AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0856490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0856490 MtrunA17_Chr7g0220341 66.794 262 72 5 1 252 19 275 4.03e-119 341
Msa0856490 MtrunA17_Chr5g0434931 62.500 256 87 3 1 249 29 282 1.17e-104 305
Msa0856490 MtrunA17_Chr8g0360111 65.613 253 76 4 1 252 19 261 1.37e-103 301
Msa0856490 MtrunA17_Chr7g0228991 60.078 258 90 4 1 251 23 274 2.62e-99 291
Msa0856490 MtrunA17_Chr7g0229101 68.837 215 57 4 39 252 4 209 7.44e-89 262
Msa0856490 MtrunA17_Chr5g0434911 56.538 260 96 5 4 251 18 272 4.47e-84 252
Msa0856490 MtrunA17_Chr5g0434841 50.495 303 95 7 1 249 14 315 1.46e-81 247
Msa0856490 MtrunA17_Chr5g0434831 62.814 199 64 4 1 197 1 191 9.85e-73 220
Msa0856490 MtrunA17_Chr7g0229131 58.491 159 56 3 39 196 4 153 7.68e-56 176
Msa0856490 MtrunA17_Chr7g0240821 47.977 173 79 2 11 176 5 173 4.12e-52 169
Msa0856490 MtrunA17_Chr5g0434891 54.658 161 44 3 72 225 1 139 7.98e-48 155
Msa0856490 MtrunA17_Chr3g0121241 61.607 112 43 0 6 117 41 152 1.41e-47 159
Msa0856490 MtrunA17_Chr4g0070611 54.815 135 61 0 6 140 11 145 2.84e-47 159
Msa0856490 MtrunA17_Chr4g0070641 54.815 135 61 0 6 140 11 145 3.61e-47 154
Msa0856490 MtrunA17_Chr8g0346561 65.094 106 37 0 6 111 11 116 9.56e-47 157
Msa0856490 MtrunA17_Chr7g0275911 64.151 106 38 0 6 111 11 116 1.54e-46 155
Msa0856490 MtrunA17_Chr7g0274581 59.434 106 43 0 6 111 11 116 2.24e-44 148
Msa0856490 MtrunA17_Chr1g0187761 53.226 124 58 0 6 129 11 134 1.02e-43 148
Msa0856490 MtrunA17_Chr1g0167691 38.326 227 124 5 5 216 10 235 1.32e-43 148
Msa0856490 MtrunA17_Chr7g0217221 60.377 106 42 0 6 111 11 116 1.49e-43 148
Msa0856490 MtrunA17_Chr4g0037141 46.939 147 72 1 9 149 14 160 4.38e-43 147
Msa0856490 MtrunA17_Chr4g0048511 55.172 116 52 0 2 117 8 123 1.17e-42 148
Msa0856490 MtrunA17_Chr2g0281071 55.172 116 52 0 2 117 8 123 2.32e-42 147
Msa0856490 MtrunA17_Chr4g0039971 57.143 112 48 0 6 117 12 123 2.48e-42 147
Msa0856490 MtrunA17_Chr5g0435101 53.782 119 55 0 7 125 11 129 3.04e-42 143
Msa0856490 MtrunA17_Chr4g0055981 48.701 154 75 2 7 157 55 207 3.39e-42 144
Msa0856490 MtrunA17_Chr3g0131121 50.000 136 68 0 9 144 14 149 5.56e-42 145
Msa0856490 MtrunA17_Chr4g0044421 43.820 178 89 3 9 184 14 182 7.43e-42 141
Msa0856490 MtrunA17_Chr2g0323411 56.250 112 49 0 6 117 11 122 1.25e-41 145
Msa0856490 MtrunA17_Chr5g0410961 57.143 112 48 0 6 117 11 122 1.89e-41 145
Msa0856490 MtrunA17_Chr5g0395281 53.571 112 52 0 6 117 11 122 2.20e-41 144
Msa0856490 MtrunA17_Chr1g0167661 54.545 110 50 0 5 114 10 119 2.31e-41 142
Msa0856490 MtrunA17_Chr7g0261281 53.600 125 57 1 6 129 11 135 2.51e-41 142
Msa0856490 MtrunA17_Chr1g0203411 56.140 114 50 0 6 119 11 124 2.77e-41 143
Msa0856490 MtrunA17_Chr3g0115821 53.571 112 52 0 6 117 11 122 3.46e-41 144
Msa0856490 MtrunA17_Chr4g0022931 54.545 121 55 0 6 126 12 132 3.49e-41 142
Msa0856490 MtrunA17_Chr4g0042671 59.434 106 43 0 6 111 11 116 4.02e-41 145
Msa0856490 MtrunA17_Chr3g0092401 55.556 117 52 0 6 122 12 128 4.13e-41 143
Msa0856490 MtrunA17_Chr5g0434901 67.273 110 35 1 41 150 7 115 5.81e-41 137
Msa0856490 MtrunA17_Chr8g0343831 61.165 103 40 0 9 111 10 112 7.12e-41 140
Msa0856490 MtrunA17_Chr4g0060721 58.491 106 44 0 6 111 12 117 7.76e-41 143
Msa0856490 MtrunA17_Chr7g0254411 58.491 106 44 0 6 111 11 116 1.42e-40 142
Msa0856490 MtrunA17_Chr4g0068061 57.547 106 45 0 6 111 11 116 1.65e-40 142
Msa0856490 MtrunA17_Chr7g0217741 51.220 123 60 0 6 128 11 133 1.73e-40 141
Msa0856490 MtrunA17_Chr4g0022911 49.630 135 67 1 6 140 12 145 1.80e-40 140
Msa0856490 MtrunA17_Chr4g0022901 52.893 121 56 1 6 126 12 131 1.29e-39 138
Msa0856490 MtrunA17_Chr6g0453471 57.547 106 45 0 6 111 11 116 2.24e-39 139
Msa0856490 MtrunA17_Chr6g0453211 59.406 101 41 0 6 106 11 111 6.91e-39 137
Msa0856490 MtrunA17_Chr5g0400821 51.695 118 56 1 7 123 12 129 3.54e-38 135
Msa0856490 MtrunA17_Chr8g0349261 50.000 122 60 1 2 122 8 129 3.78e-38 135
Msa0856490 MtrunA17_Chr3g0103281 53.153 111 52 0 7 117 12 122 7.20e-38 135
Msa0856490 MtrunA17_Chr1g0194951 53.636 110 51 0 6 115 11 120 7.39e-38 136
Msa0856490 MtrunA17_Chr6g0452271 38.554 166 87 1 7 172 12 162 7.44e-38 135
Msa0856490 MtrunA17_Chr1g0211161 39.412 170 83 2 7 156 13 182 2.08e-37 131
Msa0856490 MtrunA17_Chr4g0057031 51.786 112 54 0 6 117 11 122 2.39e-37 132
Msa0856490 MtrunA17_Chr2g0323351 50.394 127 58 1 6 132 11 132 2.61e-37 131
Msa0856490 MtrunA17_Chr1g0151941 52.294 109 51 1 7 114 12 120 2.83e-37 131
Msa0856490 MtrunA17_Chr3g0135311 48.800 125 56 2 7 130 12 129 2.97e-37 134
Msa0856490 MtrunA17_Chr1g0152011 46.154 130 68 2 7 135 12 140 4.69e-37 133
Msa0856490 MtrunA17_Chr7g0270891 55.238 105 47 0 7 111 12 116 8.66e-37 133
Msa0856490 MtrunA17_Chr4g0058631 51.351 111 54 0 7 117 12 122 9.94e-37 132
Msa0856490 MtrunA17_Chr1g0209661 51.304 115 56 0 7 121 27 141 1.09e-36 131
Msa0856490 MtrunA17_Chr8g0385321 51.376 109 53 0 9 117 14 122 1.64e-36 131
Msa0856490 MtrunA17_Chr7g0264641 54.630 108 48 1 7 113 12 119 1.96e-36 130
Msa0856490 MtrunA17_Chr1g0193371 51.327 113 55 0 7 119 12 124 3.43e-36 131
Msa0856490 MtrunA17_Chr1g0193801 54.286 105 48 0 7 111 12 116 3.56e-36 132
Msa0856490 MtrunA17_Chr8g0342541 50.000 114 57 0 3 116 8 121 4.33e-36 130
Msa0856490 MtrunA17_Chr3g0080861 50.926 108 53 0 7 114 37 144 5.42e-36 133
Msa0856490 MtrunA17_Chr8g0342521 49.123 114 58 0 3 116 8 121 6.94e-36 130
Msa0856490 MtrunA17_Chr3g0117091 51.351 111 54 0 7 117 12 122 8.82e-36 130
Msa0856490 MtrunA17_Chr2g0328771 42.763 152 82 3 7 153 20 171 1.17e-35 129
Msa0856490 MtrunA17_Chr5g0417821 47.863 117 61 0 1 117 1 117 1.23e-35 128
Msa0856490 MtrunA17_Chr1g0168661 56.731 104 45 0 8 111 22 125 1.25e-35 127
Msa0856490 MtrunA17_Chr2g0330041 52.252 111 53 0 3 113 8 118 1.58e-35 130
Msa0856490 MtrunA17_Chr7g0228891 51.786 112 54 0 6 117 11 122 1.87e-35 127
Msa0856490 MtrunA17_Chr3g0110351 54.717 106 48 0 6 111 11 116 2.55e-35 128
Msa0856490 MtrunA17_Chr4g0028311 49.153 118 59 1 7 123 12 129 3.52e-35 128
Msa0856490 MtrunA17_Chr5g0434571 54.717 106 48 0 6 111 47 152 4.75e-35 128
Msa0856490 MtrunA17_Chr1g0186061 55.340 103 46 0 8 110 21 123 5.09e-35 125
Msa0856490 MtrunA17_Chr4g0022891 47.934 121 59 1 6 126 11 127 6.89e-35 125
Msa0856490 MtrunA17_Chr7g0228231 49.153 118 60 0 7 124 14 131 1.13e-34 123
Msa0856490 MtrunA17_Chr3g0099131 50.962 104 51 0 7 110 41 144 1.22e-34 130
Msa0856490 MtrunA17_Chr1g0194291 42.500 160 87 1 2 156 16 175 1.32e-34 125
Msa0856490 MtrunA17_Chr8g0354661 51.923 104 50 0 7 110 37 140 1.93e-34 129
Msa0856490 MtrunA17_Chr7g0269831 54.630 108 49 0 6 113 11 118 2.26e-34 126
Msa0856490 MtrunA17_Chr4g0054391 55.556 99 43 1 7 104 12 110 2.72e-34 125
Msa0856490 MtrunA17_Chr8g0387421 49.541 109 55 0 3 111 8 116 3.02e-34 125
Msa0856490 MtrunA17_Chr2g0309911 48.649 111 57 0 7 117 11 121 3.26e-34 125
Msa0856490 MtrunA17_Chr4g0032401 50.909 110 54 0 7 116 17 126 4.35e-34 125
Msa0856490 MtrunA17_Chr4g0022881 51.923 104 50 0 6 109 11 114 4.50e-34 122
Msa0856490 MtrunA17_Chr2g0327821 42.553 141 74 1 7 147 6 139 4.99e-34 122
Msa0856490 MtrunA17_Chr1g0203441 50.467 107 53 0 8 114 14 120 5.50e-34 123
Msa0856490 MtrunA17_Chr1g0154031 51.923 104 50 0 7 110 76 179 5.86e-34 126
Msa0856490 MtrunA17_Chr7g0271241 51.667 120 58 0 7 126 12 131 1.27e-33 125
Msa0856490 MtrunA17_Chr6g0487491 49.573 117 50 2 7 114 12 128 1.56e-33 122
Msa0856490 MtrunA17_Chr4g0072751 56.000 100 43 1 7 105 12 111 1.72e-33 124
Msa0856490 MtrunA17_Chr1g0194301 46.281 121 65 0 2 122 28 148 1.97e-33 122
Msa0856490 MtrunA17_Chr6g0470971 52.427 103 49 0 8 110 15 117 2.21e-33 122
Msa0856490 MtrunA17_Chr2g0327351 55.000 100 44 1 7 105 12 111 3.11e-33 122
Msa0856490 MtrunA17_Chr3g0088461 50.459 109 54 0 3 111 18 126 3.28e-33 123
Msa0856490 MtrunA17_Chr2g0311221 50.000 100 50 0 7 106 14 113 6.59e-33 122
Msa0856490 MtrunA17_Chr6g0450101 52.381 105 50 0 7 111 14 118 7.68e-33 119
Msa0856490 MtrunA17_Chr8g0342481 50.000 112 55 1 3 113 8 119 1.04e-32 123
Msa0856490 MtrunA17_Chr2g0322521 49.524 105 53 0 6 110 28 132 3.98e-32 121
Msa0856490 MtrunA17_Chr1g0192411 48.624 109 56 0 3 111 8 116 5.50e-32 121
Msa0856490 MtrunA17_Chr5g0434861 57.547 106 43 2 147 252 17 120 6.64e-32 113
Msa0856490 MtrunA17_Chr5g0397231 49.515 103 52 0 3 105 8 110 9.24e-32 119
Msa0856490 MtrunA17_Chr4g0030881 49.091 110 49 1 8 110 8 117 1.72e-31 116
Msa0856490 MtrunA17_Chr4g0068921 46.875 128 67 1 2 129 19 145 1.19e-30 112
Msa0856490 MtrunA17_Chr1g0180391 49.524 105 53 0 7 111 19 123 3.10e-30 112
Msa0856490 MtrunA17_Chr2g0293911 48.276 116 60 0 7 122 24 139 5.40e-30 114
Msa0856490 MtrunA17_Chr5g0395221 53.846 78 36 0 6 83 11 88 5.77e-27 100
Msa0856490 MtrunA17_Chr4g0042611 57.143 77 33 0 7 83 12 88 9.95e-27 99.4
Msa0856490 MtrunA17_Chr5g0440781 43.689 103 57 1 8 109 13 115 1.41e-26 102
Msa0856490 MtrunA17_Chr7g0247131 45.192 104 52 1 39 137 10 113 4.00e-26 102
Msa0856490 MtrunA17_Chr5g0440761 43.689 103 57 1 8 109 13 115 5.32e-26 102
Msa0856490 MtrunA17_Chr5g0441141 43.689 103 57 1 8 109 13 115 7.10e-26 102
Msa0856490 MtrunA17_Chr2g0294811 48.864 88 45 0 6 93 11 98 7.37e-26 98.2
Msa0856490 MtrunA17_Chr2g0323321 47.368 95 50 0 6 100 10 104 8.51e-26 97.8
Msa0856490 MtrunA17_Chr3g0099141 49.398 83 42 0 7 89 40 122 1.07e-25 98.2
Msa0856490 MtrunA17_Chr5g0434871 80.000 70 14 0 69 138 2 71 1.28e-25 95.9
Msa0856490 MtrunA17_Chr5g0401731 39.683 126 75 1 9 134 15 139 1.84e-25 102
Msa0856490 MtrunA17_Chr5g0441131 42.718 103 58 1 8 109 10 112 4.63e-25 97.8
Msa0856490 MtrunA17_Chr4g0008551 41.593 113 65 1 9 121 38 149 7.13e-25 100
Msa0856490 MtrunA17_Chr8g0342531 41.284 109 59 1 3 106 8 116 1.37e-24 96.3
Msa0856490 MtrunA17_Chr8g0334881 45.946 111 57 2 7 116 10 118 7.73e-24 97.8
Msa0856490 MtrunA17_Chr1g0157731 42.991 107 60 1 7 113 89 194 1.22e-23 99.8
Msa0856490 MtrunA17_Chr6g0454921 37.063 143 75 3 9 141 15 152 1.33e-23 94.7
Msa0856490 MtrunA17_Chr4g0053431 42.857 105 59 1 9 113 5 108 2.10e-23 95.5
Msa0856490 MtrunA17_Chr3g0139671 42.991 107 60 1 7 113 83 188 2.94e-23 98.6
Msa0856490 MtrunA17_Chr8g0342511 50.000 80 40 0 3 82 8 87 3.37e-23 90.5
Msa0856490 MtrunA17_Chr7g0238631 45.714 105 56 1 7 111 111 214 8.68e-23 97.1
Msa0856490 MtrunA17_Chr5g0429661 34.395 157 91 3 2 155 115 262 2.76e-22 94.0
Msa0856490 MtrunA17_Chr3g0133601 42.718 103 58 1 9 111 37 138 3.95e-22 91.3
Msa0856490 MtrunA17_Chr4g0013361 41.818 110 62 2 2 109 4 113 5.12e-22 92.4
Msa0856490 MtrunA17_Chr7g0238651 43.564 101 55 1 12 110 10 110 1.65e-21 92.0
Msa0856490 MtrunA17_Chr4g0058991 43.689 103 55 2 9 110 209 309 3.58e-21 92.0
Msa0856490 MtrunA17_Chr5g0417621 41.121 107 62 1 9 115 134 239 5.14e-21 91.3
Msa0856490 MtrunA17_Chr7g0228531 42.500 120 64 3 9 128 220 334 1.18e-20 90.1
Msa0856490 MtrunA17_Chr8g0342461 49.351 77 38 1 9 84 14 90 2.17e-20 84.3
Msa0856490 MtrunA17_Chr4g0042501 40.196 102 60 1 9 110 105 205 5.60e-20 88.2
Msa0856490 MtrunA17_Chr3g0117511 41.748 103 57 2 9 110 183 283 6.70e-20 88.2
Msa0856490 MtrunA17_Chr8g0342471 48.052 77 39 1 9 84 14 90 7.39e-20 83.2
Msa0856490 MtrunA17_Chr6g0480581 42.268 97 55 1 9 105 4 99 9.38e-20 85.1
Msa0856490 MtrunA17_Chr3g0125801 40.367 109 64 1 2 110 9 116 2.30e-19 85.1
Msa0856490 MtrunA17_Chr3g0093811 52.055 73 35 0 39 111 14 86 6.12e-19 83.6
Msa0856490 MtrunA17_Chr6g0453751 40.860 93 46 2 5 88 18 110 1.57e-18 79.3
Msa0856490 MtrunA17_Chr6g0460661 36.522 115 70 2 9 121 16 129 2.62e-18 79.3
Msa0856490 MtrunA17_Chr7g0254261 39.216 102 61 1 9 110 89 189 1.84e-17 80.5
Msa0856490 MtrunA17_Chr5g0425591 40.244 82 48 1 8 88 10 91 2.30e-17 75.1
Msa0856490 MtrunA17_Chr6g0460671 37.963 108 66 1 3 110 93 199 4.80e-17 79.3
Msa0856490 MtrunA17_Chr5g0434881 73.171 41 11 0 1 41 1 41 1.24e-16 71.6
Msa0856490 MtrunA17_Chr5g0437321 38.835 103 54 2 9 107 19 116 1.97e-16 77.0
Msa0856490 MtrunA17_Chr5g0397841 40.404 99 58 1 7 105 108 205 2.03e-16 78.2
Msa0856490 MtrunA17_Chr7g0228401 32.857 140 69 4 12 128 258 395 3.66e-16 77.4
Msa0856490 MtrunA17_Chr7g0228481 39.167 120 68 4 9 128 220 334 6.03e-16 76.6
Msa0856490 MtrunA17_Chr1g0177901 45.455 66 36 0 43 108 27 92 1.33e-13 67.8
Msa0856490 MtrunA17_Chr8g0362231 35.455 110 69 2 12 121 25 132 3.87e-13 68.6
Msa0856490 MtrunA17_Chr1g0193901 49.123 57 28 1 7 62 11 67 1.53e-12 62.8
Msa0856490 MtrunA17_Chr1g0193891 49.123 57 28 1 7 62 11 67 1.53e-12 62.8
Msa0856490 MtrunA17_Chr1g0193871 49.123 57 28 1 7 62 11 67 1.53e-12 62.8
Msa0856490 MtrunA17_Chr1g0193881 49.123 57 28 1 7 62 11 67 1.53e-12 62.8
Msa0856490 MtrunA17_Chr5g0416341 31.776 107 72 1 12 118 29 134 1.88e-12 66.6
Msa0856490 MtrunA17_Chr7g0233061 29.560 159 85 6 9 158 180 320 6.87e-12 64.7
Msa0856490 MtrunA17_Chr2g0322831 56.410 39 17 0 65 103 34 72 1.49e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0856490 AT1G66370.1 58.667 150 57 1 2 146 3 152 6.37e-56 179
Msa0856490 AT3G13540.1 48.485 165 80 2 6 170 22 181 6.47e-52 169
Msa0856490 AT1G56650.1 49.490 196 79 4 4 180 5 199 4.80e-49 162
Msa0856490 AT1G66380.1 71.296 108 31 0 3 110 4 111 6.54e-48 155
Msa0856490 AT1G66390.1 58.108 148 57 1 4 146 5 152 3.68e-47 157
Msa0856490 AT5G40330.1 51.724 145 63 1 8 152 13 150 5.93e-45 150
Msa0856490 AT5G16770.4 59.821 112 45 0 6 117 11 122 1.35e-44 153
Msa0856490 AT5G16770.3 59.821 112 45 0 6 117 11 122 1.35e-44 153
Msa0856490 AT5G16770.1 59.821 112 45 0 6 117 11 122 2.21e-44 152
Msa0856490 AT5G16770.2 59.821 112 45 0 6 117 11 122 2.21e-44 152
Msa0856490 AT3G27920.1 62.264 106 40 0 8 113 15 120 3.10e-44 149
Msa0856490 AT3G30210.1 38.723 235 128 6 6 233 26 251 4.18e-44 150
Msa0856490 AT5G14750.1 63.462 104 38 0 8 111 17 120 4.42e-44 148
Msa0856490 AT3G61250.1 50.725 138 64 1 6 143 11 144 5.21e-44 150
Msa0856490 AT1G22640.1 57.522 113 48 0 7 119 12 124 6.95e-44 149
Msa0856490 AT4G38620.1 49.660 147 69 3 9 151 14 159 2.68e-43 148
Msa0856490 AT3G02940.2 57.143 112 48 0 6 117 11 122 1.23e-42 147
Msa0856490 AT2G16720.1 56.757 111 48 0 7 117 12 122 1.30e-42 146
Msa0856490 AT4G21440.1 57.143 112 48 0 6 117 11 122 1.59e-42 148
Msa0856490 AT3G02940.1 57.143 112 48 0 6 117 11 122 1.65e-42 147
Msa0856490 AT3G02940.3 57.143 112 48 0 6 117 11 122 1.65e-42 147
Msa0856490 AT4G09460.1 50.388 129 63 1 9 136 14 142 3.32e-42 144
Msa0856490 AT3G01140.2 49.635 137 69 0 6 142 11 147 4.17e-42 147
Msa0856490 AT4G17785.2 56.637 113 49 0 5 117 11 123 7.25e-42 146
Msa0856490 AT4G17785.1 55.085 118 53 0 5 122 11 128 8.71e-42 146
Msa0856490 AT3G01140.1 49.635 137 69 0 6 142 54 190 1.07e-41 147
Msa0856490 AT3G47600.1 60.377 106 42 0 6 111 11 116 1.12e-41 145
Msa0856490 AT5G65230.1 54.464 112 51 0 6 117 11 122 1.34e-41 144
Msa0856490 AT5G35550.1 46.199 171 82 3 7 169 14 182 1.35e-41 143
Msa0856490 AT4G05100.1 54.310 116 53 0 2 117 8 123 2.11e-41 144
Msa0856490 AT5G49330.1 57.407 108 46 0 6 113 11 118 2.34e-41 145
Msa0856490 AT3G28910.1 60.377 106 42 0 6 111 11 116 2.36e-41 144
Msa0856490 AT5G62470.2 59.434 106 43 0 6 111 11 116 3.27e-41 144
Msa0856490 AT4G34990.1 55.963 109 48 0 9 117 14 122 6.54e-41 142
Msa0856490 AT4G28110.1 52.679 112 53 0 6 117 11 122 7.90e-41 142
Msa0856490 AT5G15310.1 55.357 112 50 0 6 117 11 122 9.05e-41 143
Msa0856490 AT5G15310.4 55.357 112 50 0 6 117 11 122 9.88e-41 140
Msa0856490 AT5G15310.2 55.357 112 50 0 6 117 11 122 1.05e-40 142
Msa0856490 AT5G52600.1 61.538 104 40 0 7 110 12 115 1.35e-40 139
Msa0856490 AT3G23250.1 48.571 140 66 2 6 145 11 144 1.44e-40 141
Msa0856490 AT1G74650.1 58.491 106 44 0 7 112 12 117 2.22e-40 142
Msa0856490 AT5G10280.1 53.571 112 52 0 6 117 11 122 3.51e-40 141
Msa0856490 AT1G06180.1 54.400 125 56 1 6 130 11 134 4.52e-40 139
Msa0856490 AT1G18570.1 47.143 140 73 1 6 144 12 151 4.59e-40 142
Msa0856490 AT1G35515.1 53.153 111 52 0 7 117 12 122 5.75e-40 137
Msa0856490 AT1G34670.1 54.464 112 51 0 6 117 11 122 6.20e-40 142
Msa0856490 AT5G54230.1 54.955 111 50 0 7 117 12 122 6.67e-40 140
Msa0856490 AT1G08810.1 54.167 120 53 1 6 125 11 128 7.62e-40 139
Msa0856490 AT5G61420.2 53.571 112 52 0 6 117 11 122 8.49e-40 141
Msa0856490 AT5G07700.1 54.464 112 51 0 6 117 11 122 9.41e-40 140
Msa0856490 AT5G07700.2 54.464 112 51 0 6 117 11 122 9.41e-40 140
Msa0856490 AT5G62470.1 59.434 106 42 1 6 111 11 115 1.10e-39 140
Msa0856490 AT5G07690.1 53.571 112 52 0 6 117 11 122 1.39e-39 140
Msa0856490 AT2G31180.1 56.604 106 46 0 6 111 11 116 2.31e-39 137
Msa0856490 AT1G74080.1 50.893 112 55 0 6 117 11 122 7.80e-39 138
Msa0856490 AT5G56110.1 54.955 111 50 0 7 117 12 122 1.10e-38 137
Msa0856490 AT2G47460.1 54.717 106 48 0 6 111 11 116 2.27e-38 137
Msa0856490 AT3G62610.1 56.604 106 46 0 6 111 11 116 3.53e-38 136
Msa0856490 AT4G01680.3 57.143 105 45 0 7 111 12 116 3.79e-38 134
Msa0856490 AT5G60890.1 53.774 106 49 0 6 111 11 116 6.16e-38 134
Msa0856490 AT1G74430.1 50.000 122 61 0 6 127 11 132 6.88e-38 134
Msa0856490 AT4G37780.1 54.128 109 49 1 6 113 11 119 1.37e-37 134
Msa0856490 AT4G01680.1 57.143 105 45 0 7 111 12 116 1.81e-37 134
Msa0856490 AT5G62320.1 40.884 181 87 6 6 170 12 188 3.20e-37 131
Msa0856490 AT4G26930.1 43.243 148 83 1 7 153 19 166 3.88e-37 135
Msa0856490 AT1G57560.2 52.252 111 53 0 7 117 12 122 4.12e-37 132
Msa0856490 AT5G65790.1 50.407 123 60 1 7 128 12 134 4.68e-37 134
Msa0856490 AT1G57560.1 52.252 111 53 0 7 117 12 122 5.37e-37 132
Msa0856490 AT5G57620.1 47.552 143 71 2 7 145 12 154 5.61e-37 133
Msa0856490 AT1G16490.1 40.000 155 91 1 7 161 14 166 1.13e-36 130
Msa0856490 AT3G13890.2 51.351 111 54 0 3 113 8 118 2.85e-36 132
Msa0856490 AT2G32460.1 52.830 106 50 0 5 110 16 121 3.06e-36 134
Msa0856490 AT3G46130.1 53.153 111 52 0 1 111 3 113 3.22e-36 129
Msa0856490 AT2G32460.2 52.830 106 50 0 5 110 4 109 3.24e-36 134
Msa0856490 AT5G26660.1 39.674 184 104 3 7 185 12 193 3.74e-36 131
Msa0856490 AT3G49690.1 54.206 107 48 1 7 112 12 118 3.75e-36 130
Msa0856490 AT4G22680.1 41.781 146 75 1 6 151 11 146 4.64e-36 129
Msa0856490 AT4G12350.1 52.252 111 53 0 7 117 12 122 4.65e-36 129
Msa0856490 AT5G59780.3 53.846 104 48 0 8 111 9 112 8.77e-36 127
Msa0856490 AT3G24310.1 52.500 120 54 1 6 125 17 133 9.13e-36 128
Msa0856490 AT5G55020.1 55.340 103 46 0 7 109 26 128 1.28e-35 133
Msa0856490 AT5G23000.1 47.222 144 73 2 7 147 12 155 1.60e-35 129
Msa0856490 AT1G25340.1 52.679 112 53 0 8 119 19 130 1.92e-35 128
Msa0856490 AT1G79180.1 47.368 114 60 0 7 120 14 127 3.20e-35 127
Msa0856490 AT1G66230.1 53.774 106 49 0 6 111 11 116 3.39e-35 127
Msa0856490 AT4G13480.1 50.806 124 60 1 8 131 7 129 3.68e-35 126
Msa0856490 AT1G09540.1 45.385 130 71 0 7 136 12 141 3.87e-35 129
Msa0856490 AT3G01530.1 52.294 109 52 0 7 115 25 133 4.40e-35 125
Msa0856490 AT1G18710.1 51.887 106 51 0 6 111 11 116 6.15e-35 126
Msa0856490 AT2G47190.1 41.818 165 83 3 7 161 20 181 7.79e-35 126
Msa0856490 AT5G16600.1 44.203 138 71 1 6 137 11 148 1.17e-34 127
Msa0856490 AT5G12870.1 49.074 108 55 0 4 111 15 122 1.47e-34 125
Msa0856490 AT1G68320.1 52.212 113 54 0 7 119 19 131 2.08e-34 125
Msa0856490 AT5G06100.1 48.113 106 55 0 5 110 30 135 3.41e-34 128
Msa0856490 AT4G01680.2 51.282 117 45 1 7 111 12 128 4.62e-34 125
Msa0856490 AT2G26960.1 50.476 105 52 0 5 109 18 122 7.02e-34 127
Msa0856490 AT5G06100.5 48.113 106 55 0 5 110 30 135 7.19e-34 128
Msa0856490 AT5G06100.2 48.113 106 55 0 5 110 30 135 7.19e-34 128
Msa0856490 AT5G06100.3 48.113 106 55 0 5 110 30 135 7.19e-34 128
Msa0856490 AT5G06100.4 48.113 106 55 0 5 110 30 135 7.19e-34 128
Msa0856490 AT3G12720.1 48.649 111 57 0 7 117 22 132 9.04e-34 124
Msa0856490 AT2G36890.1 53.211 109 50 1 7 114 12 120 1.08e-33 124
Msa0856490 AT5G40350.1 46.400 125 67 0 7 131 17 141 1.08e-33 121
Msa0856490 AT5G14340.1 50.000 112 56 0 6 117 23 134 1.25e-33 123
Msa0856490 AT3G28470.1 54.545 99 45 0 7 105 12 110 1.52e-33 124
Msa0856490 AT2G36890.2 53.211 109 50 1 7 114 53 161 1.92e-33 124
Msa0856490 AT3G12820.1 49.057 106 54 0 7 112 14 119 1.93e-33 121
Msa0856490 AT3G48920.1 42.069 145 69 1 1 145 12 141 2.41e-33 122
Msa0856490 AT4G25560.1 37.705 183 102 3 8 187 11 184 2.44e-33 122
Msa0856490 AT1G56160.1 44.355 124 69 0 7 130 14 137 2.76e-33 122
Msa0856490 AT3G13890.1 47.500 120 54 1 3 113 8 127 2.83e-33 124
Msa0856490 AT1G48000.1 47.368 133 67 2 7 139 32 161 4.08e-33 120
Msa0856490 AT3G11440.2 47.115 104 55 0 7 110 41 144 5.00e-33 125
Msa0856490 AT3G11440.3 47.115 104 55 0 7 110 41 144 1.06e-32 125
Msa0856490 AT3G11440.4 47.115 104 55 0 7 110 41 144 1.06e-32 125
Msa0856490 AT3G11440.1 47.115 104 55 0 7 110 41 144 1.06e-32 125
Msa0856490 AT1G63910.1 47.706 109 57 0 3 111 8 116 1.46e-32 122
Msa0856490 AT3G27810.1 41.667 144 80 1 7 150 20 159 1.94e-32 118
Msa0856490 AT3G08500.1 52.381 105 50 0 7 111 30 134 2.23e-32 121
Msa0856490 AT1G25340.2 50.893 112 50 1 8 119 19 125 4.20e-32 119
Msa0856490 AT1G25340.3 50.893 112 50 1 8 119 19 125 7.38e-32 119
Msa0856490 AT3G53200.1 52.885 104 49 0 7 110 9 112 1.09e-31 117
Msa0856490 AT5G14750.3 66.667 78 23 1 34 111 12 86 7.67e-31 112
Msa0856490 AT1G66380.2 57.426 101 42 1 3 102 4 104 9.13e-31 110
Msa0856490 AT3G06490.1 47.287 129 67 1 1 129 13 140 5.55e-30 114
Msa0856490 AT1G79180.2 36.054 147 61 1 7 120 14 160 6.24e-29 112
Msa0856490 AT1G66380.3 75.000 72 18 0 39 110 7 78 7.42e-29 105
Msa0856490 AT5G49620.1 45.736 129 69 1 1 129 20 147 1.14e-28 110
Msa0856490 AT5G35550.2 66.667 72 24 0 40 111 50 121 1.60e-28 109
Msa0856490 AT5G52260.1 49.533 107 54 0 8 114 13 119 1.87e-28 109
Msa0856490 AT3G47600.2 65.278 72 25 0 40 111 39 110 2.61e-26 105
Msa0856490 AT2G26950.1 42.574 101 58 0 5 105 14 114 1.28e-25 103
Msa0856490 AT3G09230.1 44.915 118 61 2 5 119 48 164 1.46e-25 103
Msa0856490 AT5G49620.2 41.259 143 69 2 1 129 20 161 4.27e-25 101
Msa0856490 AT5G26660.2 37.179 156 91 3 35 185 9 162 6.12e-25 101
Msa0856490 AT3G53200.2 58.904 73 30 0 38 110 7 79 1.52e-24 97.4
Msa0856490 AT5G59780.2 58.108 74 31 0 38 111 18 91 3.02e-24 97.1
Msa0856490 AT5G11510.3 44.762 105 57 1 7 111 79 182 6.44e-24 100
Msa0856490 AT5G11510.1 44.762 105 57 1 7 111 79 182 6.44e-24 100
Msa0856490 AT5G11510.4 44.762 105 57 1 7 111 79 182 6.44e-24 100
Msa0856490 AT3G46130.4 58.108 74 31 0 38 111 18 91 6.78e-24 96.7
Msa0856490 AT5G11510.5 44.762 105 57 1 7 111 79 182 8.47e-24 100
Msa0856490 AT5G11510.2 44.762 105 57 1 7 111 79 182 8.56e-24 100
Msa0856490 AT2G23290.1 45.098 102 55 1 9 110 13 113 2.02e-23 96.7
Msa0856490 AT3G46130.3 57.534 73 31 0 39 111 9 81 2.20e-23 95.1
Msa0856490 AT3G09370.2 45.192 104 56 1 7 110 133 235 2.57e-23 98.6
Msa0856490 AT3G09370.1 45.192 104 56 1 7 110 128 230 2.81e-23 98.6
Msa0856490 AT5G02320.1 44.762 105 57 1 7 111 125 228 2.82e-23 98.6
Msa0856490 AT5G02320.2 44.762 105 57 1 7 111 125 228 2.82e-23 98.6
Msa0856490 AT3G09370.3 45.192 104 56 1 7 110 141 243 2.97e-23 98.6
Msa0856490 AT5G02320.3 44.762 105 57 1 7 111 65 168 3.69e-23 98.2
Msa0856490 AT3G60460.1 43.269 104 58 1 7 109 11 114 4.61e-23 95.5
Msa0856490 AT4G37260.1 43.137 102 57 1 9 110 13 113 4.61e-23 95.9
Msa0856490 AT3G12820.2 54.286 70 32 0 43 112 2 71 8.66e-23 92.4
Msa0856490 AT1G69560.2 38.060 134 77 3 6 138 120 248 9.34e-23 95.5
Msa0856490 AT1G69560.1 38.060 134 77 3 6 138 104 232 1.00e-22 95.1
Msa0856490 AT3G55730.1 44.340 106 58 1 5 110 52 156 1.50e-22 95.5
Msa0856490 AT4G32730.5 42.342 111 55 2 7 113 85 190 1.85e-22 96.7
Msa0856490 AT4G32730.4 42.342 111 55 2 7 113 85 190 1.85e-22 96.7
Msa0856490 AT4G32730.3 42.342 111 55 2 7 113 85 190 1.85e-22 96.7
Msa0856490 AT4G32730.2 42.342 111 55 2 7 113 85 190 1.85e-22 96.7
Msa0856490 AT2G37630.1 41.379 116 60 2 12 125 7 116 1.88e-22 95.1
Msa0856490 AT4G32730.1 42.342 111 55 2 7 113 85 190 2.02e-22 96.3
Msa0856490 AT2G39880.1 44.340 106 50 2 9 110 50 150 3.57e-22 94.4
Msa0856490 AT5G14750.4 50.000 90 41 1 53 142 1 86 3.77e-22 89.4
Msa0856490 AT5G14750.2 50.000 90 41 1 53 142 1 86 3.77e-22 89.4
Msa0856490 AT5G67300.1 44.118 102 56 1 9 110 6 106 4.38e-22 93.2
Msa0856490 AT4G18770.1 42.202 109 54 2 7 111 215 318 9.17e-22 93.6
Msa0856490 AT1G26780.1 34.969 163 98 3 7 162 96 257 1.07e-21 91.7
Msa0856490 AT1G26780.2 34.969 163 98 3 7 162 96 257 1.08e-21 92.8
Msa0856490 AT1G22640.3 55.224 67 30 0 53 119 1 67 2.23e-21 89.0
Msa0856490 AT5G40350.2 44.565 92 51 0 40 131 5 96 5.52e-21 87.0
Msa0856490 AT3G50060.1 42.157 102 58 1 9 110 6 106 1.06e-20 89.4
Msa0856490 AT1G18960.1 40.777 103 58 2 9 111 10 109 1.65e-20 89.0
Msa0856490 AT3G27810.2 39.640 111 63 1 40 150 4 110 3.59e-20 85.1
Msa0856490 AT1G17950.1 40.196 102 60 1 9 110 5 105 4.82e-20 86.7
Msa0856490 AT3G27785.1 43.137 102 57 1 9 110 189 289 5.79e-20 88.6
Msa0856490 AT1G71030.2 49.315 73 37 0 45 117 4 76 6.34e-20 84.7
Msa0856490 AT1G71030.1 49.315 73 37 0 45 117 18 90 9.78e-20 84.3
Msa0856490 AT5G17800.1 36.441 118 74 1 3 120 87 203 1.08e-19 87.0
Msa0856490 AT5G58850.1 33.862 189 118 5 4 190 100 283 1.18e-19 87.8
Msa0856490 AT4G33450.1 37.864 103 63 1 8 110 18 119 9.52e-19 83.2
Msa0856490 AT1G73410.1 41.441 111 56 2 9 115 6 111 1.09e-18 82.8
Msa0856490 AT1G73410.2 41.441 111 56 2 9 115 6 111 1.38e-18 81.6
Msa0856490 AT5G11050.1 36.792 106 66 1 5 110 101 205 2.41e-18 84.0
Msa0856490 AT5G40360.1 40.777 103 60 1 7 109 156 257 4.86e-18 82.8
Msa0856490 AT3G23250.2 45.161 93 45 2 53 145 1 87 7.29e-18 80.1
Msa0856490 AT3G29020.1 30.657 137 92 2 4 138 60 195 6.53e-17 77.8
Msa0856490 AT3G29020.2 33.929 112 73 1 4 115 62 172 1.26e-16 78.2
Msa0856490 AT5G39700.1 35.965 114 72 1 2 115 49 161 1.40e-16 75.9
Msa0856490 AT2G25230.1 37.755 98 60 1 12 109 29 125 1.56e-15 73.9
Msa0856490 AT4G00540.2 38.889 108 62 2 7 111 101 207 1.64e-15 75.9
Msa0856490 AT4G00540.1 38.889 108 62 2 7 111 99 205 1.82e-15 75.9
Msa0856490 AT5G40430.1 34.951 103 65 2 7 109 52 152 1.91e-13 68.6
Msa0856490 AT1G14350.2 28.571 126 89 1 12 137 28 152 1.03e-12 67.8
Msa0856490 AT1G14350.1 28.571 126 89 1 12 137 28 152 1.03e-12 67.8
Msa0856490 AT2G02820.3 31.776 107 72 1 12 118 33 138 1.72e-12 66.6
Msa0856490 AT2G02820.2 31.776 107 72 1 12 118 33 138 1.98e-12 67.0
Msa0856490 AT2G02820.1 31.776 107 72 1 12 118 33 138 2.14e-12 66.6
Msa0856490 AT1G74650.3 65.854 41 14 0 72 112 1 41 3.28e-12 65.1
Msa0856490 AT3G28910.2 67.500 40 13 0 72 111 1 40 4.82e-12 64.3
Msa0856490 AT3G18100.3 30.769 156 89 4 5 155 494 635 7.71e-12 65.5
Msa0856490 AT3G18100.1 30.769 156 89 4 5 155 542 683 8.12e-12 65.5
Msa0856490 AT3G18100.2 30.769 156 89 4 5 155 329 470 1.18e-11 64.7
Msa0856490 AT3G18100.4 30.769 156 89 4 5 155 381 522 1.22e-11 64.7
Msa0856490 AT4G25560.2 32.540 126 73 3 65 187 2 118 2.54e-11 62.0

Find 47 sgRNAs with CRISPR-Local

Find 264 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCTTTCTCTGTTGATATT+GGG 0.193067 5_4:-51193708 None:intergenic
CAAATGTTGATGACTTCTTT+TGG 0.209425 5_4:+51194338 Msa0856490:CDS
GTTCATTATACCTGTTCTTT+TGG 0.213130 5_4:-51192208 None:intergenic
GAAGAAGTTGAAAGAGTTAT+AGG 0.215598 5_4:-51194055 None:intergenic
AATGCTTTCTCTGTTGATAT+TGG 0.254863 5_4:-51193709 None:intergenic
GAATGTGGTCGGACAGTTTA+TGG 0.256836 5_4:+51194233 Msa0856490:CDS
TCTTTATTTAAATTCAATAT+TGG 0.268308 5_4:-51194094 None:intergenic
CAATCTCTACCAATTTGATT+TGG 0.311300 5_4:-51194163 None:intergenic
ACAAGTATGGTGAAGGAAAA+TGG 0.332221 5_4:+51192175 Msa0856490:CDS
ATTATGGTTCCAAATCAAAT+TGG 0.344731 5_4:+51194154 Msa0856490:CDS
TGATGGCTCATCAGAGATTA+TGG 0.349877 5_4:+51194138 Msa0856490:CDS
CAAGTAAACAGTGACAAAAT+TGG 0.354364 5_4:+51194268 Msa0856490:CDS
AGAAGAGAACAACTTTGATA+TGG 0.390818 5_4:+51194309 Msa0856490:CDS
CAAAAGAAGTCATCAACATT+TGG 0.398367 5_4:-51194337 None:intergenic
AAGGCTTACATTCACAAGTA+TGG 0.413593 5_4:+51192162 Msa0856490:CDS
GTCGGACAGTTTATGGAACT+TGG 0.426674 5_4:+51194240 Msa0856490:CDS
TGCTTTCTCTGTTGATATTG+GGG 0.446499 5_4:-51193707 None:intergenic
ACATCATTAGCTGTTCTACT+AGG 0.453688 5_4:-51193917 None:intergenic
GTTGAAAGAGTTATAGGTCG+AGG 0.455038 5_4:-51194049 None:intergenic
CATTTAATTCCCAAAAGAAC+AGG 0.464950 5_4:+51192198 Msa0856490:CDS
TACACAATCTCCTAGGGAAT+AGG 0.470153 5_4:+51193763 Msa0856490:CDS
TAAAGATAGTAAAATTATCA+TGG 0.479494 5_4:+51194111 Msa0856490:CDS
ACAAGGCTACACAATCTCCT+AGG 0.480777 5_4:+51193756 Msa0856490:CDS
GATCATATCAGCTTCATCTT+CGG 0.502741 5_4:-51193733 None:intergenic
TGCAATTGACAGGATTGAAT+AGG 0.503030 5_4:+51193643 Msa0856490:intron
AAAAGGTCCATGGACATATG+AGG 0.521159 5_4:+51192125 Msa0856490:CDS
CGACCACATTCCACATGGTA+CGG 0.521479 5_4:-51194221 None:intergenic
AATACCAGAGGTTTGAGAAA+AGG 0.525322 5_4:+51192108 Msa0856490:CDS
GAATACACATCTGCGGAAGA+AGG 0.540518 5_4:+51193952 Msa0856490:CDS
GACCACATTCCACATGGTAC+GGG 0.540744 5_4:-51194220 None:intergenic
TGGAAGCTTACCTATTCCCT+AGG 0.563710 5_4:-51193773 None:intergenic
TACATTCACAAGTATGGTGA+AGG 0.567911 5_4:+51192168 Msa0856490:CDS
TCTGCTTCACAACTAAGTCT+AGG 0.573391 5_4:+51194190 Msa0856490:CDS
TTGTCTTCCTCATATGTCCA+TGG 0.575291 5_4:-51192132 None:intergenic
AGAGAACAACTTTGATATGG+AGG 0.585265 5_4:+51194312 Msa0856490:CDS
GAGGTTTGAGAAAAGGTCCA+TGG 0.586834 5_4:+51192115 Msa0856490:CDS
CAAGGCTACACAATCTCCTA+GGG 0.605920 5_4:+51193757 Msa0856490:CDS
AAAATTATCATGGATCGTGA+TGG 0.613433 5_4:+51194121 Msa0856490:CDS
TGAGGAAGACAACTTACTCA+AGG 0.621512 5_4:+51192143 Msa0856490:CDS
CTGTCCGACCACATTCCACA+TGG 0.629677 5_4:-51194226 None:intergenic
CGTACCATGTGGAATGTGGT+CGG 0.646204 5_4:+51194222 Msa0856490:CDS
TTCCCGTACCATGTGGAATG+TGG 0.662970 5_4:+51194218 Msa0856490:CDS
ATGAAGCTGATATGATCACA+AGG 0.671254 5_4:+51193739 Msa0856490:CDS
GATGGTCATTGATTGCTGCA+AGG 0.678842 5_4:+51193891 Msa0856490:intron
GGTAATGTTCCCGTACCATG+TGG 0.682093 5_4:+51194211 Msa0856490:CDS
ACTATTGGAATACACATCTG+CGG 0.687334 5_4:+51193945 Msa0856490:CDS
GTGCGTATGGAGAATACCAG+AGG 0.702990 5_4:+51192096 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAATACTATATATTTTTATA+TGG - chr5_4:51192930-51192949 None:intergenic 10.0%
!!! TCTTTATTTAAATTCAATAT+TGG - chr5_4:51194097-51194116 None:intergenic 10.0%
!!! CAATACTATATATTTTTATA+TGG - chr5_4:51192930-51192949 None:intergenic 10.0%
!!! TCTTTATTTAAATTCAATAT+TGG - chr5_4:51194097-51194116 None:intergenic 10.0%
!! AAGTAAATAAAATTATGCAT+GGG - chr5_4:51192305-51192324 None:intergenic 15.0%
!! AAAGTAAATAAAATTATGCA+TGG - chr5_4:51192306-51192325 None:intergenic 15.0%
!! AACATTCAAATTTATATGTA+CGG - chr5_4:51192561-51192580 None:intergenic 15.0%
!!! CACTTTTTTAATTAATAGTA+TGG + chr5_4:51192586-51192605 Msa0856490:intron 15.0%
!!! AACCTATATTTAATTCTTTT+TGG + chr5_4:51193070-51193089 Msa0856490:intron 15.0%
!! ATATGCAAATATAATAAAAG+TGG + chr5_4:51193107-51193126 Msa0856490:intron 15.0%
!! TATGCAAATATAATAAAAGT+GGG + chr5_4:51193108-51193127 Msa0856490:intron 15.0%
!! AAATATTGATATATATAGCT+AGG - chr5_4:51193815-51193834 None:intergenic 15.0%
!! ATTTATACATATAATGTAGA+TGG + chr5_4:51193873-51193892 Msa0856490:intron 15.0%
!! TAAAGATAGTAAAATTATCA+TGG + chr5_4:51194111-51194130 Msa0856490:CDS 15.0%
!! AAGTAAATAAAATTATGCAT+GGG - chr5_4:51192305-51192324 None:intergenic 15.0%
!! AAAGTAAATAAAATTATGCA+TGG - chr5_4:51192306-51192325 None:intergenic 15.0%
!! AACATTCAAATTTATATGTA+CGG - chr5_4:51192561-51192580 None:intergenic 15.0%
!!! CACTTTTTTAATTAATAGTA+TGG + chr5_4:51192586-51192605 Msa0856490:intron 15.0%
!!! AACCTATATTTAATTCTTTT+TGG + chr5_4:51193070-51193089 Msa0856490:intron 15.0%
!! ATATGCAAATATAATAAAAG+TGG + chr5_4:51193107-51193126 Msa0856490:intron 15.0%
!! TATGCAAATATAATAAAAGT+GGG + chr5_4:51193108-51193127 Msa0856490:intron 15.0%
!! AAATATTGATATATATAGCT+AGG - chr5_4:51193815-51193834 None:intergenic 15.0%
!! ATTTATACATATAATGTAGA+TGG + chr5_4:51193873-51193892 Msa0856490:intron 15.0%
!! TAAAGATAGTAAAATTATCA+TGG + chr5_4:51194111-51194130 Msa0856490:CDS 15.0%
!! AAAAACATAATAATCTGTGA+CGG - chr5_4:51192339-51192358 None:intergenic 20.0%
!! TTTCTTAACATTTGTCTTAA+GGG - chr5_4:51192709-51192728 None:intergenic 20.0%
!!! AGAAGATGAAAGATAAATTT+TGG - chr5_4:51193007-51193026 None:intergenic 20.0%
!! TATACTAACTTATGTCTTTA+GGG - chr5_4:51193051-51193070 None:intergenic 20.0%
!! TTATACTAACTTATGTCTTT+AGG - chr5_4:51193052-51193071 None:intergenic 20.0%
!! CTCCAAAAAGAATTAAATAT+AGG - chr5_4:51193075-51193094 None:intergenic 20.0%
!!! TTAACCAATTAATTTGCATT+TGG + chr5_4:51193296-51193315 Msa0856490:intron 20.0%
!! AAAAACATAATAATCTGTGA+CGG - chr5_4:51192339-51192358 None:intergenic 20.0%
!! TTTCTTAACATTTGTCTTAA+GGG - chr5_4:51192709-51192728 None:intergenic 20.0%
!!! AGAAGATGAAAGATAAATTT+TGG - chr5_4:51193007-51193026 None:intergenic 20.0%
!! TATACTAACTTATGTCTTTA+GGG - chr5_4:51193051-51193070 None:intergenic 20.0%
!! TTATACTAACTTATGTCTTT+AGG - chr5_4:51193052-51193071 None:intergenic 20.0%
!! CTCCAAAAAGAATTAAATAT+AGG - chr5_4:51193075-51193094 None:intergenic 20.0%
!!! TTAACCAATTAATTTGCATT+TGG + chr5_4:51193296-51193315 Msa0856490:intron 20.0%
!! TTCATTATACCTGTTCTTTT+GGG - chr5_4:51192210-51192229 None:intergenic 25.0%
!! TTTTGACAAATTTTTGCTAG+AGG + chr5_4:51192356-51192375 Msa0856490:intron 25.0%
! TCAATTTAATTCAATCCGTT+TGG - chr5_4:51192512-51192531 None:intergenic 25.0%
!!! CATTGCTCTAATTTTTTAGT+GGG + chr5_4:51192616-51192635 Msa0856490:intron 25.0%
! TATGAAATATCATACGAGAA+AGG + chr5_4:51192674-51192693 Msa0856490:intron 25.0%
! GTTTCTTAACATTTGTCTTA+AGG - chr5_4:51192710-51192729 None:intergenic 25.0%
!! GACAAACCCTTTTTATATTT+GGG - chr5_4:51192736-51192755 None:intergenic 25.0%
!! AGACAAACCCTTTTTATATT+TGG - chr5_4:51192737-51192756 None:intergenic 25.0%
! CAATATAAAGTTACTACTCT+TGG - chr5_4:51192791-51192810 None:intergenic 25.0%
! AACTCCAAATGCAAATTAAT+TGG - chr5_4:51193303-51193322 None:intergenic 25.0%
! CAGTTTGTGGTTAATTTATA+AGG - chr5_4:51193350-51193369 None:intergenic 25.0%
! TATACATATATGCAATTGAC+AGG + chr5_4:51193633-51193652 Msa0856490:intron 25.0%
! CTAATGATGTGAAAAACTAT+TGG + chr5_4:51193930-51193949 Msa0856490:CDS 25.0%
! AAATGAAAAAGAGAGATCTA+AGG + chr5_4:51193997-51194016 Msa0856490:CDS 25.0%
! ATTATGGTTCCAAATCAAAT+TGG + chr5_4:51194154-51194173 Msa0856490:CDS 25.0%
!!! AAATGTTGATGACTTCTTTT+GGG + chr5_4:51194339-51194358 Msa0856490:CDS 25.0%
!! TTCATTATACCTGTTCTTTT+GGG - chr5_4:51192210-51192229 None:intergenic 25.0%
!! TTTTGACAAATTTTTGCTAG+AGG + chr5_4:51192356-51192375 Msa0856490:intron 25.0%
! TCAATTTAATTCAATCCGTT+TGG - chr5_4:51192512-51192531 None:intergenic 25.0%
!!! CATTGCTCTAATTTTTTAGT+GGG + chr5_4:51192616-51192635 Msa0856490:intron 25.0%
! TATGAAATATCATACGAGAA+AGG + chr5_4:51192674-51192693 Msa0856490:intron 25.0%
! GTTTCTTAACATTTGTCTTA+AGG - chr5_4:51192710-51192729 None:intergenic 25.0%
!! GACAAACCCTTTTTATATTT+GGG - chr5_4:51192736-51192755 None:intergenic 25.0%
!! AGACAAACCCTTTTTATATT+TGG - chr5_4:51192737-51192756 None:intergenic 25.0%
! CAATATAAAGTTACTACTCT+TGG - chr5_4:51192791-51192810 None:intergenic 25.0%
! AACTCCAAATGCAAATTAAT+TGG - chr5_4:51193303-51193322 None:intergenic 25.0%
! CAGTTTGTGGTTAATTTATA+AGG - chr5_4:51193350-51193369 None:intergenic 25.0%
! TATACATATATGCAATTGAC+AGG + chr5_4:51193633-51193652 Msa0856490:intron 25.0%
! CTAATGATGTGAAAAACTAT+TGG + chr5_4:51193930-51193949 Msa0856490:CDS 25.0%
! AAATGAAAAAGAGAGATCTA+AGG + chr5_4:51193997-51194016 Msa0856490:CDS 25.0%
! ATTATGGTTCCAAATCAAAT+TGG + chr5_4:51194154-51194173 Msa0856490:CDS 25.0%
!!! AAATGTTGATGACTTCTTTT+GGG + chr5_4:51194339-51194358 Msa0856490:CDS 25.0%
CATTTAATTCCCAAAAGAAC+AGG + chr5_4:51192198-51192217 Msa0856490:CDS 30.0%
! GTTCATTATACCTGTTCTTT+TGG - chr5_4:51192211-51192230 None:intergenic 30.0%
! CTCTAGGAAAAATTTGTCTT+TGG - chr5_4:51192403-51192422 None:intergenic 30.0%
! CAAAGACAAATTTTTCCTAG+AGG + chr5_4:51192401-51192420 Msa0856490:intron 30.0%
! GAAAAAGTACATCCAATGTT+AGG + chr5_4:51192474-51192493 Msa0856490:intron 30.0%
AATATAAGCACTCCTAACAT+TGG - chr5_4:51192489-51192508 None:intergenic 30.0%
!!! GCATTGCTCTAATTTTTTAG+TGG + chr5_4:51192615-51192634 Msa0856490:intron 30.0%
AAACCCACCCAAATATAAAA+AGG + chr5_4:51192726-51192745 Msa0856490:intron 30.0%
AACCCACCCAAATATAAAAA+GGG + chr5_4:51192727-51192746 Msa0856490:intron 30.0%
! AACCCTTTTTATATTTGGGT+GGG - chr5_4:51192732-51192751 None:intergenic 30.0%
! AAACCCTTTTTATATTTGGG+TGG - chr5_4:51192733-51192752 None:intergenic 30.0%
!! TTCTTCCTTTAGTTCTTAAC+TGG + chr5_4:51193023-51193042 Msa0856490:intron 30.0%
TATATGTACTCATAGAGAGT+AGG - chr5_4:51193188-51193207 None:intergenic 30.0%
TCTCTATGAGTACATATAAG+AGG + chr5_4:51193190-51193209 Msa0856490:intron 30.0%
GTGGGTCATGTTTATATTAT+GGG - chr5_4:51193228-51193247 None:intergenic 30.0%
TGCATGTAGTCAAAGAAAAA+GGG - chr5_4:51193250-51193269 None:intergenic 30.0%
TTGCATGTAGTCAAAGAAAA+AGG - chr5_4:51193251-51193270 None:intergenic 30.0%
!!! CTTTTGAAAATGTCGTTTTC+TGG + chr5_4:51193324-51193343 Msa0856490:intron 30.0%
ATCTTCTGTTTGGTATTAGT+TGG - chr5_4:51193478-51193497 None:intergenic 30.0%
! GTAGTTTTTCATCTTCTGTT+TGG - chr5_4:51193488-51193507 None:intergenic 30.0%
ATGCTTTCTCTGTTGATATT+GGG - chr5_4:51193711-51193730 None:intergenic 30.0%
AATGCTTTCTCTGTTGATAT+TGG - chr5_4:51193712-51193731 None:intergenic 30.0%
GAAGAAGTTGAAAGAGTTAT+AGG - chr5_4:51194058-51194077 None:intergenic 30.0%
AAAATTATCATGGATCGTGA+TGG + chr5_4:51194121-51194140 Msa0856490:CDS 30.0%
CAATCTCTACCAATTTGATT+TGG - chr5_4:51194166-51194185 None:intergenic 30.0%
CAAGTAAACAGTGACAAAAT+TGG + chr5_4:51194268-51194287 Msa0856490:CDS 30.0%
AGAAGAGAACAACTTTGATA+TGG + chr5_4:51194309-51194328 Msa0856490:CDS 30.0%
CAAAAGAAGTCATCAACATT+TGG - chr5_4:51194340-51194359 None:intergenic 30.0%
!!! CAAATGTTGATGACTTCTTT+TGG + chr5_4:51194338-51194357 Msa0856490:CDS 30.0%
CATTTAATTCCCAAAAGAAC+AGG + chr5_4:51192198-51192217 Msa0856490:CDS 30.0%
! GTTCATTATACCTGTTCTTT+TGG - chr5_4:51192211-51192230 None:intergenic 30.0%
! CTCTAGGAAAAATTTGTCTT+TGG - chr5_4:51192403-51192422 None:intergenic 30.0%
! CAAAGACAAATTTTTCCTAG+AGG + chr5_4:51192401-51192420 Msa0856490:intron 30.0%
! GAAAAAGTACATCCAATGTT+AGG + chr5_4:51192474-51192493 Msa0856490:intron 30.0%
AATATAAGCACTCCTAACAT+TGG - chr5_4:51192489-51192508 None:intergenic 30.0%
!!! GCATTGCTCTAATTTTTTAG+TGG + chr5_4:51192615-51192634 Msa0856490:intron 30.0%
AAACCCACCCAAATATAAAA+AGG + chr5_4:51192726-51192745 Msa0856490:intron 30.0%
AACCCACCCAAATATAAAAA+GGG + chr5_4:51192727-51192746 Msa0856490:intron 30.0%
! AACCCTTTTTATATTTGGGT+GGG - chr5_4:51192732-51192751 None:intergenic 30.0%
! AAACCCTTTTTATATTTGGG+TGG - chr5_4:51192733-51192752 None:intergenic 30.0%
!! TTCTTCCTTTAGTTCTTAAC+TGG + chr5_4:51193023-51193042 Msa0856490:intron 30.0%
TATATGTACTCATAGAGAGT+AGG - chr5_4:51193188-51193207 None:intergenic 30.0%
TCTCTATGAGTACATATAAG+AGG + chr5_4:51193190-51193209 Msa0856490:intron 30.0%
GTGGGTCATGTTTATATTAT+GGG - chr5_4:51193228-51193247 None:intergenic 30.0%
TGCATGTAGTCAAAGAAAAA+GGG - chr5_4:51193250-51193269 None:intergenic 30.0%
TTGCATGTAGTCAAAGAAAA+AGG - chr5_4:51193251-51193270 None:intergenic 30.0%
!!! CTTTTGAAAATGTCGTTTTC+TGG + chr5_4:51193324-51193343 Msa0856490:intron 30.0%
ATCTTCTGTTTGGTATTAGT+TGG - chr5_4:51193478-51193497 None:intergenic 30.0%
! GTAGTTTTTCATCTTCTGTT+TGG - chr5_4:51193488-51193507 None:intergenic 30.0%
ATGCTTTCTCTGTTGATATT+GGG - chr5_4:51193711-51193730 None:intergenic 30.0%
AATGCTTTCTCTGTTGATAT+TGG - chr5_4:51193712-51193731 None:intergenic 30.0%
GAAGAAGTTGAAAGAGTTAT+AGG - chr5_4:51194058-51194077 None:intergenic 30.0%
AAAATTATCATGGATCGTGA+TGG + chr5_4:51194121-51194140 Msa0856490:CDS 30.0%
CAATCTCTACCAATTTGATT+TGG - chr5_4:51194166-51194185 None:intergenic 30.0%
CAAGTAAACAGTGACAAAAT+TGG + chr5_4:51194268-51194287 Msa0856490:CDS 30.0%
AGAAGAGAACAACTTTGATA+TGG + chr5_4:51194309-51194328 Msa0856490:CDS 30.0%
CAAAAGAAGTCATCAACATT+TGG - chr5_4:51194340-51194359 None:intergenic 30.0%
!!! CAAATGTTGATGACTTCTTT+TGG + chr5_4:51194338-51194357 Msa0856490:CDS 30.0%
AATACCAGAGGTTTGAGAAA+AGG + chr5_4:51192108-51192127 Msa0856490:CDS 35.0%
AAGGCTTACATTCACAAGTA+TGG + chr5_4:51192162-51192181 Msa0856490:CDS 35.0%
TACATTCACAAGTATGGTGA+AGG + chr5_4:51192168-51192187 Msa0856490:CDS 35.0%
ACAAGTATGGTGAAGGAAAA+TGG + chr5_4:51192175-51192194 Msa0856490:CDS 35.0%
!! AGGAGTGCTTATATTCCAAA+CGG + chr5_4:51192494-51192513 Msa0856490:intron 35.0%
GTGCAATATTGCACATGTTA+AGG + chr5_4:51192762-51192781 Msa0856490:intron 35.0%
!!! ATTCTTTTTGGAGCAGCAAA+AGG + chr5_4:51193082-51193101 Msa0856490:intron 35.0%
GGTCATGTTTATATTATGGG+TGG - chr5_4:51193225-51193244 None:intergenic 35.0%
GGTGGGTCATGTTTATATTA+TGG - chr5_4:51193229-51193248 None:intergenic 35.0%
TGTAGTCAAAGAAAAAGGGT+GGG - chr5_4:51193246-51193265 None:intergenic 35.0%
ATGTAGTCAAAGAAAAAGGG+TGG - chr5_4:51193247-51193266 None:intergenic 35.0%
!!! TTTTCGCTGTTTTGTTTTCG+AGG - chr5_4:51193406-51193425 None:intergenic 35.0%
CAAAACAGCGAAAATCCAAA+AGG + chr5_4:51193412-51193431 Msa0856490:intron 35.0%
! CAAATTTTTCCTCCTCCTTT+TGG - chr5_4:51193430-51193449 None:intergenic 35.0%
TGCAATTGACAGGATTGAAT+AGG + chr5_4:51193643-51193662 Msa0856490:intron 35.0%
! ACCTCAATCTACAGCTTTTT+CGG - chr5_4:51193671-51193690 None:intergenic 35.0%
AAAAAGCTGTAGATTGAGGT+GGG + chr5_4:51193671-51193690 Msa0856490:CDS 35.0%
TGCTTTCTCTGTTGATATTG+GGG - chr5_4:51193710-51193729 None:intergenic 35.0%
GATCATATCAGCTTCATCTT+CGG - chr5_4:51193736-51193755 None:intergenic 35.0%
ATGAAGCTGATATGATCACA+AGG + chr5_4:51193739-51193758 Msa0856490:CDS 35.0%
ACATCATTAGCTGTTCTACT+AGG - chr5_4:51193920-51193939 None:intergenic 35.0%
ACTATTGGAATACACATCTG+CGG + chr5_4:51193945-51193964 Msa0856490:CDS 35.0%
AGAGAACAACTTTGATATGG+AGG + chr5_4:51194312-51194331 Msa0856490:CDS 35.0%
AATACCAGAGGTTTGAGAAA+AGG + chr5_4:51192108-51192127 Msa0856490:CDS 35.0%
AAGGCTTACATTCACAAGTA+TGG + chr5_4:51192162-51192181 Msa0856490:CDS 35.0%
TACATTCACAAGTATGGTGA+AGG + chr5_4:51192168-51192187 Msa0856490:CDS 35.0%
ACAAGTATGGTGAAGGAAAA+TGG + chr5_4:51192175-51192194 Msa0856490:CDS 35.0%
!! AGGAGTGCTTATATTCCAAA+CGG + chr5_4:51192494-51192513 Msa0856490:intron 35.0%
GTGCAATATTGCACATGTTA+AGG + chr5_4:51192762-51192781 Msa0856490:intron 35.0%
!!! ATTCTTTTTGGAGCAGCAAA+AGG + chr5_4:51193082-51193101 Msa0856490:intron 35.0%
GGTCATGTTTATATTATGGG+TGG - chr5_4:51193225-51193244 None:intergenic 35.0%
GGTGGGTCATGTTTATATTA+TGG - chr5_4:51193229-51193248 None:intergenic 35.0%
TGTAGTCAAAGAAAAAGGGT+GGG - chr5_4:51193246-51193265 None:intergenic 35.0%
ATGTAGTCAAAGAAAAAGGG+TGG - chr5_4:51193247-51193266 None:intergenic 35.0%
!!! TTTTCGCTGTTTTGTTTTCG+AGG - chr5_4:51193406-51193425 None:intergenic 35.0%
CAAAACAGCGAAAATCCAAA+AGG + chr5_4:51193412-51193431 Msa0856490:intron 35.0%
! CAAATTTTTCCTCCTCCTTT+TGG - chr5_4:51193430-51193449 None:intergenic 35.0%
TGCAATTGACAGGATTGAAT+AGG + chr5_4:51193643-51193662 Msa0856490:intron 35.0%
! ACCTCAATCTACAGCTTTTT+CGG - chr5_4:51193671-51193690 None:intergenic 35.0%
AAAAAGCTGTAGATTGAGGT+GGG + chr5_4:51193671-51193690 Msa0856490:CDS 35.0%
TGCTTTCTCTGTTGATATTG+GGG - chr5_4:51193710-51193729 None:intergenic 35.0%
GATCATATCAGCTTCATCTT+CGG - chr5_4:51193736-51193755 None:intergenic 35.0%
ATGAAGCTGATATGATCACA+AGG + chr5_4:51193739-51193758 Msa0856490:CDS 35.0%
ACATCATTAGCTGTTCTACT+AGG - chr5_4:51193920-51193939 None:intergenic 35.0%
ACTATTGGAATACACATCTG+CGG + chr5_4:51193945-51193964 Msa0856490:CDS 35.0%
AGAGAACAACTTTGATATGG+AGG + chr5_4:51194312-51194331 Msa0856490:CDS 35.0%
AAAAGGTCCATGGACATATG+AGG + chr5_4:51192125-51192144 Msa0856490:CDS 40.0%
TTGTCTTCCTCATATGTCCA+TGG - chr5_4:51192135-51192154 None:intergenic 40.0%
TGAGGAAGACAACTTACTCA+AGG + chr5_4:51192143-51192162 Msa0856490:CDS 40.0%
! TGTACGGTTCGATGTTGATT+TGG - chr5_4:51192545-51192564 None:intergenic 40.0%
ATGTACTCATAGAGAGTAGG+AGG - chr5_4:51193185-51193204 None:intergenic 40.0%
!! AGGGAAAATGAGGTTGGTAT+TGG - chr5_4:51193382-51193401 None:intergenic 40.0%
!! TTTTCGAGGAAGGGAAAATG+AGG - chr5_4:51193392-51193411 None:intergenic 40.0%
!!! GCTGTTTTGTTTTCGAGGAA+GGG - chr5_4:51193401-51193420 None:intergenic 40.0%
AACAGCGAAAATCCAAAAGG+AGG + chr5_4:51193415-51193434 Msa0856490:intron 40.0%
CTGTTTGGTATTAGTTGGCT+AGG - chr5_4:51193473-51193492 None:intergenic 40.0%
GAAAAAGCTGTAGATTGAGG+TGG + chr5_4:51193670-51193689 Msa0856490:CDS 40.0%
TACACAATCTCCTAGGGAAT+AGG + chr5_4:51193763-51193782 Msa0856490:CDS 40.0%
GTTGAAAGAGTTATAGGTCG+AGG - chr5_4:51194052-51194071 None:intergenic 40.0%
TGATGGCTCATCAGAGATTA+TGG + chr5_4:51194138-51194157 Msa0856490:CDS 40.0%
TCTGCTTCACAACTAAGTCT+AGG + chr5_4:51194190-51194209 Msa0856490:CDS 40.0%
AAAAGGTCCATGGACATATG+AGG + chr5_4:51192125-51192144 Msa0856490:CDS 40.0%
TTGTCTTCCTCATATGTCCA+TGG - chr5_4:51192135-51192154 None:intergenic 40.0%
TGAGGAAGACAACTTACTCA+AGG + chr5_4:51192143-51192162 Msa0856490:CDS 40.0%
! TGTACGGTTCGATGTTGATT+TGG - chr5_4:51192545-51192564 None:intergenic 40.0%
ATGTACTCATAGAGAGTAGG+AGG - chr5_4:51193185-51193204 None:intergenic 40.0%
!! AGGGAAAATGAGGTTGGTAT+TGG - chr5_4:51193382-51193401 None:intergenic 40.0%
!! TTTTCGAGGAAGGGAAAATG+AGG - chr5_4:51193392-51193411 None:intergenic 40.0%
!!! GCTGTTTTGTTTTCGAGGAA+GGG - chr5_4:51193401-51193420 None:intergenic 40.0%
AACAGCGAAAATCCAAAAGG+AGG + chr5_4:51193415-51193434 Msa0856490:intron 40.0%
CTGTTTGGTATTAGTTGGCT+AGG - chr5_4:51193473-51193492 None:intergenic 40.0%
GAAAAAGCTGTAGATTGAGG+TGG + chr5_4:51193670-51193689 Msa0856490:CDS 40.0%
TACACAATCTCCTAGGGAAT+AGG + chr5_4:51193763-51193782 Msa0856490:CDS 40.0%
GTTGAAAGAGTTATAGGTCG+AGG - chr5_4:51194052-51194071 None:intergenic 40.0%
TGATGGCTCATCAGAGATTA+TGG + chr5_4:51194138-51194157 Msa0856490:CDS 40.0%
TCTGCTTCACAACTAAGTCT+AGG + chr5_4:51194190-51194209 Msa0856490:CDS 40.0%
! TGGACCTTTTCTCAAACCTC+TGG - chr5_4:51192115-51192134 None:intergenic 45.0%
GAGGTTTGAGAAAAGGTCCA+TGG + chr5_4:51192115-51192134 Msa0856490:CDS 45.0%
TTGCGTATGAGCTTACCTCT+AGG - chr5_4:51192419-51192438 None:intergenic 45.0%
GGGCACCAGTTAAGAACTAA+AGG - chr5_4:51193031-51193050 None:intergenic 45.0%
!! CATAGAGAGTAGGAGGTGTT+AGG - chr5_4:51193178-51193197 None:intergenic 45.0%
!! TTGGCTTTGCATGCAGTTTG+TGG - chr5_4:51193363-51193382 None:intergenic 45.0%
!!! CGCTGTTTTGTTTTCGAGGA+AGG - chr5_4:51193402-51193421 None:intergenic 45.0%
AGCGAAAATCCAAAAGGAGG+AGG + chr5_4:51193418-51193437 Msa0856490:intron 45.0%
TGGTATTAGTTGGCTAGGTG+TGG - chr5_4:51193468-51193487 None:intergenic 45.0%
GCCGAAAAAGCTGTAGATTG+AGG + chr5_4:51193667-51193686 Msa0856490:CDS 45.0%
ACAAGGCTACACAATCTCCT+AGG + chr5_4:51193756-51193775 Msa0856490:CDS 45.0%
CAAGGCTACACAATCTCCTA+GGG + chr5_4:51193757-51193776 Msa0856490:CDS 45.0%
TGGAAGCTTACCTATTCCCT+AGG - chr5_4:51193776-51193795 None:intergenic 45.0%
AGGGAATAGGTAAGCTTCCA+AGG + chr5_4:51193776-51193795 Msa0856490:intron 45.0%
GGGAATAGGTAAGCTTCCAA+GGG + chr5_4:51193777-51193796 Msa0856490:intron 45.0%
! GATGGTCATTGATTGCTGCA+AGG + chr5_4:51193891-51193910 Msa0856490:intron 45.0%
GAATACACATCTGCGGAAGA+AGG + chr5_4:51193952-51193971 Msa0856490:CDS 45.0%
GAATGTGGTCGGACAGTTTA+TGG + chr5_4:51194233-51194252 Msa0856490:CDS 45.0%
GTCGGACAGTTTATGGAACT+TGG + chr5_4:51194240-51194259 Msa0856490:CDS 45.0%
! TGGACCTTTTCTCAAACCTC+TGG - chr5_4:51192115-51192134 None:intergenic 45.0%
GAGGTTTGAGAAAAGGTCCA+TGG + chr5_4:51192115-51192134 Msa0856490:CDS 45.0%
TTGCGTATGAGCTTACCTCT+AGG - chr5_4:51192419-51192438 None:intergenic 45.0%
GGGCACCAGTTAAGAACTAA+AGG - chr5_4:51193031-51193050 None:intergenic 45.0%
!! CATAGAGAGTAGGAGGTGTT+AGG - chr5_4:51193178-51193197 None:intergenic 45.0%
!! TTGGCTTTGCATGCAGTTTG+TGG - chr5_4:51193363-51193382 None:intergenic 45.0%
!!! CGCTGTTTTGTTTTCGAGGA+AGG - chr5_4:51193402-51193421 None:intergenic 45.0%
AGCGAAAATCCAAAAGGAGG+AGG + chr5_4:51193418-51193437 Msa0856490:intron 45.0%
TGGTATTAGTTGGCTAGGTG+TGG - chr5_4:51193468-51193487 None:intergenic 45.0%
GCCGAAAAAGCTGTAGATTG+AGG + chr5_4:51193667-51193686 Msa0856490:CDS 45.0%
ACAAGGCTACACAATCTCCT+AGG + chr5_4:51193756-51193775 Msa0856490:CDS 45.0%
CAAGGCTACACAATCTCCTA+GGG + chr5_4:51193757-51193776 Msa0856490:CDS 45.0%
TGGAAGCTTACCTATTCCCT+AGG - chr5_4:51193776-51193795 None:intergenic 45.0%
AGGGAATAGGTAAGCTTCCA+AGG + chr5_4:51193776-51193795 Msa0856490:intron 45.0%
GGGAATAGGTAAGCTTCCAA+GGG + chr5_4:51193777-51193796 Msa0856490:intron 45.0%
! GATGGTCATTGATTGCTGCA+AGG + chr5_4:51193891-51193910 Msa0856490:intron 45.0%
GAATACACATCTGCGGAAGA+AGG + chr5_4:51193952-51193971 Msa0856490:CDS 45.0%
GAATGTGGTCGGACAGTTTA+TGG + chr5_4:51194233-51194252 Msa0856490:CDS 45.0%
GTCGGACAGTTTATGGAACT+TGG + chr5_4:51194240-51194259 Msa0856490:CDS 45.0%
!! AAAAAAAAAAAAAAAAACAT+TGG - chr5_4:51192448-51192467 None:intergenic 5.0%
!!! AATACTATATATTTTTATAT+GGG - chr5_4:51192929-51192948 None:intergenic 5.0%
!! AAAAAAAAAAAAAAAAACAT+TGG - chr5_4:51192448-51192467 None:intergenic 5.0%
!!! AATACTATATATTTTTATAT+GGG - chr5_4:51192929-51192948 None:intergenic 5.0%
!! GAGTAGGAGGTGTTAGGTTG+TGG - chr5_4:51193172-51193191 None:intergenic 50.0%
CGAGGAAGGGAAAATGAGGT+TGG - chr5_4:51193388-51193407 None:intergenic 50.0%
TAGGCTACATGCATTGCCCT+TGG - chr5_4:51193796-51193815 None:intergenic 50.0%
GGTAATGTTCCCGTACCATG+TGG + chr5_4:51194211-51194230 Msa0856490:CDS 50.0%
TTCCCGTACCATGTGGAATG+TGG + chr5_4:51194218-51194237 Msa0856490:CDS 50.0%
GACCACATTCCACATGGTAC+GGG - chr5_4:51194223-51194242 None:intergenic 50.0%
CGACCACATTCCACATGGTA+CGG - chr5_4:51194224-51194243 None:intergenic 50.0%
CGTACCATGTGGAATGTGGT+CGG + chr5_4:51194222-51194241 Msa0856490:CDS 50.0%
!! GAGTAGGAGGTGTTAGGTTG+TGG - chr5_4:51193172-51193191 None:intergenic 50.0%
CGAGGAAGGGAAAATGAGGT+TGG - chr5_4:51193388-51193407 None:intergenic 50.0%
TAGGCTACATGCATTGCCCT+TGG - chr5_4:51193796-51193815 None:intergenic 50.0%
GGTAATGTTCCCGTACCATG+TGG + chr5_4:51194211-51194230 Msa0856490:CDS 50.0%
TTCCCGTACCATGTGGAATG+TGG + chr5_4:51194218-51194237 Msa0856490:CDS 50.0%
GACCACATTCCACATGGTAC+GGG - chr5_4:51194223-51194242 None:intergenic 50.0%
CGACCACATTCCACATGGTA+CGG - chr5_4:51194224-51194243 None:intergenic 50.0%
CGTACCATGTGGAATGTGGT+CGG + chr5_4:51194222-51194241 Msa0856490:CDS 50.0%
CTGTCCGACCACATTCCACA+TGG - chr5_4:51194229-51194248 None:intergenic 55.0%
CTGTCCGACCACATTCCACA+TGG - chr5_4:51194229-51194248 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 51192102 51194402 51192102 ID=Msa0856490;Name=Msa0856490
chr5_4 mRNA 51192102 51194402 51192102 ID=Msa0856490-mRNA-1;Parent=Msa0856490;Name=Msa0856490-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|3|0|252
chr5_4 exon 51192102 51192219 51192102 ID=Msa0856490-mRNA-1:exon:15996;Parent=Msa0856490-mRNA-1
chr5_4 exon 51193655 51193784 51193655 ID=Msa0856490-mRNA-1:exon:15997;Parent=Msa0856490-mRNA-1
chr5_4 exon 51193892 51194402 51193892 ID=Msa0856490-mRNA-1:exon:15998;Parent=Msa0856490-mRNA-1
chr5_4 CDS 51192102 51192219 51192102 ID=Msa0856490-mRNA-1:cds;Parent=Msa0856490-mRNA-1
chr5_4 CDS 51193655 51193784 51193655 ID=Msa0856490-mRNA-1:cds;Parent=Msa0856490-mRNA-1
chr5_4 CDS 51193892 51194402 51193892 ID=Msa0856490-mRNA-1:cds;Parent=Msa0856490-mRNA-1
Gene Sequence

>Msa0856490

ATGGAGAATACCAGAGGTTTGAGAAAAGGTCCATGGACATATGAGGAAGACAACTTACTCAAGGCTTACATTCACAAGTATGGTGAAGGAAAATGGCATTTAATTCCCAAAAGAACAGGATTGAATAGGTGCCGAAAAAGCTGTAGATTGAGGTGGGTAAATTATTTAAACCCCAATATCAACAGAGAAAGCATTACCGAAGATGAAGCTGATATGATCACAAGGCTACACAATCTCCTAGGGAATAGATGGTCATTGATTGCTGCAAGGCTTCCTAGTAGAACAGCTAATGATGTGAAAAACTATTGGAATACACATCTGCGGAAGAAGGTTCTTTCAGCATCATTAGAAAAAAATGAAAAAGAGAGATCTAAGGAAACAATGAAAGCTCATGAAGTTATTAAACCTCGACCTATAACTCTTTCAACTTCTTCATCTTTCATGACACAACCAATATTGAATTTAAATAAAGATAGTAAAATTATCATGGATCGTGATGGCTCATCAGAGATTATGGTTCCAAATCAAATTGGTAGAGATTGTGCTTCTGCTTCACAACTAAGTCTAGGTAATGTTCCCGTACCATGTGGAATGTGGTCGGACAGTTTATGGAACTTGGAAGAACAAGTAAACAGTGACAAAATTGGCTCATGCTCTTCACTACAAGAAGAGAACAACTTTGATATGGAGGTTCCAAATGTTGATGACTTCTTTTGGGATTTCAAGCTTGATGATTTTGATTTTCTTATGAATCTTTAA
Protein sequence

>Msa0856490

MENTRGLRKGPWTYEEDNLLKAYIHKYGEGKWHLIPKRTGLNRCRKSCRLRWVNYLNPNINRESITEDEADMITRLHNLLGNRWSLIAARLPSRTANDVKNYWNTHLRKKVLSASLEKNEKERSKETMKAHEVIKPRPITLSTSSSFMTQPILNLNKDSKIIMDRDGSSEIMVPNQIGRDCASASQLSLGNVPVPCGMWSDSLWNLEEQVNSDKIGSCSSLQEENNFDMEVPNVDDFFWDFKLDDFDFLMNL*