Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0853750 | XP_024640704.2 | 87.660 | 1175 | 39 | 3 | 1 | 1100 | 1 | 1144 | 0.0 | 2026 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0853750 | sp|F4IXE7|IDM1_ARATH | 36.983 | 411 | 251 | 6 | 646 | 1052 | 576 | 982 | 2.26e-75 | 275 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0853750 | G7JZJ8 | 87.660 | 1175 | 39 | 3 | 1 | 1100 | 1 | 1144 | 0.0 | 2026 |
Gene ID | Type | Classification |
---|---|---|
Msa0853750 | TR | PHD |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0853750 | MtrunA17_Chr5g0430361 | 92.960 | 1037 | 50 | 2 | 60 | 1074 | 2 | 1037 | 0.0 | 1956 |
Msa0853750 | MtrunA17_Chr3g0105291 | 45.532 | 1052 | 450 | 21 | 62 | 1074 | 21 | 988 | 0.0 | 858 |
Msa0853750 | MtrunA17_Chr7g0270101 | 45.213 | 376 | 188 | 8 | 687 | 1054 | 383 | 748 | 2.09e-96 | 324 |
Msa0853750 | MtrunA17_Chr5g0407211 | 43.112 | 392 | 184 | 9 | 688 | 1054 | 3 | 380 | 6.11e-96 | 311 |
Msa0853750 | MtrunA17_Chr5g0407251 | 42.857 | 392 | 185 | 9 | 688 | 1054 | 3 | 380 | 2.52e-95 | 310 |
Msa0853750 | MtrunA17_Chr3g0134821 | 39.211 | 431 | 225 | 10 | 646 | 1054 | 378 | 793 | 5.34e-85 | 294 |
Msa0853750 | MtrunA17_Chr3g0134811 | 35.435 | 460 | 221 | 9 | 657 | 1054 | 307 | 752 | 7.24e-84 | 290 |
Msa0853750 | MtrunA17_Chr4g0012501 | 57.399 | 223 | 86 | 4 | 65 | 284 | 33 | 249 | 5.54e-81 | 265 |
Msa0853750 | MtrunA17_Chr2g0316251 | 39.628 | 376 | 218 | 8 | 682 | 1053 | 756 | 1126 | 4.71e-75 | 272 |
Msa0853750 | MtrunA17_Chr1g0185491 | 37.598 | 383 | 220 | 10 | 682 | 1053 | 806 | 1180 | 4.75e-70 | 257 |
Msa0853750 | MtrunA17_Chr1g0205451 | 34.783 | 460 | 267 | 10 | 599 | 1051 | 537 | 970 | 7.85e-68 | 250 |
Msa0853750 | MtrunA17_Chr7g0259981 | 34.307 | 274 | 147 | 8 | 782 | 1051 | 6 | 250 | 2.14e-47 | 172 |
Msa0853750 | MtrunA17_Chr1g0182481 | 30.053 | 376 | 199 | 9 | 725 | 1054 | 496 | 853 | 4.68e-43 | 170 |
Msa0853750 | MtrunA17_Chr7g0265211 | 28.362 | 409 | 209 | 9 | 711 | 1054 | 517 | 906 | 7.98e-40 | 160 |
Msa0853750 | MtrunA17_Chr1g0179841 | 28.856 | 402 | 204 | 11 | 717 | 1054 | 378 | 761 | 1.85e-35 | 145 |
Msa0853750 | MtrunA17_Chr3g0134851 | 32.386 | 352 | 158 | 11 | 728 | 1054 | 129 | 425 | 4.30e-31 | 128 |
Msa0853750 | MtrunA17_Chr4g0055731 | 27.179 | 390 | 217 | 16 | 686 | 1065 | 109 | 441 | 1.61e-27 | 117 |
Msa0853750 | MtrunA17_Chr4g0028111 | 24.282 | 383 | 203 | 9 | 738 | 1054 | 187 | 548 | 6.16e-26 | 114 |
Msa0853750 | MtrunA17_Chr4g0027811 | 24.147 | 381 | 178 | 10 | 721 | 1051 | 216 | 535 | 2.40e-23 | 106 |
Msa0853750 | MtrunA17_Chr2g0320451 | 26.236 | 263 | 129 | 6 | 725 | 937 | 500 | 747 | 4.91e-19 | 93.6 |
Msa0853750 | MtrunA17_Chr2g0320451 | 29.670 | 182 | 108 | 4 | 876 | 1051 | 813 | 980 | 7.76e-15 | 79.7 |
Msa0853750 | MtrunA17_Chr4g0025251 | 25.641 | 234 | 146 | 5 | 854 | 1062 | 449 | 679 | 5.91e-18 | 89.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0853750 | AT5G58610.5 | 37.561 | 1025 | 542 | 28 | 50 | 1052 | 10 | 958 | 0.0 | 608 |
Msa0853750 | AT5G58610.7 | 37.561 | 1025 | 542 | 28 | 50 | 1052 | 10 | 958 | 0.0 | 607 |
Msa0853750 | AT5G58610.3 | 37.648 | 1012 | 535 | 27 | 61 | 1052 | 32 | 967 | 0.0 | 607 |
Msa0853750 | AT5G58610.8 | 37.648 | 1012 | 535 | 27 | 61 | 1052 | 32 | 967 | 0.0 | 607 |
Msa0853750 | AT5G58610.2 | 37.648 | 1012 | 535 | 27 | 61 | 1052 | 32 | 967 | 0.0 | 607 |
Msa0853750 | AT5G58610.9 | 36.785 | 1014 | 543 | 28 | 50 | 1041 | 10 | 947 | 0.0 | 585 |
Msa0853750 | AT5G58610.10 | 36.863 | 1001 | 536 | 27 | 61 | 1041 | 32 | 956 | 0.0 | 584 |
Msa0853750 | AT5G58610.6 | 36.683 | 1025 | 525 | 30 | 50 | 1052 | 10 | 932 | 0.0 | 574 |
Msa0853750 | AT5G58610.1 | 36.683 | 1025 | 525 | 30 | 50 | 1052 | 10 | 932 | 0.0 | 573 |
Msa0853750 | AT5G58610.11 | 35.861 | 976 | 528 | 28 | 50 | 1003 | 10 | 909 | 1.58e-173 | 533 |
Msa0853750 | AT5G58610.4 | 50.238 | 420 | 197 | 6 | 643 | 1052 | 319 | 736 | 1.72e-126 | 408 |
Msa0853750 | AT1G05380.3 | 39.257 | 377 | 219 | 7 | 682 | 1053 | 514 | 885 | 4.49e-77 | 276 |
Msa0853750 | AT1G05380.1 | 39.257 | 377 | 219 | 7 | 682 | 1053 | 514 | 885 | 4.49e-77 | 276 |
Msa0853750 | AT1G05380.2 | 39.257 | 377 | 219 | 7 | 682 | 1053 | 514 | 885 | 4.49e-77 | 276 |
Msa0853750 | AT3G14980.3 | 36.983 | 411 | 251 | 6 | 646 | 1052 | 576 | 982 | 5.36e-77 | 275 |
Msa0853750 | AT3G14980.5 | 36.983 | 411 | 251 | 6 | 646 | 1052 | 531 | 937 | 1.03e-76 | 275 |
Msa0853750 | AT3G14980.6 | 36.983 | 411 | 251 | 6 | 646 | 1052 | 576 | 982 | 2.30e-76 | 275 |
Msa0853750 | AT3G14980.1 | 36.983 | 411 | 251 | 6 | 646 | 1052 | 576 | 982 | 2.30e-76 | 275 |
Msa0853750 | AT3G14980.2 | 36.983 | 411 | 251 | 6 | 646 | 1052 | 576 | 982 | 2.30e-76 | 275 |
Msa0853750 | AT5G36740.5 | 32.819 | 518 | 315 | 16 | 561 | 1053 | 400 | 909 | 3.33e-72 | 262 |
Msa0853750 | AT5G36740.1 | 32.819 | 518 | 315 | 16 | 561 | 1053 | 400 | 909 | 3.33e-72 | 262 |
Msa0853750 | AT5G36740.4 | 32.008 | 528 | 316 | 17 | 561 | 1053 | 247 | 766 | 1.22e-68 | 250 |
Msa0853750 | AT5G36670.2 | 32.200 | 500 | 306 | 16 | 561 | 1035 | 400 | 891 | 4.94e-67 | 244 |
Msa0853750 | AT5G36740.2 | 32.200 | 500 | 306 | 16 | 561 | 1035 | 400 | 891 | 4.94e-67 | 244 |
Msa0853750 | AT5G36740.3 | 32.200 | 500 | 306 | 16 | 561 | 1035 | 400 | 891 | 4.94e-67 | 244 |
Msa0853750 | AT5G36670.4 | 32.200 | 500 | 306 | 16 | 561 | 1035 | 400 | 891 | 2.23e-66 | 245 |
Msa0853750 | AT5G36670.5 | 32.200 | 500 | 306 | 16 | 561 | 1035 | 400 | 891 | 2.23e-66 | 245 |
Msa0853750 | AT4G14920.3 | 36.828 | 372 | 225 | 7 | 686 | 1053 | 578 | 943 | 3.34e-66 | 244 |
Msa0853750 | AT4G14920.2 | 36.828 | 372 | 225 | 7 | 686 | 1053 | 578 | 943 | 3.54e-66 | 244 |
Msa0853750 | AT4G14920.1 | 36.828 | 372 | 225 | 7 | 686 | 1053 | 578 | 943 | 3.54e-66 | 244 |
Msa0853750 | AT5G36670.3 | 31.373 | 510 | 307 | 17 | 561 | 1035 | 247 | 748 | 1.01e-62 | 233 |
Msa0853750 | AT5G36670.1 | 31.373 | 510 | 307 | 17 | 561 | 1035 | 400 | 901 | 1.87e-62 | 233 |
Msa0853750 | AT3G14980.4 | 34.986 | 363 | 228 | 6 | 646 | 1004 | 576 | 934 | 1.80e-60 | 224 |
Msa0853750 | AT5G63900.1 | 44.404 | 277 | 132 | 10 | 793 | 1065 | 255 | 513 | 1.41e-57 | 209 |
Msa0853750 | AT2G37520.1 | 27.593 | 482 | 268 | 11 | 629 | 1051 | 313 | 772 | 2.79e-41 | 164 |
Msa0853750 | AT2G36720.1 | 26.540 | 422 | 209 | 10 | 725 | 1076 | 557 | 947 | 8.43e-38 | 154 |
Msa0853750 | AT2G36720.2 | 26.540 | 422 | 209 | 10 | 725 | 1076 | 557 | 947 | 8.43e-38 | 154 |
Msa0853750 | AT3G53680.1 | 27.390 | 387 | 212 | 9 | 717 | 1051 | 419 | 788 | 7.92e-37 | 150 |
Msa0853750 | AT3G53680.2 | 27.390 | 387 | 212 | 9 | 717 | 1051 | 421 | 790 | 8.86e-37 | 150 |
Msa0853750 | AT2G27980.1 | 24.905 | 526 | 304 | 13 | 594 | 1051 | 512 | 1014 | 3.94e-36 | 149 |
Find 246 sgRNAs with CRISPR-Local
Find 430 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGGCTTTCCTAATAGATTT+TGG | 0.119198 | 5_4:-45693734 | None:intergenic |
TTGAAGTCCTTGTGCGTTTA+TGG | 0.125430 | 5_4:-45692282 | None:intergenic |
TCATAAGAATTGTCTTAATT+TGG | 0.158903 | 5_4:+45692798 | Msa0853750:CDS |
CGTCGAAACCTTGGCTCATT+TGG | 0.190062 | 5_4:-45691862 | None:intergenic |
TTCCAAAGGCTTCCAAATTA+TGG | 0.219352 | 5_4:-45691531 | None:intergenic |
TAAATTGTTTGGAATGTTTA+AGG | 0.220624 | 5_4:-45691189 | None:intergenic |
CAAAAGGGTGCAGAAGGTTT+TGG | 0.232594 | 5_4:+45692363 | Msa0853750:CDS |
TTCATTTCATCACCTAAATC+TGG | 0.258138 | 5_4:-45690885 | None:intergenic |
GAACTTGTTGTTGAGGTAAT+TGG | 0.264587 | 5_4:+45691128 | Msa0853750:CDS |
GTCGAAACCTTGGCTCATTT+GGG | 0.280490 | 5_4:-45691861 | None:intergenic |
GGTTCAACTTGAAATTTAAC+TGG | 0.282801 | 5_4:-45691911 | None:intergenic |
AGAAAACATCTTGTTTATCT+TGG | 0.286222 | 5_4:+45691647 | Msa0853750:CDS |
GGATAACTCGCGAAGGAATT+AGG | 0.287893 | 5_4:+45692509 | Msa0853750:CDS |
AGCATATTCTTCCCAGATTT+AGG | 0.288962 | 5_4:+45690873 | Msa0853750:CDS |
GACGTTCTAAGTCCATAATT+TGG | 0.302733 | 5_4:+45691519 | Msa0853750:CDS |
ACGGGGCTCCAAAATCTATT+AGG | 0.304902 | 5_4:+45693726 | Msa0853750:CDS |
GGTGGATGTTTCTAATGTTT+TGG | 0.305903 | 5_4:+45690668 | Msa0853750:CDS |
TCCAATTGAGTTACGGATAA+AGG | 0.306009 | 5_4:+45690758 | Msa0853750:CDS |
TTTGTCCATCGTGCCGTTGC+GGG | 0.319076 | 5_4:+45692985 | Msa0853750:CDS |
GTCCATAATTTGGAAGCCTT+TGG | 0.322129 | 5_4:+45691529 | Msa0853750:CDS |
GCTTGATCCACTTCAGATAC+TGG | 0.326871 | 5_4:-45695873 | None:intergenic |
AACAGATTTGGTATGATATT+AGG | 0.340134 | 5_4:+45691042 | Msa0853750:CDS |
ATTACAAGTCCATTCTCTAA+TGG | 0.340868 | 5_4:-45691087 | None:intergenic |
CTAGTCTTGCCTGCTGTTCC+CGG | 0.346824 | 5_4:+45695415 | Msa0853750:CDS |
GTGATAATGGAAATCGAAAA+AGG | 0.351320 | 5_4:+45689920 | Msa0853750:CDS |
TCCTTTATCCGTAACTCAAT+TGG | 0.356636 | 5_4:-45690759 | None:intergenic |
CGGATAAAGGATCTTCCATT+TGG | 0.359722 | 5_4:+45690771 | Msa0853750:CDS |
CGCCGACTCCTCAAACTTGT+TGG | 0.370823 | 5_4:+45691319 | Msa0853750:CDS |
TCATCAGAAGCTAAAGCAAC+TGG | 0.372787 | 5_4:+45695381 | Msa0853750:intron |
ACGACTCCAAAACAACAAAA+TGG | 0.373752 | 5_4:+45695807 | Msa0853750:CDS |
CCTGAATTACGTACTATAGA+TGG | 0.373818 | 5_4:+45692235 | Msa0853750:CDS |
CCATCTATAGTACGTAATTC+AGG | 0.376584 | 5_4:-45692235 | None:intergenic |
GCTAATCAAGGTGATGCATT+TGG | 0.389927 | 5_4:+45691260 | Msa0853750:CDS |
ACCTGTTGTCAGAATCTATA+TGG | 0.390234 | 5_4:+45692535 | Msa0853750:CDS |
TCTCCTTCGAGTAAATTGTT+TGG | 0.391865 | 5_4:-45691200 | None:intergenic |
GAATGATGGATCTACAAGTT+TGG | 0.392714 | 5_4:+45695916 | Msa0853750:CDS |
GATGGTGATAAGAGTGATAA+TGG | 0.395193 | 5_4:+45689907 | Msa0853750:CDS |
CAAATTCCACATCCACCATT+TGG | 0.395390 | 5_4:-45691442 | None:intergenic |
ATTGGTTACCAAGAGGGAAA+TGG | 0.396210 | 5_4:+45690961 | Msa0853750:CDS |
AACTTTGGATTAAGTTTATC+CGG | 0.400564 | 5_4:-45691731 | None:intergenic |
CGTAGGAGAGTTTCCTCCTT+CGG | 0.403737 | 5_4:-45692476 | None:intergenic |
AAAATCGAAGTGTAAAACTT+TGG | 0.406804 | 5_4:-45691746 | None:intergenic |
CAGTAAAAGACCTTGTACTT+TGG | 0.409730 | 5_4:-45692448 | None:intergenic |
GGTGGCCCAGAGTTCATGTT+AGG | 0.410490 | 5_4:-45691797 | None:intergenic |
ATGTAGGAGCAAGACGGTTC+GGG | 0.411437 | 5_4:+45691604 | Msa0853750:CDS |
AAGTCGTCTGTACTGAAATC+TGG | 0.412571 | 5_4:-45695051 | None:intergenic |
ATGGCAAGAGGACAAAATTC+TGG | 0.415798 | 5_4:-45691932 | None:intergenic |
TATGATACGCCGAGGGGCAT+TGG | 0.416757 | 5_4:-45692780 | None:intergenic |
CAGCACAAGCATCATTCCTT+TGG | 0.417068 | 5_4:+45691361 | Msa0853750:CDS |
TGGTTTCTCTTTGCAGTTGG+TGG | 0.417605 | 5_4:-45692262 | None:intergenic |
GGGATGAATCAACTGAGAAT+TGG | 0.419006 | 5_4:+45690943 | Msa0853750:CDS |
AACATCTTGTTTATCTTGGA+TGG | 0.419268 | 5_4:+45691651 | Msa0853750:CDS |
GCTCAATCGACTAAACTTCC+AGG | 0.421981 | 5_4:+45694823 | Msa0853750:CDS |
TGCTAGAGAAAGGGTTATGC+AGG | 0.423833 | 5_4:-45693908 | None:intergenic |
GATGTAGGAGCAAGACGGTT+CGG | 0.425946 | 5_4:+45691603 | Msa0853750:CDS |
ATGATCAGAATTAGTCCATT+CGG | 0.427068 | 5_4:-45692161 | None:intergenic |
ATCAGTAACCAACAAGTTTG+AGG | 0.429317 | 5_4:-45691327 | None:intergenic |
CAGTCTCGGTGAAACAGATT+TGG | 0.429902 | 5_4:+45691030 | Msa0853750:CDS |
TTGGTTACCAAGAGGGAAAT+GGG | 0.430226 | 5_4:+45690962 | Msa0853750:CDS |
AGGGCATCCCTGATGGTGAT+TGG | 0.430704 | 5_4:+45692961 | Msa0853750:intron |
CATGTTGAGTGCCTCCAAAA+TGG | 0.432662 | 5_4:+45693198 | Msa0853750:CDS |
ATCTTGGATGGACAATTGAA+TGG | 0.433717 | 5_4:+45691663 | Msa0853750:CDS |
ATTTGTTCTGTTTGTAACTA+CGG | 0.435651 | 5_4:+45692736 | Msa0853750:CDS |
GTAGTCTTCCTTCTCTCAGT+TGG | 0.436093 | 5_4:-45692061 | None:intergenic |
TGATCAGAATTAGTCCATTC+GGG | 0.436276 | 5_4:-45692160 | None:intergenic |
GAGGCGGTAACGGTCTAATC+AGG | 0.443329 | 5_4:-45690737 | None:intergenic |
AACTCAATTGGAGGCGGTAA+CGG | 0.443516 | 5_4:-45690747 | None:intergenic |
ATGTGTTGATGTGAAATATC+AGG | 0.443715 | 5_4:+45690797 | Msa0853750:CDS |
TTTAACTGGAGAAGGTTCAT+TGG | 0.444310 | 5_4:-45691897 | None:intergenic |
GGAAACTCTCCTACGTTTGA+AGG | 0.447090 | 5_4:+45692484 | Msa0853750:CDS |
ACATCAACACATTGTCCAAA+TGG | 0.448928 | 5_4:-45690786 | None:intergenic |
GGGTGCTAAGATCAAGCAAA+AGG | 0.450875 | 5_4:+45692347 | Msa0853750:CDS |
TCTCCACAAGATCAGTGTTT+AGG | 0.452938 | 5_4:+45692094 | Msa0853750:CDS |
TCACAGGACAAGAGAAATTA+CGG | 0.454583 | 5_4:+45692672 | Msa0853750:CDS |
GCATCATTCCTTTGGTGGAT+GGG | 0.455178 | 5_4:+45691369 | Msa0853750:CDS |
AACTCTGAGACTTGCGGTGT+TGG | 0.458418 | 5_4:+45693804 | Msa0853750:CDS |
CGATCGCTGCGATGGAATGA+AGG | 0.459419 | 5_4:+45690845 | Msa0853750:CDS |
GAAGCTAAAGCAACTGGGAG+TGG | 0.459529 | 5_4:+45695387 | Msa0853750:intron |
TAGTCTTCCTTCTCTCAGTT+GGG | 0.460882 | 5_4:-45692060 | None:intergenic |
AGCCTCAAAATATTCTGTCT+TGG | 0.464847 | 5_4:+45692401 | Msa0853750:CDS |
CAGTTGAGGAGTTTGGAAGA+TGG | 0.465345 | 5_4:+45690534 | Msa0853750:CDS |
TCCATATAGATTCTGACAAC+AGG | 0.467354 | 5_4:-45692536 | None:intergenic |
CAAACTGAGTGTTGCACTCT+CGG | 0.468934 | 5_4:+45693863 | Msa0853750:CDS |
CCGCACAATGATCTGTTTGA+AGG | 0.470390 | 5_4:+45692700 | Msa0853750:CDS |
GGACAAAACCAATCACCATC+AGG | 0.470956 | 5_4:-45692969 | None:intergenic |
TAAGAGAAAGTGGAAATTGA+AGG | 0.472614 | 5_4:+45691997 | Msa0853750:CDS |
TCGTGCCGTTGCGGGATTTG+CGG | 0.472715 | 5_4:+45692993 | Msa0853750:CDS |
TTATGGTTTCTCTTTGCAGT+TGG | 0.473232 | 5_4:-45692265 | None:intergenic |
TTTCTGGGATCATGGCATCC+AGG | 0.474048 | 5_4:+45690558 | Msa0853750:CDS |
TTGTTTGGAATGTTTAAGGC+AGG | 0.474457 | 5_4:-45691185 | None:intergenic |
CATCATTCCTTTGGTGGATG+GGG | 0.477185 | 5_4:+45691370 | Msa0853750:CDS |
TCTTCATCTGCTTTAGATTG+TGG | 0.478088 | 5_4:+45690702 | Msa0853750:CDS |
GTGGATCAAGCAGAAGGGAT+TGG | 0.481108 | 5_4:+45695885 | Msa0853750:CDS |
GCATACTCATCAATAACTTC+AGG | 0.482703 | 5_4:-45691575 | None:intergenic |
CACAAGCATCATTCCTTTGG+TGG | 0.482854 | 5_4:+45691364 | Msa0853750:CDS |
TTGCTGAAACCATTAGAGAA+TGG | 0.483151 | 5_4:+45691078 | Msa0853750:CDS |
GTATGATATTAGGATGAGAA+AGG | 0.485431 | 5_4:+45691052 | Msa0853750:CDS |
AGCATCATTCCTTTGGTGGA+TGG | 0.485615 | 5_4:+45691368 | Msa0853750:CDS |
ACGATATCTCTGCTAGAGAA+AGG | 0.485722 | 5_4:-45693918 | None:intergenic |
TTTCACCGAGACTGCAACAT+AGG | 0.485786 | 5_4:-45691021 | None:intergenic |
GTGATATTCGATCGCTGCGA+TGG | 0.486249 | 5_4:+45690837 | Msa0853750:CDS |
TCTGAGACTTGCGGTGTTGG+TGG | 0.486502 | 5_4:+45693807 | Msa0853750:CDS |
ACTGGAGAAGGTTCATTGGT+TGG | 0.487564 | 5_4:-45691893 | None:intergenic |
AACTGAGGATCACTCAGGAT+TGG | 0.488881 | 5_4:+45690922 | Msa0853750:CDS |
CAATCATCAATGGAGGTTGA+TGG | 0.488960 | 5_4:+45689889 | None:intergenic |
ACTTGAAATTTAACTGGAGA+AGG | 0.489209 | 5_4:-45691905 | None:intergenic |
TTAGGTGATGAAATGAAGGT+TGG | 0.489849 | 5_4:+45690891 | Msa0853750:CDS |
TTCAAAGGCTAGCACACAAA+AGG | 0.490434 | 5_4:+45692300 | Msa0853750:CDS |
CATTGTGTTGCCAAAGTACA+AGG | 0.495043 | 5_4:+45692438 | Msa0853750:CDS |
ACTGAGGATCACTCAGGATT+GGG | 0.495646 | 5_4:+45690923 | Msa0853750:CDS |
CAGTGTTTAGGCACACTTCA+AGG | 0.501569 | 5_4:+45692106 | Msa0853750:CDS |
GGTATCCTATGTTGCAGTCT+CGG | 0.503297 | 5_4:+45691016 | Msa0853750:CDS |
GCAGAAGGGATTGGCAAAAG+AGG | 0.505566 | 5_4:+45695894 | Msa0853750:CDS |
TACCGCCTCCAATTGAGTTA+CGG | 0.506527 | 5_4:+45690751 | Msa0853750:CDS |
AGATTTAGGTGATGAAATGA+AGG | 0.508571 | 5_4:+45690887 | Msa0853750:CDS |
GAGGATCCTAACATGAACTC+TGG | 0.511105 | 5_4:+45691791 | Msa0853750:CDS |
AGCGGCTTTGCAAACCATGC+TGG | 0.514471 | 5_4:+45692562 | Msa0853750:CDS |
TTTATCCGTAACTCAATTGG+AGG | 0.515632 | 5_4:-45690756 | None:intergenic |
GAATGGACTAATTCTGATCA+TGG | 0.516212 | 5_4:+45692163 | Msa0853750:CDS |
TAAGAATTGTCTTAATTTGG+AGG | 0.523841 | 5_4:+45692801 | Msa0853750:CDS |
TCATTTCATCACCTAAATCT+GGG | 0.526675 | 5_4:-45690884 | None:intergenic |
TTCTGGGATCATGGCATCCA+GGG | 0.527252 | 5_4:+45690559 | Msa0853750:CDS |
GATTGGCAAAAGAGGAATGA+TGG | 0.527543 | 5_4:+45695902 | Msa0853750:CDS |
TCTAGCACACCGGGAACAGC+AGG | 0.531932 | 5_4:-45695424 | None:intergenic |
CGATATCTCTGCTAGAGAAA+GGG | 0.534298 | 5_4:-45693917 | None:intergenic |
ATCAAGCAAAAGGGTGCAGA+AGG | 0.536140 | 5_4:+45692357 | Msa0853750:CDS |
TTTAATGGATGAGCTCGAAA+AGG | 0.537315 | 5_4:+45695088 | Msa0853750:CDS |
GAAAGATTGCTGTCAATTTG+AGG | 0.537617 | 5_4:-45691818 | None:intergenic |
AACATCTGTTAGCAGAAGGA+TGG | 0.542192 | 5_4:+45692026 | Msa0853750:CDS |
CTGTGGAGAAGACTGCGAAC+GGG | 0.542726 | 5_4:+45693260 | Msa0853750:CDS |
AACCAACAAGTTTGAGGAGT+CGG | 0.543763 | 5_4:-45691321 | None:intergenic |
GGTGGATGTGGAATTTGATA+AGG | 0.545172 | 5_4:+45691448 | Msa0853750:CDS |
AGATTTCAGTACAGACGACT+TGG | 0.545529 | 5_4:+45695053 | Msa0853750:CDS |
TATCAGGATGCTTGGTGGGA+AGG | 0.546580 | 5_4:+45690813 | Msa0853750:CDS |
ATCAGATTATCTTATTGAAG+TGG | 0.547552 | 5_4:+45690647 | Msa0853750:CDS |
GGACAATCTAACTTGGACAT+TGG | 0.549998 | 5_4:+45693770 | Msa0853750:CDS |
CTGAGAATTGGTTACCAAGA+GGG | 0.550005 | 5_4:+45690955 | Msa0853750:CDS |
GGTGCTAAGATCAAGCAAAA+GGG | 0.550242 | 5_4:+45692348 | Msa0853750:CDS |
GTTTATCCGGAGACTTGTAC+CGG | 0.551483 | 5_4:-45691718 | None:intergenic |
ACTCGGCTGATAAGAGAAAG+TGG | 0.552574 | 5_4:+45691987 | Msa0853750:CDS |
TGGTGCTGAAAGTGACTTAG+TGG | 0.552995 | 5_4:+45693827 | Msa0853750:CDS |
AGTTACTGCTTCCACCAGCA+TGG | 0.554079 | 5_4:-45692576 | None:intergenic |
ACGATACCGGTACAAGTCTC+CGG | 0.556383 | 5_4:+45691712 | Msa0853750:CDS |
AATCTGATTCTTCATCATCA+AGG | 0.558197 | 5_4:-45690632 | None:intergenic |
GAGGACAAACGTCGAAACCT+TGG | 0.561567 | 5_4:-45691871 | None:intergenic |
AAACCTTGGCTCATTTGGGG+TGG | 0.561632 | 5_4:-45691857 | None:intergenic |
ATCCGTAACTCAATTGGAGG+CGG | 0.563021 | 5_4:-45690753 | None:intergenic |
CATGTGTAGGGCATCCCTGA+TGG | 0.563743 | 5_4:+45692954 | Msa0853750:intron |
GTGCCTAAACACTGATCTTG+TGG | 0.566474 | 5_4:-45692097 | None:intergenic |
CTCAATCGACTAAACTTCCA+GGG | 0.567209 | 5_4:+45694824 | Msa0853750:CDS |
TCAACTTCAGACAGTTCCAA+AGG | 0.567236 | 5_4:-45691545 | None:intergenic |
AGATTATCTTATTGAAGTGG+TGG | 0.568142 | 5_4:+45690650 | Msa0853750:CDS |
GCTGCGATGGAATGAAGGAT+AGG | 0.569938 | 5_4:+45690850 | Msa0853750:CDS |
ATACATGCATGTTGTGTGAA+TGG | 0.570842 | 5_4:+45690444 | Msa0853750:CDS |
TCACAATGAACATTATCAGT+TGG | 0.571207 | 5_4:-45691233 | None:intergenic |
GGCTAGTCCAGTATCTGAAG+TGG | 0.575225 | 5_4:+45695866 | Msa0853750:CDS |
CTGGTGGAAGCAGTAACTGC+AGG | 0.579172 | 5_4:+45692581 | Msa0853750:CDS |
GTTGTTTGAGGAGTGTGAGA+GGG | 0.580067 | 5_4:+45690995 | Msa0853750:CDS |
AGGATCCTAACATGAACTCT+GGG | 0.580246 | 5_4:+45691792 | Msa0853750:CDS |
AGTTGTTTGAGGAGTGTGAG+AGG | 0.580570 | 5_4:+45690994 | Msa0853750:CDS |
GAAACTCTCCTACGTTTGAA+GGG | 0.580720 | 5_4:+45692485 | Msa0853750:CDS |
ATTCCAAACAATTTACTCGA+AGG | 0.583182 | 5_4:+45691197 | Msa0853750:CDS |
GAAGTACAGTATAGAAACCC+TGG | 0.584288 | 5_4:-45694841 | None:intergenic |
CATCAGAAGCTAAAGCAACT+GGG | 0.584545 | 5_4:+45695382 | Msa0853750:intron |
GGAGAAGGTTCATTGGTTGG+AGG | 0.585791 | 5_4:-45691890 | None:intergenic |
AAAATTGAAGAGACTGAGGA+TGG | 0.588427 | 5_4:+45693023 | Msa0853750:CDS |
CAAATCCCGCAACGGCACGA+TGG | 0.590373 | 5_4:-45692990 | None:intergenic |
ATGTGAAATATCAGGATGCT+TGG | 0.590726 | 5_4:+45690805 | Msa0853750:CDS |
GTTATTGATGAGTATGCACT+TGG | 0.594005 | 5_4:+45691581 | Msa0853750:CDS |
AGAATGGACTTGTAATGTGA+AGG | 0.594117 | 5_4:+45691094 | Msa0853750:CDS |
TCTTCCTTCTCTCAGTTGGG+TGG | 0.594540 | 5_4:-45692057 | None:intergenic |
GAAATATCAGGATGCTTGGT+GGG | 0.594887 | 5_4:+45690809 | Msa0853750:CDS |
TTTATGCGACCAATGCCCCT+CGG | 0.597093 | 5_4:+45692771 | Msa0853750:CDS |
CTCCTCCACATAGACGATAC+CGG | 0.598432 | 5_4:+45691699 | Msa0853750:CDS |
ATGAGTATGCACTTGGATGT+AGG | 0.598658 | 5_4:+45691588 | Msa0853750:CDS |
TTATAGAAGATTCTTTCAGG+TGG | 0.599056 | 5_4:-45690489 | None:intergenic |
TGAAATATCAGGATGCTTGG+TGG | 0.599189 | 5_4:+45690808 | Msa0853750:CDS |
GGCGAACTTCGCTTAATGTG+AGG | 0.600008 | 5_4:-45691163 | None:intergenic |
GGGAAGTAATGCAAGATCAC+AGG | 0.600203 | 5_4:+45692656 | Msa0853750:CDS |
GCGAACTTCGCTTAATGTGA+GGG | 0.600564 | 5_4:-45691162 | None:intergenic |
AAATGAAGAATTGATTAGTG+TGG | 0.601220 | 5_4:+45694871 | Msa0853750:CDS |
TCTGAAGTGGATCAAGCAGA+AGG | 0.601234 | 5_4:+45695879 | Msa0853750:CDS |
CAGGGAAAATTATCCGCTGT+GGG | 0.601586 | 5_4:+45690577 | Msa0853750:CDS |
TCGAAACCTTGGCTCATTTG+GGG | 0.602622 | 5_4:-45691860 | None:intergenic |
TAGAGAGTGAAGTACTTACC+CGG | 0.604082 | 5_4:+45692326 | Msa0853750:CDS |
TAGTATTTCACGATGGCAAG+AGG | 0.605840 | 5_4:-45691944 | None:intergenic |
TTTCTCTAGCAGAGATATCG+TGG | 0.606383 | 5_4:+45693920 | Msa0853750:CDS |
TCTGTGGAGAAGACTGCGAA+CGG | 0.609350 | 5_4:+45693259 | Msa0853750:CDS |
GGTGGATGGGGAATCTGAGA+AGG | 0.612895 | 5_4:+45691382 | Msa0853750:CDS |
TGTTTGGAATGTTTAAGGCA+GGG | 0.613868 | 5_4:-45691184 | None:intergenic |
TTGTACCGGTATCGTCTATG+TGG | 0.615054 | 5_4:-45691704 | None:intergenic |
CCAGGGAAAATTATCCGCTG+TGG | 0.615566 | 5_4:+45690576 | Msa0853750:CDS |
TAAACGCACAAGGACTTCAA+AGG | 0.618082 | 5_4:+45692285 | Msa0853750:CDS |
TACCGGTATCGTCTATGTGG+AGG | 0.619310 | 5_4:-45691701 | None:intergenic |
GTGGAGAGAACTTGTTGTTG+AGG | 0.620323 | 5_4:+45691121 | Msa0853750:CDS |
GGTCACTGTTAGATTGCATG+AGG | 0.622465 | 5_4:+45692635 | Msa0853750:CDS |
CATTGTGAGACTGCTAATCA+AGG | 0.622781 | 5_4:+45691248 | Msa0853750:CDS |
AGGACGTTATATTCAACCAA+AGG | 0.623287 | 5_4:+45693943 | Msa0853750:CDS |
AAACAAAATTGAAGAGACTG+AGG | 0.625465 | 5_4:+45693019 | Msa0853750:CDS |
GCTAGAGAAAGGGTTATGCA+GGG | 0.625919 | 5_4:-45693907 | None:intergenic |
CTGAAGTGGATCAAGCAGAA+GGG | 0.627799 | 5_4:+45695880 | Msa0853750:CDS |
TCAGATTCCCCATCCACCAA+AGG | 0.629870 | 5_4:-45691377 | None:intergenic |
TTTGGCCGCAAATCCCGCAA+CGG | 0.630706 | 5_4:-45692998 | None:intergenic |
TTGACCACCCAACTGAGAGA+AGG | 0.631808 | 5_4:+45692053 | Msa0853750:CDS |
GGCTTTGCAAACCATGCTGG+TGG | 0.632141 | 5_4:+45692565 | Msa0853750:CDS |
CTTGTAATGTGAAGGAGTTG+TGG | 0.634145 | 5_4:+45691102 | Msa0853750:CDS |
CAATTCTTATGATACGCCGA+GGG | 0.635929 | 5_4:-45692787 | None:intergenic |
GGAAAATTATCCGCTGTGGG+AGG | 0.637624 | 5_4:+45690580 | Msa0853750:CDS |
TTAAAGAAAAGATTCCCGAA+TGG | 0.638413 | 5_4:+45692146 | Msa0853750:CDS |
CTGAAATCTGGTACCTACGA+GGG | 0.639712 | 5_4:-45695039 | None:intergenic |
ACTCTCCTACGTTTGAAGGG+AGG | 0.642713 | 5_4:+45692488 | Msa0853750:CDS |
GTTATCCTCCCTTCAAACGT+AGG | 0.643744 | 5_4:-45692493 | None:intergenic |
ATAGCAGAAGTGCCCCTCGT+AGG | 0.645166 | 5_4:+45695026 | Msa0853750:CDS |
CCTTCAAACAGATCATTGTG+CGG | 0.646292 | 5_4:-45692700 | None:intergenic |
GATCCACCCCAAATGAGCCA+AGG | 0.648744 | 5_4:+45691854 | Msa0853750:CDS |
TTTGCTTGATCTTAGCACCC+GGG | 0.649452 | 5_4:-45692344 | None:intergenic |
GACAAAACCAATCACCATCA+GGG | 0.650816 | 5_4:-45692968 | None:intergenic |
ACTAATTCTGATCATGGTGG+TGG | 0.655163 | 5_4:+45692169 | Msa0853750:CDS |
TGGAATATCTGATAAGCCTG+AGG | 0.656420 | 5_4:+45691292 | Msa0853750:CDS |
TAAACAACTGAGGATCACTC+AGG | 0.664286 | 5_4:+45690917 | Msa0853750:CDS |
CTAGAGAAAGGGTTATGCAG+GGG | 0.666463 | 5_4:-45693906 | None:intergenic |
ACAATTCTTATGATACGCCG+AGG | 0.669642 | 5_4:-45692788 | None:intergenic |
TGAAATCTGGTACCTACGAG+GGG | 0.676014 | 5_4:-45695038 | None:intergenic |
TGTTCTGTTTGTAACTACGG+TGG | 0.676365 | 5_4:+45692739 | Msa0853750:CDS |
ACTGAGAATTGGTTACCAAG+AGG | 0.676963 | 5_4:+45690954 | Msa0853750:CDS |
TTAGATTGTGGCTATCAGCG+AGG | 0.682175 | 5_4:+45690714 | Msa0853750:CDS |
AGAGAGTGAAGTACTTACCC+GGG | 0.682433 | 5_4:+45692327 | Msa0853750:CDS |
ACTTGGATGTAGGAGCAAGA+CGG | 0.682568 | 5_4:+45691598 | Msa0853750:CDS |
CGAGCTCATCCATTAAAACG+CGG | 0.682582 | 5_4:-45695082 | None:intergenic |
GAAGGGAGGATAACTCGCGA+AGG | 0.688944 | 5_4:+45692502 | Msa0853750:CDS |
AGAGAAACCATAAACGCACA+AGG | 0.696528 | 5_4:+45692275 | Msa0853750:CDS |
GTCACTGTTAGATTGCATGA+GGG | 0.696628 | 5_4:+45692636 | Msa0853750:CDS |
AGATTGCTGTCAATTTGAGG+TGG | 0.697297 | 5_4:-45691815 | None:intergenic |
CAGAATCTATATGGACTCAG+CGG | 0.703933 | 5_4:+45692544 | Msa0853750:CDS |
TGCTGAAAGTGACTTAGTGG+CGG | 0.706449 | 5_4:+45693830 | Msa0853750:CDS |
TGATTAGTGTGGCGACTGTG+AGG | 0.707183 | 5_4:+45694882 | Msa0853750:CDS |
TCACTCATTAGAGAGAAACT+CGG | 0.709740 | 5_4:+45691970 | Msa0853750:CDS |
TTGGTTACTGATCAAAACTG+TGG | 0.709900 | 5_4:+45691338 | Msa0853750:CDS |
TATGTCAACTCTGAGACTTG+CGG | 0.721346 | 5_4:+45693798 | Msa0853750:CDS |
CTCTAGCAGAGATATCGTGG+AGG | 0.726098 | 5_4:+45693923 | Msa0853750:CDS |
AGGTTGGAGTTAAACAACTG+AGG | 0.726333 | 5_4:+45690907 | Msa0853750:CDS |
AATTCTTATGATACGCCGAG+GGG | 0.728497 | 5_4:-45692786 | None:intergenic |
ACTGAAATCTGGTACCTACG+AGG | 0.735704 | 5_4:-45695040 | None:intergenic |
AACGCGTCTTCCTCCCACAG+CGG | 0.747933 | 5_4:-45690590 | None:intergenic |
GTGACAGTAGTATTTCACGA+TGG | 0.759670 | 5_4:-45691951 | None:intergenic |
TGGACTAATTCTGATCATGG+TGG | 0.786903 | 5_4:+45692166 | Msa0853750:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAAAGATTTGATTTTTATT+TGG | + | chr5_4:45690029-45690048 | Msa0853750:intron | 10.0% |
!! | AAAAACAATTGTTAAAAAAA+TGG | - | chr5_4:45690414-45690433 | None:intergenic | 10.0% |
!!! | ATGTAAAATTAATTTTGAAA+AGG | + | chr5_4:45695845-45695864 | Msa0853750:CDS | 10.0% |
!! | TATGAAAATAAAAATCATAC+AGG | - | chr5_4:45690250-45690269 | None:intergenic | 15.0% |
!! | TTAATATGTTATGATTGAAA+AGG | - | chr5_4:45692845-45692864 | None:intergenic | 15.0% |
!! | TTCTAAACTAGAATAAAAAA+GGG | - | chr5_4:45693306-45693325 | None:intergenic | 15.0% |
!! | TTTCTAAACTAGAATAAAAA+AGG | - | chr5_4:45693307-45693326 | None:intergenic | 15.0% |
!! | TTTGATAAAGGAAAAAAAAA+TGG | - | chr5_4:45693411-45693430 | None:intergenic | 15.0% |
!! | ATCTTCAAATAAATATGTTA+CGG | - | chr5_4:45694323-45694342 | None:intergenic | 15.0% |
!!! | TTGAGTATTTATTACAATTT+TGG | + | chr5_4:45694478-45694497 | Msa0853750:intron | 15.0% |
!!! | TTTCATTTTTTTAGGATATT+TGG | + | chr5_4:45694996-45695015 | Msa0853750:intron | 15.0% |
!! | TATATTTGATTATCTTGATA+TGG | + | chr5_4:45695162-45695181 | Msa0853750:intron | 15.0% |
!! | TTTATTTGGTTATGAATTTC+TGG | + | chr5_4:45690043-45690062 | Msa0853750:intron | 20.0% |
!! | TTATTTGGTTATGAATTTCT+GGG | + | chr5_4:45690044-45690063 | Msa0853750:intron | 20.0% |
!!! | AATAGGATAAATACTGATTA+TGG | + | chr5_4:45690345-45690364 | Msa0853750:intron | 20.0% |
!!! | TTTTTATAGAAGATTCTTTC+AGG | - | chr5_4:45690495-45690514 | None:intergenic | 20.0% |
!!! | TTTTTTCAATTTTTCAGTTG+AGG | + | chr5_4:45690520-45690539 | Msa0853750:CDS | 20.0% |
!!! | TAAATTGTTTGGAATGTTTA+AGG | - | chr5_4:45691192-45691211 | None:intergenic | 20.0% |
!! | AATCAGATAAAAATCGAAAA+CGG | + | chr5_4:45691495-45691514 | Msa0853750:CDS | 20.0% |
!! | TCATAAGAATTGTCTTAATT+TGG | + | chr5_4:45692798-45692817 | Msa0853750:CDS | 20.0% |
!! | CAGTATATATTTAAGTCATA+GGG | - | chr5_4:45693639-45693658 | None:intergenic | 20.0% |
!! | CAATGATAAACATAAATTGA+AGG | - | chr5_4:45693983-45694002 | None:intergenic | 20.0% |
!! | ATATCCATTAGAATCATATT+TGG | - | chr5_4:45694513-45694532 | None:intergenic | 20.0% |
!! | AACAAATACAATCTAAACTA+AGG | - | chr5_4:45694648-45694667 | None:intergenic | 20.0% |
!! | AAACTTATGTTAAACTTAGT+AGG | + | chr5_4:45695280-45695299 | Msa0853750:intron | 20.0% |
!!! | GAGAAATTTGATAATAAACT+TGG | - | chr5_4:45695343-45695362 | None:intergenic | 20.0% |
!! | TTTTGTGATTTGATGTTCTT+AGG | + | chr5_4:45690086-45690105 | Msa0853750:intron | 25.0% |
! | TTTGTGATTTGATGTTCTTA+GGG | + | chr5_4:45690087-45690106 | Msa0853750:intron | 25.0% |
! | CAGAATTACAAGAAAATCAA+AGG | - | chr5_4:45690190-45690209 | None:intergenic | 25.0% |
!!! | GTAATTCTGTTGTTGATTTA+TGG | + | chr5_4:45690201-45690220 | Msa0853750:intron | 25.0% |
!! | AAATACTGATTATGGTAATG+TGG | + | chr5_4:45690353-45690372 | Msa0853750:intron | 25.0% |
!!! | AAATGGAAAAGTGTTGATAA+AGG | - | chr5_4:45690397-45690416 | None:intergenic | 25.0% |
! | ATCAGATTATCTTATTGAAG+TGG | + | chr5_4:45690647-45690666 | Msa0853750:CDS | 25.0% |
!! | AACAGATTTGGTATGATATT+AGG | + | chr5_4:45691042-45691061 | Msa0853750:CDS | 25.0% |
!! | AGAAAACATCTTGTTTATCT+TGG | + | chr5_4:45691647-45691666 | Msa0853750:CDS | 25.0% |
! | AACTTTGGATTAAGTTTATC+CGG | - | chr5_4:45691734-45691753 | None:intergenic | 25.0% |
! | AAAATCGAAGTGTAAAACTT+TGG | - | chr5_4:45691749-45691768 | None:intergenic | 25.0% |
!! | AGTTACTAAAATTTTGCAAG+AGG | + | chr5_4:45691772-45691791 | Msa0853750:CDS | 25.0% |
! | ATTTGTTCTGTTTGTAACTA+CGG | + | chr5_4:45692736-45692755 | Msa0853750:CDS | 25.0% |
!! | TAAGAATTGTCTTAATTTGG+AGG | + | chr5_4:45692801-45692820 | Msa0853750:CDS | 25.0% |
! | ATGCAGAATGAAACTTAATA+TGG | - | chr5_4:45692937-45692956 | None:intergenic | 25.0% |
!! | AATCATCTTTTTCTCCATTT+TGG | - | chr5_4:45693215-45693234 | None:intergenic | 25.0% |
! | CAAGACGATATAAGAAAAAT+TGG | + | chr5_4:45693235-45693254 | Msa0853750:CDS | 25.0% |
!!! | TATAAGAAAAATTGGTTCTG+TGG | + | chr5_4:45693243-45693262 | Msa0853750:CDS | 25.0% |
! | TAAACTAGAATAAAAAAGGG+AGG | - | chr5_4:45693303-45693322 | None:intergenic | 25.0% |
!! | AAAGTATCAAGTGTTTGAAT+TGG | - | chr5_4:45693450-45693469 | None:intergenic | 25.0% |
! | GCAGTATATATTTAAGTCAT+AGG | - | chr5_4:45693640-45693659 | None:intergenic | 25.0% |
!! | AGAATTATGTTTTATGACAG+TGG | + | chr5_4:45693661-45693680 | Msa0853750:intron | 25.0% |
! | ACATAAATTGAAGGATAAGA+AGG | - | chr5_4:45693974-45693993 | None:intergenic | 25.0% |
!!! | GTTTTTCTTGATGATAAAGT+TGG | - | chr5_4:45694177-45694196 | None:intergenic | 25.0% |
! | GCATAGATATGTTAGAATTT+AGG | + | chr5_4:45694220-45694239 | Msa0853750:intron | 25.0% |
! | TTTGTTGCATATATAGTGTT+AGG | + | chr5_4:45694249-45694268 | Msa0853750:intron | 25.0% |
! | TTGTTGCATATATAGTGTTA+GGG | + | chr5_4:45694250-45694269 | Msa0853750:intron | 25.0% |
! | GAAATGCGTACATAAAAATA+AGG | - | chr5_4:45694362-45694381 | None:intergenic | 25.0% |
!! | ATAGATTTTGCACAATAAGT+TGG | - | chr5_4:45694392-45694411 | None:intergenic | 25.0% |
! | TGATCCAAATATGATTCTAA+TGG | + | chr5_4:45694506-45694525 | Msa0853750:intron | 25.0% |
!!! | TCTTTTTTGATCAAACAAGA+TGG | + | chr5_4:45694567-45694586 | Msa0853750:intron | 25.0% |
! | TGTGAATATAACAATAATGC+AGG | - | chr5_4:45694757-45694776 | None:intergenic | 25.0% |
! | AAATGAAGAATTGATTAGTG+TGG | + | chr5_4:45694871-45694890 | Msa0853750:CDS | 25.0% |
! | AAAAATGAAATGCCAAGTTA+TGG | - | chr5_4:45694986-45695005 | None:intergenic | 25.0% |
!!! | ACTTGGCATTTCATTTTTTT+AGG | + | chr5_4:45694988-45695007 | Msa0853750:intron | 25.0% |
! | GAACGATTATTGAAAAGATA+TGG | + | chr5_4:45695197-45695216 | Msa0853750:intron | 25.0% |
! | CCAATACAAGAATCATAAAA+AGG | - | chr5_4:45695606-45695625 | None:intergenic | 25.0% |
!! | CCTTTTTATGATTCTTGTAT+TGG | + | chr5_4:45695603-45695622 | Msa0853750:intron | 25.0% |
! | TCTTTAATTACGTGCATATT+TGG | - | chr5_4:45695740-45695759 | None:intergenic | 25.0% |
! | GTCTGCAATAAGAAAAAATA+AGG | - | chr5_4:45695787-45695806 | None:intergenic | 25.0% |
!!! | AAGTTACCATTTTGTTGTTT+TGG | - | chr5_4:45695816-45695835 | None:intergenic | 25.0% |
!! | GTGATAATGGAAATCGAAAA+AGG | + | chr5_4:45689920-45689939 | Msa0853750:CDS | 30.0% |
GAAATCGAAAAAGGAAAAGA+GGG | + | chr5_4:45689929-45689948 | Msa0853750:CDS | 30.0% | |
TCTTGTCAATGAAAAAGTTG+AGG | + | chr5_4:45689969-45689988 | Msa0853750:CDS | 30.0% | |
!!! | TGGGTTGTTGATTTTGTATT+TGG | + | chr5_4:45690063-45690082 | Msa0853750:intron | 30.0% |
!! | TTGTTGATTTATGGTTTCGA+TGG | + | chr5_4:45690210-45690229 | Msa0853750:intron | 30.0% |
!!! | TTTCTTGTTTTACGCTGTTT+TGG | + | chr5_4:45690298-45690317 | Msa0853750:intron | 30.0% |
ATTTCATGCAAGTGATGAAT+TGG | + | chr5_4:45690321-45690340 | Msa0853750:intron | 30.0% | |
TTTCATGCAAGTGATGAATT+GGG | + | chr5_4:45690322-45690341 | Msa0853750:intron | 30.0% | |
TTATAGAAGATTCTTTCAGG+TGG | - | chr5_4:45690492-45690511 | None:intergenic | 30.0% | |
!! | AATTTTTCAGTTGAGGAGTT+TGG | + | chr5_4:45690527-45690546 | Msa0853750:CDS | 30.0% |
AATCTGATTCTTCATCATCA+AGG | - | chr5_4:45690635-45690654 | None:intergenic | 30.0% | |
AGATTATCTTATTGAAGTGG+TGG | + | chr5_4:45690650-45690669 | Msa0853750:CDS | 30.0% | |
!! | GATGTTTCTAATGTTTTGGA+TGG | + | chr5_4:45690672-45690691 | Msa0853750:CDS | 30.0% |
! | ATGTGTTGATGTGAAATATC+AGG | + | chr5_4:45690797-45690816 | Msa0853750:CDS | 30.0% |
TCATTTCATCACCTAAATCT+GGG | - | chr5_4:45690887-45690906 | None:intergenic | 30.0% | |
TTCATTTCATCACCTAAATC+TGG | - | chr5_4:45690888-45690907 | None:intergenic | 30.0% | |
AGATTTAGGTGATGAAATGA+AGG | + | chr5_4:45690887-45690906 | Msa0853750:CDS | 30.0% | |
GTATGATATTAGGATGAGAA+AGG | + | chr5_4:45691052-45691071 | Msa0853750:CDS | 30.0% | |
ATTACAAGTCCATTCTCTAA+TGG | - | chr5_4:45691090-45691109 | None:intergenic | 30.0% | |
ATTCCAAACAATTTACTCGA+AGG | + | chr5_4:45691197-45691216 | Msa0853750:CDS | 30.0% | |
TCACAATGAACATTATCAGT+TGG | - | chr5_4:45691236-45691255 | None:intergenic | 30.0% | |
TGAATCAGACAAAAACCAAA+TGG | + | chr5_4:45691427-45691446 | Msa0853750:CDS | 30.0% | |
! | AACATCTTGTTTATCTTGGA+TGG | + | chr5_4:45691651-45691670 | Msa0853750:CDS | 30.0% |
ACTTGAAATTTAACTGGAGA+AGG | - | chr5_4:45691908-45691927 | None:intergenic | 30.0% | |
GGTTCAACTTGAAATTTAAC+TGG | - | chr5_4:45691914-45691933 | None:intergenic | 30.0% | |
TAAGAGAAAGTGGAAATTGA+AGG | + | chr5_4:45691997-45692016 | Msa0853750:CDS | 30.0% | |
AAAAAACATCTGTTAGCAGA+AGG | + | chr5_4:45692022-45692041 | Msa0853750:CDS | 30.0% | |
! | ATTCGGGAATCTTTTCTTTA+AGG | - | chr5_4:45692147-45692166 | None:intergenic | 30.0% |
TTAAAGAAAAGATTCCCGAA+TGG | + | chr5_4:45692146-45692165 | Msa0853750:CDS | 30.0% | |
ATGATCAGAATTAGTCCATT+CGG | - | chr5_4:45692164-45692183 | None:intergenic | 30.0% | |
! | AACCAAGACAGAATATTTTG+AGG | - | chr5_4:45692406-45692425 | None:intergenic | 30.0% |
! | AAAGTACAAGGTCTTTTACT+GGG | + | chr5_4:45692450-45692469 | Msa0853750:CDS | 30.0% |
TTCAAAAATATGCAAGCTGA+AGG | - | chr5_4:45692607-45692626 | None:intergenic | 30.0% | |
!! | TTCAGCTTGCATATTTTTGA+AGG | + | chr5_4:45692606-45692625 | Msa0853750:CDS | 30.0% |
TACATGGAAACAAAAAGGAA+AGG | - | chr5_4:45692890-45692909 | None:intergenic | 30.0% | |
!! | CAGTCTCTTCAATTTTGTTT+TGG | - | chr5_4:45693019-45693038 | None:intergenic | 30.0% |
AAACAAAATTGAAGAGACTG+AGG | + | chr5_4:45693019-45693038 | Msa0853750:CDS | 30.0% | |
TAAAACACATCACAAAGGAA+TGG | - | chr5_4:45693119-45693138 | None:intergenic | 30.0% | |
CAAACTAAAACACATCACAA+AGG | - | chr5_4:45693124-45693143 | None:intergenic | 30.0% | |
! | GAGTTGAAGACATTTTTCAT+TGG | - | chr5_4:45693169-45693188 | None:intergenic | 30.0% |
! | TCTCATTTTGCATGAAGAAT+TGG | + | chr5_4:45693335-45693354 | Msa0853750:intron | 30.0% |
! | TATTCTGATTTGACATTCGT+TGG | + | chr5_4:45693372-45693391 | Msa0853750:intron | 30.0% |
!! | GGAGTAATCAGTTTTGATAA+AGG | - | chr5_4:45693423-45693442 | None:intergenic | 30.0% |
ATCATGGTTGCATCTATTAA+TGG | + | chr5_4:45693498-45693517 | Msa0853750:intron | 30.0% | |
!!! | AATGCATGATTTTTGGTGAT+TGG | + | chr5_4:45693552-45693571 | Msa0853750:intron | 30.0% |
! | ACAGATTTAAGTTTGATGCT+AGG | + | chr5_4:45693600-45693619 | Msa0853750:intron | 30.0% |
! | CAGATTTAAGTTTGATGCTA+GGG | + | chr5_4:45693601-45693620 | Msa0853750:intron | 30.0% |
ATATTAACACCATGGTGTAA+TGG | - | chr5_4:45694117-45694136 | None:intergenic | 30.0% | |
! | GAGGAGTAAACAAAGTATTT+CGG | + | chr5_4:45694449-45694468 | Msa0853750:intron | 30.0% |
AAAAAGAATCTAAGCACAGA+AGG | - | chr5_4:45694554-45694573 | None:intergenic | 30.0% | |
!!! | TTTTGAGGTGCAAACATATT+TGG | - | chr5_4:45694625-45694644 | None:intergenic | 30.0% |
! | CAATCTAAACTAAGGTTTTG+AGG | - | chr5_4:45694640-45694659 | None:intergenic | 30.0% |
TTAACAAATCCATCAGTGAA+TGG | - | chr5_4:45694689-45694708 | None:intergenic | 30.0% | |
!! | CATTTCAAGTTTCCATAACT+TGG | + | chr5_4:45694971-45694990 | Msa0853750:intron | 30.0% |
CTCTTGATTACTATATGCTT+AGG | - | chr5_4:45695223-45695242 | None:intergenic | 30.0% | |
AGGTTATAATCTAATCAGTG+AGG | - | chr5_4:45695767-45695786 | None:intergenic | 30.0% | |
GATGGTGATAAGAGTGATAA+TGG | + | chr5_4:45689907-45689926 | Msa0853750:CDS | 35.0% | |
GGAAATCGAAAAAGGAAAAG+AGG | + | chr5_4:45689928-45689947 | Msa0853750:CDS | 35.0% | |
ATGTTCTTAGGGTTTCTTTG+AGG | + | chr5_4:45690098-45690117 | Msa0853750:intron | 35.0% | |
TGTTCTTAGGGTTTCTTTGA+GGG | + | chr5_4:45690099-45690118 | Msa0853750:intron | 35.0% | |
ATACATGCATGTTGTGTGAA+TGG | + | chr5_4:45690444-45690463 | Msa0853750:CDS | 35.0% | |
! | AGTTTGGAAGATGGTTTTCT+GGG | + | chr5_4:45690543-45690562 | Msa0853750:CDS | 35.0% |
!! | GGTGGATGTTTCTAATGTTT+TGG | + | chr5_4:45690668-45690687 | Msa0853750:CDS | 35.0% |
! | TCTTCATCTGCTTTAGATTG+TGG | + | chr5_4:45690702-45690721 | Msa0853750:CDS | 35.0% |
TTTATCCGTAACTCAATTGG+AGG | - | chr5_4:45690759-45690778 | None:intergenic | 35.0% | |
TCCAATTGAGTTACGGATAA+AGG | + | chr5_4:45690758-45690777 | Msa0853750:CDS | 35.0% | |
TCCTTTATCCGTAACTCAAT+TGG | - | chr5_4:45690762-45690781 | None:intergenic | 35.0% | |
ACATCAACACATTGTCCAAA+TGG | - | chr5_4:45690789-45690808 | None:intergenic | 35.0% | |
ATGTGAAATATCAGGATGCT+TGG | + | chr5_4:45690805-45690824 | Msa0853750:CDS | 35.0% | |
AGCATATTCTTCCCAGATTT+AGG | + | chr5_4:45690873-45690892 | Msa0853750:CDS | 35.0% | |
TTAGGTGATGAAATGAAGGT+TGG | + | chr5_4:45690891-45690910 | Msa0853750:CDS | 35.0% | |
!! | GGTTTTTCTTGAGTTGTTTG+AGG | + | chr5_4:45690983-45691002 | Msa0853750:CDS | 35.0% |
TTGCTGAAACCATTAGAGAA+TGG | + | chr5_4:45691078-45691097 | Msa0853750:CDS | 35.0% | |
! | AGAATGGACTTGTAATGTGA+AGG | + | chr5_4:45691094-45691113 | Msa0853750:CDS | 35.0% |
!! | GAACTTGTTGTTGAGGTAAT+TGG | + | chr5_4:45691128-45691147 | Msa0853750:CDS | 35.0% |
! | TGTTTGGAATGTTTAAGGCA+GGG | - | chr5_4:45691187-45691206 | None:intergenic | 35.0% |
! | TTGTTTGGAATGTTTAAGGC+AGG | - | chr5_4:45691188-45691207 | None:intergenic | 35.0% |
TCTCCTTCGAGTAAATTGTT+TGG | - | chr5_4:45691203-45691222 | None:intergenic | 35.0% | |
!!! | GATGCATTTGGTTTTGACAT+TGG | + | chr5_4:45691272-45691291 | Msa0853750:CDS | 35.0% |
ATCAGTAACCAACAAGTTTG+AGG | - | chr5_4:45691330-45691349 | None:intergenic | 35.0% | |
TTGGTTACTGATCAAAACTG+TGG | + | chr5_4:45691338-45691357 | Msa0853750:CDS | 35.0% | |
ATCAGACAAAAACCAAATGG+TGG | + | chr5_4:45691430-45691449 | Msa0853750:CDS | 35.0% | |
! | GACGTTCTAAGTCCATAATT+TGG | + | chr5_4:45691519-45691538 | Msa0853750:CDS | 35.0% |
TTCCAAAGGCTTCCAAATTA+TGG | - | chr5_4:45691534-45691553 | None:intergenic | 35.0% | |
GCATACTCATCAATAACTTC+AGG | - | chr5_4:45691578-45691597 | None:intergenic | 35.0% | |
GTTATTGATGAGTATGCACT+TGG | + | chr5_4:45691581-45691600 | Msa0853750:CDS | 35.0% | |
ATCTTGGATGGACAATTGAA+TGG | + | chr5_4:45691663-45691682 | Msa0853750:CDS | 35.0% | |
!!! | ATGTGGAGGAGTATTGTTTT+CGG | - | chr5_4:45691690-45691709 | None:intergenic | 35.0% |
GAAAGATTGCTGTCAATTTG+AGG | - | chr5_4:45691821-45691840 | None:intergenic | 35.0% | |
TTTAACTGGAGAAGGTTCAT+TGG | - | chr5_4:45691900-45691919 | None:intergenic | 35.0% | |
TCACTCATTAGAGAGAAACT+CGG | + | chr5_4:45691970-45691989 | Msa0853750:CDS | 35.0% | |
TGATCAGAATTAGTCCATTC+GGG | - | chr5_4:45692163-45692182 | None:intergenic | 35.0% | |
!! | GAATGGACTAATTCTGATCA+TGG | + | chr5_4:45692163-45692182 | Msa0853750:CDS | 35.0% |
!!! | AGGCTCTTTTTGAAGCAATT+GGG | - | chr5_4:45692218-45692237 | None:intergenic | 35.0% |
CCATCTATAGTACGTAATTC+AGG | - | chr5_4:45692238-45692257 | None:intergenic | 35.0% | |
CCTGAATTACGTACTATAGA+TGG | + | chr5_4:45692235-45692254 | Msa0853750:CDS | 35.0% | |
TTATGGTTTCTCTTTGCAGT+TGG | - | chr5_4:45692268-45692287 | None:intergenic | 35.0% | |
AGCCTCAAAATATTCTGTCT+TGG | + | chr5_4:45692401-45692420 | Msa0853750:CDS | 35.0% | |
CAGTAAAAGACCTTGTACTT+TGG | - | chr5_4:45692451-45692470 | None:intergenic | 35.0% | |
! | CAAAGTACAAGGTCTTTTAC+TGG | + | chr5_4:45692449-45692468 | Msa0853750:CDS | 35.0% |
ACCTGTTGTCAGAATCTATA+TGG | + | chr5_4:45692535-45692554 | Msa0853750:CDS | 35.0% | |
TCCATATAGATTCTGACAAC+AGG | - | chr5_4:45692539-45692558 | None:intergenic | 35.0% | |
!! | GCTTGCATATTTTTGAAGGA+TGG | + | chr5_4:45692610-45692629 | Msa0853750:CDS | 35.0% |
!! | GCATATTTTTGAAGGATGGT+AGG | + | chr5_4:45692614-45692633 | Msa0853750:CDS | 35.0% |
TCACAGGACAAGAGAAATTA+CGG | + | chr5_4:45692672-45692691 | Msa0853750:CDS | 35.0% | |
GGAGTTACATGGAAACAAAA+AGG | - | chr5_4:45692895-45692914 | None:intergenic | 35.0% | |
ACTGAATTGAAGGAGTTACA+TGG | - | chr5_4:45692906-45692925 | None:intergenic | 35.0% | |
AAGTTTCATTCTGCATGTGT+AGG | + | chr5_4:45692941-45692960 | Msa0853750:intron | 35.0% | |
AGTTTCATTCTGCATGTGTA+GGG | + | chr5_4:45692942-45692961 | Msa0853750:intron | 35.0% | |
AAAATTGAAGAGACTGAGGA+TGG | + | chr5_4:45693023-45693042 | Msa0853750:CDS | 35.0% | |
! | CATCTTTTTCTCCATTTTGG+AGG | - | chr5_4:45693212-45693231 | None:intergenic | 35.0% |
ACTAGAATAAAAAAGGGAGG+TGG | - | chr5_4:45693300-45693319 | None:intergenic | 35.0% | |
TCAAGTGTTTGAATTGGATG+TGG | - | chr5_4:45693444-45693463 | None:intergenic | 35.0% | |
TGAGCTCTTTATTCAGATCA+TGG | + | chr5_4:45693482-45693501 | Msa0853750:intron | 35.0% | |
! | AGTCGAGAATGCATGATTTT+TGG | + | chr5_4:45693545-45693564 | Msa0853750:intron | 35.0% |
TGATGCTAGGGAAACATTTA+AGG | + | chr5_4:45693613-45693632 | Msa0853750:intron | 35.0% | |
!! | CTGGCTTTCCTAATAGATTT+TGG | - | chr5_4:45693737-45693756 | None:intergenic | 35.0% |
!! | ATTAGGAAAGCCAGTTTTAG+TGG | + | chr5_4:45693743-45693762 | Msa0853750:CDS | 35.0% |
!! | TTAGGAAAGCCAGTTTTAGT+GGG | + | chr5_4:45693744-45693763 | Msa0853750:CDS | 35.0% |
AGGACGTTATATTCAACCAA+AGG | + | chr5_4:45693943-45693962 | Msa0853750:CDS | 35.0% | |
GGAAAAAGGCTCAAAATTGA+AGG | - | chr5_4:45694096-45694115 | None:intergenic | 35.0% | |
! | ACACCATGGTGTTAATATTC+AGG | + | chr5_4:45694119-45694138 | Msa0853750:intron | 35.0% |
CTACCTGAATATTAACACCA+TGG | - | chr5_4:45694125-45694144 | None:intergenic | 35.0% | |
TTTACGTTTATCATGCAGGA+TGG | + | chr5_4:45694286-45694305 | Msa0853750:intron | 35.0% | |
GCAAAATCTATGCCTATAGA+TGG | + | chr5_4:45694401-45694420 | Msa0853750:intron | 35.0% | |
CTAATCATGATGCCATCTAT+AGG | - | chr5_4:45694416-45694435 | None:intergenic | 35.0% | |
TTTGTTTACTCCTCAAACAC+TGG | - | chr5_4:45694443-45694462 | None:intergenic | 35.0% | |
!! | GCATGCAAAAGTATCACTAT+AGG | + | chr5_4:45694589-45694608 | Msa0853750:intron | 35.0% |
!! | TCACTGATGGATTTGTTAAC+AGG | + | chr5_4:45694690-45694709 | Msa0853750:intron | 35.0% |
AAAGTACATACATCAGCCAT+TGG | - | chr5_4:45694785-45694804 | None:intergenic | 35.0% | |
AATGGCTGATGTATGTACTT+TGG | + | chr5_4:45694784-45694803 | Msa0853750:intron | 35.0% | |
! | TTTAATGGATGAGCTCGAAA+AGG | + | chr5_4:45695088-45695107 | Msa0853750:CDS | 35.0% |
AATAATCGTTCGAATGTCAC+AGG | - | chr5_4:45695188-45695207 | None:intergenic | 35.0% | |
TATTCTTTCCTGGACTTTCA+AGG | + | chr5_4:45695511-45695530 | Msa0853750:intron | 35.0% | |
! | CAACAGTTTTTGACACATGA+CGG | - | chr5_4:45695539-45695558 | None:intergenic | 35.0% |
!! | TCTTGTATTGGCTGTTAGTT+TGG | + | chr5_4:45695615-45695634 | Msa0853750:intron | 35.0% |
AGTTTGGCATAATCACAATG+TGG | + | chr5_4:45695631-45695650 | Msa0853750:intron | 35.0% | |
TACGTGCATATTTGGATTGT+CGG | - | chr5_4:45695732-45695751 | None:intergenic | 35.0% | |
ACGACTCCAAAACAACAAAA+TGG | + | chr5_4:45695807-45695826 | Msa0853750:CDS | 35.0% | |
!! | GAATGATGGATCTACAAGTT+TGG | + | chr5_4:45695916-45695935 | Msa0853750:CDS | 35.0% |
GTTCTTAGGGTTTCTTTGAG+GGG | + | chr5_4:45690100-45690119 | Msa0853750:intron | 40.0% | |
GCAAGTGATGAATTGGGAAT+AGG | + | chr5_4:45690328-45690347 | Msa0853750:intron | 40.0% | |
! | GAGTTTGGAAGATGGTTTTC+TGG | + | chr5_4:45690542-45690561 | Msa0853750:CDS | 40.0% |
!!! | AAGATGGTTTTCTGGGATCA+TGG | + | chr5_4:45690550-45690569 | Msa0853750:CDS | 40.0% |
CGGATAAAGGATCTTCCATT+TGG | + | chr5_4:45690771-45690790 | Msa0853750:CDS | 40.0% | |
TGAAATATCAGGATGCTTGG+TGG | + | chr5_4:45690808-45690827 | Msa0853750:CDS | 40.0% | |
GAAATATCAGGATGCTTGGT+GGG | + | chr5_4:45690809-45690828 | Msa0853750:CDS | 40.0% | |
AGGTTGGAGTTAAACAACTG+AGG | + | chr5_4:45690907-45690926 | Msa0853750:CDS | 40.0% | |
TAAACAACTGAGGATCACTC+AGG | + | chr5_4:45690917-45690936 | Msa0853750:CDS | 40.0% | |
GGGATGAATCAACTGAGAAT+TGG | + | chr5_4:45690943-45690962 | Msa0853750:CDS | 40.0% | |
ACTGAGAATTGGTTACCAAG+AGG | + | chr5_4:45690954-45690973 | Msa0853750:CDS | 40.0% | |
CTGAGAATTGGTTACCAAGA+GGG | + | chr5_4:45690955-45690974 | Msa0853750:CDS | 40.0% | |
ATTGGTTACCAAGAGGGAAA+TGG | + | chr5_4:45690961-45690980 | Msa0853750:CDS | 40.0% | |
TTGGTTACCAAGAGGGAAAT+GGG | + | chr5_4:45690962-45690981 | Msa0853750:CDS | 40.0% | |
AGAAAAACCCATTTCCCTCT+TGG | - | chr5_4:45690972-45690991 | None:intergenic | 40.0% | |
CTTGTAATGTGAAGGAGTTG+TGG | + | chr5_4:45691102-45691121 | Msa0853750:CDS | 40.0% | |
CATTGTGAGACTGCTAATCA+AGG | + | chr5_4:45691248-45691267 | Msa0853750:CDS | 40.0% | |
GCTAATCAAGGTGATGCATT+TGG | + | chr5_4:45691260-45691279 | Msa0853750:CDS | 40.0% | |
TGGAATATCTGATAAGCCTG+AGG | + | chr5_4:45691292-45691311 | Msa0853750:CDS | 40.0% | |
AACCAACAAGTTTGAGGAGT+CGG | - | chr5_4:45691324-45691343 | None:intergenic | 40.0% | |
!! | CAAAAACCAAATGGTGGATG+TGG | + | chr5_4:45691436-45691455 | Msa0853750:CDS | 40.0% |
CAAATTCCACATCCACCATT+TGG | - | chr5_4:45691445-45691464 | None:intergenic | 40.0% | |
GGTGGATGTGGAATTTGATA+AGG | + | chr5_4:45691448-45691467 | Msa0853750:CDS | 40.0% | |
GTCCATAATTTGGAAGCCTT+TGG | + | chr5_4:45691529-45691548 | Msa0853750:CDS | 40.0% | |
TCAACTTCAGACAGTTCCAA+AGG | - | chr5_4:45691548-45691567 | None:intergenic | 40.0% | |
ATGAGTATGCACTTGGATGT+AGG | + | chr5_4:45691588-45691607 | Msa0853750:CDS | 40.0% | |
AGGATCCTAACATGAACTCT+GGG | + | chr5_4:45691792-45691811 | Msa0853750:CDS | 40.0% | |
AGATTGCTGTCAATTTGAGG+TGG | - | chr5_4:45691818-45691837 | None:intergenic | 40.0% | |
ATGGCAAGAGGACAAAATTC+TGG | - | chr5_4:45691935-45691954 | None:intergenic | 40.0% | |
TAGTATTTCACGATGGCAAG+AGG | - | chr5_4:45691947-45691966 | None:intergenic | 40.0% | |
GTGACAGTAGTATTTCACGA+TGG | - | chr5_4:45691954-45691973 | None:intergenic | 40.0% | |
AACATCTGTTAGCAGAAGGA+TGG | + | chr5_4:45692026-45692045 | Msa0853750:CDS | 40.0% | |
TAGTCTTCCTTCTCTCAGTT+GGG | - | chr5_4:45692063-45692082 | None:intergenic | 40.0% | |
TCTCCACAAGATCAGTGTTT+AGG | + | chr5_4:45692094-45692113 | Msa0853750:CDS | 40.0% | |
TGGACTAATTCTGATCATGG+TGG | + | chr5_4:45692166-45692185 | Msa0853750:CDS | 40.0% | |
ACTAATTCTGATCATGGTGG+TGG | + | chr5_4:45692169-45692188 | Msa0853750:CDS | 40.0% | |
!!! | CAGGCTCTTTTTGAAGCAAT+TGG | - | chr5_4:45692219-45692238 | None:intergenic | 40.0% |
AGAGAAACCATAAACGCACA+AGG | + | chr5_4:45692275-45692294 | Msa0853750:CDS | 40.0% | |
TTGAAGTCCTTGTGCGTTTA+TGG | - | chr5_4:45692285-45692304 | None:intergenic | 40.0% | |
TAAACGCACAAGGACTTCAA+AGG | + | chr5_4:45692285-45692304 | Msa0853750:CDS | 40.0% | |
TTCAAAGGCTAGCACACAAA+AGG | + | chr5_4:45692300-45692319 | Msa0853750:CDS | 40.0% | |
! | TAGAGAGTGAAGTACTTACC+CGG | + | chr5_4:45692326-45692345 | Msa0853750:CDS | 40.0% |
! | TTTTGCTTGATCTTAGCACC+CGG | - | chr5_4:45692348-45692367 | None:intergenic | 40.0% |
GGTGCTAAGATCAAGCAAAA+GGG | + | chr5_4:45692348-45692367 | Msa0853750:CDS | 40.0% | |
!! | AAAAGGGTGCAGAAGGTTTT+GGG | + | chr5_4:45692364-45692383 | Msa0853750:CDS | 40.0% |
CATTGTGTTGCCAAAGTACA+AGG | + | chr5_4:45692438-45692457 | Msa0853750:CDS | 40.0% | |
GAAACTCTCCTACGTTTGAA+GGG | + | chr5_4:45692485-45692504 | Msa0853750:CDS | 40.0% | |
CAGAATCTATATGGACTCAG+CGG | + | chr5_4:45692544-45692563 | Msa0853750:CDS | 40.0% | |
GTCACTGTTAGATTGCATGA+GGG | + | chr5_4:45692636-45692655 | Msa0853750:CDS | 40.0% | |
CCTTCAAACAGATCATTGTG+CGG | - | chr5_4:45692703-45692722 | None:intergenic | 40.0% | |
TGTTCTGTTTGTAACTACGG+TGG | + | chr5_4:45692739-45692758 | Msa0853750:CDS | 40.0% | |
AATTCTTATGATACGCCGAG+GGG | - | chr5_4:45692789-45692808 | None:intergenic | 40.0% | |
CAATTCTTATGATACGCCGA+GGG | - | chr5_4:45692790-45692809 | None:intergenic | 40.0% | |
ACAATTCTTATGATACGCCG+AGG | - | chr5_4:45692791-45692810 | None:intergenic | 40.0% | |
!! | GGCATGAAGTACTGAATTGA+AGG | - | chr5_4:45692916-45692935 | None:intergenic | 40.0% |
GACAAAACCAATCACCATCA+GGG | - | chr5_4:45692971-45692990 | None:intergenic | 40.0% | |
ACACATCACAAAGGAATGGA+TGG | - | chr5_4:45693115-45693134 | None:intergenic | 40.0% | |
!! | TAGGAAAGCCAGTTTTAGTG+GGG | + | chr5_4:45693745-45693764 | Msa0853750:CDS | 40.0% |
GGACAATCTAACTTGGACAT+TGG | + | chr5_4:45693770-45693789 | Msa0853750:CDS | 40.0% | |
!! | TATGTCAACTCTGAGACTTG+CGG | + | chr5_4:45693798-45693817 | Msa0853750:CDS | 40.0% |
CGATATCTCTGCTAGAGAAA+GGG | - | chr5_4:45693920-45693939 | None:intergenic | 40.0% | |
ACGATATCTCTGCTAGAGAA+AGG | - | chr5_4:45693921-45693940 | None:intergenic | 40.0% | |
TTTCTCTAGCAGAGATATCG+TGG | + | chr5_4:45693920-45693939 | Msa0853750:CDS | 40.0% | |
GGATAAGAAGGTCTAACCTT+TGG | - | chr5_4:45693962-45693981 | None:intergenic | 40.0% | |
! | GTAAGCAAAGCTATTTCAGC+AGG | - | chr5_4:45694074-45694093 | None:intergenic | 40.0% |
! | AGCCTTTTTCCATTACACCA+TGG | + | chr5_4:45694105-45694124 | Msa0853750:intron | 40.0% |
! | CACCATGGTGTAATGGAAAA+AGG | - | chr5_4:45694110-45694129 | None:intergenic | 40.0% |
TAGTGTTAGGGCAAAGTTTG+CGG | + | chr5_4:45694262-45694281 | Msa0853750:intron | 40.0% | |
TCATGCAGGATGGAATTTCT+TGG | + | chr5_4:45694296-45694315 | Msa0853750:intron | 40.0% | |
TCTTTGAGTCCATTCACTGA+TGG | + | chr5_4:45694677-45694696 | Msa0853750:intron | 40.0% | |
TTATATTCACACTGCGCCAA+TGG | + | chr5_4:45694766-45694785 | Msa0853750:intron | 40.0% | |
!! | TATGTACTTTGGAACCTCGT+AGG | + | chr5_4:45694795-45694814 | Msa0853750:intron | 40.0% |
CTCAATCGACTAAACTTCCA+GGG | + | chr5_4:45694824-45694843 | Msa0853750:CDS | 40.0% | |
GAAGTACAGTATAGAAACCC+TGG | - | chr5_4:45694844-45694863 | None:intergenic | 40.0% | |
AAGTCGTCTGTACTGAAATC+TGG | - | chr5_4:45695054-45695073 | None:intergenic | 40.0% | |
AGATTTCAGTACAGACGACT+TGG | + | chr5_4:45695053-45695072 | Msa0853750:CDS | 40.0% | |
TCATCAGAAGCTAAAGCAAC+TGG | + | chr5_4:45695381-45695400 | Msa0853750:intron | 40.0% | |
CATCAGAAGCTAAAGCAACT+GGG | + | chr5_4:45695382-45695401 | Msa0853750:intron | 40.0% | |
! | GACACATGGACGAATTCTTT+TGG | + | chr5_4:45695445-45695464 | Msa0853750:intron | 40.0% |
! | AGCAGATGACGAATTTTGAG+AGG | + | chr5_4:45695473-45695492 | Msa0853750:intron | 40.0% |
!! | TTTTGAGAGGTCACAGTTTC+TGG | + | chr5_4:45695486-45695505 | Msa0853750:intron | 40.0% |
! | GTTTCTGGACTATTCTTTCC+TGG | + | chr5_4:45695501-45695520 | Msa0853750:intron | 40.0% |
GTTGACAAGATTTCCATCTC+CGG | + | chr5_4:45695555-45695574 | Msa0853750:intron | 40.0% | |
AAGATTTCCATCTCCGGAAT+CGG | + | chr5_4:45695561-45695580 | Msa0853750:intron | 40.0% | |
GATTGGCAAAAGAGGAATGA+TGG | + | chr5_4:45695902-45695921 | Msa0853750:CDS | 40.0% | |
CAGTTGAGGAGTTTGGAAGA+TGG | + | chr5_4:45690534-45690553 | Msa0853750:CDS | 45.0% | |
CAGGGAAAATTATCCGCTGT+GGG | + | chr5_4:45690577-45690596 | Msa0853750:CDS | 45.0% | |
TTAGATTGTGGCTATCAGCG+AGG | + | chr5_4:45690714-45690733 | Msa0853750:CDS | 45.0% | |
AACTCAATTGGAGGCGGTAA+CGG | - | chr5_4:45690750-45690769 | None:intergenic | 45.0% | |
TACCGCCTCCAATTGAGTTA+CGG | + | chr5_4:45690751-45690770 | Msa0853750:CDS | 45.0% | |
ATCCGTAACTCAATTGGAGG+CGG | - | chr5_4:45690756-45690775 | None:intergenic | 45.0% | |
AACTGAGGATCACTCAGGAT+TGG | + | chr5_4:45690922-45690941 | Msa0853750:CDS | 45.0% | |
ACTGAGGATCACTCAGGATT+GGG | + | chr5_4:45690923-45690942 | Msa0853750:CDS | 45.0% | |
! | AGTTGTTTGAGGAGTGTGAG+AGG | + | chr5_4:45690994-45691013 | Msa0853750:CDS | 45.0% |
! | GTTGTTTGAGGAGTGTGAGA+GGG | + | chr5_4:45690995-45691014 | Msa0853750:CDS | 45.0% |
GGTATCCTATGTTGCAGTCT+CGG | + | chr5_4:45691016-45691035 | Msa0853750:CDS | 45.0% | |
TTTCACCGAGACTGCAACAT+AGG | - | chr5_4:45691024-45691043 | None:intergenic | 45.0% | |
CAGTCTCGGTGAAACAGATT+TGG | + | chr5_4:45691030-45691049 | Msa0853750:CDS | 45.0% | |
!! | GTGGAGAGAACTTGTTGTTG+AGG | + | chr5_4:45691121-45691140 | Msa0853750:CDS | 45.0% |
GCGAACTTCGCTTAATGTGA+GGG | - | chr5_4:45691165-45691184 | None:intergenic | 45.0% | |
CAGCACAAGCATCATTCCTT+TGG | + | chr5_4:45691361-45691380 | Msa0853750:CDS | 45.0% | |
CACAAGCATCATTCCTTTGG+TGG | + | chr5_4:45691364-45691383 | Msa0853750:CDS | 45.0% | |
AGCATCATTCCTTTGGTGGA+TGG | + | chr5_4:45691368-45691387 | Msa0853750:CDS | 45.0% | |
! | GCATCATTCCTTTGGTGGAT+GGG | + | chr5_4:45691369-45691388 | Msa0853750:CDS | 45.0% |
! | CATCATTCCTTTGGTGGATG+GGG | + | chr5_4:45691370-45691389 | Msa0853750:CDS | 45.0% |
ACTTGGATGTAGGAGCAAGA+CGG | + | chr5_4:45691598-45691617 | Msa0853750:CDS | 45.0% | |
! | TTGTACCGGTATCGTCTATG+TGG | - | chr5_4:45691707-45691726 | None:intergenic | 45.0% |
GTTTATCCGGAGACTTGTAC+CGG | - | chr5_4:45691721-45691740 | None:intergenic | 45.0% | |
GAGGATCCTAACATGAACTC+TGG | + | chr5_4:45691791-45691810 | Msa0853750:CDS | 45.0% | |
TCGAAACCTTGGCTCATTTG+GGG | - | chr5_4:45691863-45691882 | None:intergenic | 45.0% | |
GTCGAAACCTTGGCTCATTT+GGG | - | chr5_4:45691864-45691883 | None:intergenic | 45.0% | |
ACTGGAGAAGGTTCATTGGT+TGG | - | chr5_4:45691896-45691915 | None:intergenic | 45.0% | |
ACTCGGCTGATAAGAGAAAG+TGG | + | chr5_4:45691987-45692006 | Msa0853750:CDS | 45.0% | |
GTAGTCTTCCTTCTCTCAGT+TGG | - | chr5_4:45692064-45692083 | None:intergenic | 45.0% | |
GTGCCTAAACACTGATCTTG+TGG | - | chr5_4:45692100-45692119 | None:intergenic | 45.0% | |
CAGTGTTTAGGCACACTTCA+AGG | + | chr5_4:45692106-45692125 | Msa0853750:CDS | 45.0% | |
TGGTTTCTCTTTGCAGTTGG+TGG | - | chr5_4:45692265-45692284 | None:intergenic | 45.0% | |
! | AGAGAGTGAAGTACTTACCC+GGG | + | chr5_4:45692327-45692346 | Msa0853750:CDS | 45.0% |
TTTGCTTGATCTTAGCACCC+GGG | - | chr5_4:45692347-45692366 | None:intergenic | 45.0% | |
GGGTGCTAAGATCAAGCAAA+AGG | + | chr5_4:45692347-45692366 | Msa0853750:CDS | 45.0% | |
! | ATCAAGCAAAAGGGTGCAGA+AGG | + | chr5_4:45692357-45692376 | Msa0853750:CDS | 45.0% |
!! | CAAAAGGGTGCAGAAGGTTT+TGG | + | chr5_4:45692363-45692382 | Msa0853750:CDS | 45.0% |
! | GTCTTTTACTGGGAAACCGA+AGG | + | chr5_4:45692460-45692479 | Msa0853750:CDS | 45.0% |
! | TTTTACTGGGAAACCGAAGG+AGG | + | chr5_4:45692463-45692482 | Msa0853750:CDS | 45.0% |
GGAAACTCTCCTACGTTTGA+AGG | + | chr5_4:45692484-45692503 | Msa0853750:CDS | 45.0% | |
GTTATCCTCCCTTCAAACGT+AGG | - | chr5_4:45692496-45692515 | None:intergenic | 45.0% | |
GGATAACTCGCGAAGGAATT+AGG | + | chr5_4:45692509-45692528 | Msa0853750:CDS | 45.0% | |
GGTCACTGTTAGATTGCATG+AGG | + | chr5_4:45692635-45692654 | Msa0853750:CDS | 45.0% | |
GGGAAGTAATGCAAGATCAC+AGG | + | chr5_4:45692656-45692675 | Msa0853750:CDS | 45.0% | |
CCGCACAATGATCTGTTTGA+AGG | + | chr5_4:45692700-45692719 | Msa0853750:CDS | 45.0% | |
GGACAAAACCAATCACCATC+AGG | - | chr5_4:45692972-45692991 | None:intergenic | 45.0% | |
CATGTTGAGTGCCTCCAAAA+TGG | + | chr5_4:45693198-45693217 | Msa0853750:CDS | 45.0% | |
! | GCACTTTTCGCAGGTCTATA+CGG | + | chr5_4:45693707-45693726 | Msa0853750:intron | 45.0% |
! | CACTTTTCGCAGGTCTATAC+GGG | + | chr5_4:45693708-45693727 | Msa0853750:intron | 45.0% |
! | ACTTTTCGCAGGTCTATACG+GGG | + | chr5_4:45693709-45693728 | Msa0853750:intron | 45.0% |
ACGGGGCTCCAAAATCTATT+AGG | + | chr5_4:45693726-45693745 | Msa0853750:CDS | 45.0% | |
!! | AGGAAAGCCAGTTTTAGTGG+GGG | + | chr5_4:45693746-45693765 | Msa0853750:CDS | 45.0% |
! | TGGTGCTGAAAGTGACTTAG+TGG | + | chr5_4:45693827-45693846 | Msa0853750:CDS | 45.0% |
TGCTGAAAGTGACTTAGTGG+CGG | + | chr5_4:45693830-45693849 | Msa0853750:CDS | 45.0% | |
! | CAAACTGAGTGTTGCACTCT+CGG | + | chr5_4:45693863-45693882 | Msa0853750:CDS | 45.0% |
CTAGAGAAAGGGTTATGCAG+GGG | - | chr5_4:45693909-45693928 | None:intergenic | 45.0% | |
GCTAGAGAAAGGGTTATGCA+GGG | - | chr5_4:45693910-45693929 | None:intergenic | 45.0% | |
TGCTAGAGAAAGGGTTATGC+AGG | - | chr5_4:45693911-45693930 | None:intergenic | 45.0% | |
CGGCTTTACGTTTATCATGC+AGG | + | chr5_4:45694282-45694301 | Msa0853750:intron | 45.0% | |
GATTAGTGAGCCAGTGTTTG+AGG | + | chr5_4:45694430-45694449 | Msa0853750:intron | 45.0% | |
GCTCAATCGACTAAACTTCC+AGG | + | chr5_4:45694823-45694842 | Msa0853750:CDS | 45.0% | |
TGAAATCTGGTACCTACGAG+GGG | - | chr5_4:45695041-45695060 | None:intergenic | 45.0% | |
CTGAAATCTGGTACCTACGA+GGG | - | chr5_4:45695042-45695061 | None:intergenic | 45.0% | |
ACTGAAATCTGGTACCTACG+AGG | - | chr5_4:45695043-45695062 | None:intergenic | 45.0% | |
! | TGGAATGTGCCGCGTTTTAA+TGG | + | chr5_4:45695073-45695092 | Msa0853750:CDS | 45.0% |
CGAGCTCATCCATTAAAACG+CGG | - | chr5_4:45695085-45695104 | None:intergenic | 45.0% | |
! | CCTCTTGTTACAACCGATTC+CGG | - | chr5_4:45695577-45695596 | None:intergenic | 45.0% |
GCTTGATCCACTTCAGATAC+TGG | - | chr5_4:45695876-45695895 | None:intergenic | 45.0% | |
! | TCTGAAGTGGATCAAGCAGA+AGG | + | chr5_4:45695879-45695898 | Msa0853750:CDS | 45.0% |
CTGAAGTGGATCAAGCAGAA+GGG | + | chr5_4:45695880-45695899 | Msa0853750:CDS | 45.0% | |
!! | TTTCTGGGATCATGGCATCC+AGG | + | chr5_4:45690558-45690577 | Msa0853750:CDS | 50.0% |
!! | TTCTGGGATCATGGCATCCA+GGG | + | chr5_4:45690559-45690578 | Msa0853750:CDS | 50.0% |
! | CCACAGCGGATAATTTTCCC+TGG | - | chr5_4:45690579-45690598 | None:intergenic | 50.0% |
CCAGGGAAAATTATCCGCTG+TGG | + | chr5_4:45690576-45690595 | Msa0853750:CDS | 50.0% | |
GGAAAATTATCCGCTGTGGG+AGG | + | chr5_4:45690580-45690599 | Msa0853750:CDS | 50.0% | |
! | TATCAGGATGCTTGGTGGGA+AGG | + | chr5_4:45690813-45690832 | Msa0853750:CDS | 50.0% |
GTGATATTCGATCGCTGCGA+TGG | + | chr5_4:45690837-45690856 | Msa0853750:CDS | 50.0% | |
GCTGCGATGGAATGAAGGAT+AGG | + | chr5_4:45690850-45690869 | Msa0853750:CDS | 50.0% | |
GGCGAACTTCGCTTAATGTG+AGG | - | chr5_4:45691166-45691185 | None:intergenic | 50.0% | |
TCAGATTCCCCATCCACCAA+AGG | - | chr5_4:45691380-45691399 | None:intergenic | 50.0% | |
GATGTAGGAGCAAGACGGTT+CGG | + | chr5_4:45691603-45691622 | Msa0853750:CDS | 50.0% | |
ATGTAGGAGCAAGACGGTTC+GGG | + | chr5_4:45691604-45691623 | Msa0853750:CDS | 50.0% | |
CTCCTCCACATAGACGATAC+CGG | + | chr5_4:45691699-45691718 | Msa0853750:CDS | 50.0% | |
TACCGGTATCGTCTATGTGG+AGG | - | chr5_4:45691704-45691723 | None:intergenic | 50.0% | |
ACGATACCGGTACAAGTCTC+CGG | + | chr5_4:45691712-45691731 | Msa0853750:CDS | 50.0% | |
AAACCTTGGCTCATTTGGGG+TGG | - | chr5_4:45691860-45691879 | None:intergenic | 50.0% | |
CGTCGAAACCTTGGCTCATT+TGG | - | chr5_4:45691865-45691884 | None:intergenic | 50.0% | |
GAGGACAAACGTCGAAACCT+TGG | - | chr5_4:45691874-45691893 | None:intergenic | 50.0% | |
! | GGAGAAGGTTCATTGGTTGG+AGG | - | chr5_4:45691893-45691912 | None:intergenic | 50.0% |
TTGACCACCCAACTGAGAGA+AGG | + | chr5_4:45692053-45692072 | Msa0853750:CDS | 50.0% | |
TCTTCCTTCTCTCAGTTGGG+TGG | - | chr5_4:45692060-45692079 | None:intergenic | 50.0% | |
CGTAGGAGAGTTTCCTCCTT+CGG | - | chr5_4:45692479-45692498 | None:intergenic | 50.0% | |
ACTCTCCTACGTTTGAAGGG+AGG | + | chr5_4:45692488-45692507 | Msa0853750:CDS | 50.0% | |
AGTTACTGCTTCCACCAGCA+TGG | - | chr5_4:45692579-45692598 | None:intergenic | 50.0% | |
TTTATGCGACCAATGCCCCT+CGG | + | chr5_4:45692771-45692790 | Msa0853750:CDS | 50.0% | |
!! | TTTTGTCCATCGTGCCGTTG+CGG | + | chr5_4:45692984-45693003 | Msa0853750:CDS | 50.0% |
TCTGTGGAGAAGACTGCGAA+CGG | + | chr5_4:45693259-45693278 | Msa0853750:CDS | 50.0% | |
! | TACGCGTATGCACTTTTCGC+AGG | + | chr5_4:45693698-45693717 | Msa0853750:intron | 50.0% |
!! | AAAGCCAGTTTTAGTGGGGG+CGG | + | chr5_4:45693749-45693768 | Msa0853750:CDS | 50.0% |
!! | AACTCTGAGACTTGCGGTGT+TGG | + | chr5_4:45693804-45693823 | Msa0853750:CDS | 50.0% |
CTCTAGCAGAGATATCGTGG+AGG | + | chr5_4:45693923-45693942 | Msa0853750:CDS | 50.0% | |
GAAGCTAAAGCAACTGGGAG+TGG | + | chr5_4:45695387-45695406 | Msa0853750:intron | 50.0% | |
TGACGGTTCCTTGAAAGTCC+AGG | - | chr5_4:45695522-45695541 | None:intergenic | 50.0% | |
! | GTTACAACCGATTCCGGAGA+TGG | - | chr5_4:45695571-45695590 | None:intergenic | 50.0% |
CCGGAATCGGTTGTAACAAG+AGG | + | chr5_4:45695574-45695593 | Msa0853750:intron | 50.0% | |
! | GGCTAGTCCAGTATCTGAAG+TGG | + | chr5_4:45695866-45695885 | Msa0853750:CDS | 50.0% |
GTGGATCAAGCAGAAGGGAT+TGG | + | chr5_4:45695885-45695904 | Msa0853750:CDS | 50.0% | |
! | GCAGAAGGGATTGGCAAAAG+AGG | + | chr5_4:45695894-45695913 | Msa0853750:CDS | 50.0% |
! | GAGGCGGTAACGGTCTAATC+AGG | - | chr5_4:45690740-45690759 | None:intergenic | 55.0% |
CGATCGCTGCGATGGAATGA+AGG | + | chr5_4:45690845-45690864 | Msa0853750:CDS | 55.0% | |
!! | CGCCGACTCCTCAAACTTGT+TGG | + | chr5_4:45691319-45691338 | Msa0853750:CDS | 55.0% |
GGTGGATGGGGAATCTGAGA+AGG | + | chr5_4:45691382-45691401 | Msa0853750:CDS | 55.0% | |
GGTGGCCCAGAGTTCATGTT+AGG | - | chr5_4:45691800-45691819 | None:intergenic | 55.0% | |
GATCCACCCCAAATGAGCCA+AGG | + | chr5_4:45691854-45691873 | Msa0853750:CDS | 55.0% | |
GAAGGGAGGATAACTCGCGA+AGG | + | chr5_4:45692502-45692521 | Msa0853750:CDS | 55.0% | |
AGCGGCTTTGCAAACCATGC+TGG | + | chr5_4:45692562-45692581 | Msa0853750:CDS | 55.0% | |
GGCTTTGCAAACCATGCTGG+TGG | + | chr5_4:45692565-45692584 | Msa0853750:CDS | 55.0% | |
CTGGTGGAAGCAGTAACTGC+AGG | + | chr5_4:45692581-45692600 | Msa0853750:CDS | 55.0% | |
! | TATGATACGCCGAGGGGCAT+TGG | - | chr5_4:45692783-45692802 | None:intergenic | 55.0% |
! | CATGTGTAGGGCATCCCTGA+TGG | + | chr5_4:45692954-45692973 | Msa0853750:intron | 55.0% |
! | AGGGCATCCCTGATGGTGAT+TGG | + | chr5_4:45692961-45692980 | Msa0853750:intron | 55.0% |
! | TTTGTCCATCGTGCCGTTGC+GGG | + | chr5_4:45692985-45693004 | Msa0853750:CDS | 55.0% |
TTTGGCCGCAAATCCCGCAA+CGG | - | chr5_4:45693001-45693020 | None:intergenic | 55.0% | |
CTGTGGAGAAGACTGCGAAC+GGG | + | chr5_4:45693260-45693279 | Msa0853750:CDS | 55.0% | |
TTGTCCGCCCCCACTAAAAC+TGG | - | chr5_4:45693756-45693775 | None:intergenic | 55.0% | |
TGGGGGCGGACAATCTAACT+TGG | + | chr5_4:45693763-45693782 | Msa0853750:CDS | 55.0% | |
! | TCTGAGACTTGCGGTGTTGG+TGG | + | chr5_4:45693807-45693826 | Msa0853750:CDS | 55.0% |
CGATTGAGCTCAGACCTACG+AGG | - | chr5_4:45694812-45694831 | None:intergenic | 55.0% | |
!! | ATAGCAGAAGTGCCCCTCGT+AGG | + | chr5_4:45695026-45695045 | Msa0853750:CDS | 55.0% |
!! | CTAGTCTTGCCTGCTGTTCC+CGG | + | chr5_4:45695415-45695434 | Msa0853750:CDS | 55.0% |
TTCCCGGTGTGCTAGACACA+TGG | + | chr5_4:45695431-45695450 | Msa0853750:intron | 55.0% | |
GTCCATGTGTCTAGCACACC+GGG | - | chr5_4:45695436-45695455 | None:intergenic | 55.0% | |
CGTCCATGTGTCTAGCACAC+CGG | - | chr5_4:45695437-45695456 | None:intergenic | 55.0% | |
AACGCGTCTTCCTCCCACAG+CGG | - | chr5_4:45690593-45690612 | None:intergenic | 60.0% | |
! | GAGGAGTCGGCGTTTTCCTC+AGG | - | chr5_4:45691311-45691330 | None:intergenic | 60.0% |
CAAATCCCGCAACGGCACGA+TGG | - | chr5_4:45692993-45693012 | None:intergenic | 60.0% | |
! | TCGTGCCGTTGCGGGATTTG+CGG | + | chr5_4:45692993-45693012 | Msa0853750:CDS | 60.0% |
TCTAGCACACCGGGAACAGC+AGG | - | chr5_4:45695427-45695446 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 45689898 | 45695950 | 45689898 | ID=Msa0853750;Name=Msa0853750 |
chr5_4 | mRNA | 45689898 | 45695950 | 45689898 | ID=Msa0853750-mRNA-1;Parent=Msa0853750;Name=Msa0853750-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|0.88|0.75|0.77|9|0|1100 |
chr5_4 | exon | 45689898 | 45689990 | 45689898 | ID=Msa0853750-mRNA-1:exon:14417;Parent=Msa0853750-mRNA-1 |
chr5_4 | exon | 45690444 | 45692822 | 45690444 | ID=Msa0853750-mRNA-1:exon:14418;Parent=Msa0853750-mRNA-1 |
chr5_4 | exon | 45692963 | 45693080 | 45692963 | ID=Msa0853750-mRNA-1:exon:14419;Parent=Msa0853750-mRNA-1 |
chr5_4 | exon | 45693196 | 45693281 | 45693196 | ID=Msa0853750-mRNA-1:exon:14420;Parent=Msa0853750-mRNA-1 |
chr5_4 | exon | 45693720 | 45693964 | 45693720 | ID=Msa0853750-mRNA-1:exon:14421;Parent=Msa0853750-mRNA-1 |
chr5_4 | exon | 45694817 | 45694903 | 45694817 | ID=Msa0853750-mRNA-1:exon:14422;Parent=Msa0853750-mRNA-1 |
chr5_4 | exon | 45695010 | 45695109 | 45695010 | ID=Msa0853750-mRNA-1:exon:14423;Parent=Msa0853750-mRNA-1 |
chr5_4 | exon | 45695388 | 45695436 | 45695388 | ID=Msa0853750-mRNA-1:exon:14424;Parent=Msa0853750-mRNA-1 |
chr5_4 | exon | 45695805 | 45695950 | 45695805 | ID=Msa0853750-mRNA-1:exon:14425;Parent=Msa0853750-mRNA-1 |
chr5_4 | CDS | 45689898 | 45689990 | 45689898 | ID=Msa0853750-mRNA-1:cds;Parent=Msa0853750-mRNA-1 |
chr5_4 | CDS | 45690444 | 45692822 | 45690444 | ID=Msa0853750-mRNA-1:cds;Parent=Msa0853750-mRNA-1 |
chr5_4 | CDS | 45692963 | 45693080 | 45692963 | ID=Msa0853750-mRNA-1:cds;Parent=Msa0853750-mRNA-1 |
chr5_4 | CDS | 45693196 | 45693281 | 45693196 | ID=Msa0853750-mRNA-1:cds;Parent=Msa0853750-mRNA-1 |
chr5_4 | CDS | 45693720 | 45693964 | 45693720 | ID=Msa0853750-mRNA-1:cds;Parent=Msa0853750-mRNA-1 |
chr5_4 | CDS | 45694817 | 45694903 | 45694817 | ID=Msa0853750-mRNA-1:cds;Parent=Msa0853750-mRNA-1 |
chr5_4 | CDS | 45695010 | 45695109 | 45695010 | ID=Msa0853750-mRNA-1:cds;Parent=Msa0853750-mRNA-1 |
chr5_4 | CDS | 45695388 | 45695436 | 45695388 | ID=Msa0853750-mRNA-1:cds;Parent=Msa0853750-mRNA-1 |
chr5_4 | CDS | 45695805 | 45695950 | 45695805 | ID=Msa0853750-mRNA-1:cds;Parent=Msa0853750-mRNA-1 |
Gene Sequence |
Protein sequence |