Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0856820 | XP_003598029.2 | 44.397 | 232 | 87 | 5 | 13 | 202 | 277 | 508 | 2.95e-44 | 171 |
| Msa0856820 | XP_003598029.2 | 55.491 | 173 | 54 | 2 | 202 | 374 | 14 | 163 | 2.01e-49 | 185 |
| Msa0856820 | XP_003598029.2 | 66.158 | 393 | 107 | 5 | 13 | 381 | 40 | 430 | 5.44e-170 | 496 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0856820 | sp|Q8L3W1|VRN1_ARATH | 40.000 | 100 | 60 | 0 | 214 | 313 | 6 | 105 | 1.90e-17 | 86.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0856820 | G7IYE8 | 44.397 | 232 | 87 | 5 | 13 | 202 | 277 | 508 | 1.41e-44 | 171 |
| Msa0856820 | G7IYE8 | 55.491 | 173 | 54 | 2 | 202 | 374 | 14 | 163 | 9.61e-50 | 185 |
| Msa0856820 | G7IYE8 | 66.158 | 393 | 107 | 5 | 13 | 381 | 40 | 430 | 2.60e-170 | 496 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0856820 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0856820 | MtrunA17_Chr3g0077411 | 66.158 | 393 | 107 | 5 | 13 | 381 | 40 | 430 | 5.00e-174 | 496 |
| Msa0856820 | MtrunA17_Chr3g0077411 | 55.491 | 173 | 54 | 2 | 202 | 374 | 14 | 163 | 1.85e-53 | 185 |
| Msa0856820 | MtrunA17_Chr3g0077411 | 44.397 | 232 | 87 | 5 | 13 | 202 | 277 | 508 | 2.72e-48 | 171 |
| Msa0856820 | MtrunA17_Chr3g0077461 | 62.466 | 365 | 105 | 4 | 2 | 343 | 11 | 366 | 2.98e-151 | 436 |
| Msa0856820 | MtrunA17_Chr3g0077461 | 45.238 | 210 | 89 | 8 | 13 | 200 | 252 | 457 | 8.12e-42 | 153 |
| Msa0856820 | MtrunA17_Chr4g0009491 | 60.104 | 386 | 140 | 2 | 9 | 381 | 8 | 392 | 1.27e-149 | 430 |
| Msa0856820 | MtrunA17_Chr4g0009491 | 47.312 | 186 | 64 | 3 | 13 | 164 | 240 | 425 | 1.22e-38 | 144 |
| Msa0856820 | MtrunA17_Chr3g0077361 | 54.839 | 403 | 112 | 4 | 13 | 381 | 55 | 421 | 3.60e-131 | 386 |
| Msa0856820 | MtrunA17_Chr3g0077361 | 53.005 | 183 | 60 | 4 | 200 | 381 | 29 | 186 | 2.13e-48 | 171 |
| Msa0856820 | MtrunA17_Chr3g0077361 | 40.394 | 203 | 94 | 3 | 13 | 202 | 304 | 492 | 2.20e-32 | 127 |
| Msa0856820 | MtrunA17_Chr3g0077381 | 53.041 | 411 | 136 | 4 | 10 | 386 | 32 | 419 | 1.17e-130 | 382 |
| Msa0856820 | MtrunA17_Chr3g0077381 | 46.237 | 186 | 59 | 4 | 13 | 164 | 262 | 440 | 2.09e-36 | 138 |
| Msa0856820 | MtrunA17_Chr5g0429931 | 70.064 | 157 | 47 | 0 | 224 | 380 | 5 | 161 | 2.39e-70 | 221 |
| Msa0856820 | MtrunA17_Chr5g0429931 | 50.442 | 226 | 78 | 3 | 11 | 202 | 8 | 233 | 1.66e-64 | 206 |
| Msa0856820 | MtrunA17_Chr3g0077451 | 65.584 | 154 | 43 | 1 | 228 | 381 | 10 | 153 | 3.92e-64 | 205 |
| Msa0856820 | MtrunA17_Chr3g0077451 | 50.226 | 221 | 85 | 3 | 11 | 206 | 9 | 229 | 5.29e-59 | 192 |
| Msa0856820 | MtrunA17_Chr3g0077431 | 53.158 | 190 | 77 | 2 | 29 | 206 | 1 | 190 | 1.36e-55 | 182 |
| Msa0856820 | MtrunA17_Chr3g0077431 | 63.710 | 124 | 35 | 1 | 258 | 381 | 1 | 114 | 7.14e-47 | 159 |
| Msa0856820 | MtrunA17_Chr3g0077421 | 50.785 | 191 | 81 | 2 | 29 | 206 | 1 | 191 | 2.50e-51 | 171 |
| Msa0856820 | MtrunA17_Chr3g0077421 | 64.516 | 124 | 34 | 1 | 258 | 381 | 1 | 114 | 6.23e-46 | 157 |
| Msa0856820 | MtrunA17_Chr3g0077441 | 50.785 | 191 | 81 | 2 | 29 | 206 | 1 | 191 | 2.50e-51 | 171 |
| Msa0856820 | MtrunA17_Chr3g0077441 | 64.516 | 124 | 34 | 1 | 258 | 381 | 1 | 114 | 6.23e-46 | 157 |
| Msa0856820 | MtrunA17_Chr1g0162441 | 44.000 | 100 | 56 | 0 | 214 | 313 | 7 | 106 | 6.18e-25 | 105 |
| Msa0856820 | MtrunA17_Chr4g0033961 | 41.748 | 103 | 60 | 0 | 211 | 313 | 3 | 105 | 1.50e-21 | 95.9 |
| Msa0856820 | MtrunA17_Chr1g0162411 | 42.222 | 90 | 52 | 0 | 214 | 303 | 7 | 96 | 4.00e-19 | 89.0 |
| Msa0856820 | MtrunA17_Chr7g0233571 | 30.435 | 138 | 96 | 0 | 213 | 350 | 9 | 146 | 2.67e-15 | 74.7 |
| Msa0856820 | MtrunA17_Chr7g0233561 | 31.724 | 145 | 88 | 3 | 207 | 340 | 9 | 153 | 3.04e-15 | 76.3 |
| Msa0856820 | MtrunA17_Chr5g0419201 | 32.432 | 111 | 75 | 0 | 202 | 312 | 4 | 114 | 3.42e-15 | 73.6 |
| Msa0856820 | MtrunA17_Chr3g0131891 | 28.743 | 167 | 105 | 2 | 195 | 352 | 5 | 166 | 7.56e-15 | 75.1 |
| Msa0856820 | MtrunA17_Chr3g0103181 | 31.250 | 144 | 96 | 2 | 213 | 356 | 11 | 151 | 2.62e-13 | 69.7 |
| Msa0856820 | MtrunA17_Chr3g0103151 | 29.861 | 144 | 98 | 2 | 213 | 356 | 11 | 151 | 3.27e-13 | 67.0 |
| Msa0856820 | MtrunA17_Chr7g0233521 | 30.220 | 182 | 99 | 6 | 230 | 384 | 2 | 182 | 3.47e-13 | 69.3 |
| Msa0856820 | MtrunA17_Chr3g0103171 | 35.714 | 84 | 54 | 0 | 229 | 312 | 5 | 88 | 4.95e-12 | 65.9 |
| Msa0856820 | MtrunA17_Chr3g0103191 | 27.568 | 185 | 103 | 4 | 214 | 371 | 12 | 192 | 7.24e-12 | 65.1 |
| Msa0856820 | MtrunA17_Chr1g0162421 | 41.071 | 56 | 33 | 0 | 228 | 283 | 7 | 62 | 8.64e-12 | 60.1 |
| Msa0856820 | MtrunA17_Chr7g0233541 | 29.730 | 111 | 72 | 1 | 230 | 334 | 2 | 112 | 4.12e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0856820 | AT3G18990.1 | 40.000 | 100 | 60 | 0 | 214 | 313 | 6 | 105 | 1.93e-18 | 86.3 |
| Msa0856820 | AT3G18990.2 | 39.423 | 104 | 63 | 0 | 214 | 317 | 6 | 109 | 2.93e-18 | 85.9 |
| Msa0856820 | AT4G01580.1 | 35.849 | 106 | 68 | 0 | 212 | 317 | 28 | 133 | 2.97e-16 | 77.0 |
| Msa0856820 | AT3G18960.2 | 35.644 | 101 | 65 | 0 | 212 | 312 | 28 | 128 | 2.19e-15 | 74.7 |
| Msa0856820 | AT3G18960.1 | 35.644 | 101 | 65 | 0 | 212 | 312 | 28 | 128 | 2.25e-15 | 75.1 |
| Msa0856820 | AT1G49475.1 | 35.965 | 114 | 69 | 2 | 199 | 312 | 22 | 131 | 2.79e-13 | 68.6 |
| Msa0856820 | AT3G18960.3 | 34.524 | 84 | 55 | 0 | 229 | 312 | 8 | 91 | 1.93e-11 | 62.8 |
Find 76 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGACTTTATAACAATATT+TGG | 0.103105 | 5_4:+51810929 | Msa0856820:CDS |
| ACTGCTTTCCTTGAGAATTT+TGG | 0.150373 | 5_4:-51809994 | None:intergenic |
| GAGCACTTTGAACGAAAATA+AGG | 0.215729 | 5_4:-51811340 | None:intergenic |
| GGATGGTCTAATTTGGAAAA+TGG | 0.229629 | 5_4:+51810988 | Msa0856820:CDS |
| CTGTTCCGGATGGTCTAATT+TGG | 0.238913 | 5_4:+51810981 | Msa0856820:CDS |
| GATGAGTTTATAACAAGATT+TGG | 0.242784 | 5_4:+51809495 | Msa0856820:CDS |
| AACAAGATTTGGGAAAGATT+TGG | 0.264591 | 5_4:+51809506 | Msa0856820:CDS |
| ATTTCCTATCTATTCAAAAC+TGG | 0.268008 | 5_4:+51809690 | Msa0856820:CDS |
| ACAAGATTTGGGAAAGATTT+GGG | 0.278385 | 5_4:+51809507 | Msa0856820:CDS |
| TATGGCCTTCTTAAAATGTT+TGG | 0.280661 | 5_4:-51810765 | None:intergenic |
| AATATTGTTATAAAGTCTTC+TGG | 0.286515 | 5_4:-51810926 | None:intergenic |
| CTGTAGTGACCAATCTTTAG+AGG | 0.292480 | 5_4:-51809463 | None:intergenic |
| GGACTATGACACTCTTTGTT+TGG | 0.315553 | 5_4:-51811202 | None:intergenic |
| AAGTGAGAGTCAAGAGAAAA+AGG | 0.347170 | 5_4:+51811249 | Msa0856820:CDS |
| ATGAGTTTATAACAAGATTT+GGG | 0.351444 | 5_4:+51809496 | Msa0856820:CDS |
| GGTGAAATTTACAATTTGTT+TGG | 0.353537 | 5_4:-51810807 | None:intergenic |
| TACAATTTGTTTGGCATGAA+TGG | 0.360092 | 5_4:-51810798 | None:intergenic |
| AAGACTTTATAACAATATTT+GGG | 0.361172 | 5_4:+51810930 | Msa0856820:CDS |
| TTCAAAACTGGGAAGACTAA+TGG | 0.372140 | 5_4:+51809702 | Msa0856820:CDS |
| AAATCAATGCGAATAACGTT+TGG | 0.379436 | 5_4:+51810052 | Msa0856820:CDS |
| TGGGAAAGATTTGGGAATGA+TGG | 0.387692 | 5_4:+51809515 | Msa0856820:CDS |
| TGGAGCTTGAACAGAACATT+TGG | 0.389188 | 5_4:-51809974 | None:intergenic |
| TTGGAAGAACGCGTTGTGTT+TGG | 0.403247 | 5_4:-51809729 | None:intergenic |
| CCTCACCACATATCTTCCTT+TGG | 0.412092 | 5_4:-51811362 | None:intergenic |
| AATCTTGTTATAAACTCATC+TGG | 0.413404 | 5_4:-51809492 | None:intergenic |
| TGCAGGCGGAGAAGGAAGTT+AGG | 0.415021 | 5_4:+51810738 | Msa0856820:intron |
| ACTCTCACTTGTTTCGACCT+TGG | 0.417847 | 5_4:-51811236 | None:intergenic |
| ATGAATGGGTGACGGAAGTA+TGG | 0.419901 | 5_4:-51810783 | None:intergenic |
| TACTTGTCTTTCAAATATGA+AGG | 0.427472 | 5_4:+51811094 | Msa0856820:CDS |
| GAACACTACTCTATCTGTTA+TGG | 0.428310 | 5_4:+51809594 | Msa0856820:CDS |
| TCTGTAGATTTCAAGTATGA+AGG | 0.428768 | 5_4:+51809621 | Msa0856820:CDS |
| TGTTGCTACAGTTACTGTTC+CGG | 0.431782 | 5_4:+51810967 | Msa0856820:CDS |
| TTCAAAACTCTAAGTACTAA+AGG | 0.437207 | 5_4:+51811175 | Msa0856820:CDS |
| TGTCTAAATATGCTTCTAAG+AGG | 0.458130 | 5_4:+51811281 | Msa0856820:CDS |
| TACTTTGCAGCGAATTCAGC+AGG | 0.458261 | 5_4:-51809944 | None:intergenic |
| AGCACTTTGAACGAAAATAA+GGG | 0.459706 | 5_4:-51811339 | None:intergenic |
| ATCACCCTTCCTCTAAAGAT+TGG | 0.475124 | 5_4:+51809454 | Msa0856820:CDS |
| ACAAAGAGTGTCATAGTCCT+AGG | 0.483569 | 5_4:+51811206 | Msa0856820:CDS |
| TATTGAATTGCAGGCGGAGA+AGG | 0.498005 | 5_4:+51810730 | Msa0856820:intron |
| ATATCGACAGTCAAAGGATT+GGG | 0.499850 | 5_4:-51809817 | None:intergenic |
| ACAATTTGTTTGGCATGAAT+GGG | 0.501644 | 5_4:-51810797 | None:intergenic |
| TTGGATTCTTTAGATTTGCA+AGG | 0.513403 | 5_4:+51810071 | Msa0856820:CDS |
| AGTGTCATAGTCCTAGGAAA+AGG | 0.516090 | 5_4:+51811212 | Msa0856820:CDS |
| CATATCGACAGTCAAAGGAT+TGG | 0.519552 | 5_4:-51809818 | None:intergenic |
| AAGGATTGGGAACGAAAAGA+AGG | 0.522583 | 5_4:-51809804 | None:intergenic |
| GCAGGCGGAGAAGGAAGTTA+GGG | 0.528822 | 5_4:+51810739 | Msa0856820:intron |
| ACTTGTCTTTCAAATATGAA+GGG | 0.536470 | 5_4:+51811095 | Msa0856820:CDS |
| CACCGCATATCGACAGTCAA+AGG | 0.544452 | 5_4:-51809823 | None:intergenic |
| AGGGAAAACAATCTATCAGA+TGG | 0.548736 | 5_4:+51810091 | Msa0856820:CDS |
| TTTCGTTCAAAGTGCTCCAA+AGG | 0.552472 | 5_4:+51811346 | Msa0856820:CDS |
| TTCAAGCTCCAAAATTCTCA+AGG | 0.552648 | 5_4:+51809986 | Msa0856820:CDS |
| AGAACAAAGGATGCTGCCAA+TGG | 0.556963 | 5_4:+51809765 | Msa0856820:CDS |
| TTTCCTATCTATTCAAAACT+GGG | 0.559847 | 5_4:+51809691 | Msa0856820:CDS |
| TGGATTCTTTAGATTTGCAA+GGG | 0.565236 | 5_4:+51810072 | Msa0856820:CDS |
| AGTGACCAATCTTTAGAGGA+AGG | 0.568653 | 5_4:-51809459 | None:intergenic |
| ATATGCTTCTAAGAGGGCTG+AGG | 0.576389 | 5_4:+51811288 | Msa0856820:CDS |
| TATTGTGTATTGAATAAAAG+CGG | 0.577376 | 5_4:+51810025 | Msa0856820:CDS |
| TGTGTATTGAATAAAAGCGG+TGG | 0.597510 | 5_4:+51810028 | Msa0856820:CDS |
| AAAATTCTCAAGGAAAGCAG+TGG | 0.599450 | 5_4:+51809996 | Msa0856820:CDS |
| ATAGAGTAGTGTTCTGCGAA+CGG | 0.599484 | 5_4:-51809585 | None:intergenic |
| AAAATGGAGTTGAAGATATG+TGG | 0.601427 | 5_4:+51811004 | Msa0856820:CDS |
| AGGATTGGGAACGAAAAGAA+GGG | 0.605751 | 5_4:-51809803 | None:intergenic |
| GTGACCAATCTTTAGAGGAA+GGG | 0.612342 | 5_4:-51809458 | None:intergenic |
| GTCTAAATATGCTTCTAAGA+GGG | 0.612421 | 5_4:+51811282 | Msa0856820:CDS |
| GTGCTCCAAAGGAAGATATG+TGG | 0.623189 | 5_4:+51811357 | Msa0856820:CDS |
| ATCCTTTGACTGTCGATATG+CGG | 0.632326 | 5_4:+51809821 | Msa0856820:CDS |
| GCTACAGTTACTGTTCCGGA+TGG | 0.632577 | 5_4:+51810971 | Msa0856820:CDS |
| AAATTCTCAAGGAAAGCAGT+GGG | 0.637805 | 5_4:+51809997 | Msa0856820:CDS |
| TAGTCCTAGGAAAAGGTCCA+AGG | 0.641569 | 5_4:+51811219 | Msa0856820:CDS |
| GGAGTTGAAGATATGTGGCA+AGG | 0.642891 | 5_4:+51811009 | Msa0856820:CDS |
| CTTTGCTCCGAAAAGAACAA+AGG | 0.651496 | 5_4:+51809752 | Msa0856820:CDS |
| ACGAGTTTGAGCTTATCAAG+AGG | 0.654788 | 5_4:+51810122 | Msa0856820:CDS |
| CCAAAGGAAGATATGTGGTG+AGG | 0.663159 | 5_4:+51811362 | Msa0856820:CDS |
| TGTTTGGCATGAATGGGTGA+CGG | 0.666868 | 5_4:-51810791 | None:intergenic |
| ATGATGGAAGTAAAGAAACG+TGG | 0.750133 | 5_4:+51809531 | Msa0856820:CDS |
| AATCACGATAGTCAACCACG+CGG | 0.904290 | 5_4:-51811408 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTTACTATACATTATT+TGG | + | chr5_4:51809847-51809866 | Msa0856820:intron | 15.0% |
| !!! | ATGTTTGAGTTATATATTTA+TGG | + | chr5_4:51809881-51809900 | Msa0856820:intron | 15.0% |
| !! | AAGACTTTATAACAATATTT+GGG | + | chr5_4:51810930-51810949 | Msa0856820:CDS | 15.0% |
| !!! | TTTTCAAAATACTATTCTAT+AGG | + | chr5_4:51811061-51811080 | Msa0856820:CDS | 15.0% |
| !!! | TGATTTTACTATACATTATT+TGG | + | chr5_4:51809847-51809866 | Msa0856820:intron | 15.0% |
| !!! | ATGTTTGAGTTATATATTTA+TGG | + | chr5_4:51809881-51809900 | Msa0856820:intron | 15.0% |
| !! | AAGACTTTATAACAATATTT+GGG | + | chr5_4:51810930-51810949 | Msa0856820:CDS | 15.0% |
| !!! | TTTTCAAAATACTATTCTAT+AGG | + | chr5_4:51811061-51811080 | Msa0856820:CDS | 15.0% |
| !! | ATGAGTTTATAACAAGATTT+GGG | + | chr5_4:51809496-51809515 | Msa0856820:CDS | 20.0% |
| !!! | AAGTTTTCTTTTGCAAAAAT+TGG | + | chr5_4:51809559-51809578 | Msa0856820:CDS | 20.0% |
| !! | TATTGTGTATTGAATAAAAG+CGG | + | chr5_4:51810025-51810044 | Msa0856820:CDS | 20.0% |
| !! | TGTTGTATTGTAATTCATAT+AGG | + | chr5_4:51810256-51810275 | Msa0856820:intron | 20.0% |
| !!! | ATTGATGATAGCAATAAAAA+GGG | - | chr5_4:51810494-51810513 | None:intergenic | 20.0% |
| !!! | TCTTTGTTTATAATGTGAAT+CGG | + | chr5_4:51810672-51810691 | Msa0856820:intron | 20.0% |
| !!! | TTGATGATAATATAACTCAT+CGG | - | chr5_4:51810876-51810895 | None:intergenic | 20.0% |
| !! | AATATTGTTATAAAGTCTTC+TGG | - | chr5_4:51810929-51810948 | None:intergenic | 20.0% |
| !! | GAAGACTTTATAACAATATT+TGG | + | chr5_4:51810929-51810948 | Msa0856820:CDS | 20.0% |
| !!! | TAGAATAGTATTTTGAAAAC+TGG | - | chr5_4:51811060-51811079 | None:intergenic | 20.0% |
| !! | ATGAGTTTATAACAAGATTT+GGG | + | chr5_4:51809496-51809515 | Msa0856820:CDS | 20.0% |
| !!! | AAGTTTTCTTTTGCAAAAAT+TGG | + | chr5_4:51809559-51809578 | Msa0856820:CDS | 20.0% |
| !! | TATTGTGTATTGAATAAAAG+CGG | + | chr5_4:51810025-51810044 | Msa0856820:CDS | 20.0% |
| !! | TGTTGTATTGTAATTCATAT+AGG | + | chr5_4:51810256-51810275 | Msa0856820:intron | 20.0% |
| !!! | ATTGATGATAGCAATAAAAA+GGG | - | chr5_4:51810494-51810513 | None:intergenic | 20.0% |
| !!! | TCTTTGTTTATAATGTGAAT+CGG | + | chr5_4:51810672-51810691 | Msa0856820:intron | 20.0% |
| !!! | TTGATGATAATATAACTCAT+CGG | - | chr5_4:51810876-51810895 | None:intergenic | 20.0% |
| !! | AATATTGTTATAAAGTCTTC+TGG | - | chr5_4:51810929-51810948 | None:intergenic | 20.0% |
| !! | GAAGACTTTATAACAATATT+TGG | + | chr5_4:51810929-51810948 | Msa0856820:CDS | 20.0% |
| !!! | TAGAATAGTATTTTGAAAAC+TGG | - | chr5_4:51811060-51811079 | None:intergenic | 20.0% |
| !! | AATCTTGTTATAAACTCATC+TGG | - | chr5_4:51809495-51809514 | None:intergenic | 25.0% |
| ! | GATGAGTTTATAACAAGATT+TGG | + | chr5_4:51809495-51809514 | Msa0856820:CDS | 25.0% |
| ! | ATTTCCTATCTATTCAAAAC+TGG | + | chr5_4:51809690-51809709 | Msa0856820:CDS | 25.0% |
| ! | TTTCCTATCTATTCAAAACT+GGG | + | chr5_4:51809691-51809710 | Msa0856820:CDS | 25.0% |
| !!! | ATTCATATAGGTAGTTTTGT+TGG | + | chr5_4:51810268-51810287 | Msa0856820:intron | 25.0% |
| !!! | TTACCCTATTTTTACATAAG+AGG | - | chr5_4:51810393-51810412 | None:intergenic | 25.0% |
| ! | TCTTATGTAAAAATAGGGTA+AGG | + | chr5_4:51810392-51810411 | Msa0856820:intron | 25.0% |
| !! | CATTGATGATAGCAATAAAA+AGG | - | chr5_4:51810495-51810514 | None:intergenic | 25.0% |
| ! | GATAATGAGAAAGAATGATT+AGG | - | chr5_4:51810566-51810585 | None:intergenic | 25.0% |
| ! | CTTATTACTTATTGAATTGC+AGG | + | chr5_4:51810721-51810740 | Msa0856820:intron | 25.0% |
| !! | GGTGAAATTTACAATTTGTT+TGG | - | chr5_4:51810810-51810829 | None:intergenic | 25.0% |
| ! | TACTTGTCTTTCAAATATGA+AGG | + | chr5_4:51811094-51811113 | Msa0856820:CDS | 25.0% |
| ! | ACTTGTCTTTCAAATATGAA+GGG | + | chr5_4:51811095-51811114 | Msa0856820:CDS | 25.0% |
| ! | TTCAAAACTCTAAGTACTAA+AGG | + | chr5_4:51811175-51811194 | Msa0856820:CDS | 25.0% |
| !!! | AACGAAAATAAGGGTTTTTT+GGG | - | chr5_4:51811333-51811352 | None:intergenic | 25.0% |
| !! | GGATTTTACTTTGTAGTTTT+TGG | + | chr5_4:51811383-51811402 | Msa0856820:CDS | 25.0% |
| !! | AATCTTGTTATAAACTCATC+TGG | - | chr5_4:51809495-51809514 | None:intergenic | 25.0% |
| ! | GATGAGTTTATAACAAGATT+TGG | + | chr5_4:51809495-51809514 | Msa0856820:CDS | 25.0% |
| ! | ATTTCCTATCTATTCAAAAC+TGG | + | chr5_4:51809690-51809709 | Msa0856820:CDS | 25.0% |
| ! | TTTCCTATCTATTCAAAACT+GGG | + | chr5_4:51809691-51809710 | Msa0856820:CDS | 25.0% |
| !!! | ATTCATATAGGTAGTTTTGT+TGG | + | chr5_4:51810268-51810287 | Msa0856820:intron | 25.0% |
| !!! | TTACCCTATTTTTACATAAG+AGG | - | chr5_4:51810393-51810412 | None:intergenic | 25.0% |
| ! | TCTTATGTAAAAATAGGGTA+AGG | + | chr5_4:51810392-51810411 | Msa0856820:intron | 25.0% |
| !! | CATTGATGATAGCAATAAAA+AGG | - | chr5_4:51810495-51810514 | None:intergenic | 25.0% |
| ! | GATAATGAGAAAGAATGATT+AGG | - | chr5_4:51810566-51810585 | None:intergenic | 25.0% |
| ! | CTTATTACTTATTGAATTGC+AGG | + | chr5_4:51810721-51810740 | Msa0856820:intron | 25.0% |
| !! | GGTGAAATTTACAATTTGTT+TGG | - | chr5_4:51810810-51810829 | None:intergenic | 25.0% |
| ! | TACTTGTCTTTCAAATATGA+AGG | + | chr5_4:51811094-51811113 | Msa0856820:CDS | 25.0% |
| ! | ACTTGTCTTTCAAATATGAA+GGG | + | chr5_4:51811095-51811114 | Msa0856820:CDS | 25.0% |
| ! | TTCAAAACTCTAAGTACTAA+AGG | + | chr5_4:51811175-51811194 | Msa0856820:CDS | 25.0% |
| !!! | AACGAAAATAAGGGTTTTTT+GGG | - | chr5_4:51811333-51811352 | None:intergenic | 25.0% |
| !! | GGATTTTACTTTGTAGTTTT+TGG | + | chr5_4:51811383-51811402 | Msa0856820:CDS | 25.0% |
| AACAAGATTTGGGAAAGATT+TGG | + | chr5_4:51809506-51809525 | Msa0856820:CDS | 30.0% | |
| ACAAGATTTGGGAAAGATTT+GGG | + | chr5_4:51809507-51809526 | Msa0856820:CDS | 30.0% | |
| ! | TCTGTAGATTTCAAGTATGA+AGG | + | chr5_4:51809621-51809640 | Msa0856820:CDS | 30.0% |
| !!! | AACGAAAAGAAGGGTTTTTT+GGG | - | chr5_4:51809797-51809816 | None:intergenic | 30.0% |
| AAATCAATGCGAATAACGTT+TGG | + | chr5_4:51810052-51810071 | Msa0856820:CDS | 30.0% | |
| TTGGATTCTTTAGATTTGCA+AGG | + | chr5_4:51810071-51810090 | Msa0856820:CDS | 30.0% | |
| TGGATTCTTTAGATTTGCAA+GGG | + | chr5_4:51810072-51810091 | Msa0856820:CDS | 30.0% | |
| ACAGCCTCTTATGTAAAAAT+AGG | + | chr5_4:51810386-51810405 | Msa0856820:intron | 30.0% | |
| CAGCCTCTTATGTAAAAATA+GGG | + | chr5_4:51810387-51810406 | Msa0856820:intron | 30.0% | |
| AAGAATAATGAACTCGTATG+TGG | - | chr5_4:51810656-51810675 | None:intergenic | 30.0% | |
| ATTACTTATTGAATTGCAGG+CGG | + | chr5_4:51810724-51810743 | Msa0856820:intron | 30.0% | |
| !! | GGAATCCAAACATTTTAAGA+AGG | + | chr5_4:51810760-51810779 | Msa0856820:CDS | 30.0% |
| TATGGCCTTCTTAAAATGTT+TGG | - | chr5_4:51810768-51810787 | None:intergenic | 30.0% | |
| ! | ACAATTTGTTTGGCATGAAT+GGG | - | chr5_4:51810800-51810819 | None:intergenic | 30.0% |
| ! | TACAATTTGTTTGGCATGAA+TGG | - | chr5_4:51810801-51810820 | None:intergenic | 30.0% |
| !! | TAACTCATCGGTTCTAATAT+AGG | - | chr5_4:51810864-51810883 | None:intergenic | 30.0% |
| ! | ATTTTCCAAATTAGACCATC+CGG | - | chr5_4:51810989-51811008 | None:intergenic | 30.0% |
| AAAATGGAGTTGAAGATATG+TGG | + | chr5_4:51811004-51811023 | Msa0856820:CDS | 30.0% | |
| ! | ACGTTTTCTTTTGCAACAAA+TGG | + | chr5_4:51811032-51811051 | Msa0856820:CDS | 30.0% |
| TGTCTAAATATGCTTCTAAG+AGG | + | chr5_4:51811281-51811300 | Msa0856820:CDS | 30.0% | |
| ! | GTCTAAATATGCTTCTAAGA+GGG | + | chr5_4:51811282-51811301 | Msa0856820:CDS | 30.0% |
| !!! | GAACGAAAATAAGGGTTTTT+TGG | - | chr5_4:51811334-51811353 | None:intergenic | 30.0% |
| AGCACTTTGAACGAAAATAA+GGG | - | chr5_4:51811342-51811361 | None:intergenic | 30.0% | |
| AACAAGATTTGGGAAAGATT+TGG | + | chr5_4:51809506-51809525 | Msa0856820:CDS | 30.0% | |
| ACAAGATTTGGGAAAGATTT+GGG | + | chr5_4:51809507-51809526 | Msa0856820:CDS | 30.0% | |
| ! | TCTGTAGATTTCAAGTATGA+AGG | + | chr5_4:51809621-51809640 | Msa0856820:CDS | 30.0% |
| !!! | AACGAAAAGAAGGGTTTTTT+GGG | - | chr5_4:51809797-51809816 | None:intergenic | 30.0% |
| AAATCAATGCGAATAACGTT+TGG | + | chr5_4:51810052-51810071 | Msa0856820:CDS | 30.0% | |
| TTGGATTCTTTAGATTTGCA+AGG | + | chr5_4:51810071-51810090 | Msa0856820:CDS | 30.0% | |
| TGGATTCTTTAGATTTGCAA+GGG | + | chr5_4:51810072-51810091 | Msa0856820:CDS | 30.0% | |
| ACAGCCTCTTATGTAAAAAT+AGG | + | chr5_4:51810386-51810405 | Msa0856820:intron | 30.0% | |
| CAGCCTCTTATGTAAAAATA+GGG | + | chr5_4:51810387-51810406 | Msa0856820:intron | 30.0% | |
| AAGAATAATGAACTCGTATG+TGG | - | chr5_4:51810656-51810675 | None:intergenic | 30.0% | |
| ATTACTTATTGAATTGCAGG+CGG | + | chr5_4:51810724-51810743 | Msa0856820:intron | 30.0% | |
| !! | GGAATCCAAACATTTTAAGA+AGG | + | chr5_4:51810760-51810779 | Msa0856820:CDS | 30.0% |
| TATGGCCTTCTTAAAATGTT+TGG | - | chr5_4:51810768-51810787 | None:intergenic | 30.0% | |
| ! | ACAATTTGTTTGGCATGAAT+GGG | - | chr5_4:51810800-51810819 | None:intergenic | 30.0% |
| ! | TACAATTTGTTTGGCATGAA+TGG | - | chr5_4:51810801-51810820 | None:intergenic | 30.0% |
| !! | TAACTCATCGGTTCTAATAT+AGG | - | chr5_4:51810864-51810883 | None:intergenic | 30.0% |
| ! | ATTTTCCAAATTAGACCATC+CGG | - | chr5_4:51810989-51811008 | None:intergenic | 30.0% |
| AAAATGGAGTTGAAGATATG+TGG | + | chr5_4:51811004-51811023 | Msa0856820:CDS | 30.0% | |
| ! | ACGTTTTCTTTTGCAACAAA+TGG | + | chr5_4:51811032-51811051 | Msa0856820:CDS | 30.0% |
| TGTCTAAATATGCTTCTAAG+AGG | + | chr5_4:51811281-51811300 | Msa0856820:CDS | 30.0% | |
| ! | GTCTAAATATGCTTCTAAGA+GGG | + | chr5_4:51811282-51811301 | Msa0856820:CDS | 30.0% |
| !!! | GAACGAAAATAAGGGTTTTT+TGG | - | chr5_4:51811334-51811353 | None:intergenic | 30.0% |
| AGCACTTTGAACGAAAATAA+GGG | - | chr5_4:51811342-51811361 | None:intergenic | 30.0% | |
| ! | ATGATGGAAGTAAAGAAACG+TGG | + | chr5_4:51809531-51809550 | Msa0856820:CDS | 35.0% |
| GAACACTACTCTATCTGTTA+TGG | + | chr5_4:51809594-51809613 | Msa0856820:CDS | 35.0% | |
| !!! | CTTCCCAGTTTTGAATAGAT+AGG | - | chr5_4:51809697-51809716 | None:intergenic | 35.0% |
| TTCAAAACTGGGAAGACTAA+TGG | + | chr5_4:51809702-51809721 | Msa0856820:CDS | 35.0% | |
| !!! | AAAAGAAGGGTTTTTTGGGT+TGG | - | chr5_4:51809793-51809812 | None:intergenic | 35.0% |
| !!! | GAACGAAAAGAAGGGTTTTT+TGG | - | chr5_4:51809798-51809817 | None:intergenic | 35.0% |
| ATATCGACAGTCAAAGGATT+GGG | - | chr5_4:51809820-51809839 | None:intergenic | 35.0% | |
| TTCAAGCTCCAAAATTCTCA+AGG | + | chr5_4:51809986-51810005 | Msa0856820:CDS | 35.0% | |
| ! | ACTGCTTTCCTTGAGAATTT+TGG | - | chr5_4:51809997-51810016 | None:intergenic | 35.0% |
| AAAATTCTCAAGGAAAGCAG+TGG | + | chr5_4:51809996-51810015 | Msa0856820:CDS | 35.0% | |
| AAATTCTCAAGGAAAGCAGT+GGG | + | chr5_4:51809997-51810016 | Msa0856820:CDS | 35.0% | |
| TGTGTATTGAATAAAAGCGG+TGG | + | chr5_4:51810028-51810047 | Msa0856820:CDS | 35.0% | |
| AGGGAAAACAATCTATCAGA+TGG | + | chr5_4:51810091-51810110 | Msa0856820:CDS | 35.0% | |
| !!! | AGGTAGTTTTGTTGGTTGTT+AGG | + | chr5_4:51810276-51810295 | Msa0856820:intron | 35.0% |
| AGCTATCATCAATGACTGAA+AGG | + | chr5_4:51810315-51810334 | Msa0856820:intron | 35.0% | |
| TACAATACGCCAAAAATGGT+GGG | + | chr5_4:51810420-51810439 | Msa0856820:intron | 35.0% | |
| TAGCAATAAAAAGGGCAATC+TGG | - | chr5_4:51810486-51810505 | None:intergenic | 35.0% | |
| GCTATCATCAATGAGCAATA+TGG | + | chr5_4:51810502-51810521 | Msa0856820:intron | 35.0% | |
| GGATGGTCTAATTTGGAAAA+TGG | + | chr5_4:51810988-51811007 | Msa0856820:CDS | 35.0% | |
| AAGTGAGAGTCAAGAGAAAA+AGG | + | chr5_4:51811249-51811268 | Msa0856820:CDS | 35.0% | |
| GAGCACTTTGAACGAAAATA+AGG | - | chr5_4:51811343-51811362 | None:intergenic | 35.0% | |
| ! | ATGATGGAAGTAAAGAAACG+TGG | + | chr5_4:51809531-51809550 | Msa0856820:CDS | 35.0% |
| GAACACTACTCTATCTGTTA+TGG | + | chr5_4:51809594-51809613 | Msa0856820:CDS | 35.0% | |
| !!! | CTTCCCAGTTTTGAATAGAT+AGG | - | chr5_4:51809697-51809716 | None:intergenic | 35.0% |
| TTCAAAACTGGGAAGACTAA+TGG | + | chr5_4:51809702-51809721 | Msa0856820:CDS | 35.0% | |
| !!! | AAAAGAAGGGTTTTTTGGGT+TGG | - | chr5_4:51809793-51809812 | None:intergenic | 35.0% |
| !!! | GAACGAAAAGAAGGGTTTTT+TGG | - | chr5_4:51809798-51809817 | None:intergenic | 35.0% |
| ATATCGACAGTCAAAGGATT+GGG | - | chr5_4:51809820-51809839 | None:intergenic | 35.0% | |
| TTCAAGCTCCAAAATTCTCA+AGG | + | chr5_4:51809986-51810005 | Msa0856820:CDS | 35.0% | |
| ! | ACTGCTTTCCTTGAGAATTT+TGG | - | chr5_4:51809997-51810016 | None:intergenic | 35.0% |
| AAAATTCTCAAGGAAAGCAG+TGG | + | chr5_4:51809996-51810015 | Msa0856820:CDS | 35.0% | |
| AAATTCTCAAGGAAAGCAGT+GGG | + | chr5_4:51809997-51810016 | Msa0856820:CDS | 35.0% | |
| TGTGTATTGAATAAAAGCGG+TGG | + | chr5_4:51810028-51810047 | Msa0856820:CDS | 35.0% | |
| AGGGAAAACAATCTATCAGA+TGG | + | chr5_4:51810091-51810110 | Msa0856820:CDS | 35.0% | |
| !!! | AGGTAGTTTTGTTGGTTGTT+AGG | + | chr5_4:51810276-51810295 | Msa0856820:intron | 35.0% |
| AGCTATCATCAATGACTGAA+AGG | + | chr5_4:51810315-51810334 | Msa0856820:intron | 35.0% | |
| TACAATACGCCAAAAATGGT+GGG | + | chr5_4:51810420-51810439 | Msa0856820:intron | 35.0% | |
| TAGCAATAAAAAGGGCAATC+TGG | - | chr5_4:51810486-51810505 | None:intergenic | 35.0% | |
| GCTATCATCAATGAGCAATA+TGG | + | chr5_4:51810502-51810521 | Msa0856820:intron | 35.0% | |
| GGATGGTCTAATTTGGAAAA+TGG | + | chr5_4:51810988-51811007 | Msa0856820:CDS | 35.0% | |
| AAGTGAGAGTCAAGAGAAAA+AGG | + | chr5_4:51811249-51811268 | Msa0856820:CDS | 35.0% | |
| GAGCACTTTGAACGAAAATA+AGG | - | chr5_4:51811343-51811362 | None:intergenic | 35.0% | |
| ! | ATCACCCTTCCTCTAAAGAT+TGG | + | chr5_4:51809454-51809473 | Msa0856820:CDS | 40.0% |
| ! | GTGACCAATCTTTAGAGGAA+GGG | - | chr5_4:51809461-51809480 | None:intergenic | 40.0% |
| ! | AGTGACCAATCTTTAGAGGA+AGG | - | chr5_4:51809462-51809481 | None:intergenic | 40.0% |
| CTGTAGTGACCAATCTTTAG+AGG | - | chr5_4:51809466-51809485 | None:intergenic | 40.0% | |
| TGGGAAAGATTTGGGAATGA+TGG | + | chr5_4:51809515-51809534 | Msa0856820:CDS | 40.0% | |
| ATAGAGTAGTGTTCTGCGAA+CGG | - | chr5_4:51809588-51809607 | None:intergenic | 40.0% | |
| ! | TGTTCTTTTCGGAGCAAAGT+TGG | - | chr5_4:51809751-51809770 | None:intergenic | 40.0% |
| CTTTGCTCCGAAAAGAACAA+AGG | + | chr5_4:51809752-51809771 | Msa0856820:CDS | 40.0% | |
| ! | GCAGCATCCTTTGTTCTTTT+CGG | - | chr5_4:51809762-51809781 | None:intergenic | 40.0% |
| !!! | GTTTTTTGGGTTGGTTCCAT+TGG | - | chr5_4:51809784-51809803 | None:intergenic | 40.0% |
| AGGATTGGGAACGAAAAGAA+GGG | - | chr5_4:51809806-51809825 | None:intergenic | 40.0% | |
| AAGGATTGGGAACGAAAAGA+AGG | - | chr5_4:51809807-51809826 | None:intergenic | 40.0% | |
| CATATCGACAGTCAAAGGAT+TGG | - | chr5_4:51809821-51809840 | None:intergenic | 40.0% | |
| ATCCTTTGACTGTCGATATG+CGG | + | chr5_4:51809821-51809840 | Msa0856820:CDS | 40.0% | |
| AGCAGGAACATACTACACAA+TGG | - | chr5_4:51809930-51809949 | None:intergenic | 40.0% | |
| TGGAGCTTGAACAGAACATT+TGG | - | chr5_4:51809977-51809996 | None:intergenic | 40.0% | |
| ACGAGTTTGAGCTTATCAAG+AGG | + | chr5_4:51810122-51810141 | Msa0856820:CDS | 40.0% | |
| GTAACTTAGAACAGAACACG+CGG | - | chr5_4:51810151-51810170 | None:intergenic | 40.0% | |
| CTAAGTTACAGCTTCTCACA+CGG | + | chr5_4:51810162-51810181 | Msa0856820:intron | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | + | chr5_4:51810342-51810361 | Msa0856820:intron | 40.0% | |
| ! | TTACATAAGAGGCTGTTTCC+AGG | - | chr5_4:51810382-51810401 | None:intergenic | 40.0% |
| TGCGTACAATACGCCAAAAA+TGG | + | chr5_4:51810416-51810435 | Msa0856820:intron | 40.0% | |
| GTACAATACGCCAAAAATGG+TGG | + | chr5_4:51810419-51810438 | Msa0856820:intron | 40.0% | |
| TGTTGCTACAGTTACTGTTC+CGG | + | chr5_4:51810967-51810986 | Msa0856820:CDS | 40.0% | |
| GGACTATGACACTCTTTGTT+TGG | - | chr5_4:51811205-51811224 | None:intergenic | 40.0% | |
| !! | ACAAAGAGTGTCATAGTCCT+AGG | + | chr5_4:51811206-51811225 | Msa0856820:CDS | 40.0% |
| AGTGTCATAGTCCTAGGAAA+AGG | + | chr5_4:51811212-51811231 | Msa0856820:CDS | 40.0% | |
| !!! | GTTTTTTGGGCTGAATGCAT+TGG | - | chr5_4:51811320-51811339 | None:intergenic | 40.0% |
| ! | TTTCGTTCAAAGTGCTCCAA+AGG | + | chr5_4:51811346-51811365 | Msa0856820:CDS | 40.0% |
| ! | ATCACCCTTCCTCTAAAGAT+TGG | + | chr5_4:51809454-51809473 | Msa0856820:CDS | 40.0% |
| ! | GTGACCAATCTTTAGAGGAA+GGG | - | chr5_4:51809461-51809480 | None:intergenic | 40.0% |
| ! | AGTGACCAATCTTTAGAGGA+AGG | - | chr5_4:51809462-51809481 | None:intergenic | 40.0% |
| CTGTAGTGACCAATCTTTAG+AGG | - | chr5_4:51809466-51809485 | None:intergenic | 40.0% | |
| TGGGAAAGATTTGGGAATGA+TGG | + | chr5_4:51809515-51809534 | Msa0856820:CDS | 40.0% | |
| ATAGAGTAGTGTTCTGCGAA+CGG | - | chr5_4:51809588-51809607 | None:intergenic | 40.0% | |
| ! | TGTTCTTTTCGGAGCAAAGT+TGG | - | chr5_4:51809751-51809770 | None:intergenic | 40.0% |
| CTTTGCTCCGAAAAGAACAA+AGG | + | chr5_4:51809752-51809771 | Msa0856820:CDS | 40.0% | |
| ! | GCAGCATCCTTTGTTCTTTT+CGG | - | chr5_4:51809762-51809781 | None:intergenic | 40.0% |
| !!! | GTTTTTTGGGTTGGTTCCAT+TGG | - | chr5_4:51809784-51809803 | None:intergenic | 40.0% |
| AGGATTGGGAACGAAAAGAA+GGG | - | chr5_4:51809806-51809825 | None:intergenic | 40.0% | |
| AAGGATTGGGAACGAAAAGA+AGG | - | chr5_4:51809807-51809826 | None:intergenic | 40.0% | |
| CATATCGACAGTCAAAGGAT+TGG | - | chr5_4:51809821-51809840 | None:intergenic | 40.0% | |
| ATCCTTTGACTGTCGATATG+CGG | + | chr5_4:51809821-51809840 | Msa0856820:CDS | 40.0% | |
| AGCAGGAACATACTACACAA+TGG | - | chr5_4:51809930-51809949 | None:intergenic | 40.0% | |
| TGGAGCTTGAACAGAACATT+TGG | - | chr5_4:51809977-51809996 | None:intergenic | 40.0% | |
| ACGAGTTTGAGCTTATCAAG+AGG | + | chr5_4:51810122-51810141 | Msa0856820:CDS | 40.0% | |
| GTAACTTAGAACAGAACACG+CGG | - | chr5_4:51810151-51810170 | None:intergenic | 40.0% | |
| CTAAGTTACAGCTTCTCACA+CGG | + | chr5_4:51810162-51810181 | Msa0856820:intron | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | + | chr5_4:51810342-51810361 | Msa0856820:intron | 40.0% | |
| ! | TTACATAAGAGGCTGTTTCC+AGG | - | chr5_4:51810382-51810401 | None:intergenic | 40.0% |
| TGCGTACAATACGCCAAAAA+TGG | + | chr5_4:51810416-51810435 | Msa0856820:intron | 40.0% | |
| GTACAATACGCCAAAAATGG+TGG | + | chr5_4:51810419-51810438 | Msa0856820:intron | 40.0% | |
| TGTTGCTACAGTTACTGTTC+CGG | + | chr5_4:51810967-51810986 | Msa0856820:CDS | 40.0% | |
| GGACTATGACACTCTTTGTT+TGG | - | chr5_4:51811205-51811224 | None:intergenic | 40.0% | |
| !! | ACAAAGAGTGTCATAGTCCT+AGG | + | chr5_4:51811206-51811225 | Msa0856820:CDS | 40.0% |
| AGTGTCATAGTCCTAGGAAA+AGG | + | chr5_4:51811212-51811231 | Msa0856820:CDS | 40.0% | |
| !!! | GTTTTTTGGGCTGAATGCAT+TGG | - | chr5_4:51811320-51811339 | None:intergenic | 40.0% |
| ! | TTTCGTTCAAAGTGCTCCAA+AGG | + | chr5_4:51811346-51811365 | Msa0856820:CDS | 40.0% |
| TTGGAAGAACGCGTTGTGTT+TGG | - | chr5_4:51809732-51809751 | None:intergenic | 45.0% | |
| AGAACAAAGGATGCTGCCAA+TGG | + | chr5_4:51809765-51809784 | Msa0856820:CDS | 45.0% | |
| TACTTTGCAGCGAATTCAGC+AGG | - | chr5_4:51809947-51809966 | None:intergenic | 45.0% | |
| AAGGTCATGTGTTCAAGTCC+TGG | + | chr5_4:51810361-51810380 | Msa0856820:intron | 45.0% | |
| TATTGAATTGCAGGCGGAGA+AGG | + | chr5_4:51810730-51810749 | Msa0856820:intron | 45.0% | |
| !! | ATGAATGGGTGACGGAAGTA+TGG | - | chr5_4:51810786-51810805 | None:intergenic | 45.0% |
| TGTTTGGCATGAATGGGTGA+CGG | - | chr5_4:51810794-51810813 | None:intergenic | 45.0% | |
| CTGTTCCGGATGGTCTAATT+TGG | + | chr5_4:51810981-51811000 | Msa0856820:CDS | 45.0% | |
| GGAGTTGAAGATATGTGGCA+AGG | + | chr5_4:51811009-51811028 | Msa0856820:CDS | 45.0% | |
| TAGTCCTAGGAAAAGGTCCA+AGG | + | chr5_4:51811219-51811238 | Msa0856820:CDS | 45.0% | |
| ACTCTCACTTGTTTCGACCT+TGG | - | chr5_4:51811239-51811258 | None:intergenic | 45.0% | |
| ! | ATATGCTTCTAAGAGGGCTG+AGG | + | chr5_4:51811288-51811307 | Msa0856820:CDS | 45.0% |
| GTGCTCCAAAGGAAGATATG+TGG | + | chr5_4:51811357-51811376 | Msa0856820:CDS | 45.0% | |
| CCTCACCACATATCTTCCTT+TGG | - | chr5_4:51811365-51811384 | None:intergenic | 45.0% | |
| CCAAAGGAAGATATGTGGTG+AGG | + | chr5_4:51811362-51811381 | Msa0856820:CDS | 45.0% | |
| !!! | TTGTAGTTTTTGGTTCCGCG+TGG | + | chr5_4:51811393-51811412 | Msa0856820:CDS | 45.0% |
| AATCACGATAGTCAACCACG+CGG | - | chr5_4:51811411-51811430 | None:intergenic | 45.0% | |
| TTGGAAGAACGCGTTGTGTT+TGG | - | chr5_4:51809732-51809751 | None:intergenic | 45.0% | |
| AGAACAAAGGATGCTGCCAA+TGG | + | chr5_4:51809765-51809784 | Msa0856820:CDS | 45.0% | |
| TACTTTGCAGCGAATTCAGC+AGG | - | chr5_4:51809947-51809966 | None:intergenic | 45.0% | |
| AAGGTCATGTGTTCAAGTCC+TGG | + | chr5_4:51810361-51810380 | Msa0856820:intron | 45.0% | |
| TATTGAATTGCAGGCGGAGA+AGG | + | chr5_4:51810730-51810749 | Msa0856820:intron | 45.0% | |
| !! | ATGAATGGGTGACGGAAGTA+TGG | - | chr5_4:51810786-51810805 | None:intergenic | 45.0% |
| TGTTTGGCATGAATGGGTGA+CGG | - | chr5_4:51810794-51810813 | None:intergenic | 45.0% | |
| CTGTTCCGGATGGTCTAATT+TGG | + | chr5_4:51810981-51811000 | Msa0856820:CDS | 45.0% | |
| GGAGTTGAAGATATGTGGCA+AGG | + | chr5_4:51811009-51811028 | Msa0856820:CDS | 45.0% | |
| TAGTCCTAGGAAAAGGTCCA+AGG | + | chr5_4:51811219-51811238 | Msa0856820:CDS | 45.0% | |
| ACTCTCACTTGTTTCGACCT+TGG | - | chr5_4:51811239-51811258 | None:intergenic | 45.0% | |
| ! | ATATGCTTCTAAGAGGGCTG+AGG | + | chr5_4:51811288-51811307 | Msa0856820:CDS | 45.0% |
| GTGCTCCAAAGGAAGATATG+TGG | + | chr5_4:51811357-51811376 | Msa0856820:CDS | 45.0% | |
| CCTCACCACATATCTTCCTT+TGG | - | chr5_4:51811365-51811384 | None:intergenic | 45.0% | |
| CCAAAGGAAGATATGTGGTG+AGG | + | chr5_4:51811362-51811381 | Msa0856820:CDS | 45.0% | |
| !!! | TTGTAGTTTTTGGTTCCGCG+TGG | + | chr5_4:51811393-51811412 | Msa0856820:CDS | 45.0% |
| AATCACGATAGTCAACCACG+CGG | - | chr5_4:51811411-51811430 | None:intergenic | 45.0% | |
| CACCGCATATCGACAGTCAA+AGG | - | chr5_4:51809826-51809845 | None:intergenic | 50.0% | |
| CTAAAGCTCCCGCATACTCA+GGG | - | chr5_4:51810459-51810478 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATACTC+AGG | - | chr5_4:51810460-51810479 | None:intergenic | 50.0% | |
| TGAGAGATAGAGAGAGCGAG+AGG | - | chr5_4:51810831-51810850 | None:intergenic | 50.0% | |
| GCTACAGTTACTGTTCCGGA+TGG | + | chr5_4:51810971-51810990 | Msa0856820:CDS | 50.0% | |
| ! | TCGACCTTGGACCTTTTCCT+AGG | - | chr5_4:51811226-51811245 | None:intergenic | 50.0% |
| CACCGCATATCGACAGTCAA+AGG | - | chr5_4:51809826-51809845 | None:intergenic | 50.0% | |
| CTAAAGCTCCCGCATACTCA+GGG | - | chr5_4:51810459-51810478 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATACTC+AGG | - | chr5_4:51810460-51810479 | None:intergenic | 50.0% | |
| TGAGAGATAGAGAGAGCGAG+AGG | - | chr5_4:51810831-51810850 | None:intergenic | 50.0% | |
| GCTACAGTTACTGTTCCGGA+TGG | + | chr5_4:51810971-51810990 | Msa0856820:CDS | 50.0% | |
| ! | TCGACCTTGGACCTTTTCCT+AGG | - | chr5_4:51811226-51811245 | None:intergenic | 50.0% |
| ! | GGAAGGGGTCCCACCATTTT+TGG | - | chr5_4:51810432-51810451 | None:intergenic | 55.0% |
| ! | AAAATGGTGGGACCCCTTCC+CGG | + | chr5_4:51810432-51810451 | Msa0856820:intron | 55.0% |
| TGCAGGCGGAGAAGGAAGTT+AGG | + | chr5_4:51810738-51810757 | Msa0856820:intron | 55.0% | |
| GCAGGCGGAGAAGGAAGTTA+GGG | + | chr5_4:51810739-51810758 | Msa0856820:intron | 55.0% | |
| ! | GGAAGGGGTCCCACCATTTT+TGG | - | chr5_4:51810432-51810451 | None:intergenic | 55.0% |
| ! | AAAATGGTGGGACCCCTTCC+CGG | + | chr5_4:51810432-51810451 | Msa0856820:intron | 55.0% |
| TGCAGGCGGAGAAGGAAGTT+AGG | + | chr5_4:51810738-51810757 | Msa0856820:intron | 55.0% | |
| GCAGGCGGAGAAGGAAGTTA+GGG | + | chr5_4:51810739-51810758 | Msa0856820:intron | 55.0% | |
| CATACTCAGGGTCCGGGAAG+GGG | - | chr5_4:51810447-51810466 | None:intergenic | 60.0% | |
| GCATACTCAGGGTCCGGGAA+GGG | - | chr5_4:51810448-51810467 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGAGTATG+CGG | + | chr5_4:51810447-51810466 | Msa0856820:intron | 60.0% | |
| TTCCCGGACCCTGAGTATGC+GGG | + | chr5_4:51810448-51810467 | Msa0856820:intron | 60.0% | |
| CATACTCAGGGTCCGGGAAG+GGG | - | chr5_4:51810447-51810466 | None:intergenic | 60.0% | |
| GCATACTCAGGGTCCGGGAA+GGG | - | chr5_4:51810448-51810467 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGAGTATG+CGG | + | chr5_4:51810447-51810466 | Msa0856820:intron | 60.0% | |
| TTCCCGGACCCTGAGTATGC+GGG | + | chr5_4:51810448-51810467 | Msa0856820:intron | 60.0% | |
| CGCATACTCAGGGTCCGGGA+AGG | - | chr5_4:51810449-51810468 | None:intergenic | 65.0% | |
| CTCCCGCATACTCAGGGTCC+GGG | - | chr5_4:51810453-51810472 | None:intergenic | 65.0% | |
| GCTCCCGCATACTCAGGGTC+CGG | - | chr5_4:51810454-51810473 | None:intergenic | 65.0% | |
| CGCATACTCAGGGTCCGGGA+AGG | - | chr5_4:51810449-51810468 | None:intergenic | 65.0% | |
| CTCCCGCATACTCAGGGTCC+GGG | - | chr5_4:51810453-51810472 | None:intergenic | 65.0% | |
| GCTCCCGCATACTCAGGGTC+CGG | - | chr5_4:51810454-51810473 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 51809450 | 51811432 | 51809450 | ID=Msa0856820;Name=Msa0856820 |
| chr5_4 | mRNA | 51809450 | 51811432 | 51809450 | ID=Msa0856820-mRNA-1;Parent=Msa0856820;Name=Msa0856820-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.66|0|1|1|1|4|0|398 |
| chr5_4 | exon | 51809450 | 51809842 | 51809450 | ID=Msa0856820-mRNA-1:exon:16138;Parent=Msa0856820-mRNA-1 |
| chr5_4 | exon | 51809938 | 51810153 | 51809938 | ID=Msa0856820-mRNA-1:exon:16139;Parent=Msa0856820-mRNA-1 |
| chr5_4 | exon | 51810743 | 51810817 | 51810743 | ID=Msa0856820-mRNA-1:exon:16140;Parent=Msa0856820-mRNA-1 |
| chr5_4 | exon | 51810920 | 51811432 | 51810920 | ID=Msa0856820-mRNA-1:exon:16141;Parent=Msa0856820-mRNA-1 |
| chr5_4 | CDS | 51809450 | 51809842 | 51809450 | ID=Msa0856820-mRNA-1:cds;Parent=Msa0856820-mRNA-1 |
| chr5_4 | CDS | 51809938 | 51810153 | 51809938 | ID=Msa0856820-mRNA-1:cds;Parent=Msa0856820-mRNA-1 |
| chr5_4 | CDS | 51810743 | 51810817 | 51810743 | ID=Msa0856820-mRNA-1:cds;Parent=Msa0856820-mRNA-1 |
| chr5_4 | CDS | 51810920 | 51811432 | 51810920 | ID=Msa0856820-mRNA-1:cds;Parent=Msa0856820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
