AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0856460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0856460 MtrunA17_Chr7g0220341 55.598 259 87 6 1 233 19 275 4.31e-90 266
Msa0856460 MtrunA17_Chr5g0434931 56.471 255 85 4 1 230 29 282 6.22e-87 259
Msa0856460 MtrunA17_Chr7g0228991 54.864 257 86 6 1 232 23 274 1.05e-82 248
Msa0856460 MtrunA17_Chr8g0360111 52.846 246 100 5 1 233 19 261 2.33e-77 234
Msa0856460 MtrunA17_Chr5g0434861 88.430 121 14 0 114 234 1 121 1.20e-74 222
Msa0856460 MtrunA17_Chr5g0434911 48.864 264 93 10 3 232 17 272 6.32e-62 195
Msa0856460 MtrunA17_Chr5g0434841 39.355 310 96 9 1 228 14 313 2.61e-53 174
Msa0856460 MtrunA17_Chr5g0434831 86.747 83 11 0 1 83 1 83 1.49e-47 155
Msa0856460 MtrunA17_Chr7g0229101 45.972 211 93 7 39 233 4 209 4.70e-43 144
Msa0856460 MtrunA17_Chr7g0240821 79.452 73 15 0 11 83 5 77 8.27e-36 126
Msa0856460 MtrunA17_Chr3g0121241 61.538 78 30 0 6 83 41 118 4.71e-29 110
Msa0856460 MtrunA17_Chr4g0070641 64.103 78 28 0 6 83 11 88 9.96e-29 106
Msa0856460 MtrunA17_Chr4g0070611 64.103 78 28 0 6 83 11 88 1.12e-28 110
Msa0856460 MtrunA17_Chr4g0055981 62.338 77 29 0 7 83 55 131 2.59e-28 107
Msa0856460 MtrunA17_Chr5g0395221 57.692 78 33 0 6 83 11 88 2.16e-27 100
Msa0856460 MtrunA17_Chr7g0274581 47.059 102 54 0 6 107 11 112 1.54e-26 102
Msa0856460 MtrunA17_Chr4g0022911 54.878 82 37 0 2 83 8 89 2.68e-26 103
Msa0856460 MtrunA17_Chr4g0022901 56.098 82 36 0 2 83 8 89 3.34e-26 102
Msa0856460 MtrunA17_Chr8g0343831 62.667 75 28 0 9 83 10 84 4.21e-26 102
Msa0856460 MtrunA17_Chr4g0022931 56.098 82 36 0 2 83 8 89 4.87e-26 102
Msa0856460 MtrunA17_Chr1g0187761 46.078 102 55 0 6 107 11 112 5.56e-26 101
Msa0856460 MtrunA17_Chr8g0346561 57.692 78 33 0 6 83 11 88 1.64e-25 101
Msa0856460 MtrunA17_Chr2g0323351 39.333 150 81 1 6 145 11 160 1.70e-25 100
Msa0856460 MtrunA17_Chr1g0167691 44.660 103 57 0 5 107 10 112 3.21e-25 99.8
Msa0856460 MtrunA17_Chr4g0042611 57.317 82 34 1 2 83 8 88 3.44e-25 94.7
Msa0856460 MtrunA17_Chr7g0275911 56.410 78 34 0 6 83 11 88 3.63e-25 99.4
Msa0856460 MtrunA17_Chr5g0435101 59.740 77 31 0 7 83 11 87 4.88e-25 98.2
Msa0856460 MtrunA17_Chr4g0048511 54.878 82 37 0 2 83 8 89 7.33e-25 100
Msa0856460 MtrunA17_Chr3g0115821 56.410 78 34 0 6 83 11 88 9.84e-25 100
Msa0856460 MtrunA17_Chr5g0395281 55.128 78 35 0 6 83 11 88 1.13e-24 99.4
Msa0856460 MtrunA17_Chr7g0261281 47.059 102 54 0 6 107 11 112 1.67e-24 98.2
Msa0856460 MtrunA17_Chr2g0281071 54.878 82 37 0 2 83 8 89 1.75e-24 99.4
Msa0856460 MtrunA17_Chr5g0410961 56.410 78 34 0 6 83 11 88 2.22e-24 99.0
Msa0856460 MtrunA17_Chr7g0217221 40.741 135 75 2 6 140 11 140 2.75e-24 97.4
Msa0856460 MtrunA17_Chr1g0167661 43.689 103 58 0 5 107 10 112 3.55e-24 97.1
Msa0856460 MtrunA17_Chr4g0042671 47.059 102 54 0 6 107 11 112 3.96e-24 99.4
Msa0856460 MtrunA17_Chr2g0323321 53.086 81 38 0 6 86 10 90 4.30e-24 92.8
Msa0856460 MtrunA17_Chr4g0039971 55.128 78 35 0 6 83 12 89 4.53e-24 98.6
Msa0856460 MtrunA17_Chr5g0434901 97.674 43 1 0 41 83 7 49 9.86e-24 92.0
Msa0856460 MtrunA17_Chr6g0453471 56.410 78 34 0 6 83 11 88 1.27e-23 97.1
Msa0856460 MtrunA17_Chr7g0270891 55.844 77 34 0 7 83 12 88 1.27e-23 97.4
Msa0856460 MtrunA17_Chr1g0193801 55.844 77 34 0 7 83 12 88 1.75e-23 97.4
Msa0856460 MtrunA17_Chr1g0203411 55.128 78 35 0 6 83 11 88 2.04e-23 95.5
Msa0856460 MtrunA17_Chr5g0434881 95.122 41 2 0 1 41 1 41 2.31e-23 89.0
Msa0856460 MtrunA17_Chr7g0229131 40.385 156 71 4 39 178 4 153 3.45e-23 92.0
Msa0856460 MtrunA17_Chr1g0209661 34.286 175 102 2 7 175 27 194 4.37e-23 95.1
Msa0856460 MtrunA17_Chr2g0294811 47.778 90 45 1 6 93 11 100 4.62e-23 90.5
Msa0856460 MtrunA17_Chr5g0417821 50.602 83 41 0 1 83 1 83 4.89e-23 94.4
Msa0856460 MtrunA17_Chr6g0453211 55.128 78 35 0 6 83 11 88 5.73e-23 94.7
Msa0856460 MtrunA17_Chr7g0271241 57.143 77 33 0 7 83 12 88 6.67e-23 95.5
Msa0856460 MtrunA17_Chr8g0342531 50.000 84 41 1 7 90 12 94 7.63e-23 91.3
Msa0856460 MtrunA17_Chr4g0060721 55.128 78 35 0 6 83 12 89 7.69e-23 94.7
Msa0856460 MtrunA17_Chr4g0068061 39.259 135 79 1 6 140 11 142 8.53e-23 94.7
Msa0856460 MtrunA17_Chr7g0217741 53.846 78 36 0 6 83 11 88 8.58e-23 94.4
Msa0856460 MtrunA17_Chr7g0254411 53.846 78 36 0 6 83 11 88 1.53e-22 94.0
Msa0856460 MtrunA17_Chr4g0058631 54.545 77 35 0 7 83 12 88 1.80e-22 94.0
Msa0856460 MtrunA17_Chr1g0193371 54.545 77 35 0 7 83 12 88 2.10e-22 94.0
Msa0856460 MtrunA17_Chr3g0092401 55.128 78 35 0 6 83 12 89 2.58e-22 92.8
Msa0856460 MtrunA17_Chr4g0037141 56.000 75 33 0 9 83 14 88 2.99e-22 92.4
Msa0856460 MtrunA17_Chr3g0080861 51.948 77 37 0 7 83 37 113 4.44e-22 94.4
Msa0856460 MtrunA17_Chr8g0342541 51.899 79 38 0 5 83 10 88 4.47e-22 92.8
Msa0856460 MtrunA17_Chr4g0022881 42.056 107 62 0 6 112 11 117 6.51e-22 90.5
Msa0856460 MtrunA17_Chr4g0044421 57.333 75 32 0 9 83 14 88 6.59e-22 89.4
Msa0856460 MtrunA17_Chr3g0131121 47.475 99 52 0 9 107 14 112 9.22e-22 91.3
Msa0856460 MtrunA17_Chr1g0186061 47.475 99 52 0 8 106 21 119 1.07e-21 90.5
Msa0856460 MtrunA17_Chr8g0342511 52.632 76 36 0 7 82 12 87 1.22e-21 85.9
Msa0856460 MtrunA17_Chr3g0099141 49.351 77 39 0 7 83 40 116 1.74e-21 87.0
Msa0856460 MtrunA17_Chr2g0330041 50.633 79 39 0 5 83 10 88 2.18e-21 91.7
Msa0856460 MtrunA17_Chr2g0323411 44.118 102 57 0 6 107 11 112 2.24e-21 90.5
Msa0856460 MtrunA17_Chr1g0211161 54.545 77 35 0 7 83 13 89 2.98e-21 88.6
Msa0856460 MtrunA17_Chr4g0022891 50.000 78 39 0 6 83 11 88 3.04e-21 89.0
Msa0856460 MtrunA17_Chr8g0342521 50.633 79 39 0 5 83 10 88 3.19e-21 90.5
Msa0856460 MtrunA17_Chr3g0117091 54.545 77 35 0 7 83 12 88 3.29e-21 90.5
Msa0856460 MtrunA17_Chr4g0032401 53.247 77 36 0 7 83 17 93 3.76e-21 90.1
Msa0856460 MtrunA17_Chr3g0099131 49.351 77 39 0 7 83 41 117 4.72e-21 91.3
Msa0856460 MtrunA17_Chr8g0349261 53.165 79 36 1 6 83 12 90 4.78e-21 89.4
Msa0856460 MtrunA17_Chr2g0328771 51.948 77 37 0 7 83 20 96 5.12e-21 89.7
Msa0856460 MtrunA17_Chr8g0342461 42.520 127 59 5 9 131 14 130 8.02e-21 85.1
Msa0856460 MtrunA17_Chr2g0311221 48.052 77 40 0 7 83 14 90 9.38e-21 89.0
Msa0856460 MtrunA17_Chr1g0168661 42.241 116 66 1 8 122 22 137 2.26e-20 86.7
Msa0856460 MtrunA17_Chr1g0194951 41.284 109 59 1 6 109 11 119 2.81e-20 88.2
Msa0856460 MtrunA17_Chr8g0387421 49.351 77 39 0 7 83 12 88 2.95e-20 87.4
Msa0856460 MtrunA17_Chr7g0228891 53.846 78 36 0 6 83 11 88 6.03e-20 85.9
Msa0856460 MtrunA17_Chr1g0203441 51.190 84 40 1 1 83 6 89 6.28e-20 85.9
Msa0856460 MtrunA17_Chr3g0088461 52.564 78 35 2 7 83 22 98 6.45e-20 87.0
Msa0856460 MtrunA17_Chr8g0342471 39.695 131 65 5 9 135 14 134 7.59e-20 82.4
Msa0856460 MtrunA17_Chr8g0385321 50.667 75 37 0 9 83 14 88 1.08e-19 85.9
Msa0856460 MtrunA17_Chr6g0452271 46.753 77 41 0 7 83 12 88 1.18e-19 85.9
Msa0856460 MtrunA17_Chr5g0397231 48.052 77 40 0 7 83 12 88 1.20e-19 85.9
Msa0856460 MtrunA17_Chr8g0354661 49.351 77 39 0 7 83 37 113 1.63e-19 86.7
Msa0856460 MtrunA17_Chr6g0450101 41.441 111 61 1 7 113 14 124 1.77e-19 83.2
Msa0856460 MtrunA17_Chr1g0194291 50.000 82 41 0 2 83 16 97 1.79e-19 84.3
Msa0856460 MtrunA17_Chr1g0154031 48.052 77 40 0 7 83 76 152 2.41e-19 85.9
Msa0856460 MtrunA17_Chr7g0228231 49.351 77 39 0 7 83 14 90 2.50e-19 82.8
Msa0856460 MtrunA17_Chr3g0103281 46.753 77 41 0 7 83 12 88 2.74e-19 84.7
Msa0856460 MtrunA17_Chr2g0322521 51.282 78 38 0 6 83 28 105 3.32e-19 85.5
Msa0856460 MtrunA17_Chr3g0135311 51.282 78 37 1 7 83 12 89 4.46e-19 84.7
Msa0856460 MtrunA17_Chr2g0309911 48.052 77 40 0 7 83 11 87 4.62e-19 84.0
Msa0856460 MtrunA17_Chr8g0342481 51.282 78 37 1 7 83 12 89 4.69e-19 85.1
Msa0856460 MtrunA17_Chr5g0400821 51.282 78 37 1 7 83 12 89 5.90e-19 84.0
Msa0856460 MtrunA17_Chr4g0054391 50.000 78 38 1 7 83 12 89 6.78e-19 83.2
Msa0856460 MtrunA17_Chr1g0192411 47.500 80 42 0 4 83 9 88 8.25e-19 84.3
Msa0856460 MtrunA17_Chr6g0487491 28.947 190 125 3 7 186 12 201 8.82e-19 82.4
Msa0856460 MtrunA17_Chr5g0425591 45.455 77 42 0 8 84 10 86 9.93e-19 78.2
Msa0856460 MtrunA17_Chr2g0327351 51.282 78 37 1 7 83 12 89 1.11e-18 83.2
Msa0856460 MtrunA17_Chr3g0110351 53.846 78 36 0 6 83 11 88 1.26e-18 82.8
Msa0856460 MtrunA17_Chr1g0152011 48.718 78 39 1 7 83 12 89 1.39e-18 83.2
Msa0856460 MtrunA17_Chr4g0057031 51.282 78 38 0 6 83 11 88 1.62e-18 82.0
Msa0856460 MtrunA17_Chr5g0440781 45.455 77 42 0 8 84 13 89 1.97e-18 80.1
Msa0856460 MtrunA17_Chr1g0194301 47.561 82 43 0 2 83 28 109 3.48e-18 81.3
Msa0856460 MtrunA17_Chr5g0441141 45.455 77 42 0 8 84 13 89 3.55e-18 81.3
Msa0856460 MtrunA17_Chr5g0440761 45.455 77 42 0 8 84 13 89 3.64e-18 80.9
Msa0856460 MtrunA17_Chr4g0072751 50.000 78 38 1 7 83 12 89 4.18e-18 82.0
Msa0856460 MtrunA17_Chr5g0434571 52.564 78 37 0 6 83 47 124 5.94e-18 81.6
Msa0856460 MtrunA17_Chr1g0151941 44.872 78 42 1 7 83 12 89 6.35e-18 80.1
Msa0856460 MtrunA17_Chr6g0470971 50.000 76 38 0 8 83 15 90 8.33e-18 80.1
Msa0856460 MtrunA17_Chr7g0264641 48.718 78 39 1 7 83 12 89 9.19e-18 80.1
Msa0856460 MtrunA17_Chr4g0028311 48.718 78 39 1 7 83 12 89 3.07e-17 79.3
Msa0856460 MtrunA17_Chr1g0180391 28.205 234 140 4 7 233 19 231 3.33e-17 77.8
Msa0856460 MtrunA17_Chr6g0453751 43.182 88 42 1 5 84 18 105 1.38e-16 73.6
Msa0856460 MtrunA17_Chr2g0327821 36.066 122 73 2 7 127 6 123 1.84e-16 75.9
Msa0856460 MtrunA17_Chr7g0269831 47.436 78 41 0 6 83 11 88 2.55e-16 77.0
Msa0856460 MtrunA17_Chr4g0068921 49.351 77 39 0 7 83 24 100 1.45e-15 72.4
Msa0856460 MtrunA17_Chr2g0293911 49.351 77 39 0 7 83 24 100 1.59e-15 74.3
Msa0856460 MtrunA17_Chr5g0441131 40.260 77 46 0 8 84 10 86 5.47e-15 70.9
Msa0856460 MtrunA17_Chr4g0053431 42.667 75 42 1 9 83 5 78 1.13e-14 71.2
Msa0856460 MtrunA17_Chr5g0401731 40.000 75 44 1 9 83 15 88 2.51e-14 70.9
Msa0856460 MtrunA17_Chr5g0429661 40.244 82 48 1 2 83 115 195 6.01e-14 70.1
Msa0856460 MtrunA17_Chr4g0030881 34.579 107 63 1 8 107 8 114 6.93e-14 68.9
Msa0856460 MtrunA17_Chr7g0238651 47.297 74 37 1 12 83 10 83 7.28e-14 69.7
Msa0856460 MtrunA17_Chr4g0008551 40.000 75 44 1 9 83 38 111 4.29e-13 67.8
Msa0856460 MtrunA17_Chr6g0460661 42.667 75 42 1 9 83 16 89 4.56e-13 65.1
Msa0856460 MtrunA17_Chr5g0417621 38.667 75 45 1 9 83 134 207 2.18e-12 65.9
Msa0856460 MtrunA17_Chr3g0133601 40.000 75 44 1 9 83 37 110 2.71e-12 63.9
Msa0856460 MtrunA17_Chr7g0228531 40.000 75 43 2 9 83 220 292 3.78e-12 65.1
Msa0856460 MtrunA17_Chr4g0013361 39.286 84 49 2 2 83 4 87 4.10e-12 64.3
Msa0856460 MtrunA17_Chr6g0454921 38.667 75 45 1 9 83 15 88 4.18e-12 63.2
Msa0856460 MtrunA17_Chr1g0157731 28.986 138 88 3 7 139 89 221 4.35e-12 65.5
Msa0856460 MtrunA17_Chr8g0334881 39.744 78 46 1 7 83 10 87 4.39e-12 64.7
Msa0856460 MtrunA17_Chr4g0042501 37.333 75 46 1 9 83 105 178 5.00e-12 64.7
Msa0856460 MtrunA17_Chr4g0058991 37.349 83 49 2 2 83 202 282 5.92e-12 64.7
Msa0856460 MtrunA17_Chr3g0117511 36.905 84 50 2 1 83 175 256 8.28e-12 64.3
Msa0856460 MtrunA17_Chr7g0247131 57.778 45 19 0 39 83 10 54 9.91e-12 63.2
Msa0856460 MtrunA17_Chr3g0139671 37.662 77 47 1 7 83 83 158 1.02e-11 64.3
Msa0856460 MtrunA17_Chr1g0193901 47.368 57 29 1 7 62 11 67 1.51e-11 59.7
Msa0856460 MtrunA17_Chr1g0193891 47.368 57 29 1 7 62 11 67 1.51e-11 59.7
Msa0856460 MtrunA17_Chr1g0193871 47.368 57 29 1 7 62 11 67 1.51e-11 59.7
Msa0856460 MtrunA17_Chr1g0193881 47.368 57 29 1 7 62 11 67 1.51e-11 59.7
Msa0856460 MtrunA17_Chr6g0480581 37.333 75 46 1 9 83 4 77 2.66e-11 61.6
Msa0856460 MtrunA17_Chr7g0254261 32.886 149 86 5 9 145 89 235 8.03e-11 60.8
Msa0856460 MtrunA17_Chr7g0238631 37.662 77 47 1 7 83 111 186 9.40e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0856460 AT1G66370.1 73.171 82 22 0 2 83 3 84 5.50e-37 130
Msa0856460 AT1G66380.2 65.455 110 34 3 4 113 5 110 1.20e-35 122
Msa0856460 AT1G66380.1 51.825 137 60 1 4 140 5 135 8.11e-34 119
Msa0856460 AT1G56650.1 59.091 110 45 0 4 113 5 114 1.46e-31 116
Msa0856460 AT1G66390.1 50.694 144 55 2 4 131 5 148 1.95e-31 116
Msa0856460 AT5G14750.1 57.895 76 32 0 8 83 17 92 5.58e-28 105
Msa0856460 AT3G13540.1 58.974 78 32 0 6 83 22 99 1.16e-27 106
Msa0856460 AT5G40330.1 55.263 76 34 0 8 83 13 88 1.38e-26 102
Msa0856460 AT1G74080.1 55.556 81 36 0 3 83 8 88 8.71e-26 103
Msa0856460 AT5G16770.4 58.974 78 32 0 6 83 11 88 1.07e-25 102
Msa0856460 AT5G16770.3 58.974 78 32 0 6 83 11 88 1.07e-25 102
Msa0856460 AT5G16770.1 58.974 78 32 0 6 83 11 88 1.51e-25 102
Msa0856460 AT5G16770.2 58.974 78 32 0 6 83 11 88 1.51e-25 102
Msa0856460 AT5G60890.1 54.321 81 37 0 3 83 8 88 6.83e-25 100
Msa0856460 AT3G27920.1 53.947 76 35 0 8 83 15 90 9.09e-25 98.2
Msa0856460 AT5G52600.1 47.059 102 54 0 7 108 12 113 9.52e-25 97.4
Msa0856460 AT3G61250.1 47.059 102 54 0 6 107 11 112 1.64e-24 99.0
Msa0856460 AT3G23250.1 45.098 102 56 0 6 107 11 112 1.93e-24 98.6
Msa0856460 AT5G35550.1 58.442 77 32 0 7 83 14 90 2.13e-24 97.8
Msa0856460 AT3G02940.2 56.410 78 34 0 6 83 11 88 2.33e-24 99.0
Msa0856460 AT3G02940.1 56.410 78 34 0 6 83 11 88 3.55e-24 98.6
Msa0856460 AT3G02940.3 56.410 78 34 0 6 83 11 88 3.55e-24 98.6
Msa0856460 AT5G07690.1 41.538 130 72 1 5 134 10 135 3.77e-24 98.6
Msa0856460 AT5G61420.2 56.410 78 34 0 6 83 11 88 3.81e-24 99.4
Msa0856460 AT4G01680.3 57.143 77 33 0 7 83 12 88 4.16e-24 96.7
Msa0856460 AT4G01680.1 57.143 77 33 0 7 83 12 88 4.57e-24 98.6
Msa0856460 AT3G47600.1 57.692 78 33 0 6 83 11 88 5.28e-24 98.2
Msa0856460 AT5G54230.1 45.545 101 55 0 7 107 12 112 5.76e-24 97.8
Msa0856460 AT1G22640.1 47.525 101 53 0 7 107 12 112 6.13e-24 96.7
Msa0856460 AT5G10280.1 55.128 78 35 0 6 83 11 88 8.83e-24 97.8
Msa0856460 AT3G01140.2 56.410 78 34 0 6 83 11 88 9.89e-24 97.8
Msa0856460 AT2G47460.1 35.616 146 88 2 6 146 11 155 1.00e-23 98.2
Msa0856460 AT5G15310.1 56.410 78 34 0 6 83 11 88 1.03e-23 97.4
Msa0856460 AT4G38620.1 33.908 174 95 3 9 162 14 187 1.07e-23 96.7
Msa0856460 AT1G74430.1 57.692 78 33 0 6 83 11 88 1.19e-23 96.3
Msa0856460 AT1G18570.1 56.410 78 34 0 6 83 12 89 1.21e-23 97.4
Msa0856460 AT5G15310.2 56.410 78 34 0 6 83 11 88 1.30e-23 97.1
Msa0856460 AT5G07700.1 38.667 150 79 2 6 146 11 156 1.36e-23 97.4
Msa0856460 AT5G07700.2 38.667 150 79 2 6 146 11 156 1.36e-23 97.4
Msa0856460 AT5G15310.4 56.410 78 34 0 6 83 11 88 1.98e-23 95.1
Msa0856460 AT3G01140.1 56.410 78 34 0 6 83 54 131 2.08e-23 97.4
Msa0856460 AT4G21440.1 55.128 78 35 0 6 83 11 88 2.57e-23 96.7
Msa0856460 AT5G49330.1 41.880 117 68 0 6 122 11 127 2.80e-23 96.3
Msa0856460 AT1G06180.1 46.078 102 55 0 6 107 11 112 3.99e-23 94.4
Msa0856460 AT2G32460.1 53.165 79 37 0 5 83 16 94 4.14e-23 97.4
Msa0856460 AT2G32460.2 53.165 79 37 0 5 83 4 82 4.73e-23 97.1
Msa0856460 AT2G31180.1 41.129 124 69 1 6 129 11 130 6.03e-23 94.0
Msa0856460 AT1G34670.1 55.128 78 35 0 6 83 11 88 6.14e-23 95.9
Msa0856460 AT3G30210.1 47.525 101 53 0 6 106 26 126 6.22e-23 94.4
Msa0856460 AT4G17785.1 51.220 82 40 0 2 83 8 89 1.07e-22 95.1
Msa0856460 AT4G17785.2 51.220 82 40 0 2 83 8 89 1.38e-22 94.7
Msa0856460 AT3G28910.1 56.410 78 34 0 6 83 11 88 1.50e-22 94.4
Msa0856460 AT5G62470.2 55.128 78 35 0 6 83 11 88 1.84e-22 94.4
Msa0856460 AT2G16720.1 45.545 101 55 0 7 107 12 112 1.87e-22 92.8
Msa0856460 AT4G05100.1 43.396 106 60 0 2 107 8 113 1.88e-22 94.0
Msa0856460 AT3G62610.1 41.379 116 63 1 6 116 11 126 1.97e-22 94.4
Msa0856460 AT4G34990.1 47.475 99 52 0 9 107 14 112 3.17e-22 92.4
Msa0856460 AT4G09460.1 46.465 99 53 0 9 107 14 112 3.35e-22 91.7
Msa0856460 AT1G57560.1 54.545 77 35 0 7 83 12 88 3.39e-22 93.2
Msa0856460 AT5G65230.1 46.154 104 49 1 6 109 11 107 3.52e-22 92.8
Msa0856460 AT1G57560.2 54.545 77 35 0 7 83 12 88 3.69e-22 92.4
Msa0856460 AT1G08810.1 53.846 78 36 0 6 83 11 88 4.67e-22 92.0
Msa0856460 AT5G26660.1 54.545 77 35 0 7 83 12 88 5.32e-22 93.2
Msa0856460 AT4G28110.1 50.000 78 39 0 6 83 11 88 5.75e-22 92.0
Msa0856460 AT3G13890.2 51.948 77 37 0 7 83 12 88 7.08e-22 92.8
Msa0856460 AT1G18710.1 53.846 78 36 0 6 83 11 88 7.21e-22 91.3
Msa0856460 AT1G74650.1 54.545 77 35 0 7 83 12 88 8.27e-22 92.4
Msa0856460 AT1G09540.1 53.247 77 36 0 7 83 12 88 9.98e-22 92.4
Msa0856460 AT4G13480.1 45.283 106 58 0 8 113 7 112 1.05e-21 90.9
Msa0856460 AT3G24310.1 47.525 101 53 0 6 106 17 117 1.13e-21 90.9
Msa0856460 AT5G55020.1 51.948 77 37 0 7 83 26 102 2.12e-21 92.8
Msa0856460 AT3G28470.1 48.052 77 40 0 7 83 12 88 2.21e-21 90.9
Msa0856460 AT5G12870.1 48.148 81 42 0 3 83 14 94 3.54e-21 89.7
Msa0856460 AT5G62470.1 55.128 78 34 1 6 83 11 87 6.38e-21 90.1
Msa0856460 AT4G01680.2 49.438 89 33 1 7 83 12 100 9.34e-21 89.7
Msa0856460 AT4G26930.1 49.351 77 39 0 7 83 19 95 9.90e-21 90.1
Msa0856460 AT3G01530.1 51.948 77 37 0 7 83 25 101 1.02e-20 87.0
Msa0856460 AT1G35515.1 42.574 101 58 0 7 107 12 112 1.46e-20 86.7
Msa0856460 AT2G26960.1 48.101 79 41 0 5 83 18 96 1.86e-20 89.4
Msa0856460 AT1G25340.1 55.263 76 34 0 8 83 19 94 2.23e-20 87.8
Msa0856460 AT3G08500.1 51.948 77 37 0 7 83 30 106 3.88e-20 87.8
Msa0856460 AT3G12720.1 46.753 77 41 0 7 83 22 98 1.09e-19 86.3
Msa0856460 AT2G47190.1 46.341 82 44 0 2 83 15 96 1.28e-19 85.5
Msa0856460 AT1G48000.1 53.247 77 36 0 7 83 32 108 1.45e-19 84.7
Msa0856460 AT1G68320.1 54.545 77 35 0 7 83 19 95 1.63e-19 85.5
Msa0856460 AT1G63910.1 48.052 77 40 0 7 83 12 88 2.25e-19 85.9
Msa0856460 AT3G11440.2 43.529 85 44 1 3 83 33 117 2.44e-19 86.7
Msa0856460 AT3G11440.3 43.529 85 44 1 3 83 33 117 2.52e-19 86.7
Msa0856460 AT3G11440.4 43.529 85 44 1 3 83 33 117 2.52e-19 86.7
Msa0856460 AT3G11440.1 43.529 85 44 1 3 83 33 117 2.52e-19 86.7
Msa0856460 AT5G56110.1 48.052 77 40 0 7 83 12 88 2.57e-19 85.1
Msa0856460 AT5G57620.1 53.846 78 35 1 7 83 12 89 2.79e-19 85.5
Msa0856460 AT3G48920.1 45.783 83 45 0 1 83 12 94 2.79e-19 84.3
Msa0856460 AT5G40350.1 49.351 77 39 0 7 83 17 93 3.12e-19 83.2
Msa0856460 AT1G16490.1 39.623 106 63 1 2 107 10 114 3.40e-19 84.3
Msa0856460 AT5G14340.1 35.220 159 93 4 6 156 23 179 3.56e-19 84.3
Msa0856460 AT5G06100.1 46.154 78 42 0 6 83 31 108 4.04e-19 85.9
Msa0856460 AT5G06100.5 46.154 78 42 0 6 83 31 108 4.49e-19 85.9
Msa0856460 AT5G06100.2 46.154 78 42 0 6 83 31 108 4.49e-19 85.9
Msa0856460 AT5G06100.3 46.154 78 42 0 6 83 31 108 4.49e-19 85.9
Msa0856460 AT5G06100.4 46.154 78 42 0 6 83 31 108 4.49e-19 85.9
Msa0856460 AT3G13890.1 46.512 86 37 1 7 83 12 97 5.40e-19 85.1
Msa0856460 AT3G27810.1 48.052 77 40 0 7 83 20 96 7.13e-19 82.4
Msa0856460 AT1G56160.1 41.748 103 56 2 7 107 14 114 7.32e-19 83.6
Msa0856460 AT4G37780.1 48.101 79 40 1 6 83 11 89 8.95e-19 83.6
Msa0856460 AT1G79180.1 39.604 101 61 0 7 107 14 114 1.88e-18 82.4
Msa0856460 AT3G49690.1 50.000 78 38 1 7 83 12 89 2.42e-18 82.4
Msa0856460 AT3G46130.1 38.393 112 69 0 1 112 3 114 2.45e-18 81.6
Msa0856460 AT5G62320.1 42.202 109 56 1 6 107 12 120 4.13e-18 80.9
Msa0856460 AT5G23000.1 49.398 83 40 2 2 83 8 89 4.66e-18 82.0
Msa0856460 AT5G59780.3 40.000 105 63 0 8 112 9 113 5.49e-18 80.1
Msa0856460 AT5G65790.1 50.000 78 38 1 7 83 12 89 9.28e-18 81.6
Msa0856460 AT4G25560.1 48.684 76 39 0 8 83 11 86 1.59e-17 79.7
Msa0856460 AT4G22680.1 48.718 78 40 0 6 83 11 88 1.73e-17 79.3
Msa0856460 AT3G12820.1 39.604 101 61 0 7 107 14 114 2.04e-17 79.0
Msa0856460 AT4G12350.1 33.533 167 95 3 7 159 12 176 2.70e-17 79.3
Msa0856460 AT1G25340.2 52.632 76 31 1 8 83 19 89 3.58e-17 79.0
Msa0856460 AT1G25340.3 52.632 76 31 1 8 83 19 89 5.15e-17 79.0
Msa0856460 AT2G36890.1 48.718 78 39 1 7 83 12 89 5.49e-17 78.6
Msa0856460 AT1G66230.1 50.000 78 39 0 6 83 11 88 5.98e-17 78.2
Msa0856460 AT5G16600.1 50.000 78 39 0 6 83 11 88 6.35e-17 78.6
Msa0856460 AT2G36890.2 48.718 78 39 1 7 83 53 130 6.61e-17 79.0
Msa0856460 AT5G52260.1 53.947 76 35 0 8 83 13 88 1.10e-16 77.4
Msa0856460 AT3G53200.1 38.679 106 65 0 1 106 3 108 2.14e-16 75.9
Msa0856460 AT2G26950.1 40.964 83 47 1 1 83 12 92 7.80e-16 76.3
Msa0856460 AT5G14750.3 73.171 41 11 0 43 83 18 58 3.19e-15 71.2
Msa0856460 AT3G06490.1 49.398 83 42 0 1 83 13 95 4.68e-15 73.6
Msa0856460 AT4G37260.1 42.667 75 42 1 9 83 13 86 2.02e-14 71.6
Msa0856460 AT2G37630.1 47.297 74 37 1 12 83 7 80 3.76e-14 71.2
Msa0856460 AT4G18770.1 41.975 81 46 1 3 83 211 290 5.79e-14 70.9
Msa0856460 AT5G49620.1 45.783 83 45 0 1 83 20 102 6.61e-14 70.1
Msa0856460 AT4G33450.1 32.203 118 71 3 8 125 18 126 1.21e-13 68.6
Msa0856460 AT5G11510.3 41.558 77 44 1 7 83 79 154 1.30e-13 70.1
Msa0856460 AT5G11510.1 41.558 77 44 1 7 83 79 154 1.30e-13 70.1
Msa0856460 AT5G11510.4 41.558 77 44 1 7 83 79 154 1.30e-13 70.1
Msa0856460 AT5G11510.2 41.558 77 44 1 7 83 79 154 1.90e-13 69.7
Msa0856460 AT5G11510.5 41.558 77 44 1 7 83 79 154 2.02e-13 69.7
Msa0856460 AT2G23290.1 42.667 75 42 1 9 83 13 86 2.08e-13 68.6
Msa0856460 AT5G49620.2 45.122 82 45 0 1 82 20 101 3.44e-13 68.2
Msa0856460 AT3G55730.1 41.772 79 45 1 5 83 52 129 5.56e-13 67.8
Msa0856460 AT1G66380.3 44.118 102 51 1 39 140 7 102 6.19e-13 63.5
Msa0856460 AT5G26660.2 55.102 49 22 0 35 83 9 57 8.20e-13 67.0
Msa0856460 AT5G67300.1 40.000 75 44 1 9 83 6 79 1.03e-12 66.6
Msa0856460 AT1G69560.1 38.462 78 47 1 6 83 104 180 1.25e-12 66.6
Msa0856460 AT1G26780.2 40.260 77 45 1 7 83 96 171 1.34e-12 66.6
Msa0856460 AT1G69560.2 38.462 78 47 1 6 83 120 196 1.39e-12 66.6
Msa0856460 AT5G58850.1 37.500 80 49 1 4 83 100 178 1.39e-12 66.6
Msa0856460 AT1G79180.2 29.496 139 64 2 2 107 10 147 1.55e-12 66.2
Msa0856460 AT5G11050.1 36.709 79 49 1 5 83 101 178 1.56e-12 66.6
Msa0856460 AT1G26780.1 40.260 77 45 1 7 83 96 171 2.31e-12 65.5
Msa0856460 AT5G35550.2 58.000 50 21 0 34 83 44 93 3.91e-12 64.7
Msa0856460 AT1G17950.1 38.667 75 45 1 9 83 5 78 4.93e-12 63.9
Msa0856460 AT3G27785.1 39.506 81 48 1 3 83 183 262 5.46e-12 65.1
Msa0856460 AT3G60460.1 37.805 82 50 1 3 83 7 88 6.84e-12 64.3
Msa0856460 AT3G47600.2 68.182 44 14 0 40 83 39 82 7.14e-12 64.3
Msa0856460 AT3G09230.1 41.463 82 44 2 5 83 48 128 1.09e-11 63.9
Msa0856460 AT3G09370.1 36.364 77 48 1 7 83 128 203 1.19e-11 64.3
Msa0856460 AT3G09370.2 36.364 77 48 1 7 83 133 208 1.19e-11 64.3
Msa0856460 AT3G09370.3 36.364 77 48 1 7 83 141 216 1.70e-11 63.5
Msa0856460 AT2G39880.1 35.043 117 70 2 9 120 50 165 1.92e-11 63.2
Msa0856460 AT4G32730.1 37.662 77 47 1 7 83 85 160 2.43e-11 63.5
Msa0856460 AT4G32730.5 37.662 77 47 1 7 83 85 160 2.64e-11 63.5
Msa0856460 AT4G32730.4 37.662 77 47 1 7 83 85 160 2.64e-11 63.5
Msa0856460 AT4G32730.3 37.662 77 47 1 7 83 85 160 2.64e-11 63.5
Msa0856460 AT4G32730.2 37.662 77 47 1 7 83 85 160 2.64e-11 63.5
Msa0856460 AT3G50060.1 37.333 75 46 1 9 83 6 79 2.89e-11 62.4
Msa0856460 AT5G17800.1 38.750 80 48 1 4 83 88 166 5.71e-11 61.6
Msa0856460 AT5G40360.1 36.364 77 48 1 7 83 156 231 8.19e-11 61.2
Msa0856460 AT5G02320.1 35.065 77 49 1 7 83 125 200 9.51e-11 61.6
Msa0856460 AT5G02320.2 35.065 77 49 1 7 83 125 200 9.51e-11 61.6

Find 52 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATGTGGTCGGACAATTTA+TGG 0.135481 5_4:+51181782 Msa0856460:CDS
TTAAGGTTACACAAACTTCT+AGG 0.243759 5_4:+51181100 Msa0856460:CDS
CACAAAATTAACATGTTTCC+TGG 0.270361 5_4:-51181554 None:intergenic
TTGTGATTTCGATTCTCTTT+GGG 0.292312 5_4:+51181918 Msa0856460:CDS
TTTGTGATTTCGATTCTCTT+TGG 0.302430 5_4:+51181917 Msa0856460:CDS
ACAAGAGGAGAACTTTAATA+TGG 0.311459 5_4:+51181855 Msa0856460:CDS
GTCTCGATCATCGTGATCTT+TGG 0.324862 5_4:-51181680 None:intergenic
AGAAGTATGGTGAAGGAAAA+TGG 0.332221 5_4:+51177544 Msa0856460:CDS
ACTATGGTTACATTTCAAAA+TGG 0.347293 5_4:+51181703 Msa0856460:CDS
CGCAAAATTAACATGTTTCG+TGG 0.375575 5_4:-51181617 None:intergenic
ACCACATTGAACACGGTATT+GGG 0.379482 5_4:-51181768 None:intergenic
ATTTATGTCCCAACATCAAA+AGG 0.381505 5_4:+51181044 Msa0856460:CDS
CAATTAGGCAGTGAGAAAAT+TGG 0.383718 5_4:+51181817 Msa0856460:CDS
ATAAAGATGGTAATGTTTCC+AGG 0.407114 5_4:+51181536 Msa0856460:CDS
GACCACATTGAACACGGTAT+TGG 0.408131 5_4:-51181769 None:intergenic
GTCGGACAATTTATGGAACT+TGG 0.410228 5_4:+51181789 Msa0856460:CDS
ATGAAGTTGATATGATCTTA+AGG 0.415800 5_4:+51181083 Msa0856460:CDS
TTAACTTGGCAGGATTGAAT+AGG 0.416395 5_4:+51180987 Msa0856460:intron
AAGGCTTGTATACAGAAGTA+TGG 0.446225 5_4:+51177531 Msa0856460:CDS
TAGATGTTGATGACTCCCTT+TGG 0.464675 5_4:+51181884 Msa0856460:CDS
TCACGATGATCGAGACACTA+TGG 0.465379 5_4:+51181687 Msa0856460:CDS
CATTTAGTTTCTCAAAGAGC+AGG 0.495360 5_4:+51177567 Msa0856460:CDS
TACACAAACTTCTAGGGAAT+AGG 0.496324 5_4:+51181107 Msa0856460:CDS
AAGACTAGAGGTTTGAGAAA+AGG 0.501120 5_4:+51177477 Msa0856460:CDS
TCTTTATTCGAAGCCAGCAT+TGG 0.514033 5_4:-51181583 None:intergenic
TCTTTATTCGAAGCCAGCAT+TGG 0.518488 5_4:-51181520 None:intergenic
TCTTTATTCGAAGCCAGCAT+TGG 0.518488 5_4:-51181646 None:intergenic
TAAGGTTACACAAACTTCTA+GGG 0.520666 5_4:+51181101 Msa0856460:CDS
AAAAGGTGCATGGACATATG+AGG 0.529512 5_4:+51177494 Msa0856460:CDS
TCGGACAATTTATGGAACTT+GGG 0.537709 5_4:+51181790 Msa0856460:CDS
GGCAGTGAGAAAATTGGCTC+AGG 0.543452 5_4:+51181823 Msa0856460:CDS
TTTATGTCCCAACATCAAAA+GGG 0.545856 5_4:+51181045 Msa0856460:CDS
ATGCTGGCTTCGAATAAAGA+TGG 0.552458 5_4:+51181523 Msa0856460:CDS
ATGCTGGCTTCGAATAAAGA+TGG 0.552458 5_4:+51181649 Msa0856460:CDS
CTCAGGCTCTTCATTACAAG+AGG 0.556126 5_4:+51181840 Msa0856460:CDS
CACAAAGGTTGAAATTCCAA+AGG 0.556303 5_4:-51181900 None:intergenic
ATGCTGGCTTCGAATAAAGA+TGG 0.564828 5_4:+51181586 Msa0856460:CDS
ACAAAGGTTGAAATTCCAAA+GGG 0.573402 5_4:-51181899 None:intergenic
GATCATATCAACTTCATCCT+CGG 0.573441 5_4:-51181077 None:intergenic
CGGACAATTTATGGAACTTG+GGG 0.579999 5_4:+51181791 Msa0856460:CDS
TGAGGAAGACAAGCTACTCA+AGG 0.611389 5_4:+51177512 Msa0856460:CDS
GCCGTAAAAGTTGTAGATTG+AGG 0.612568 5_4:+51181011 Msa0856460:CDS
GAGGTTTGAGAAAAGGTGCA+TGG 0.612742 5_4:+51177484 Msa0856460:CDS
TGTATACAGAAGTATGGTGA+AGG 0.613440 5_4:+51177537 Msa0856460:CDS
GTAAAAGTTGTAGATTGAGG+TGG 0.620224 5_4:+51181014 Msa0856460:CDS
TTGTCCGACCACATTGAACA+CGG 0.642822 5_4:-51181775 None:intergenic
CAGCACATGGAGAAGACTAG+AGG 0.644657 5_4:+51177465 None:intergenic
CAAAAGGGAAAGCTTTGCCG+AGG 0.647787 5_4:+51181060 Msa0856460:CDS
TCCCAATACCGTGTTCAATG+TGG 0.677642 5_4:+51181767 Msa0856460:CDS
AATACCGTGTTCAATGTGGT+CGG 0.678428 5_4:+51181771 Msa0856460:CDS
AAAGAGAATCGAAATCACAA+AGG 0.679393 5_4:-51181915 None:intergenic
GGACAATTTATGGAACTTGG+GGG 0.723733 5_4:+51181792 Msa0856460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATTAATTAAAAATAAA+TGG - chr5_4:51178101-51178120 None:intergenic 0.0%
!! TAAAAAATAGAAAAAGAAAA+AGG + chr5_4:51178535-51178554 Msa0856460:intron 10.0%
!!! CTCTTTTAAATAAATTTTTT+TGG + chr5_4:51178755-51178774 Msa0856460:intron 10.0%
!!! AATAATTACTATTTTAATCA+AGG - chr5_4:51180076-51180095 None:intergenic 10.0%
!!! TATACATTTTTTTTTAAACA+AGG - chr5_4:51180787-51180806 None:intergenic 10.0%
!!! ATTTTTTTCTTGTTGATATA+AGG + chr5_4:51177635-51177654 Msa0856460:intron 15.0%
!!! TTTTTTTCTTGTTGATATAA+GGG + chr5_4:51177636-51177655 Msa0856460:intron 15.0%
!! TGTTCAACTTAATTAATTAT+AGG - chr5_4:51177794-51177813 None:intergenic 15.0%
!! TAAATAATTGTCAAGATATT+TGG - chr5_4:51177890-51177909 None:intergenic 15.0%
!!! ATTCAGTTCAATTTTAAAAA+AGG - chr5_4:51178062-51178081 None:intergenic 15.0%
!! ATTGTTATGAATATATTAAG+TGG + chr5_4:51178123-51178142 Msa0856460:intron 15.0%
!!! TTTGTTCAAATTTAAAGTAT+TGG - chr5_4:51178693-51178712 None:intergenic 15.0%
!! AAAAAATGCTTGTTTAAATA+AGG + chr5_4:51178819-51178838 Msa0856460:intron 15.0%
!! TATATATATATATATCGAGT+TGG + chr5_4:51180123-51180142 Msa0856460:intron 15.0%
!! TTTGTCTAAATATTTATATG+TGG + chr5_4:51180611-51180630 Msa0856460:intron 15.0%
!!! ACATAAACAAATTTGAATTT+TGG - chr5_4:51181145-51181164 None:intergenic 15.0%
!! TGTTCAACTTAGTTAATTAT+AGG - chr5_4:51177705-51177724 None:intergenic 20.0%
!! TAAGAAAAGAAAATTATGCA+TGG - chr5_4:51177754-51177773 None:intergenic 20.0%
!!! AGTTTTTATTTGCACTATTT+TGG - chr5_4:51177949-51177968 None:intergenic 20.0%
!! AAAATAGAAAAAGAAAAAGG+AGG + chr5_4:51178538-51178557 Msa0856460:intron 20.0%
!! TTGTGTCAATATAAATCAAA+TGG + chr5_4:51178564-51178583 Msa0856460:intron 20.0%
!! TATAAATCAAATGGAAATCA+TGG + chr5_4:51178573-51178592 Msa0856460:intron 20.0%
!! TAAAAGAGATTCAATAGAAA+TGG - chr5_4:51178743-51178762 None:intergenic 20.0%
!!! ATGCTATTACAGATTTTATT+TGG + chr5_4:51179436-51179455 Msa0856460:intron 20.0%
!!! TCAACATATGTTTTTGTATT+AGG + chr5_4:51179605-51179624 Msa0856460:intron 20.0%
!!! CAACATATGTTTTTGTATTA+GGG + chr5_4:51179606-51179625 Msa0856460:intron 20.0%
!! AGTAAAAGGTGAAAAAAAAT+GGG - chr5_4:51179848-51179867 None:intergenic 20.0%
!! TAGTAAAAGGTGAAAAAAAA+TGG - chr5_4:51179849-51179868 None:intergenic 20.0%
!!! TTTATTTAAAAGTCTTGTGA+AGG + chr5_4:51180013-51180032 Msa0856460:intron 20.0%
!!! ATTTAGTTTACTTATTCTTC+AGG + chr5_4:51180415-51180434 Msa0856460:intron 20.0%
!! TTTCGATGTTCTTAAATATT+CGG - chr5_4:51180519-51180538 None:intergenic 20.0%
!! TATCTCCAAAATTATCTATT+TGG + chr5_4:51180859-51180878 Msa0856460:intron 20.0%
!! TAGAAATGAAATTATGCAAA+TGG - chr5_4:51180942-51180961 None:intergenic 20.0%
!!! TAATGATGTGAAAAACTTTT+TGG + chr5_4:51181332-51181351 Msa0856460:intron 20.0%
! CAACTTAGTTAATTATAGGA+AGG - chr5_4:51177701-51177720 None:intergenic 25.0%
! CTTAAGAGTTAAGTAGTTAA+GGG - chr5_4:51178232-51178251 None:intergenic 25.0%
! ACTTAAGAGTTAAGTAGTTA+AGG - chr5_4:51178233-51178252 None:intergenic 25.0%
! GTGTACAATTATGTTAAATG+TGG - chr5_4:51178284-51178303 None:intergenic 25.0%
!!! TATTGATTTTTGGTAAACAG+TGG - chr5_4:51178606-51178625 None:intergenic 25.0%
! AGGAACATATGAAAATTTCT+TGG + chr5_4:51178788-51178807 Msa0856460:intron 25.0%
! CATATGAAAATTTCTTGGAT+TGG + chr5_4:51178793-51178812 Msa0856460:intron 25.0%
! TGTATAATTATACTGCAAAG+AGG - chr5_4:51179325-51179344 None:intergenic 25.0%
! AGTATAATTATACAGATCAG+TGG + chr5_4:51179331-51179350 Msa0856460:intron 25.0%
!!! AGATTTTATTTGGCATAAAC+AGG + chr5_4:51179446-51179465 Msa0856460:intron 25.0%
!! TATTATTTCTCACGATAATC+AGG + chr5_4:51179548-51179567 Msa0856460:intron 25.0%
!!! ATATGTTTTTGTATTAGGGT+TGG + chr5_4:51179610-51179629 Msa0856460:intron 25.0%
! GTAAAAGGTGAAAAAAAATG+GGG - chr5_4:51179847-51179866 None:intergenic 25.0%
! GAATACAATGTAAAACATAG+TGG - chr5_4:51179914-51179933 None:intergenic 25.0%
!!! TTTTGAAGATATTAGAAAGG+AGG - chr5_4:51179962-51179981 None:intergenic 25.0%
!!! GAGTTTTGAAGATATTAGAA+AGG - chr5_4:51179965-51179984 None:intergenic 25.0%
! ATAATTGTTATGTAAGAGAG+AGG - chr5_4:51180053-51180072 None:intergenic 25.0%
! AGCAAAGACAATACAAAATA+GGG - chr5_4:51180318-51180337 None:intergenic 25.0%
! AAGCAAAGACAATACAAAAT+AGG - chr5_4:51180319-51180338 None:intergenic 25.0%
! GTCTAAATATTTATATGTGG+TGG + chr5_4:51180614-51180633 Msa0856460:intron 25.0%
!! AGAGTATCATTAATAACACA+AGG - chr5_4:51180739-51180758 None:intergenic 25.0%
!!! GATAATTTTGGAGATACTTT+AGG - chr5_4:51180855-51180874 None:intergenic 25.0%
!! TCATGCCAAATAGATAATTT+TGG - chr5_4:51180867-51180886 None:intergenic 25.0%
!! TGTGAAACTATTTGTTAACT+TGG + chr5_4:51180973-51180992 Msa0856460:intron 25.0%
!!! ATGAAGTTGATATGATCTTA+AGG + chr5_4:51181083-51181102 Msa0856460:CDS 25.0%
!!! AACAAATTTGAATTTTGGCT+CGG - chr5_4:51181140-51181159 None:intergenic 25.0%
! ACATATACATGTGATATAGA+TGG + chr5_4:51181274-51181293 Msa0856460:intron 25.0%
!!! TTTTTTCAACTCATTCATCA+TGG + chr5_4:51181464-51181483 Msa0856460:intron 25.0%
! ACTATGGTTACATTTCAAAA+TGG + chr5_4:51181703-51181722 Msa0856460:CDS 25.0%
AAGTTGAACAACTGTATAGA+AGG + chr5_4:51177715-51177734 Msa0856460:intron 30.0%
! TTTTGACAAAACTTTATGCC+AGG + chr5_4:51177913-51177932 Msa0856460:intron 30.0%
TTTGACAAAACTTTATGCCA+GGG + chr5_4:51177914-51177933 Msa0856460:intron 30.0%
!! TGATCAGTTTTCTGGTATTT+TGG - chr5_4:51177987-51178006 None:intergenic 30.0%
CACTTAAGAGATAAGTACAA+GGG - chr5_4:51178165-51178184 None:intergenic 30.0%
TCACTTAAGAGATAAGTACA+AGG - chr5_4:51178166-51178185 None:intergenic 30.0%
ATGATTATGGTATTCTCTTG+TGG - chr5_4:51178306-51178325 None:intergenic 30.0%
AGAGAGAACAAAGATGATTA+TGG - chr5_4:51178319-51178338 None:intergenic 30.0%
AGAATAAAGAGAAGTAGTGA+AGG - chr5_4:51178342-51178361 None:intergenic 30.0%
!! TAGAAATGGATTATACCTGA+CGG - chr5_4:51178729-51178748 None:intergenic 30.0%
! GAGTTTAACATTGCTTTGTT+AGG + chr5_4:51178874-51178893 Msa0856460:intron 30.0%
CTTTGTTAGGAAAATGATGT+TGG + chr5_4:51178887-51178906 Msa0856460:intron 30.0%
! GAGAATATTGTGAGAAGTAT+TGG + chr5_4:51179075-51179094 Msa0856460:intron 30.0%
!! ATTGTGAGAAGTATTGGTAA+TGG + chr5_4:51179081-51179100 Msa0856460:intron 30.0%
TATTCGCAACTAAGTCAAAA+AGG - chr5_4:51179173-51179192 None:intergenic 30.0%
TGCGAATAAGTCAATTTCAA+TGG + chr5_4:51179185-51179204 Msa0856460:intron 30.0%
GAATAAGTCAATTTCAATGG+CGG + chr5_4:51179188-51179207 Msa0856460:intron 30.0%
! ATTATTTGTTAGAGGAGTGT+AGG + chr5_4:51179283-51179302 Msa0856460:intron 30.0%
! TTATCCTATTGGTAGTTACT+CGG + chr5_4:51179365-51179384 Msa0856460:intron 30.0%
! TCTCTTGAAGGTTTCAATTT+TGG + chr5_4:51179470-51179489 Msa0856460:intron 30.0%
CGACTTTATAACAATTGGTT+CGG + chr5_4:51179672-51179691 Msa0856460:intron 30.0%
!!! CCTTTTTTTTAACTCGAGTT+CGG + chr5_4:51179724-51179743 Msa0856460:intron 30.0%
TAAGTATAGTTCAACTCGTT+TGG - chr5_4:51180157-51180176 None:intergenic 30.0%
! TCAATACTCGATTCGATAAT+TGG - chr5_4:51180263-51180282 None:intergenic 30.0%
!!! GTATTGAACTATTTTCGAGT+TGG + chr5_4:51180276-51180295 Msa0856460:intron 30.0%
TAGTTTACTTATTCTTCAGG+TGG + chr5_4:51180418-51180437 Msa0856460:intron 30.0%
! AAGTGAAACTACATTCCTTT+TGG + chr5_4:51180563-51180582 Msa0856460:intron 30.0%
! TGATTGCATGTATACTTTTG+AGG + chr5_4:51180699-51180718 Msa0856460:intron 30.0%
!!! TATACTTTTGAGGTCCTTAT+TGG + chr5_4:51180709-51180728 Msa0856460:intron 30.0%
TTAGGACTAACTTAAAGACA+TGG - chr5_4:51180837-51180856 None:intergenic 30.0%
TCTATTTGGCATGACTTTAT+TGG + chr5_4:51180873-51180892 Msa0856460:intron 30.0%
! AAACTATTTGTTAACTTGGC+AGG + chr5_4:51180977-51180996 Msa0856460:intron 30.0%
! ACCTCAATCTACAACTTTTA+CGG - chr5_4:51181015-51181034 None:intergenic 30.0%
ATTTATGTCCCAACATCAAA+AGG + chr5_4:51181044-51181063 Msa0856460:CDS 30.0%
TTTATGTCCCAACATCAAAA+GGG + chr5_4:51181045-51181064 Msa0856460:CDS 30.0%
TTAAGGTTACACAAACTTCT+AGG + chr5_4:51181100-51181119 Msa0856460:CDS 30.0%
TAAGGTTACACAAACTTCTA+GGG + chr5_4:51181101-51181120 Msa0856460:CDS 30.0%
! AAGGTTGTTTCAGAAACAAA+AGG + chr5_4:51181373-51181392 Msa0856460:intron 30.0%
GAAAGAAAAAGAGAAACCTA+AGG + chr5_4:51181399-51181418 Msa0856460:intron 30.0%
AGTTGAAAAAATTCGAGGTT+GGG - chr5_4:51181455-51181474 None:intergenic 30.0%
! GAATGAGTTGAAAAAATTCG+AGG - chr5_4:51181460-51181479 None:intergenic 30.0%
! ATAAAGATGGTAATGTTTCC+AGG + chr5_4:51181536-51181555 Msa0856460:CDS 30.0%
CACAAAATTAACATGTTTCC+TGG - chr5_4:51181494-51181513 None:intergenic 30.0%
ACAAGAGGAGAACTTTAATA+TGG + chr5_4:51181855-51181874 Msa0856460:CDS 30.0%
ACAAAGGTTGAAATTCCAAA+GGG - chr5_4:51181902-51181921 None:intergenic 30.0%
AAAGAGAATCGAAATCACAA+AGG - chr5_4:51181918-51181937 None:intergenic 30.0%
TTTGTGATTTCGATTCTCTT+TGG + chr5_4:51181917-51181936 Msa0856460:CDS 30.0%
TTGTGATTTCGATTCTCTTT+GGG + chr5_4:51181918-51181937 Msa0856460:CDS 30.0%
AAGACTAGAGGTTTGAGAAA+AGG + chr5_4:51177477-51177496 Msa0856460:CDS 35.0%
AAGGCTTGTATACAGAAGTA+TGG + chr5_4:51177531-51177550 Msa0856460:CDS 35.0%
! TGTATACAGAAGTATGGTGA+AGG + chr5_4:51177537-51177556 Msa0856460:CDS 35.0%
! AGAAGTATGGTGAAGGAAAA+TGG + chr5_4:51177544-51177563 Msa0856460:CDS 35.0%
! CATTTAGTTTCTCAAAGAGC+AGG + chr5_4:51177567-51177586 Msa0856460:CDS 35.0%
!! AGTTTTCTGGTATTTTGGAG+AGG - chr5_4:51177982-51178001 None:intergenic 35.0%
! AAGTACAAGGGTTTTTGTTG+TGG - chr5_4:51178153-51178172 None:intergenic 35.0%
!!! ATTTTTTTGGAGAGCAAGTG+AGG + chr5_4:51178768-51178787 Msa0856460:intron 35.0%
GCTTGTTTAAATAAGGAGCA+TGG + chr5_4:51178826-51178845 Msa0856460:intron 35.0%
! AAATAAGGAGCATGGATGTT+TGG + chr5_4:51178834-51178853 Msa0856460:intron 35.0%
! AATAAGGAGCATGGATGTTT+GGG + chr5_4:51178835-51178854 Msa0856460:intron 35.0%
TGTTAGGAAAATGATGTTGG+AGG + chr5_4:51178890-51178909 Msa0856460:intron 35.0%
TGGAGGATGTTAATTGATAG+AGG + chr5_4:51178907-51178926 Msa0856460:intron 35.0%
AGGATGTTAATTGATAGAGG+AGG + chr5_4:51178910-51178929 Msa0856460:intron 35.0%
TAATTGATAGAGGAGGTTTG+TGG + chr5_4:51178917-51178936 Msa0856460:intron 35.0%
GAGGTTGTTAAAATTCGTGA+TGG + chr5_4:51179021-51179040 Msa0856460:intron 35.0%
GTTGTTAAAATTCGTGATGG+TGG + chr5_4:51179024-51179043 Msa0856460:intron 35.0%
ATGGTGTGAATACTTTCTTC+TGG + chr5_4:51179100-51179119 Msa0856460:intron 35.0%
TGTGAATACTTTCTTCTGGA+CGG + chr5_4:51179104-51179123 Msa0856460:intron 35.0%
! GGAAATGTGTGATTTAGGTT+TGG + chr5_4:51179209-51179228 Msa0856460:intron 35.0%
! AATGTGTGATTTAGGTTTGG+AGG + chr5_4:51179212-51179231 Msa0856460:intron 35.0%
! ATGGGAGGATTATTTGTTAG+AGG + chr5_4:51179275-51179294 Msa0856460:intron 35.0%
ATTATACAGATCAGTGGTAG+TGG + chr5_4:51179337-51179356 Msa0856460:intron 35.0%
CGACTCGACTTTATAACAAT+TGG + chr5_4:51179667-51179686 Msa0856460:intron 35.0%
CCGAACTCGAGTTAAAAAAA+AGG - chr5_4:51179727-51179746 None:intergenic 35.0%
AAGGTGAAAAAAAATGGGGT+TGG - chr5_4:51179843-51179862 None:intergenic 35.0%
GTGTATGCTACAGTAGTAAA+AGG - chr5_4:51179862-51179881 None:intergenic 35.0%
CATAAAATTGTCCCACATCA+GGG - chr5_4:51179987-51180006 None:intergenic 35.0%
CAACTCAAGTTCAACTCATT+TGG + chr5_4:51180215-51180234 Msa0856460:intron 35.0%
!! GATAATTGGTTCGTTGAACT+TGG - chr5_4:51180249-51180268 None:intergenic 35.0%
!!! GAACTATTTTCGAGTTGGTT+AGG + chr5_4:51180281-51180300 Msa0856460:intron 35.0%
TTATCTAGCAACCTATGGAA+AGG - chr5_4:51180544-51180563 None:intergenic 35.0%
TCACTTTATCTAGCAACCTA+TGG - chr5_4:51180549-51180568 None:intergenic 35.0%
! TGAAACTACATTCCTTTTGG+TGG + chr5_4:51180566-51180585 Msa0856460:intron 35.0%
AATAGTCTTCATCCACCAAA+AGG - chr5_4:51180581-51180600 None:intergenic 35.0%
! TTAACTTGGCAGGATTGAAT+AGG + chr5_4:51180987-51181006 Msa0856460:intron 35.0%
GTAAAAGTTGTAGATTGAGG+TGG + chr5_4:51181014-51181033 Msa0856460:CDS 35.0%
! AAGCTTTCCCTTTTGATGTT+GGG - chr5_4:51181055-51181074 None:intergenic 35.0%
! AAAGCTTTCCCTTTTGATGT+TGG - chr5_4:51181056-51181075 None:intergenic 35.0%
GATCATATCAACTTCATCCT+CGG - chr5_4:51181080-51181099 None:intergenic 35.0%
! TACACAAACTTCTAGGGAAT+AGG + chr5_4:51181107-51181126 Msa0856460:CDS 35.0%
TGAGGTTTCATTGTTTCCTT+AGG - chr5_4:51181418-51181437 None:intergenic 35.0%
TGGGGTTTAATAACTTCATG+AGG - chr5_4:51181436-51181455 None:intergenic 35.0%
GTTGAAAAAATTCGAGGTTG+GGG - chr5_4:51181454-51181473 None:intergenic 35.0%
GAGTTGAAAAAATTCGAGGT+TGG - chr5_4:51181456-51181475 None:intergenic 35.0%
CTCATTCATCATGGTTGAAT+AGG + chr5_4:51181473-51181492 Msa0856460:intron 35.0%
CGCAAAATTAACATGTTTCG+TGG - chr5_4:51181620-51181639 None:intergenic 35.0%
TCGGACAATTTATGGAACTT+GGG + chr5_4:51181790-51181809 Msa0856460:CDS 35.0%
CAATTAGGCAGTGAGAAAAT+TGG + chr5_4:51181817-51181836 Msa0856460:CDS 35.0%
CACAAAGGTTGAAATTCCAA+AGG - chr5_4:51181903-51181922 None:intergenic 35.0%
! AAAAGGTGCATGGACATATG+AGG + chr5_4:51177494-51177513 Msa0856460:CDS 40.0%
!! TATTTTGGATATGCGTACCC+TGG - chr5_4:51177934-51177953 None:intergenic 40.0%
AGAAAACTGATCACACCACT+CGG + chr5_4:51177994-51178013 Msa0856460:intron 40.0%
AACATATTCAAAGCTCCGTC+AGG + chr5_4:51178711-51178730 Msa0856460:intron 40.0%
! ATAAGGAGCATGGATGTTTG+GGG + chr5_4:51178836-51178855 Msa0856460:intron 40.0%
TTTGGGGGTTAGGAAAATGA+GGG + chr5_4:51178852-51178871 Msa0856460:intron 40.0%
ATAGAGGAGGTTTGTGGTTT+AGG + chr5_4:51178923-51178942 Msa0856460:intron 40.0%
TAGAGGAGGTTTGTGGTTTA+GGG + chr5_4:51178924-51178943 Msa0856460:intron 40.0%
!! GTTAAAATTCGTGATGGTGG+AGG + chr5_4:51179027-51179046 Msa0856460:intron 40.0%
TCGCAACTAAGTCAAAAAGG+TGG - chr5_4:51179170-51179189 None:intergenic 40.0%
! ATGGCGGAAATGTGTGATTT+AGG + chr5_4:51179204-51179223 Msa0856460:intron 40.0%
! TGTGATTTAGGTTTGGAGGA+AGG + chr5_4:51179216-51179235 Msa0856460:intron 40.0%
!! TAGTGGTGGCTTTATCCTAT+TGG + chr5_4:51179354-51179373 Msa0856460:intron 40.0%
! TATTGGTAGTTACTCGGTCA+GGG + chr5_4:51179371-51179390 Msa0856460:intron 40.0%
TGTAATAGCATCAGAGCTTG+GGG - chr5_4:51179427-51179446 None:intergenic 40.0%
CTGTAATAGCATCAGAGCTT+GGG - chr5_4:51179428-51179447 None:intergenic 40.0%
TCTGTAATAGCATCAGAGCT+TGG - chr5_4:51179429-51179448 None:intergenic 40.0%
GCATAAACAGGTTCTCTTGA+AGG + chr5_4:51179458-51179477 Msa0856460:intron 40.0%
!! TGAAGGTTTCAATTTTGGCC+TGG + chr5_4:51179475-51179494 Msa0856460:intron 40.0%
GCTATCAGATTATCCTTCGT+CGG - chr5_4:51179522-51179541 None:intergenic 40.0%
GATAATCAGGTATGTGTACC+TGG + chr5_4:51179561-51179580 Msa0856460:intron 40.0%
AGTTCACGAACAACTCAGTT+CGG + chr5_4:51179756-51179775 Msa0856460:intron 40.0%
ATCTTCAAAACTCCCTGATG+TGG + chr5_4:51179972-51179991 Msa0856460:intron 40.0%
TCTTCAAAACTCCCTGATGT+GGG + chr5_4:51179973-51179992 Msa0856460:intron 40.0%
GCATAAAATTGTCCCACATC+AGG - chr5_4:51179988-51180007 None:intergenic 40.0%
! GTTCCTTATTGCAGCTTGTT+TGG + chr5_4:51180455-51180474 Msa0856460:intron 40.0%
AAGCCAAACAAGCTGCAATA+AGG - chr5_4:51180461-51180480 None:intergenic 40.0%
!! TTGTTTGGCTTTGTTGCGTT+TGG + chr5_4:51180470-51180489 Msa0856460:intron 40.0%
!! TGTTTGGCTTTGTTGCGTTT+GGG + chr5_4:51180471-51180490 Msa0856460:intron 40.0%
!! TTTGTTGCGTTTGGGTTTTG+TGG + chr5_4:51180479-51180498 Msa0856460:intron 40.0%
ACATCGAAAGTCCTTTCCAT+AGG + chr5_4:51180530-51180549 Msa0856460:intron 40.0%
TAGATGCCCAGACAAACAAA+CGG - chr5_4:51180646-51180665 None:intergenic 40.0%
!! TAACACAAGGAGTGCCAATA+AGG - chr5_4:51180726-51180745 None:intergenic 40.0%
GCCGTAAAAGTTGTAGATTG+AGG + chr5_4:51181011-51181030 Msa0856460:CDS 40.0%
ACATCATTAGCAGTTCTACC+AGG - chr5_4:51181321-51181340 None:intergenic 40.0%
!! CTTTTTGGCACACACATTTG+CGG + chr5_4:51181347-51181366 Msa0856460:intron 40.0%
! TTTTGTGTCACAACCAATGC+TGG + chr5_4:51181507-51181526 Msa0856460:CDS 40.0%
TCTTTATTCGAAGCCAGCAT+TGG - chr5_4:51181523-51181542 None:intergenic 40.0%
!! ATGCTGGCTTCGAATAAAGA+TGG + chr5_4:51181523-51181542 Msa0856460:CDS 40.0%
TCTTTATTCGAAGCCAGCAT+TGG - chr5_4:51181523-51181542 None:intergenic 40.0%
!! ATGCTGGCTTCGAATAAAGA+TGG + chr5_4:51181523-51181542 Msa0856460:CDS 40.0%
TCTTTATTCGAAGCCAGCAT+TGG - chr5_4:51181523-51181542 None:intergenic 40.0%
!! ATGCTGGCTTCGAATAAAGA+TGG + chr5_4:51181523-51181542 Msa0856460:CDS 40.0%
ACCACATTGAACACGGTATT+GGG - chr5_4:51181771-51181790 None:intergenic 40.0%
AATACCGTGTTCAATGTGGT+CGG + chr5_4:51181771-51181790 Msa0856460:CDS 40.0%
CAATGTGGTCGGACAATTTA+TGG + chr5_4:51181782-51181801 Msa0856460:CDS 40.0%
GTCGGACAATTTATGGAACT+TGG + chr5_4:51181789-51181808 Msa0856460:CDS 40.0%
CGGACAATTTATGGAACTTG+GGG + chr5_4:51181791-51181810 Msa0856460:CDS 40.0%
GGACAATTTATGGAACTTGG+GGG + chr5_4:51181792-51181811 Msa0856460:CDS 40.0%
!! TAGATGTTGATGACTCCCTT+TGG + chr5_4:51181884-51181903 Msa0856460:CDS 40.0%
! GAGGTTTGAGAAAAGGTGCA+TGG + chr5_4:51177484-51177503 Msa0856460:CDS 45.0%
TGAGGAAGACAAGCTACTCA+AGG + chr5_4:51177512-51177531 Msa0856460:CDS 45.0%
! GAGTGGTGTGATCAGTTTTC+TGG - chr5_4:51177995-51178014 None:intergenic 45.0%
GAAAACTGATCACACCACTC+GGG + chr5_4:51177995-51178014 Msa0856460:intron 45.0%
! TAAGGAGCATGGATGTTTGG+GGG + chr5_4:51178837-51178856 Msa0856460:intron 45.0%
GTTTGGGGGTTAGGAAAATG+AGG + chr5_4:51178851-51178870 Msa0856460:intron 45.0%
! AGGTTTGTGGTTTAGGGCAT+TGG + chr5_4:51178930-51178949 Msa0856460:intron 45.0%
!! TTTGTGGTTTAGGGCATTGG+TGG + chr5_4:51178933-51178952 Msa0856460:intron 45.0%
AGGGTTGAAGGTTAGAGGAT+GGG + chr5_4:51178971-51178990 Msa0856460:intron 45.0%
!! ATACAGATCAGTGGTAGTGG+TGG + chr5_4:51179340-51179359 Msa0856460:intron 45.0%
CTGACCGAGTAACTACCAAT+AGG - chr5_4:51179372-51179391 None:intergenic 45.0%
! CTATTGGTAGTTACTCGGTC+AGG + chr5_4:51179370-51179389 Msa0856460:intron 45.0%
! ATTGGTAGTTACTCGGTCAG+GGG + chr5_4:51179372-51179391 Msa0856460:intron 45.0%
GTACAAGATGCTCACTAACC+AGG + chr5_4:51179398-51179417 Msa0856460:intron 45.0%
! ACAACTCAGTTCGGCTTGTT+AGG + chr5_4:51179765-51179784 Msa0856460:intron 45.0%
GTCTTTGCTTCACTTCTCTG+TGG + chr5_4:51180329-51180348 Msa0856460:intron 45.0%
!! GTCTTGGCTTGGCATTTCTA+CGG + chr5_4:51180363-51180382 Msa0856460:intron 45.0%
TCGAGTCCGTTTGTTTGTCT+GGG + chr5_4:51180637-51180656 Msa0856460:intron 45.0%
TTGATTGCTGCAAGACTTCC+TGG + chr5_4:51181300-51181319 Msa0856460:intron 45.0%
! TTTTGTGTCACAGCCAATGC+TGG + chr5_4:51181570-51181589 Msa0856460:CDS 45.0%
! TTTTGCGTCACAACCAATGC+TGG + chr5_4:51181633-51181652 Msa0856460:CDS 45.0%
GTCTCGATCATCGTGATCTT+TGG - chr5_4:51181683-51181702 None:intergenic 45.0%
TCACGATGATCGAGACACTA+TGG + chr5_4:51181687-51181706 Msa0856460:CDS 45.0%
TCCCAATACCGTGTTCAATG+TGG + chr5_4:51181767-51181786 Msa0856460:CDS 45.0%
GACCACATTGAACACGGTAT+TGG - chr5_4:51181772-51181791 None:intergenic 45.0%
TTGTCCGACCACATTGAACA+CGG - chr5_4:51181778-51181797 None:intergenic 45.0%
TGGAACTTGGGGGAACAATT+AGG + chr5_4:51181802-51181821 Msa0856460:CDS 45.0%
CTCAGGCTCTTCATTACAAG+AGG + chr5_4:51181840-51181859 Msa0856460:CDS 45.0%
!!! TTCTATTTTTTAAAATTTAA+TGG - chr5_4:51178527-51178546 None:intergenic 5.0%
!!! TTTTTTATTTTATTGATTTT+TGG - chr5_4:51178616-51178635 None:intergenic 5.0%
!! AAAAATCAATAAAATAAAAA+AGG + chr5_4:51178615-51178634 Msa0856460:intron 5.0%
ATCACACCACTCGGGTTTAG+AGG + chr5_4:51178003-51178022 Msa0856460:intron 50.0%
TGAACACCTCTAAACCCGAG+TGG - chr5_4:51178012-51178031 None:intergenic 50.0%
AGCATGGATGTTTGGGGGTT+AGG + chr5_4:51178842-51178861 Msa0856460:intron 50.0%
! ATTGGTGGCTCGTTATGGTG+AGG + chr5_4:51178948-51178967 Msa0856460:intron 50.0%
GTTATGGTGAGGAGGGTTGA+AGG + chr5_4:51178959-51178978 Msa0856460:intron 50.0%
TGAGGAGGGTTGAAGGTTAG+AGG + chr5_4:51178966-51178985 Msa0856460:intron 50.0%
GAGGGTTGAAGGTTAGAGGA+TGG + chr5_4:51178970-51178989 Msa0856460:intron 50.0%
GGGTTGAAGGTTAGAGGATG+GGG + chr5_4:51178972-51178991 Msa0856460:intron 50.0%
GGTTGAAGGTTAGAGGATGG+GGG + chr5_4:51178973-51178992 Msa0856460:intron 50.0%
!! GGTGGAGGTGTTGATGAAAG+CGG + chr5_4:51179042-51179061 Msa0856460:intron 50.0%
!! GTGGAGGTGTTGATGAAAGC+GGG + chr5_4:51179043-51179062 Msa0856460:intron 50.0%
CTTTCTTCTGGACGGATCTG+TGG + chr5_4:51179112-51179131 Msa0856460:intron 50.0%
TTCTGGACGGATCTGTGGTT+GGG + chr5_4:51179117-51179136 Msa0856460:intron 50.0%
TGGCTATACTGCACACGCAA+GGG - chr5_4:51179150-51179169 None:intergenic 50.0%
! TTTAGGTTTGGAGGAAGGCG+AGG + chr5_4:51179221-51179240 Msa0856460:intron 50.0%
CAAGATGCTCACTAACCAGG+AGG + chr5_4:51179401-51179420 Msa0856460:intron 50.0%
! TTTTGGCCTGGAGACTCCTT+CGG + chr5_4:51179487-51179506 Msa0856460:intron 50.0%
CAGGTATGTGTACCTGGATG+TGG + chr5_4:51179567-51179586 Msa0856460:intron 50.0%
GTATGTGTACCTGGATGTGG+AGG + chr5_4:51179570-51179589 Msa0856460:intron 50.0%
GTCTCTAATCCTCCACATCC+AGG - chr5_4:51179582-51179601 None:intergenic 50.0%
CATGCTCCTGAAGATGAGAC+GGG - chr5_4:51180393-51180412 None:intergenic 50.0%
GCATGCTCCTGAAGATGAGA+CGG - chr5_4:51180394-51180413 None:intergenic 50.0%
GTCGAGTCCGTTTGTTTGTC+TGG + chr5_4:51180636-51180655 Msa0856460:intron 50.0%
CAAAAGGGAAAGCTTTGCCG+AGG + chr5_4:51181060-51181079 Msa0856460:CDS 50.0%
GCACACACATTTGCGGAAGA+AGG + chr5_4:51181354-51181373 Msa0856460:intron 50.0%
! GGCAGTGAGAAAATTGGCTC+AGG + chr5_4:51181823-51181842 Msa0856460:CDS 50.0%
!! AGGGCATTGGTGGCTCGTTA+TGG + chr5_4:51178943-51178962 Msa0856460:intron 55.0%
GTGGCTCGTTATGGTGAGGA+GGG + chr5_4:51178952-51178971 Msa0856460:intron 55.0%
TCCACCACGAAGAACCACTC+CGG - chr5_4:51178999-51179018 None:intergenic 55.0%
! GAGTGGTTCTTCGTGGTGGA+GGG + chr5_4:51178999-51179018 Msa0856460:intron 55.0%
!! GAGGTGTTGATGAAAGCGGG+TGG + chr5_4:51179046-51179065 Msa0856460:intron 55.0%
CTTCTGGACGGATCTGTGGT+TGG + chr5_4:51179116-51179135 Msa0856460:intron 55.0%
GTGGCTATACTGCACACGCA+AGG - chr5_4:51179151-51179170 None:intergenic 55.0%
! GCGTCGTCGACTATGGTCAT+GGG + chr5_4:51179257-51179276 Msa0856460:intron 55.0%
! TCGTCGACTATGGTCATGGG+AGG + chr5_4:51179260-51179279 Msa0856460:intron 55.0%
AAGTCGAGTCGAGCTCAGAC+AGG - chr5_4:51179658-51179677 None:intergenic 55.0%
!! CTTCTCTGTGGTGCCATGCA+CGG + chr5_4:51180341-51180360 Msa0856460:intron 55.0%
CTCCTGAAGATGAGACGGGT+CGG - chr5_4:51180389-51180408 None:intergenic 55.0%
GGTGGCTCGTTATGGTGAGG+AGG + chr5_4:51178951-51178970 Msa0856460:intron 60.0%
GAAGGTTAGAGGATGGGGGC+CGG + chr5_4:51178977-51178996 Msa0856460:intron 60.0%
GGAGTGGTTCTTCGTGGTGG+AGG + chr5_4:51178998-51179017 Msa0856460:intron 60.0%
! TGGTTCTTCGTGGTGGAGGG+AGG + chr5_4:51179002-51179021 Msa0856460:intron 60.0%
! GGCGTCGTCGACTATGGTCA+TGG + chr5_4:51179256-51179275 Msa0856460:intron 60.0%
CCTGTTCCGAAGGAGTCTCC+AGG - chr5_4:51179496-51179515 None:intergenic 60.0%
CCTGGAGACTCCTTCGGAAC+AGG + chr5_4:51179493-51179512 Msa0856460:intron 60.0%
TCGTCGGCAACCTGTTCCGA+AGG - chr5_4:51179506-51179525 None:intergenic 60.0%
TCGGAACAGGTTGCCGACGA+AGG + chr5_4:51179506-51179525 Msa0856460:intron 60.0%
!! TGTGGTGCCATGCACGGTCT+TGG + chr5_4:51180347-51180366 Msa0856460:intron 60.0%
TGCCATGCACGGTCTTGGCT+TGG + chr5_4:51180352-51180371 Msa0856460:intron 60.0%
TGCCAAGCCAAGACCGTGCA+TGG - chr5_4:51180357-51180376 None:intergenic 60.0%
TTAGAGGATGGGGGCCGGAG+TGG + chr5_4:51178982-51179001 Msa0856460:intron 65.0%
GCCGGAGTGGTTCTTCGTGG+TGG + chr5_4:51178995-51179014 Msa0856460:intron 65.0%
TGGAGGAAGGCGAGGCGACT+TGG + chr5_4:51179229-51179248 Msa0856460:intron 65.0%
! AAGGCGAGGCGACTTGGCAG+TGG + chr5_4:51179235-51179254 Msa0856460:intron 65.0%
! GGCAGTGGCGTCGTCGACTA+TGG + chr5_4:51179250-51179269 Msa0856460:intron 65.0%
CATCAGAGCTTGGGGCCTCC+TGG - chr5_4:51179419-51179438 None:intergenic 65.0%
GGCCGACCCGTCTCATCTTC+AGG + chr5_4:51180384-51180403 Msa0856460:intron 65.0%
GGGGCCGGAGTGGTTCTTCG+TGG + chr5_4:51178992-51179011 Msa0856460:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 51177471 51181951 51177471 ID=Msa0856460;Name=Msa0856460
chr5_4 mRNA 51177471 51181951 51177471 ID=Msa0856460-mRNA-1;Parent=Msa0856460;Name=Msa0856460-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0|0|1|1|1|3|0|234
chr5_4 exon 51177471 51177588 51177471 ID=Msa0856460-mRNA-1:exon:15978;Parent=Msa0856460-mRNA-1
chr5_4 exon 51180999 51181128 51180999 ID=Msa0856460-mRNA-1:exon:15979;Parent=Msa0856460-mRNA-1
chr5_4 exon 51181495 51181951 51181495 ID=Msa0856460-mRNA-1:exon:15980;Parent=Msa0856460-mRNA-1
chr5_4 CDS 51177471 51177588 51177471 ID=Msa0856460-mRNA-1:cds;Parent=Msa0856460-mRNA-1
chr5_4 CDS 51180999 51181128 51180999 ID=Msa0856460-mRNA-1:cds;Parent=Msa0856460-mRNA-1
chr5_4 CDS 51181495 51181951 51181495 ID=Msa0856460-mRNA-1:cds;Parent=Msa0856460-mRNA-1
Gene Sequence

>Msa0856460

ATGGAGAAGACTAGAGGTTTGAGAAAAGGTGCATGGACATATGAGGAAGACAAGCTACTCAAGGCTTGTATACAGAAGTATGGTGAAGGAAAATGGCATTTAGTTTCTCAAAGAGCAGGATTGAATAGGTGCCGTAAAAGTTGTAGATTGAGGTGGTTAAATTATTTATGTCCCAACATCAAAAGGGAAAGCTTTGCCGAGGATGAAGTTGATATGATCTTAAGGTTACACAAACTTCTAGGGAATAGGAAACATGTTAATTTTGTGTCACAACCAATGCTGGCTTCGAATAAAGATGGTAATGTTTCCAGGAAACATGTTAATTTTGTGTCACAGCCAATGCTGGCTTCGAATAAAGATGGTAATGTTTCCACGAAACATGTTAATTTTGCGTCACAACCAATGCTGGCTTCGAATAAAGATGGTAATGTTTCCAAAGATCACGATGATCGAGACACTATGGTTACATTTCAAAATGGTAGAGACTGTGCTTCTGCTTCACAACTAAGTATAGATAATGTCCCAATACCGTGTTCAATGTGGTCGGACAATTTATGGAACTTGGGGGAACAATTAGGCAGTGAGAAAATTGGCTCAGGCTCTTCATTACAAGAGGAGAACTTTAATATGGAGTTTTTAGATGTTGATGACTCCCTTTGGAATTTCAACCTTTGTGATTTCGATTCTCTTTGGGATCTTTATTAG
Protein sequence

>Msa0856460

MEKTRGLRKGAWTYEEDKLLKACIQKYGEGKWHLVSQRAGLNRCRKSCRLRWLNYLCPNIKRESFAEDEVDMILRLHKLLGNRKHVNFVSQPMLASNKDGNVSRKHVNFVSQPMLASNKDGNVSTKHVNFASQPMLASNKDGNVSKDHDDRDTMVTFQNGRDCASASQLSIDNVPIPCSMWSDNLWNLGEQLGSEKIGSGSSLQEENFNMEFLDVDDSLWNFNLCDFDSLWDLY*