TGG | - | chr5_4:45223370-45223389 | Msa0853380:CDS | 20.0% |
| !! | AATCTTGATATAAATTCATC+TGG | + | chr5_4:45224104-45224123 | None:intergenic | 20.0% |
| !! | GATGAATTTATATCAAGATT+TGG | - | chr5_4:45224104-45224123 | Msa0853380:intron | 20.0% |
| !! | TTTGTAGAATACTATTCTAT+AGG | - | chr5_4:45224236-45224255 | Msa0853380:intron | 20.0% |
| !!! | CATAATAAAAGTACAAAACA+AGG | + | chr5_4:45223039-45223058 | None:intergenic | 20.0% |
| !! | ATTAAATTCTAACTTCAAGT+TGG | + | chr5_4:45223369-45223388 | None:intergenic | 20.0% |
| !! | CTTGAAGTTAGAATTTAATT+TGG | - | chr5_4:45223370-45223389 | Msa0853380:CDS | 20.0% |
| !! | AATCTTGATATAAATTCATC+TGG | + | chr5_4:45224104-45224123 | None:intergenic | 20.0% |
| !! | GATGAATTTATATCAAGATT+TGG | - | chr5_4:45224104-45224123 | Msa0853380:intron | 20.0% |
| !! | TTTGTAGAATACTATTCTAT+AGG | - | chr5_4:45224236-45224255 | Msa0853380:intron | 20.0% |
| !!! | ACTATTTCTTTGGAATGAAT+GGG | + | chr5_4:45222999-45223018 | None:intergenic | 25.0% |
| !!! | TACTATTTCTTTGGAATGAA+TGG | + | chr5_4:45223000-45223019 | None:intergenic | 25.0% |
| !! | TGAGTGTTTCTTTTATTCAA+TGG | - | chr5_4:45223191-45223210 | Msa0853380:intron | 25.0% |
| ! | ATCACTTTCAATTCAACTAA+GGG | + | chr5_4:45223441-45223460 | None:intergenic | 25.0% |
| ! | AATCACTTTCAATTCAACTA+AGG | + | chr5_4:45223442-45223461 | None:intergenic | 25.0% |
| ! | CATACTTTACTTAGTATGTT+TGG | - | chr5_4:45223470-45223489 | Msa0853380:CDS | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | - | chr5_4:45223532-45223551 | Msa0853380:CDS | 25.0% |
| !!! | GTAGATTTTGATTCTTGAAT+TGG | - | chr5_4:45223612-45223631 | Msa0853380:CDS | 25.0% |
| !!! | TGATTCTCTAGAATTGATTT+TGG | + | chr5_4:45223722-45223741 | None:intergenic | 25.0% |
| ! | GAATACTATTCTATAGGATA+TGG | - | chr5_4:45224242-45224261 | Msa0853380:intron | 25.0% |
| ! | TTCCTTTCTTTCAAATATGA+AGG | - | chr5_4:45224269-45224288 | Msa0853380:intron | 25.0% |
| ! | TCCTTTCTTTCAAATATGAA+GGG | - | chr5_4:45224270-45224289 | Msa0853380:intron | 25.0% |
| !!! | GAACTAGGATAATTTGTTTT+TGG | + | chr5_4:45224380-45224399 | None:intergenic | 25.0% |
| !!! | ATTATCCTAGTTCTAGAAAA+AGG | - | chr5_4:45224387-45224406 | Msa0853380:intron | 25.0% |
| ! | AAAATTAACATACTGCACAA+TGG | + | chr5_4:45224624-45224643 | None:intergenic | 25.0% |
| !! | GGGATTTTCTATATTTCAAA+GGG | - | chr5_4:45224766-45224785 | Msa0853380:intron | 25.0% |
| !!! | ACTATTTCTTTGGAATGAAT+GGG | + | chr5_4:45222999-45223018 | None:intergenic | 25.0% |
| !!! | TACTATTTCTTTGGAATGAA+TGG | + | chr5_4:45223000-45223019 | None:intergenic | 25.0% |
| !! | TGAGTGTTTCTTTTATTCAA+TGG | - | chr5_4:45223191-45223210 | Msa0853380:intron | 25.0% |
| ! | ATCACTTTCAATTCAACTAA+GGG | + | chr5_4:45223441-45223460 | None:intergenic | 25.0% |
| ! | AATCACTTTCAATTCAACTA+AGG | + | chr5_4:45223442-45223461 | None:intergenic | 25.0% |
| ! | CATACTTTACTTAGTATGTT+TGG | - | chr5_4:45223470-45223489 | Msa0853380:CDS | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | - | chr5_4:45223532-45223551 | Msa0853380:CDS | 25.0% |
| !!! | GTAGATTTTGATTCTTGAAT+TGG | - | chr5_4:45223612-45223631 | Msa0853380:CDS | 25.0% |
| !!! | TGATTCTCTAGAATTGATTT+TGG | + | chr5_4:45223722-45223741 | None:intergenic | 25.0% |
| ! | GAATACTATTCTATAGGATA+TGG | - | chr5_4:45224242-45224261 | Msa0853380:intron | 25.0% |
| ! | TTCCTTTCTTTCAAATATGA+AGG | - | chr5_4:45224269-45224288 | Msa0853380:intron | 25.0% |
| ! | TCCTTTCTTTCAAATATGAA+GGG | - | chr5_4:45224270-45224289 | Msa0853380:intron | 25.0% |
| !!! | GAACTAGGATAATTTGTTTT+TGG | + | chr5_4:45224380-45224399 | None:intergenic | 25.0% |
| !!! | ATTATCCTAGTTCTAGAAAA+AGG | - | chr5_4:45224387-45224406 | Msa0853380:intron | 25.0% |
| ! | AAAATTAACATACTGCACAA+TGG | + | chr5_4:45224624-45224643 | None:intergenic | 25.0% |
| !! | GGGATTTTCTATATTTCAAA+GGG | - | chr5_4:45224766-45224785 | Msa0853380:intron | 25.0% |
| !!! | AAATGTTTTGATTCCTTCTC+CGG | + | chr5_4:45222954-45222973 | None:intergenic | 30.0% |
| ! | AGTGAAGCTTACTATTTCTT+TGG | + | chr5_4:45223009-45223028 | None:intergenic | 30.0% |
| !!! | ATTTTGAGTTAGTGTGTGTT+TGG | - | chr5_4:45223240-45223259 | Msa0853380:intron | 30.0% |
| !! | CTTCAAGTTGGAAACAATTA+TGG | + | chr5_4:45223357-45223376 | None:intergenic | 30.0% |
| !! | CTTAAAGTGAATGGATTTTG+AGG | + | chr5_4:45223583-45223602 | None:intergenic | 30.0% |
| AAATCCATTCACTTTAAGCT+AGG | - | chr5_4:45223585-45223604 | Msa0853380:CDS | 30.0% | |
| AAATCCTAGCTTAAAGTGAA+TGG | + | chr5_4:45223592-45223611 | None:intergenic | 30.0% | |
| ! | ATCCAAACACAAATCACTTT+TGG | - | chr5_4:45223680-45223699 | Msa0853380:CDS | 30.0% |
| AAATTTATGTTCGCAGCTTT+GGG | + | chr5_4:45223904-45223923 | None:intergenic | 30.0% | |
| AAAATTTATGTTCGCAGCTT+TGG | + | chr5_4:45223905-45223924 | None:intergenic | 30.0% | |
| ! | ACGTTTTCTTTTGCAACAAA+TGG | - | chr5_4:45224207-45224226 | Msa0853380:intron | 30.0% |
| TCCCTTCATATTTGAAAGAA+AGG | + | chr5_4:45224274-45224293 | None:intergenic | 30.0% | |
| !!! | TTAGTACTCGAAGTTTTGAA+AGG | + | chr5_4:45224350-45224369 | None:intergenic | 30.0% |
| TTCAAAACTTCGAGTACTAA+CGG | - | chr5_4:45224350-45224369 | Msa0853380:intron | 30.0% | |
| ! | ATATGCTTCTAAAAGAGTAG+AGG | - | chr5_4:45224463-45224482 | Msa0853380:intron | 30.0% |
| AACGAAAATAAGGGTTGTTT+GGG | + | chr5_4:45224508-45224527 | None:intergenic | 30.0% | |
| ! | CGATTTTGCAACGAAAATAA+GGG | + | chr5_4:45224517-45224536 | None:intergenic | 30.0% |
| ! | ACGATTTTGCAACGAAAATA+AGG | + | chr5_4:45224518-45224537 | None:intergenic | 30.0% |
| ! | TGGAGCTTTATAGGAATATT+TGG | + | chr5_4:45224671-45224690 | None:intergenic | 30.0% |
| !!! | TGAGAATTTTGGAGCTTTAT+AGG | + | chr5_4:45224680-45224699 | None:intergenic | 30.0% |
| ATAAAGCTCCAAAATTCTCA+TGG | - | chr5_4:45224680-45224699 | Msa0853380:intron | 30.0% | |
| ! | GGGGATTTTCTATATTTCAA+AGG | - | chr5_4:45224765-45224784 | Msa0853380:intron | 30.0% |
| !!! | AAATGTTTTGATTCCTTCTC+CGG | + | chr5_4:45222954-45222973 | None:intergenic | 30.0% |
| ! | AGTGAAGCTTACTATTTCTT+TGG | + | chr5_4:45223009-45223028 | None:intergenic | 30.0% |
| !!! | ATTTTGAGTTAGTGTGTGTT+TGG | - | chr5_4:45223240-45223259 | Msa0853380:intron | 30.0% |
| !! | CTTCAAGTTGGAAACAATTA+TGG | + | chr5_4:45223357-45223376 | None:intergenic | 30.0% |
| !! | CTTAAAGTGAATGGATTTTG+AGG | + | chr5_4:45223583-45223602 | None:intergenic | 30.0% |
| AAATCCATTCACTTTAAGCT+AGG | - | chr5_4:45223585-45223604 | Msa0853380:CDS | 30.0% | |
| AAATCCTAGCTTAAAGTGAA+TGG | + | chr5_4:45223592-45223611 | None:intergenic | 30.0% | |
| ! | ATCCAAACACAAATCACTTT+TGG | - | chr5_4:45223680-45223699 | Msa0853380:CDS | 30.0% |
| AAATTTATGTTCGCAGCTTT+GGG | + | chr5_4:45223904-45223923 | None:intergenic | 30.0% | |
| AAAATTTATGTTCGCAGCTT+TGG | + | chr5_4:45223905-45223924 | None:intergenic | 30.0% | |
| ! | ACGTTTTCTTTTGCAACAAA+TGG | - | chr5_4:45224207-45224226 | Msa0853380:intron | 30.0% |
| TCCCTTCATATTTGAAAGAA+AGG | + | chr5_4:45224274-45224293 | None:intergenic | 30.0% | |
| !!! | TTAGTACTCGAAGTTTTGAA+AGG | + | chr5_4:45224350-45224369 | None:intergenic | 30.0% |
| TTCAAAACTTCGAGTACTAA+CGG | - | chr5_4:45224350-45224369 | Msa0853380:intron | 30.0% | |
| ! | ATATGCTTCTAAAAGAGTAG+AGG | - | chr5_4:45224463-45224482 | Msa0853380:intron | 30.0% |
| AACGAAAATAAGGGTTGTTT+GGG | + | chr5_4:45224508-45224527 | None:intergenic | 30.0% | |
| ! | CGATTTTGCAACGAAAATAA+GGG | + | chr5_4:45224517-45224536 | None:intergenic | 30.0% |
| ! | ACGATTTTGCAACGAAAATA+AGG | + | chr5_4:45224518-45224537 | None:intergenic | 30.0% |
| ! | TGGAGCTTTATAGGAATATT+TGG | + | chr5_4:45224671-45224690 | None:intergenic | 30.0% |
| !!! | TGAGAATTTTGGAGCTTTAT+AGG | + | chr5_4:45224680-45224699 | None:intergenic | 30.0% |
| ATAAAGCTCCAAAATTCTCA+TGG | - | chr5_4:45224680-45224699 | Msa0853380:intron | 30.0% | |
| ! | GGGGATTTTCTATATTTCAA+AGG | - | chr5_4:45224765-45224784 | Msa0853380:intron | 30.0% |
| ! | GACATATTTGGAATGAGATG+AGG | - | chr5_4:45223314-45223333 | Msa0853380:CDS | 35.0% |
| ! | GACCAAAAGTGATTTGTGTT+TGG | + | chr5_4:45223685-45223704 | None:intergenic | 35.0% |
| ! | ACTCTAAAAGCAACTTAGAG+TGG | - | chr5_4:45223823-45223842 | Msa0853380:intron | 35.0% |
| CAGTTACTCTCATCAAGAAA+GGG | + | chr5_4:45223985-45224004 | None:intergenic | 35.0% | |
| TCAGTTACTCTCATCAAGAA+AGG | + | chr5_4:45223986-45224005 | None:intergenic | 35.0% | |
| TAGGACCAAACTTCAAAAGA+CGG | + | chr5_4:45224037-45224056 | None:intergenic | 35.0% | |
| TGGTCCTATAGTATAGTGAA+TGG | - | chr5_4:45224049-45224068 | Msa0853380:intron | 35.0% | |
| CACACCATTCACTATACTAT+AGG | + | chr5_4:45224056-45224075 | None:intergenic | 35.0% | |
| !!! | TTGGACCTTTTTCTAGAACT+AGG | + | chr5_4:45224395-45224414 | None:intergenic | 35.0% |
| !! | TAGTTCTAGAAAAAGGTCCA+AGG | - | chr5_4:45224394-45224413 | Msa0853380:intron | 35.0% |
| CAACGAAAATAAGGGTTGTT+TGG | + | chr5_4:45224509-45224528 | None:intergenic | 35.0% | |
| ! | TTTTCGTTGCAAAATCGTCA+AGG | - | chr5_4:45224520-45224539 | Msa0853380:intron | 35.0% |
| TTTCGTTGCAAAATCGTCAA+GGG | - | chr5_4:45224521-45224540 | Msa0853380:intron | 35.0% | |
| AATCGTCAAGGGAAAATATG+CGG | - | chr5_4:45224532-45224551 | Msa0853380:intron | 35.0% | |
| ! | ATTGTGACTTTTAGCACAAC+CGG | + | chr5_4:45224845-45224864 | None:intergenic | 35.0% |
| ! | GACATATTTGGAATGAGATG+AGG | - | chr5_4:45223314-45223333 | Msa0853380:CDS | 35.0% |
| ! | GACCAAAAGTGATTTGTGTT+TGG | + | chr5_4:45223685-45223704 | None:intergenic | 35.0% |
| ! | ACTCTAAAAGCAACTTAGAG+TGG | - | chr5_4:45223823-45223842 | Msa0853380:intron | 35.0% |
| CAGTTACTCTCATCAAGAAA+GGG | + | chr5_4:45223985-45224004 | None:intergenic | 35.0% | |
| TCAGTTACTCTCATCAAGAA+AGG | + | chr5_4:45223986-45224005 | None:intergenic | 35.0% | |
| TAGGACCAAACTTCAAAAGA+CGG | + | chr5_4:45224037-45224056 | None:intergenic | 35.0% | |
| TGGTCCTATAGTATAGTGAA+TGG | - | chr5_4:45224049-45224068 | Msa0853380:intron | 35.0% | |
| CACACCATTCACTATACTAT+AGG | + | chr5_4:45224056-45224075 | None:intergenic | 35.0% | |
| !!! | TTGGACCTTTTTCTAGAACT+AGG | + | chr5_4:45224395-45224414 | None:intergenic | 35.0% |
| !! | TAGTTCTAGAAAAAGGTCCA+AGG | - | chr5_4:45224394-45224413 | Msa0853380:intron | 35.0% |
| CAACGAAAATAAGGGTTGTT+TGG | + | chr5_4:45224509-45224528 | None:intergenic | 35.0% | |
| ! | TTTTCGTTGCAAAATCGTCA+AGG | - | chr5_4:45224520-45224539 | Msa0853380:intron | 35.0% |
| TTTCGTTGCAAAATCGTCAA+GGG | - | chr5_4:45224521-45224540 | Msa0853380:intron | 35.0% | |
| AATCGTCAAGGGAAAATATG+CGG | - | chr5_4:45224532-45224551 | Msa0853380:intron | 35.0% | |
| ! | ATTGTGACTTTTAGCACAAC+CGG | + | chr5_4:45224845-45224864 | None:intergenic | 35.0% |
| !! | TCTTTGGAATGAATGGGTGA+GGG | + | chr5_4:45222993-45223012 | None:intergenic | 40.0% |
| !! | TTCTTTGGAATGAATGGGTG+AGG | + | chr5_4:45222994-45223013 | None:intergenic | 40.0% |
| ! | ATGTTTGGTTCCACTTCTAG+AGG | - | chr5_4:45223485-45223504 | Msa0853380:CDS | 40.0% |
| ! | TGTTTGGTTCCACTTCTAGA+GGG | - | chr5_4:45223486-45223505 | Msa0853380:CDS | 40.0% |
| ! | AATTCTAGTCCCTCTAGAAG+TGG | + | chr5_4:45223498-45223517 | None:intergenic | 40.0% |
| ! | AGAGGGACTAGAATTGATTC+TGG | - | chr5_4:45223503-45223522 | Msa0853380:CDS | 40.0% |
| CTTCTGATACAACGTGAGTT+TGG | + | chr5_4:45223763-45223782 | None:intergenic | 40.0% | |
| !!! | ATGTTTTGACACGTTTGGGT+AGG | + | chr5_4:45223949-45223968 | None:intergenic | 40.0% |
| !!! | GTGCATGTTTTGACACGTTT+GGG | + | chr5_4:45223953-45223972 | None:intergenic | 40.0% |
| !!! | AGTGCATGTTTTGACACGTT+TGG | + | chr5_4:45223954-45223973 | None:intergenic | 40.0% |
| !!! | GTAAGCCGTCTTTTGAAGTT+TGG | - | chr5_4:45224029-45224048 | Msa0853380:intron | 40.0% |
| GCTACAATTACTGTTCCAGA+TGG | - | chr5_4:45224146-45224165 | Msa0853380:intron | 40.0% | |
| ! | ACTGCTCTCCATGAGAATTT+TGG | + | chr5_4:45224691-45224710 | None:intergenic | 40.0% |
| AAAATTCTCATGGAGAGCAG+TGG | - | chr5_4:45224690-45224709 | Msa0853380:intron | 40.0% | |
| AAATTCTCATGGAGAGCAGT+GGG | - | chr5_4:45224691-45224710 | Msa0853380:intron | 40.0% | |
| ACCAGCAATGCAAATAGTGA+GGG | - | chr5_4:45224745-45224764 | Msa0853380:intron | 40.0% | |
| CACAATAATCTCCATGTGAC+AGG | + | chr5_4:45224799-45224818 | None:intergenic | 40.0% | |
| !! | TCTTTGGAATGAATGGGTGA+GGG | + | chr5_4:45222993-45223012 | None:intergenic | 40.0% |
| !! | TTCTTTGGAATGAATGGGTG+AGG | + | chr5_4:45222994-45223013 | None:intergenic | 40.0% |
| ! | ATGTTTGGTTCCACTTCTAG+AGG | - | chr5_4:45223485-45223504 | Msa0853380:CDS | 40.0% |
| ! | TGTTTGGTTCCACTTCTAGA+GGG | - | chr5_4:45223486-45223505 | Msa0853380:CDS | 40.0% |
| ! | AATTCTAGTCCCTCTAGAAG+TGG | + | chr5_4:45223498-45223517 | None:intergenic | 40.0% |
| ! | AGAGGGACTAGAATTGATTC+TGG | - | chr5_4:45223503-45223522 | Msa0853380:CDS | 40.0% |
| CTTCTGATACAACGTGAGTT+TGG | + | chr5_4:45223763-45223782 | None:intergenic | 40.0% | |
| !!! | ATGTTTTGACACGTTTGGGT+AGG | + | chr5_4:45223949-45223968 | None:intergenic | 40.0% |
| !!! | GTGCATGTTTTGACACGTTT+GGG | + | chr5_4:45223953-45223972 | None:intergenic | 40.0% |
| !!! | AGTGCATGTTTTGACACGTT+TGG | + | chr5_4:45223954-45223973 | None:intergenic | 40.0% |
| !!! | GTAAGCCGTCTTTTGAAGTT+TGG | - | chr5_4:45224029-45224048 | Msa0853380:intron | 40.0% |
| GCTACAATTACTGTTCCAGA+TGG | - | chr5_4:45224146-45224165 | Msa0853380:intron | 40.0% | |
| ! | ACTGCTCTCCATGAGAATTT+TGG | + | chr5_4:45224691-45224710 | None:intergenic | 40.0% |
| AAAATTCTCATGGAGAGCAG+TGG | - | chr5_4:45224690-45224709 | Msa0853380:intron | 40.0% | |
| AAATTCTCATGGAGAGCAGT+GGG | - | chr5_4:45224691-45224710 | Msa0853380:intron | 40.0% | |
| ACCAGCAATGCAAATAGTGA+GGG | - | chr5_4:45224745-45224764 | Msa0853380:intron | 40.0% | |
| CACAATAATCTCCATGTGAC+AGG | + | chr5_4:45224799-45224818 | None:intergenic | 40.0% | |
| ATGAATGGGTGAGGGAAGTA+TGG | + | chr5_4:45222985-45223004 | None:intergenic | 45.0% | |
| ACAACGTGAGTTTGGTTGTG+TGG | + | chr5_4:45223755-45223774 | None:intergenic | 45.0% | |
| ! | ATTTTCCAGACACGACCATC+TGG | + | chr5_4:45224164-45224183 | None:intergenic | 45.0% |
| AGATGGTCGTGTCTGGAAAA+TGG | - | chr5_4:45224163-45224182 | Msa0853380:intron | 45.0% | |
| CCTCTCACATGTTTCAACCT+TGG | + | chr5_4:45224414-45224433 | None:intergenic | 45.0% | |
| CCAAGGTTGAAACATGTGAG+AGG | - | chr5_4:45224411-45224430 | Msa0853380:intron | 45.0% | |
| ! | TTGAAACATGTGAGAGGCGT+GGG | - | chr5_4:45224417-45224436 | Msa0853380:intron | 45.0% |
| !! | GTTGTTTGGGTTGAGTTCCT+TGG | + | chr5_4:45224495-45224514 | None:intergenic | 45.0% |
| CACCAGCAATGCAAATAGTG+AGG | - | chr5_4:45224744-45224763 | Msa0853380:intron | 45.0% | |
| CCAGCAATGCAAATAGTGAG+GGG | - | chr5_4:45224746-45224765 | Msa0853380:intron | 45.0% | |
| GTGTGTTTGAGCTGATCAAG+AGG | - | chr5_4:45224816-45224835 | Msa0853380:CDS | 45.0% | |
| TGTTTGAGCTGATCAAGAGG+AGG | - | chr5_4:45224819-45224838 | Msa0853380:CDS | 45.0% | |
| ATGAATGGGTGAGGGAAGTA+TGG | + | chr5_4:45222985-45223004 | None:intergenic | 45.0% | |
| ACAACGTGAGTTTGGTTGTG+TGG | + | chr5_4:45223755-45223774 | None:intergenic | 45.0% | |
| ! | ATTTTCCAGACACGACCATC+TGG | + | chr5_4:45224164-45224183 | None:intergenic | 45.0% |
| AGATGGTCGTGTCTGGAAAA+TGG | - | chr5_4:45224163-45224182 | Msa0853380:intron | 45.0% | |
| CCTCTCACATGTTTCAACCT+TGG | + | chr5_4:45224414-45224433 | None:intergenic | 45.0% | |
| CCAAGGTTGAAACATGTGAG+AGG | - | chr5_4:45224411-45224430 | Msa0853380:intron | 45.0% | |
| ! | TTGAAACATGTGAGAGGCGT+GGG | - | chr5_4:45224417-45224436 | Msa0853380:intron | 45.0% |
| !! | GTTGTTTGGGTTGAGTTCCT+TGG | + | chr5_4:45224495-45224514 | None:intergenic | 45.0% |
| CACCAGCAATGCAAATAGTG+AGG | - | chr5_4:45224744-45224763 | Msa0853380:intron | 45.0% | |
| CCAGCAATGCAAATAGTGAG+GGG | - | chr5_4:45224746-45224765 | Msa0853380:intron | 45.0% | |
| GTGTGTTTGAGCTGATCAAG+AGG | - | chr5_4:45224816-45224835 | Msa0853380:CDS | 45.0% | |
| TGTTTGAGCTGATCAAGAGG+AGG | - | chr5_4:45224819-45224838 | Msa0853380:CDS | 45.0% | |
| ACGTGAGTTTGGTTGTGTGG+TGG | + | chr5_4:45223752-45223771 | None:intergenic | 50.0% | |
| GTTGAAACATGTGAGAGGCG+TGG | - | chr5_4:45224416-45224435 | Msa0853380:intron | 50.0% | |
| ! | ATGTGAGAGGCGTGGGAAAA+AGG | - | chr5_4:45224424-45224443 | Msa0853380:intron | 50.0% |
| AAGAGTAGAGGATGCTGCCA+AGG | - | chr5_4:45224475-45224494 | Msa0853380:intron | 50.0% | |
| CCCCTCACTATTTGCATTGC+TGG | + | chr5_4:45224749-45224768 | None:intergenic | 50.0% | |
| AGGGACAACAACCTGTCACA+TGG | - | chr5_4:45224785-45224804 | Msa0853380:intron | 50.0% | |
| ACGTGAGTTTGGTTGTGTGG+TGG | + | chr5_4:45223752-45223771 | None:intergenic | 50.0% | |
| GTTGAAACATGTGAGAGGCG+TGG | - | chr5_4:45224416-45224435 | Msa0853380:intron | 50.0% | |
| ! | ATGTGAGAGGCGTGGGAAAA+AGG | - | chr5_4:45224424-45224443 | Msa0853380:intron | 50.0% |
| AAGAGTAGAGGATGCTGCCA+AGG | - | chr5_4:45224475-45224494 | Msa0853380:intron | 50.0% | |
| CCCCTCACTATTTGCATTGC+TGG | + | chr5_4:45224749-45224768 | None:intergenic | 50.0% | |
| AGGGACAACAACCTGTCACA+TGG | - | chr5_4:45224785-45224804 | Msa0853380:intron | 50.0% | |
| ATGTCCGGACACACTTTCGC+CGG | + | chr5_4:45222926-45222945 | None:intergenic | 55.0% | |
| GTGTGTCCGGACATCATCAC+CGG | - | chr5_4:45222932-45222951 | Msa0853380:CDS | 55.0% | |
| ! | CCTTCTCCGGTGATGATGTC+CGG | + | chr5_4:45222941-45222960 | None:intergenic | 55.0% |
| CTGTTCCAGATGGTCGTGTC+TGG | - | chr5_4:45224156-45224175 | Msa0853380:intron | 55.0% | |
| GGAGAGCAGTGGGTAGTGTT+TGG | - | chr5_4:45224701-45224720 | Msa0853380:intron | 55.0% | |
| TGAGCTGATCAAGAGGAGGC+CGG | - | chr5_4:45224823-45224842 | Msa0853380:CDS | 55.0% | |
| ATGTCCGGACACACTTTCGC+CGG | + | chr5_4:45222926-45222945 | None:intergenic | 55.0% | |
| GTGTGTCCGGACATCATCAC+CGG | - | chr5_4:45222932-45222951 | Msa0853380:CDS | 55.0% | |
| ! | CCTTCTCCGGTGATGATGTC+CGG | + | chr5_4:45222941-45222960 | None:intergenic | 55.0% |
| CTGTTCCAGATGGTCGTGTC+TGG | - | chr5_4:45224156-45224175 | Msa0853380:intron | 55.0% | |
| GGAGAGCAGTGGGTAGTGTT+TGG | - | chr5_4:45224701-45224720 | Msa0853380:intron | 55.0% | |
| TGAGCTGATCAAGAGGAGGC+CGG | - | chr5_4:45224823-45224842 | Msa0853380:CDS | 55.0% | |
| CCGGACATCATCACCGGAGA+AGG | - | chr5_4:45222938-45222957 | Msa0853380:CDS | 60.0% | |
| CCGGACATCATCACCGGAGA+AGG | - | chr5_4:45222938-45222957 | Msa0853380:CDS | 60.0% | |
| ! | CTCGCCGGCGAAAGTGTGTC+CGG | - | chr5_4:45222919-45222938 | Msa0853380:CDS | 65.0% |
| ! | CTCGCCGGCGAAAGTGTGTC+CGG | - | chr5_4:45222919-45222938 | Msa0853380:CDS | 65.0% |
| CGGACACACTTTCGCCGGCG+AGG | + | chr5_4:45222921-45222940 | None:intergenic | 70.0% | |
| CGGACACACTTTCGCCGGCG+AGG | + | chr5_4:45222921-45222940 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 45222912 | 45224892 | 45222912 | ID=Msa0853380;Name=Msa0853380 |
| chr5_4 | mRNA | 45222912 | 45224892 | 45222912 | ID=Msa0853380-mRNA-1;Parent=Msa0853380;Name=Msa0853380-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|3|0|274 |
| chr5_4 | exon | 45224788 | 45224892 | 45224788 | ID=Msa0853380-mRNA-1:exon:14269;Parent=Msa0853380-mRNA-1 |
| chr5_4 | exon | 45223251 | 45223709 | 45223251 | ID=Msa0853380-mRNA-1:exon:14268;Parent=Msa0853380-mRNA-1 |
| chr5_4 | exon | 45222912 | 45223172 | 45222912 | ID=Msa0853380-mRNA-1:exon:14267;Parent=Msa0853380-mRNA-1 |
| chr5_4 | CDS | 45224788 | 45224892 | 45224788 | ID=Msa0853380-mRNA-1:cds;Parent=Msa0853380-mRNA-1 |
| chr5_4 | CDS | 45223251 | 45223709 | 45223251 | ID=Msa0853380-mRNA-1:cds;Parent=Msa0853380-mRNA-1 |
| chr5_4 | CDS | 45222912 | 45223172 | 45222912 | ID=Msa0853380-mRNA-1:cds;Parent=Msa0853380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
