AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0856980


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0856980 MtrunA17_Chr5g0435401 76.485 404 29 8 1 347 1 395 0.0 576
Msa0856980 MtrunA17_Chr5g0435401 55.484 155 46 5 398 535 264 412 1.02e-37 144
Msa0856980 MtrunA17_Chr5g0435401 80.822 73 14 0 388 460 178 250 2.23e-33 131
Msa0856980 MtrunA17_Chr1g0192841 48.889 180 62 4 171 347 74 226 1.54e-41 149
Msa0856980 MtrunA17_Chr1g0192841 44.776 201 60 4 386 535 43 243 7.41e-37 137
Msa0856980 MtrunA17_Chr5g0445971 56.934 137 35 4 43 161 34 164 1.68e-36 133
Msa0856980 MtrunA17_Chr5g0435411 68.254 63 18 1 348 408 9 71 2.30e-21 88.2
Msa0856980 MtrunA17_Chr5g0435431 64.615 65 17 2 348 408 9 71 1.03e-20 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 101 sgRNAs with CRISPR-Local

Find 952 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGATCTTCAGTGCTCTTT+TGG 0.157665 5_4:-51995787 None:intergenic
CACTAGTTTATCTCAATTAA+TGG 0.164628 5_4:+51994439 Msa0856980:CDS
ATTCAAATCACCTGGGAAAA+AGG 0.184616 5_4:-51995945 None:intergenic
AAAGCTGATCATCAGTTTAA+AGG 0.190474 5_4:+51995543 Msa0856980:CDS
ATTCAAATCACCTGGGAAAA+AGG 0.212489 5_4:-52000564 None:intergenic
CCAGTTGCAGTTTGAGTTGC+AGG 0.228640 5_4:-51994211 None:intergenic
TCGTAAGCTCACTGAGCTTT+TGG 0.297529 5_4:+51993118 Msa0856980:CDS
TTATATCCACTCTGACCTAT+TGG 0.347768 5_4:-52000097 None:intergenic
TTATATCCACTCTGTCCTAT+TGG 0.357025 5_4:-51995151 None:intergenic
AGAGGAAAGCATGAAGATAA+AGG 0.358251 5_4:+51995742 Msa0856980:intron
ATCCGACAACCGCTGTGTTT+TGG 0.358584 5_4:-51998460 None:intergenic
CTCTCAGTGAGGATATAATA+TGG 0.364315 5_4:-51993089 None:intergenic
AGTTGTTTCTGCTCTAAAAC+TGG 0.365684 5_4:+51994099 Msa0856980:CDS
TTCACGCTTGCCTCTTCATA+TGG 0.385956 5_4:-51995399 None:intergenic
AGGTTGATCAAGAAAAGAAA+TGG 0.402611 5_4:+51994071 Msa0856980:intron
AGAGGCAAGCGTGAAGATAA+AGG 0.407513 5_4:+51995407 Msa0856980:CDS
GTTGTCAGACAAGGAGAAAC+AGG 0.408256 5_4:+51995270 Msa0856980:CDS
CCTCTGTCAAACTACTCTTT+TGG 0.416635 5_4:+51995866 Msa0856980:CDS
TTAATTTCATTAATGGAAGA+AGG 0.420089 5_4:+51992969 None:intergenic
TGGAGATTGAAGAAGGTTGC+CGG 0.426728 5_4:+51998434 Msa0856980:intron
GTTGTCAGACAAGGAGAAAC+AGG 0.430794 5_4:+52000216 Msa0856980:CDS
GACTACTCTAGTCAAATTAC+AGG 0.434649 5_4:+51994500 Msa0856980:CDS
CCTGCAACTCAAACTGCAAC+TGG 0.435997 5_4:+51994211 Msa0856980:CDS
TTGAGACATTGTACTTCTAC+AGG 0.444314 5_4:+51994185 Msa0856980:CDS
TGAAGAGTGAAGATCTTAAG+AGG 0.445714 5_4:+52000411 Msa0856980:CDS
ACTGCAACTGGCAGCAATAC+AGG 0.446573 5_4:+51994223 Msa0856980:CDS
TAGTAGTCACCACACACATT+AGG 0.452991 5_4:-52000446 None:intergenic
AGGAAAGGAATTAGTAGTGA+TGG 0.453771 5_4:+51992989 Msa0856980:CDS
AGAACAAAGAAAAGAAGAAA+CGG 0.457756 5_4:+51995119 Msa0856980:CDS
TACTTGGAGGTCACGAAAAG+AGG 0.458176 5_4:+51993675 Msa0856980:intron
TAGTAGTCACCACACACAAT+AGG 0.458403 5_4:-51995827 None:intergenic
ACAAAAGAGTAGTTTGATAG+AGG 0.458832 5_4:-52000485 None:intergenic
AAACGGAGACGTGCTCCAAT+AGG 0.460049 5_4:+52000082 Msa0856980:CDS
TAATGACTAGACTTGTTGTT+GGG 0.460326 5_4:+52000627 Msa0856980:CDS
AAACGGAGAGGTGCTCCAAT+AGG 0.474962 5_4:+51995136 Msa0856980:CDS
TGATTTGAATGCTTGTCGTT+CGG 0.477683 5_4:+52000577 Msa0856980:CDS
TTCATTAATGGAAGAAGGAA+AGG 0.479210 5_4:+51992974 None:intergenic
TATGCACTCTTCTGTCCCCT+TGG 0.481011 5_4:-51995486 None:intergenic
TCGTCTAAAAGCTGATCATC+AGG 0.483966 5_4:+52000144 Msa0856980:CDS
CGACAAGCATTCAAATCACC+TGG 0.487547 5_4:-52000572 None:intergenic
TTCATCAATGGAAGAAGCAA+AGG 0.491657 5_4:+51993046 Msa0856980:CDS
GGTTGATCAAGAAAAGAAAT+GGG 0.491923 5_4:+51994072 Msa0856980:intron
TTAATGACTAGACTTGTTGT+TGG 0.492408 5_4:+52000626 Msa0856980:CDS
GGTTTATTCAACGAAGAAGA+AGG 0.495785 5_4:+51998528 Msa0856980:CDS
CTTTATAAGGTCCAGTTGAA+AGG 0.507012 5_4:+51994402 Msa0856980:intron
TTCTTCGTTGAATAAACCAC+CGG 0.508962 5_4:-51998523 None:intergenic
AGAAGCAAAGGAATTAGAGA+TGG 0.514965 5_4:+51993058 Msa0856980:CDS
CACCAAAACACAGCGGTTGT+CGG 0.521171 5_4:+51998458 Msa0856980:CDS
ATAACAAAGAAAAGAAGAAA+CGG 0.522686 5_4:+52000065 Msa0856980:CDS
GACGAGCACATTCCTGCTTG+AGG 0.523607 5_4:-52000126 None:intergenic
TAGACATGGCTATTGATGCT+TGG 0.537672 5_4:+52000188 Msa0856980:CDS
TAGAGATGGCTATTGATGCT+TGG 0.538363 5_4:+51995242 Msa0856980:CDS
GAAGAAGAAGGCCCCACCGA+AGG 0.545060 5_4:+51998540 Msa0856980:CDS
TCGACTTAAAGCTTATCATC+AGG 0.545141 5_4:+51995198 Msa0856980:CDS
GGATTGAAGTAACCATCCTT+CGG 0.555826 5_4:-51998556 None:intergenic
GTCTAGCGCATTCATGCTTG+AGG 0.557923 5_4:-51995518 None:intergenic
AACATGAGATTGAATCCAGA+AGG 0.564550 5_4:-51993143 None:intergenic
GCCCGCGACTATGTGTCCCT+CGG 0.570147 5_4:+51998486 Msa0856980:CDS
TGAAGTAACCATCCTTCGGT+GGG 0.570885 5_4:-51998552 None:intergenic
GTTTCTGCTCTAAAACTGGA+AGG 0.575106 5_4:+51994103 Msa0856980:CDS
GCCGAGGGACACATAGTCGC+GGG 0.578000 5_4:-51998487 None:intergenic
TTTCATGTAGCCATATGAAG+AGG 0.580743 5_4:+51995389 Msa0856980:intron
AAGAAGGCCCCACCGAAGGA+TGG 0.585344 5_4:+51998544 Msa0856980:CDS
ATATAATATATTCCTCAAGC+AGG 0.589592 5_4:+51995168 Msa0856980:CDS
ATATAATATATTCCTCAAGC+AGG 0.589592 5_4:+52000114 Msa0856980:CDS
GCTGATCATCAGGACATATG+TGG 0.590919 5_4:+52000154 Msa0856980:CDS
GTCGAGCACACTCCTGCTTG+AGG 0.592986 5_4:-51995180 None:intergenic
GAGCACTGAAGATCTTGAGA+GGG 0.594444 5_4:+51995793 Msa0856980:CDS
AAAGAAAAGAAGAAACATAG+AGG 0.596397 5_4:+51995459 Msa0856980:CDS
AGAGCACTGAAGATCTTGAG+AGG 0.596789 5_4:+51995792 Msa0856980:CDS
GAAACATAGAGGTGTTCCAA+GGG 0.597227 5_4:+51995470 Msa0856980:CDS
TTGAAGTAACCATCCTTCGG+TGG 0.600524 5_4:-51998553 None:intergenic
TGGCAGAGAAATTGTAGACA+TGG 0.605105 5_4:+52000174 Msa0856980:CDS
GAAGAGTGAAGATCTTAAGA+GGG 0.607591 5_4:+52000412 Msa0856980:CDS
AGAAACATAGAGGTGTTCCA+AGG 0.610697 5_4:+51995469 Msa0856980:CDS
TGCCGAGGGACACATAGTCG+CGG 0.615823 5_4:-51998488 None:intergenic
CCAAAAGAGTAGTTTGACAG+AGG 0.617143 5_4:-51995866 None:intergenic
GCTTATCATCAGGACGTAGG+TGG 0.622815 5_4:+51995208 Msa0856980:CDS
GGAATTAGTAGTGATGGAGA+TGG 0.631774 5_4:+51992995 Msa0856980:CDS
TTGGAGGTCACGAAAAGAGG+AGG 0.644365 5_4:+51993678 Msa0856980:intron
GGACGAGCAAGATTATCAGA+AGG 0.655330 5_4:+51994460 Msa0856980:CDS
TTGGAATAAGTTGTCAGACA+AGG 0.660735 5_4:+51995261 Msa0856980:CDS
TTGGAACAAGTTGTCAGACA+AGG 0.660817 5_4:+52000207 Msa0856980:CDS
AAAGCTCAGTGAGCTTACGA+TGG 0.661623 5_4:-51993115 None:intergenic
GACAAGCATTCAAATCACCT+GGG 0.668083 5_4:-52000571 None:intergenic
ACATGAGATTGAATCCAGAA+GGG 0.670630 5_4:-51993142 None:intergenic
AAAGAAAAGAAGAAACGGAG+AGG 0.672313 5_4:+51995124 Msa0856980:CDS
AATTTGACTAGAGTAGTCCT+CGG 0.673968 5_4:-51994495 None:intergenic
GAAGTAACCATCCTTCGGTG+GGG 0.675290 5_4:-51998551 None:intergenic
AAAGCTTATCATCAGGACGT+AGG 0.684875 5_4:+51995205 Msa0856980:CDS
GGTGCTCCAATAGGACAGAG+TGG 0.688534 5_4:+51995145 Msa0856980:CDS
CATTAATTGAGATAAACTAG+TGG 0.690114 5_4:-51994438 None:intergenic
CGTGCTCCAATAGGTCAGAG+TGG 0.690376 5_4:+52000091 Msa0856980:CDS
GAAGGCAGCAAAGATATCCG+AGG 0.700751 5_4:+51994478 Msa0856980:CDS
GTTGATCAAGAAAAGAAATG+GGG 0.707030 5_4:+51994073 Msa0856980:CDS
AAACATAGAGGTGTTCCAAG+GGG 0.716007 5_4:+51995471 Msa0856980:CDS
GAAGAGAGACCTATTGTGTG+TGG 0.716478 5_4:+51995818 Msa0856980:CDS
GAAGAGAGACCTAATGTGTG+TGG 0.716478 5_4:+52000437 Msa0856980:CDS
GAGGGACACATAGTCGCGGG+CGG 0.723461 5_4:-51998484 None:intergenic
TACGATGGAAGCTCTCAGTG+AGG 0.727693 5_4:-51993100 None:intergenic
TGCCGGACACCAAAACACAG+CGG 0.804931 5_4:+51998451 Msa0856980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATAAGAGTTTTAAATA+TGG + chr5_4:51994927-51994946 Msa0856980:intron 10.0%
!! AATTATGTATATAACTATAA+AGG + chr5_4:51996258-51996277 Msa0856980:intron 10.0%
!! CAATTGTTAAAATAATAAAT+TGG + chr5_4:51996711-51996730 Msa0856980:intron 10.0%
!!! TAAAAATCTATTTTTTTGAA+AGG - chr5_4:51997033-51997052 None:intergenic 10.0%
!!! TTCAAAAAAATAGATTTTTA+TGG + chr5_4:51997033-51997052 Msa0856980:intron 10.0%
!!! TCAAAAAAATAGATTTTTAT+GGG + chr5_4:51997034-51997053 Msa0856980:intron 10.0%
!!! TAAAATAAGAGTTTTAAATA+TGG + chr5_4:51994927-51994946 Msa0856980:intron 10.0%
!! AATTATGTATATAACTATAA+AGG + chr5_4:51996258-51996277 Msa0856980:intron 10.0%
!! CAATTGTTAAAATAATAAAT+TGG + chr5_4:51996711-51996730 Msa0856980:intron 10.0%
!!! TAAAAATCTATTTTTTTGAA+AGG - chr5_4:51997033-51997052 None:intergenic 10.0%
!!! TTCAAAAAAATAGATTTTTA+TGG + chr5_4:51997033-51997052 Msa0856980:intron 10.0%
!!! TCAAAAAAATAGATTTTTAT+GGG + chr5_4:51997034-51997053 Msa0856980:intron 10.0%
!! TTGAACAAATAAAACATATT+TGG - chr5_4:51993988-51994007 None:intergenic 15.0%
!! TCATAAAAAAAATACAACTT+TGG + chr5_4:51994652-51994671 Msa0856980:intron 15.0%
!!! TATGTAATGCAAAATTTTAT+TGG + chr5_4:51996308-51996327 Msa0856980:intron 15.0%
!!! ATTATTTTTGGATAGAAATT+TGG + chr5_4:51996463-51996482 Msa0856980:intron 15.0%
!!! GAAAAAAGTGATTTTTTTAA+GGG - chr5_4:51996839-51996858 None:intergenic 15.0%
!!! TGAAAAAAGTGATTTTTTTA+AGG - chr5_4:51996840-51996859 None:intergenic 15.0%
!!! TATATAACAAGGTATTATTT+AGG - chr5_4:51997490-51997509 None:intergenic 15.0%
!!! TGTGTTTTTAGAATTTTTTT+TGG + chr5_4:51997712-51997731 Msa0856980:intron 15.0%
!!! TTTTTAGAATTTTTTTTGGA+GGG + chr5_4:51997716-51997735 Msa0856980:intron 15.0%
!!! TAATAAATTGATTTTCAAGA+CGG + chr5_4:51997828-51997847 Msa0856980:intron 15.0%
!! TGAATTAAAGCAAAAATTAT+TGG - chr5_4:51998868-51998887 None:intergenic 15.0%
!!! TATAATTTTACTTGACTAAT+TGG + chr5_4:51999237-51999256 Msa0856980:intron 15.0%
!!! TTATGATACTTATTTTGAAT+CGG - chr5_4:51994638-51994657 None:intergenic 15.0%
!! TTGAACAAATAAAACATATT+TGG - chr5_4:51993988-51994007 None:intergenic 15.0%
!! TCATAAAAAAAATACAACTT+TGG + chr5_4:51994652-51994671 Msa0856980:intron 15.0%
!!! TATGTAATGCAAAATTTTAT+TGG + chr5_4:51996308-51996327 Msa0856980:intron 15.0%
!!! ATTATTTTTGGATAGAAATT+TGG + chr5_4:51996463-51996482 Msa0856980:intron 15.0%
!!! GAAAAAAGTGATTTTTTTAA+GGG - chr5_4:51996839-51996858 None:intergenic 15.0%
!!! TGAAAAAAGTGATTTTTTTA+AGG - chr5_4:51996840-51996859 None:intergenic 15.0%
!!! TATATAACAAGGTATTATTT+AGG - chr5_4:51997490-51997509 None:intergenic 15.0%
!!! TGTGTTTTTAGAATTTTTTT+TGG + chr5_4:51997712-51997731 Msa0856980:intron 15.0%
!!! TTTTTAGAATTTTTTTTGGA+GGG + chr5_4:51997716-51997735 Msa0856980:intron 15.0%
!!! TAATAAATTGATTTTCAAGA+CGG + chr5_4:51997828-51997847 Msa0856980:intron 15.0%
!! TGAATTAAAGCAAAAATTAT+TGG - chr5_4:51998868-51998887 None:intergenic 15.0%
!!! TATAATTTTACTTGACTAAT+TGG + chr5_4:51999237-51999256 Msa0856980:intron 15.0%
!!! TTATGATACTTATTTTGAAT+CGG - chr5_4:51994638-51994657 None:intergenic 15.0%
!!! ATCTCATTTTCATTTTCATA+TGG - chr5_4:51993023-51993042 None:intergenic 20.0%
!!! AAATGAGATTTTTTCATCAA+TGG + chr5_4:51993034-51993053 Msa0856980:CDS 20.0%
!! ACAAATAAAACATATTTGGA+TGG - chr5_4:51993984-51994003 None:intergenic 20.0%
!!! AGTTTATAATTTTACTTGAC+TGG + chr5_4:51994276-51994295 Msa0856980:intron 20.0%
!!! ATTATGTTTATGTTGCATTT+TGG + chr5_4:51994341-51994360 Msa0856980:intron 20.0%
!! ACCTTAAATTCTTCTTTATA+AGG + chr5_4:51994389-51994408 Msa0856980:intron 20.0%
!! ACCTTATAAAGAAGAATTTA+AGG - chr5_4:51994393-51994412 None:intergenic 20.0%
!!! AGATATACAATTTTAATGAG+AGG + chr5_4:51994529-51994548 Msa0856980:intron 20.0%
!!! ATTCTTTTTCATTCAATGAA+TGG - chr5_4:51994565-51994584 None:intergenic 20.0%
!!! TATGATACTTATTTTGAATC+AGG - chr5_4:51994637-51994656 None:intergenic 20.0%
!!! ACAATCCAAATTTAGTTTAA+AGG + chr5_4:51995019-51995038 Msa0856980:intron 20.0%
!! ACATGAAAAGTAATTAGAAA+TGG - chr5_4:51995377-51995396 None:intergenic 20.0%
!!! TTTCTTCTTTTCTTTGTTAT+TGG - chr5_4:51995454-51995473 None:intergenic 20.0%
!!! AACTTTGAGTTACAAAAAAA+CGG - chr5_4:51996086-51996105 None:intergenic 20.0%
!!! ACATTTGCACAAATTATTTT+TGG + chr5_4:51996451-51996470 Msa0856980:intron 20.0%
!! GATATAAAACATTGTGAAAT+TGG - chr5_4:51996692-51996711 None:intergenic 20.0%
!!! TCATTTTTAAGTGTTTGTTT+AGG + chr5_4:51996857-51996876 Msa0856980:intron 20.0%
!! ATTAACACACTTCAAAAAAA+GGG - chr5_4:51997357-51997376 None:intergenic 20.0%
!! AATTAACACACTTCAAAAAA+AGG - chr5_4:51997358-51997377 None:intergenic 20.0%
!!! GTTTTTAGAATTTTTTTTGG+AGG + chr5_4:51997715-51997734 Msa0856980:intron 20.0%
!! GGTTTATACTTATATAAAAG+AGG + chr5_4:51997805-51997824 Msa0856980:intron 20.0%
!!! AATAAATTGATTTTCAAGAC+GGG + chr5_4:51997829-51997848 Msa0856980:intron 20.0%
!!! GACAATATTTTTTTGTTTGA+TGG - chr5_4:51998099-51998118 None:intergenic 20.0%
!! TTTGAAAATGGTTATGAAAT+TGG + chr5_4:51998414-51998433 Msa0856980:intron 20.0%
!! CATGTAATTGAAATATGAAA+TGG + chr5_4:51998720-51998739 Msa0856980:intron 20.0%
!!! AAGGATATACAGTTTTATAT+AGG + chr5_4:51999190-51999209 Msa0856980:intron 20.0%
!!! ATAAAGATACAATTTTTACG+AGG + chr5_4:51999457-51999476 Msa0856980:intron 20.0%
!!! TAAAGATACAATTTTTACGA+GGG + chr5_4:51999458-51999477 Msa0856980:intron 20.0%
!! ATCATAACAGAATACAAATT+TGG + chr5_4:51999578-51999597 Msa0856980:intron 20.0%
!! TAAATACATATAGTAGCAAA+CGG - chr5_4:51994743-51994762 None:intergenic 20.0%
!!! TTCTTTTCTTTGTTATTTGT+GGG - chr5_4:52000061-52000080 None:intergenic 20.0%
!! ATAACAAAGAAAAGAAGAAA+CGG + chr5_4:51995454-51995473 Msa0856980:CDS 20.0%
!! ACATGAAAAGTAATTAGAAA+TGG - chr5_4:51995377-51995396 None:intergenic 20.0%
!!! ATCTCATTTTCATTTTCATA+TGG - chr5_4:51993023-51993042 None:intergenic 20.0%
!!! AAATGAGATTTTTTCATCAA+TGG + chr5_4:51993034-51993053 Msa0856980:CDS 20.0%
!! ACAAATAAAACATATTTGGA+TGG - chr5_4:51993984-51994003 None:intergenic 20.0%
!!! AGTTTATAATTTTACTTGAC+TGG + chr5_4:51994276-51994295 Msa0856980:intron 20.0%
!!! ATTATGTTTATGTTGCATTT+TGG + chr5_4:51994341-51994360 Msa0856980:intron 20.0%
!! ACCTTAAATTCTTCTTTATA+AGG + chr5_4:51994389-51994408 Msa0856980:intron 20.0%
!! ACCTTATAAAGAAGAATTTA+AGG - chr5_4:51994393-51994412 None:intergenic 20.0%
!!! AGATATACAATTTTAATGAG+AGG + chr5_4:51994529-51994548 Msa0856980:intron 20.0%
!!! ATTCTTTTTCATTCAATGAA+TGG - chr5_4:51994565-51994584 None:intergenic 20.0%
!!! TATGATACTTATTTTGAATC+AGG - chr5_4:51994637-51994656 None:intergenic 20.0%
!!! ACAATCCAAATTTAGTTTAA+AGG + chr5_4:51995019-51995038 Msa0856980:intron 20.0%
!! ACATGAAAAGTAATTAGAAA+TGG - chr5_4:51995377-51995396 None:intergenic 20.0%
!!! TTTCTTCTTTTCTTTGTTAT+TGG - chr5_4:51995454-51995473 None:intergenic 20.0%
!!! AACTTTGAGTTACAAAAAAA+CGG - chr5_4:51996086-51996105 None:intergenic 20.0%
!!! ACATTTGCACAAATTATTTT+TGG + chr5_4:51996451-51996470 Msa0856980:intron 20.0%
!! GATATAAAACATTGTGAAAT+TGG - chr5_4:51996692-51996711 None:intergenic 20.0%
!!! TCATTTTTAAGTGTTTGTTT+AGG + chr5_4:51996857-51996876 Msa0856980:intron 20.0%
!! ATTAACACACTTCAAAAAAA+GGG - chr5_4:51997357-51997376 None:intergenic 20.0%
!! AATTAACACACTTCAAAAAA+AGG - chr5_4:51997358-51997377 None:intergenic 20.0%
!!! GTTTTTAGAATTTTTTTTGG+AGG + chr5_4:51997715-51997734 Msa0856980:intron 20.0%
!! GGTTTATACTTATATAAAAG+AGG + chr5_4:51997805-51997824 Msa0856980:intron 20.0%
!!! AATAAATTGATTTTCAAGAC+GGG + chr5_4:51997829-51997848 Msa0856980:intron 20.0%
!!! GACAATATTTTTTTGTTTGA+TGG - chr5_4:51998099-51998118 None:intergenic 20.0%
!! TTTGAAAATGGTTATGAAAT+TGG + chr5_4:51998414-51998433 Msa0856980:intron 20.0%
!! CATGTAATTGAAATATGAAA+TGG + chr5_4:51998720-51998739 Msa0856980:intron 20.0%
!!! AAGGATATACAGTTTTATAT+AGG + chr5_4:51999190-51999209 Msa0856980:intron 20.0%
!!! ATAAAGATACAATTTTTACG+AGG + chr5_4:51999457-51999476 Msa0856980:intron 20.0%
!!! TAAAGATACAATTTTTACGA+GGG + chr5_4:51999458-51999477 Msa0856980:intron 20.0%
!! ATCATAACAGAATACAAATT+TGG + chr5_4:51999578-51999597 Msa0856980:intron 20.0%
!! TAAATACATATAGTAGCAAA+CGG - chr5_4:51994743-51994762 None:intergenic 20.0%
!!! TTCTTTTCTTTGTTATTTGT+GGG - chr5_4:52000061-52000080 None:intergenic 20.0%
!! ATAACAAAGAAAAGAAGAAA+CGG + chr5_4:51995454-51995473 Msa0856980:CDS 20.0%
!! ACATGAAAAGTAATTAGAAA+TGG - chr5_4:51995377-51995396 None:intergenic 20.0%
! AATGAGAAAGAGATTAAAGA+AGG - chr5_4:51993184-51993203 None:intergenic 25.0%
!!! AATGTCTTTTTCTAGTCTAT+TGG + chr5_4:51993319-51993338 Msa0856980:intron 25.0%
! TTCATATTCATTAATTGACG+TGG - chr5_4:51993455-51993474 None:intergenic 25.0%
! GTAAAACAACCTTATACTTT+CGG + chr5_4:51993518-51993537 Msa0856980:intron 25.0%
!!! AATGGAAGCTACATATTTTT+TGG - chr5_4:51993945-51993964 None:intergenic 25.0%
! CATATTCGAAAATTCATACA+AGG - chr5_4:51994021-51994040 None:intergenic 25.0%
!! TATAATTTTACTTGACTGGT+TGG + chr5_4:51994280-51994299 Msa0856980:intron 25.0%
! CATTAATTGAGATAAACTAG+TGG - chr5_4:51994441-51994460 None:intergenic 25.0%
!! CACTAGTTTATCTCAATTAA+TGG + chr5_4:51994439-51994458 Msa0856980:CDS 25.0%
! AAATACATATAGTAGCAAAC+AGG - chr5_4:51994742-51994761 None:intergenic 25.0%
! TGTATTTATTATCTGCACTA+TGG + chr5_4:51994755-51994774 Msa0856980:intron 25.0%
!! TTAGTAACTCAATGATTTGT+TGG + chr5_4:51994791-51994810 Msa0856980:intron 25.0%
!! ATTTGTTGGAAGAGTTTAAA+GGG + chr5_4:51994805-51994824 Msa0856980:intron 25.0%
!! ATCCAAATTTAGTTTAAAGG+TGG + chr5_4:51995022-51995041 Msa0856980:intron 25.0%
! AGAACAAAGAAAAGAAGAAA+CGG + chr5_4:51995119-51995138 Msa0856980:CDS 25.0%
! ATATAATATATTCCTCAAGC+AGG + chr5_4:51995168-51995187 Msa0856980:CDS 25.0%
!!! TTCTTTTCTTTGTTATTGGT+GGG - chr5_4:51995450-51995469 None:intergenic 25.0%
! AAAGAAAAGAAGAAACATAG+AGG + chr5_4:51995459-51995478 Msa0856980:CDS 25.0%
! ACATGAAATGTAATTACAAG+TGG - chr5_4:51995712-51995731 None:intergenic 25.0%
!! ACTTTGAGTTACAAAAAAAC+GGG - chr5_4:51996085-51996104 None:intergenic 25.0%
!! AATGCAAAATTTTATTGGCA+TGG + chr5_4:51996313-51996332 Msa0856980:intron 25.0%
!! ATGTTATTCTAGAAAACAGA+TGG + chr5_4:51996415-51996434 Msa0856980:intron 25.0%
!! TGTTATTCTAGAAAACAGAT+GGG + chr5_4:51996416-51996435 Msa0856980:intron 25.0%
! ATTTGGAAAATGAAACTGAT+AGG + chr5_4:51996497-51996516 Msa0856980:intron 25.0%
!! AAGTTGATTCACATTATTGA+TGG + chr5_4:51996559-51996578 Msa0856980:intron 25.0%
! TACACAGATAAAAAGAAAAG+TGG - chr5_4:51996601-51996620 None:intergenic 25.0%
!! GAAAAAAATCTGAAACAAAC+AGG - chr5_4:51996817-51996836 None:intergenic 25.0%
!! CCTAATAGCTTTTCATTTTA+GGG - chr5_4:51996924-51996943 None:intergenic 25.0%
!! TCCTAATAGCTTTTCATTTT+AGG - chr5_4:51996925-51996944 None:intergenic 25.0%
! GTTGTACTCTAAATATTAGA+AGG + chr5_4:51997625-51997644 Msa0856980:intron 25.0%
! TACTCTAAATATTAGAAGGT+TGG + chr5_4:51997629-51997648 Msa0856980:intron 25.0%
! AGTGAAATGATGTAAGATTT+CGG + chr5_4:51997784-51997803 Msa0856980:intron 25.0%
!! TTTTTCCCAATTTCAAAACA+TGG - chr5_4:51997907-51997926 None:intergenic 25.0%
! TCAAATTTAGGAAACATGTT+TGG - chr5_4:51998134-51998153 None:intergenic 25.0%
! TTAGTGCATGTTTCAAATTT+AGG - chr5_4:51998146-51998165 None:intergenic 25.0%
!! TAGCACACTTTTGATAAATT+TGG + chr5_4:51998174-51998193 Msa0856980:intron 25.0%
!! TGTTAATGTCTTTTACAGTT+TGG + chr5_4:51998224-51998243 Msa0856980:intron 25.0%
!! GTTAATGTCTTTTACAGTTT+GGG + chr5_4:51998225-51998244 Msa0856980:intron 25.0%
!!! GAAAAAACCACTTTTGAAAA+TGG + chr5_4:51998402-51998421 Msa0856980:intron 25.0%
!! TTCATAACCATTTTCAAAAG+TGG - chr5_4:51998412-51998431 None:intergenic 25.0%
! TAAAAATAAGCTCCAAATCA+GGG - chr5_4:51998582-51998601 None:intergenic 25.0%
!!! TTTTAGAGTTTTGCCTATAA+AGG + chr5_4:51998597-51998616 Msa0856980:intron 25.0%
! ATTGACAAAAAAAAAAAGCG+TGG + chr5_4:51998777-51998796 Msa0856980:intron 25.0%
!!! TTATTGGTTTATAATTGCTG+TGG - chr5_4:51998852-51998871 None:intergenic 25.0%
!!! GATTTGTTGAAAGAGTTTAA+CGG + chr5_4:51999722-51999741 Msa0856980:intron 25.0%
!! ATTTGTTGAAAGAGTTTAAC+GGG + chr5_4:51999723-51999742 Msa0856980:intron 25.0%
! ATCAAAATCTGCAAAGAAAT+TGG - chr5_4:51999810-51999829 None:intergenic 25.0%
!!! AGCTACTTTTAATCTGAATT+TGG - chr5_4:51999945-51999964 None:intergenic 25.0%
!!! CTTCTTTTCTTTGTTATTTG+TGG - chr5_4:52000062-52000081 None:intergenic 25.0%
! ATATAATATATTCCTCAAGC+AGG + chr5_4:51995168-51995187 Msa0856980:CDS 25.0%
! AATGAGAAAGAGATTAAAGA+AGG - chr5_4:51993184-51993203 None:intergenic 25.0%
!!! AATGTCTTTTTCTAGTCTAT+TGG + chr5_4:51993319-51993338 Msa0856980:intron 25.0%
! TTCATATTCATTAATTGACG+TGG - chr5_4:51993455-51993474 None:intergenic 25.0%
! GTAAAACAACCTTATACTTT+CGG + chr5_4:51993518-51993537 Msa0856980:intron 25.0%
!!! AATGGAAGCTACATATTTTT+TGG - chr5_4:51993945-51993964 None:intergenic 25.0%
! CATATTCGAAAATTCATACA+AGG - chr5_4:51994021-51994040 None:intergenic 25.0%
!! TATAATTTTACTTGACTGGT+TGG + chr5_4:51994280-51994299 Msa0856980:intron 25.0%
! CATTAATTGAGATAAACTAG+TGG - chr5_4:51994441-51994460 None:intergenic 25.0%
!! CACTAGTTTATCTCAATTAA+TGG + chr5_4:51994439-51994458 Msa0856980:CDS 25.0%
! AAATACATATAGTAGCAAAC+AGG - chr5_4:51994742-51994761 None:intergenic 25.0%
! TGTATTTATTATCTGCACTA+TGG + chr5_4:51994755-51994774 Msa0856980:intron 25.0%
!! TTAGTAACTCAATGATTTGT+TGG + chr5_4:51994791-51994810 Msa0856980:intron 25.0%
!! ATTTGTTGGAAGAGTTTAAA+GGG + chr5_4:51994805-51994824 Msa0856980:intron 25.0%
!! ATCCAAATTTAGTTTAAAGG+TGG + chr5_4:51995022-51995041 Msa0856980:intron 25.0%
! AGAACAAAGAAAAGAAGAAA+CGG + chr5_4:51995119-51995138 Msa0856980:CDS 25.0%
! ATATAATATATTCCTCAAGC+AGG + chr5_4:51995168-51995187 Msa0856980:CDS 25.0%
!!! TTCTTTTCTTTGTTATTGGT+GGG - chr5_4:51995450-51995469 None:intergenic 25.0%
! AAAGAAAAGAAGAAACATAG+AGG + chr5_4:51995459-51995478 Msa0856980:CDS 25.0%
! ACATGAAATGTAATTACAAG+TGG - chr5_4:51995712-51995731 None:intergenic 25.0%
!! ACTTTGAGTTACAAAAAAAC+GGG - chr5_4:51996085-51996104 None:intergenic 25.0%
!! AATGCAAAATTTTATTGGCA+TGG + chr5_4:51996313-51996332 Msa0856980:intron 25.0%
!! ATGTTATTCTAGAAAACAGA+TGG + chr5_4:51996415-51996434 Msa0856980:intron 25.0%
!! TGTTATTCTAGAAAACAGAT+GGG + chr5_4:51996416-51996435 Msa0856980:intron 25.0%
! ATTTGGAAAATGAAACTGAT+AGG + chr5_4:51996497-51996516 Msa0856980:intron 25.0%
!! AAGTTGATTCACATTATTGA+TGG + chr5_4:51996559-51996578 Msa0856980:intron 25.0%
! TACACAGATAAAAAGAAAAG+TGG - chr5_4:51996601-51996620 None:intergenic 25.0%
!! GAAAAAAATCTGAAACAAAC+AGG - chr5_4:51996817-51996836 None:intergenic 25.0%
!! CCTAATAGCTTTTCATTTTA+GGG - chr5_4:51996924-51996943 None:intergenic 25.0%
!! TCCTAATAGCTTTTCATTTT+AGG - chr5_4:51996925-51996944 None:intergenic 25.0%
! GTTGTACTCTAAATATTAGA+AGG + chr5_4:51997625-51997644 Msa0856980:intron 25.0%
! TACTCTAAATATTAGAAGGT+TGG + chr5_4:51997629-51997648 Msa0856980:intron 25.0%
! AGTGAAATGATGTAAGATTT+CGG + chr5_4:51997784-51997803 Msa0856980:intron 25.0%
!! TTTTTCCCAATTTCAAAACA+TGG - chr5_4:51997907-51997926 None:intergenic 25.0%
! TCAAATTTAGGAAACATGTT+TGG - chr5_4:51998134-51998153 None:intergenic 25.0%
! TTAGTGCATGTTTCAAATTT+AGG - chr5_4:51998146-51998165 None:intergenic 25.0%
!! TAGCACACTTTTGATAAATT+TGG + chr5_4:51998174-51998193 Msa0856980:intron 25.0%
!! TGTTAATGTCTTTTACAGTT+TGG + chr5_4:51998224-51998243 Msa0856980:intron 25.0%
!! GTTAATGTCTTTTACAGTTT+GGG + chr5_4:51998225-51998244 Msa0856980:intron 25.0%
!!! GAAAAAACCACTTTTGAAAA+TGG + chr5_4:51998402-51998421 Msa0856980:intron 25.0%
!! TTCATAACCATTTTCAAAAG+TGG - chr5_4:51998412-51998431 None:intergenic 25.0%
! TAAAAATAAGCTCCAAATCA+GGG - chr5_4:51998582-51998601 None:intergenic 25.0%
!!! TTTTAGAGTTTTGCCTATAA+AGG + chr5_4:51998597-51998616 Msa0856980:intron 25.0%
! ATTGACAAAAAAAAAAAGCG+TGG + chr5_4:51998777-51998796 Msa0856980:intron 25.0%
!!! TTATTGGTTTATAATTGCTG+TGG - chr5_4:51998852-51998871 None:intergenic 25.0%
!!! GATTTGTTGAAAGAGTTTAA+CGG + chr5_4:51999722-51999741 Msa0856980:intron 25.0%
!! ATTTGTTGAAAGAGTTTAAC+GGG + chr5_4:51999723-51999742 Msa0856980:intron 25.0%
! ATCAAAATCTGCAAAGAAAT+TGG - chr5_4:51999810-51999829 None:intergenic 25.0%
!!! AGCTACTTTTAATCTGAATT+TGG - chr5_4:51999945-51999964 None:intergenic 25.0%
!!! CTTCTTTTCTTTGTTATTTG+TGG - chr5_4:52000062-52000081 None:intergenic 25.0%
! ATATAATATATTCCTCAAGC+AGG + chr5_4:51995168-51995187 Msa0856980:CDS 25.0%
GAACATGCAAACGAAAAAAA+TGG - chr5_4:51993218-51993237 None:intergenic 30.0%
TAAAGAGAATGACATGCAAA+CGG - chr5_4:51993261-51993280 None:intergenic 30.0%
GTCATATTCATTAATTGACG+TGG + chr5_4:51993485-51993504 Msa0856980:intron 30.0%
CCAAATAGAATTGGAAAAAG+AGG - chr5_4:51993612-51993631 None:intergenic 30.0%
! CCTCTTTTTCCAATTCTATT+TGG + chr5_4:51993609-51993628 Msa0856980:intron 30.0%
TCAAATCTGCCAAATAGAAT+TGG - chr5_4:51993621-51993640 None:intergenic 30.0%
TTATCACCAGGTATATTGTT+TGG + chr5_4:51993701-51993720 Msa0856980:intron 30.0%
! TCTAGCAAAAAAGTTAGTCT+CGG + chr5_4:51993829-51993848 Msa0856980:intron 30.0%
! AGGTTGATCAAGAAAAGAAA+TGG + chr5_4:51994071-51994090 Msa0856980:intron 30.0%
GGTTGATCAAGAAAAGAAAT+GGG + chr5_4:51994072-51994091 Msa0856980:intron 30.0%
GTTGATCAAGAAAAGAAATG+GGG + chr5_4:51994073-51994092 Msa0856980:CDS 30.0%
!!! CTTTTCAAGTTGATCACATA+AGG - chr5_4:51994140-51994159 None:intergenic 30.0%
CACAATTGATCAATTCACTA+TGG + chr5_4:51994683-51994702 Msa0856980:intron 30.0%
! ATATAGTAGCAAACAGGTTT+TGG - chr5_4:51994736-51994755 None:intergenic 30.0%
!! GATTTGTTGGAAGAGTTTAA+AGG + chr5_4:51994804-51994823 Msa0856980:intron 30.0%
TCAAAATCTGCAAAGAAATC+TGG - chr5_4:51994892-51994911 None:intergenic 30.0%
AGCCACCTTTAAACTAAATT+TGG - chr5_4:51995027-51995046 None:intergenic 30.0%
TGGATATCAAGAATTTCAAG+TGG + chr5_4:51995078-51995097 Msa0856980:intron 30.0%
! TTCTTTTCTTTGTTCTTTGC+GGG - chr5_4:51995115-51995134 None:intergenic 30.0%
! CTTCTTTTCTTTGTTCTTTG+CGG - chr5_4:51995116-51995135 None:intergenic 30.0%
TGGAAGAAAAATCATAGAGA+TGG + chr5_4:51995228-51995247 Msa0856980:CDS 30.0%
!!! CTTCTTTTCTTTGTTATTGG+TGG - chr5_4:51995451-51995470 None:intergenic 30.0%
AAAGCTGATCATCAGTTTAA+AGG + chr5_4:51995543-51995562 Msa0856980:CDS 30.0%
! TATCGTATCAGTTTTTCCAT+GGG - chr5_4:51995612-51995631 None:intergenic 30.0%
! TTATCGTATCAGTTTTTCCA+TGG - chr5_4:51995613-51995632 None:intergenic 30.0%
GATAATCATTCAAATCACCT+GGG - chr5_4:51995955-51995974 None:intergenic 30.0%
! GTTATTCTAGAAAACAGATG+GGG + chr5_4:51996417-51996436 Msa0856980:intron 30.0%
ATTTGGATGAAACCTGTATT+TGG + chr5_4:51996480-51996499 Msa0856980:intron 30.0%
! CAGTTTCATTTTCCAAATAC+AGG - chr5_4:51996495-51996514 None:intergenic 30.0%
AAAGTGGTATATACTTCAAG+AGG - chr5_4:51996585-51996604 None:intergenic 30.0%
! TTTTTATCTGTGTACACACA+AGG + chr5_4:51996607-51996626 Msa0856980:intron 30.0%
CCAACTCTCTTAGATATATA+GGG - chr5_4:51996738-51996757 None:intergenic 30.0%
TCCAACTCTCTTAGATATAT+AGG - chr5_4:51996739-51996758 None:intergenic 30.0%
CCCTAAAATGAAAAGCTATT+AGG + chr5_4:51996921-51996940 Msa0856980:intron 30.0%
! AGATTTTTATGGGTAGTAGT+AGG + chr5_4:51997044-51997063 Msa0856980:intron 30.0%
! AGAACTAGTGGACAATTAAA+GGG - chr5_4:51997159-51997178 None:intergenic 30.0%
! TAGAACTAGTGGACAATTAA+AGG - chr5_4:51997160-51997179 None:intergenic 30.0%
ATGATATTGAGCTTAAGTCT+TGG - chr5_4:51997304-51997323 None:intergenic 30.0%
AGACTTAAGCTCAATATCAT+TGG + chr5_4:51997304-51997323 Msa0856980:intron 30.0%
! GTGTGTTAATTTGATCAAGA+AGG + chr5_4:51997367-51997386 Msa0856980:intron 30.0%
! TGTTAATTTGATCAAGAAGG+AGG + chr5_4:51997370-51997389 Msa0856980:intron 30.0%
CGGATAGATTATACAATGTA+TGG + chr5_4:51997519-51997538 Msa0856980:intron 30.0%
TACAATGTATGGATGAATCT+TGG + chr5_4:51997530-51997549 Msa0856980:intron 30.0%
! TATTAGAAGGTTGGCTAATA+AGG + chr5_4:51997638-51997657 Msa0856980:intron 30.0%
TCTTCAAGAAGTTAAGAATG+AGG + chr5_4:51997674-51997693 Msa0856980:intron 30.0%
!!! TTAGAATTTTTTTTGGAGGG+AGG + chr5_4:51997719-51997738 Msa0856980:intron 30.0%
!!! TAGAATTTTTTTTGGAGGGA+GGG + chr5_4:51997720-51997739 Msa0856980:intron 30.0%
!!! TCGTAACCATGTTTTGAAAT+TGG + chr5_4:51997898-51997917 Msa0856980:intron 30.0%
!!! CGTAACCATGTTTTGAAATT+GGG + chr5_4:51997899-51997918 Msa0856980:intron 30.0%
ATAGTGGTGTACAAAACAAA+AGG + chr5_4:51998015-51998034 Msa0856980:intron 30.0%
!! TTAGGAAACATGTTTGGTTT+TGG - chr5_4:51998128-51998147 None:intergenic 30.0%
ATGAAATTGGAGATTGAAGA+AGG + chr5_4:51998427-51998446 Msa0856980:intron 30.0%
AAAAATAAGCTCCAAATCAG+GGG - chr5_4:51998581-51998600 None:intergenic 30.0%
CTAAAAATAAGCTCCAAATC+AGG - chr5_4:51998583-51998602 None:intergenic 30.0%
! AGTTTTGCCTATAAAGGAAA+GGG + chr5_4:51998603-51998622 Msa0856980:intron 30.0%
TTAGATTCCCTTTCCTTTAT+AGG - chr5_4:51998613-51998632 None:intergenic 30.0%
TGAGAGCAACTAAAAATTTG+TGG - chr5_4:51998702-51998721 None:intergenic 30.0%
! ACAAAAAAAAAAAGCGTGGT+AGG + chr5_4:51998781-51998800 Msa0856980:intron 30.0%
CACTTCAAATTAAATACCCA+GGG - chr5_4:51999026-51999045 None:intergenic 30.0%
ACACTTCAAATTAAATACCC+AGG - chr5_4:51999027-51999046 None:intergenic 30.0%
!! GGGTATTTAATTTGAAGTGT+CGG + chr5_4:51999027-51999046 Msa0856980:intron 30.0%
!! TTTGAAGTGTCGGTTTATAT+AGG + chr5_4:51999037-51999056 Msa0856980:intron 30.0%
ATCAAATTCTTCTACCTGTT+AGG + chr5_4:51999072-51999091 Msa0856980:intron 30.0%
ACCTTAAATTCTCCTTTCTA+AGG + chr5_4:51999322-51999341 Msa0856980:intron 30.0%
ACCTTAGAAAGGAGAATTTA+AGG - chr5_4:51999326-51999345 None:intergenic 30.0%
CCACTAATTGAGATAAACTA+AGG - chr5_4:51999374-51999393 None:intergenic 30.0%
CCTTAGTTTATCTCAATTAG+TGG + chr5_4:51999371-51999390 Msa0856980:intron 30.0%
AATTTGATTAGAGTAGTCCT+CGG - chr5_4:51999430-51999449 None:intergenic 30.0%
GACTACTCTAATCAAATTAC+TGG + chr5_4:51999432-51999451 Msa0856980:intron 30.0%
! TAAAACACGAGTTTGAAGTA+TGG + chr5_4:51999845-51999864 Msa0856980:intron 30.0%
TTTGGATTCTTACTTAAAGC+AGG + chr5_4:51999998-52000017 Msa0856980:intron 30.0%
AACAGGTACAGTAAATGAAT+TGG + chr5_4:51995287-51995306 Msa0856980:intron 30.0%
TTTCATGTAGCCATATGAAA+AGG + chr5_4:52000335-52000354 Msa0856980:intron 30.0%
ACAAAAGAGTAGTTTGATAG+AGG - chr5_4:52000488-52000507 None:intergenic 30.0%
!! TTAATGACTAGACTTGTTGT+TGG + chr5_4:52000626-52000645 Msa0856980:CDS 30.0%
!! TAATGACTAGACTTGTTGTT+GGG + chr5_4:52000627-52000646 Msa0856980:CDS 30.0%
GAACATGCAAACGAAAAAAA+TGG - chr5_4:51993218-51993237 None:intergenic 30.0%
TAAAGAGAATGACATGCAAA+CGG - chr5_4:51993261-51993280 None:intergenic 30.0%
GTCATATTCATTAATTGACG+TGG + chr5_4:51993485-51993504 Msa0856980:intron 30.0%
CCAAATAGAATTGGAAAAAG+AGG - chr5_4:51993612-51993631 None:intergenic 30.0%
! CCTCTTTTTCCAATTCTATT+TGG + chr5_4:51993609-51993628 Msa0856980:intron 30.0%
TCAAATCTGCCAAATAGAAT+TGG - chr5_4:51993621-51993640 None:intergenic 30.0%
TTATCACCAGGTATATTGTT+TGG + chr5_4:51993701-51993720 Msa0856980:intron 30.0%
! TCTAGCAAAAAAGTTAGTCT+CGG + chr5_4:51993829-51993848 Msa0856980:intron 30.0%
! AGGTTGATCAAGAAAAGAAA+TGG + chr5_4:51994071-51994090 Msa0856980:intron 30.0%
GGTTGATCAAGAAAAGAAAT+GGG + chr5_4:51994072-51994091 Msa0856980:intron 30.0%
GTTGATCAAGAAAAGAAATG+GGG + chr5_4:51994073-51994092 Msa0856980:CDS 30.0%
!!! CTTTTCAAGTTGATCACATA+AGG - chr5_4:51994140-51994159 None:intergenic 30.0%
CACAATTGATCAATTCACTA+TGG + chr5_4:51994683-51994702 Msa0856980:intron 30.0%
! ATATAGTAGCAAACAGGTTT+TGG - chr5_4:51994736-51994755 None:intergenic 30.0%
!! GATTTGTTGGAAGAGTTTAA+AGG + chr5_4:51994804-51994823 Msa0856980:intron 30.0%
TCAAAATCTGCAAAGAAATC+TGG - chr5_4:51994892-51994911 None:intergenic 30.0%
AGCCACCTTTAAACTAAATT+TGG - chr5_4:51995027-51995046 None:intergenic 30.0%
TGGATATCAAGAATTTCAAG+TGG + chr5_4:51995078-51995097 Msa0856980:intron 30.0%
! TTCTTTTCTTTGTTCTTTGC+GGG - chr5_4:51995115-51995134 None:intergenic 30.0%
! CTTCTTTTCTTTGTTCTTTG+CGG - chr5_4:51995116-51995135 None:intergenic 30.0%
TGGAAGAAAAATCATAGAGA+TGG + chr5_4:51995228-51995247 Msa0856980:CDS 30.0%
!!! CTTCTTTTCTTTGTTATTGG+TGG - chr5_4:51995451-51995470 None:intergenic 30.0%
AAAGCTGATCATCAGTTTAA+AGG + chr5_4:51995543-51995562 Msa0856980:CDS 30.0%
! TATCGTATCAGTTTTTCCAT+GGG - chr5_4:51995612-51995631 None:intergenic 30.0%
! TTATCGTATCAGTTTTTCCA+TGG - chr5_4:51995613-51995632 None:intergenic 30.0%
GATAATCATTCAAATCACCT+GGG - chr5_4:51995955-51995974 None:intergenic 30.0%
! GTTATTCTAGAAAACAGATG+GGG + chr5_4:51996417-51996436 Msa0856980:intron 30.0%
ATTTGGATGAAACCTGTATT+TGG + chr5_4:51996480-51996499 Msa0856980:intron 30.0%
! CAGTTTCATTTTCCAAATAC+AGG - chr5_4:51996495-51996514 None:intergenic 30.0%
AAAGTGGTATATACTTCAAG+AGG - chr5_4:51996585-51996604 None:intergenic 30.0%
! TTTTTATCTGTGTACACACA+AGG + chr5_4:51996607-51996626 Msa0856980:intron 30.0%
CCAACTCTCTTAGATATATA+GGG - chr5_4:51996738-51996757 None:intergenic 30.0%
TCCAACTCTCTTAGATATAT+AGG - chr5_4:51996739-51996758 None:intergenic 30.0%
CCCTAAAATGAAAAGCTATT+AGG + chr5_4:51996921-51996940 Msa0856980:intron 30.0%
! AGATTTTTATGGGTAGTAGT+AGG + chr5_4:51997044-51997063 Msa0856980:intron 30.0%
! AGAACTAGTGGACAATTAAA+GGG - chr5_4:51997159-51997178 None:intergenic 30.0%
! TAGAACTAGTGGACAATTAA+AGG - chr5_4:51997160-51997179 None:intergenic 30.0%
ATGATATTGAGCTTAAGTCT+TGG - chr5_4:51997304-51997323 None:intergenic 30.0%
AGACTTAAGCTCAATATCAT+TGG + chr5_4:51997304-51997323 Msa0856980:intron 30.0%
! GTGTGTTAATTTGATCAAGA+AGG + chr5_4:51997367-51997386 Msa0856980:intron 30.0%
! TGTTAATTTGATCAAGAAGG+AGG + chr5_4:51997370-51997389 Msa0856980:intron 30.0%
CGGATAGATTATACAATGTA+TGG + chr5_4:51997519-51997538 Msa0856980:intron 30.0%
TACAATGTATGGATGAATCT+TGG + chr5_4:51997530-51997549 Msa0856980:intron 30.0%
! TATTAGAAGGTTGGCTAATA+AGG + chr5_4:51997638-51997657 Msa0856980:intron 30.0%
TCTTCAAGAAGTTAAGAATG+AGG + chr5_4:51997674-51997693 Msa0856980:intron 30.0%
!!! TTAGAATTTTTTTTGGAGGG+AGG + chr5_4:51997719-51997738 Msa0856980:intron 30.0%
!!! TAGAATTTTTTTTGGAGGGA+GGG + chr5_4:51997720-51997739 Msa0856980:intron 30.0%
!!! TCGTAACCATGTTTTGAAAT+TGG + chr5_4:51997898-51997917 Msa0856980:intron 30.0%
!!! CGTAACCATGTTTTGAAATT+GGG + chr5_4:51997899-51997918 Msa0856980:intron 30.0%
ATAGTGGTGTACAAAACAAA+AGG + chr5_4:51998015-51998034 Msa0856980:intron 30.0%
!! TTAGGAAACATGTTTGGTTT+TGG - chr5_4:51998128-51998147 None:intergenic 30.0%
ATGAAATTGGAGATTGAAGA+AGG + chr5_4:51998427-51998446 Msa0856980:intron 30.0%
AAAAATAAGCTCCAAATCAG+GGG - chr5_4:51998581-51998600 None:intergenic 30.0%
CTAAAAATAAGCTCCAAATC+AGG - chr5_4:51998583-51998602 None:intergenic 30.0%
! AGTTTTGCCTATAAAGGAAA+GGG + chr5_4:51998603-51998622 Msa0856980:intron 30.0%
TTAGATTCCCTTTCCTTTAT+AGG - chr5_4:51998613-51998632 None:intergenic 30.0%
TGAGAGCAACTAAAAATTTG+TGG - chr5_4:51998702-51998721 None:intergenic 30.0%
! ACAAAAAAAAAAAGCGTGGT+AGG + chr5_4:51998781-51998800 Msa0856980:intron 30.0%
CACTTCAAATTAAATACCCA+GGG - chr5_4:51999026-51999045 None:intergenic 30.0%
ACACTTCAAATTAAATACCC+AGG - chr5_4:51999027-51999046 None:intergenic 30.0%
!! GGGTATTTAATTTGAAGTGT+CGG + chr5_4:51999027-51999046 Msa0856980:intron 30.0%
!! TTTGAAGTGTCGGTTTATAT+AGG + chr5_4:51999037-51999056 Msa0856980:intron 30.0%
ATCAAATTCTTCTACCTGTT+AGG + chr5_4:51999072-51999091 Msa0856980:intron 30.0%
ACCTTAAATTCTCCTTTCTA+AGG + chr5_4:51999322-51999341 Msa0856980:intron 30.0%
ACCTTAGAAAGGAGAATTTA+AGG - chr5_4:51999326-51999345 None:intergenic 30.0%
CCACTAATTGAGATAAACTA+AGG - chr5_4:51999374-51999393 None:intergenic 30.0%
CCTTAGTTTATCTCAATTAG+TGG + chr5_4:51999371-51999390 Msa0856980:intron 30.0%
AATTTGATTAGAGTAGTCCT+CGG - chr5_4:51999430-51999449 None:intergenic 30.0%
GACTACTCTAATCAAATTAC+TGG + chr5_4:51999432-51999451 Msa0856980:intron 30.0%
! TAAAACACGAGTTTGAAGTA+TGG + chr5_4:51999845-51999864 Msa0856980:intron 30.0%
TTTGGATTCTTACTTAAAGC+AGG + chr5_4:51999998-52000017 Msa0856980:intron 30.0%
AACAGGTACAGTAAATGAAT+TGG + chr5_4:51995287-51995306 Msa0856980:intron 30.0%
TTTCATGTAGCCATATGAAA+AGG + chr5_4:52000335-52000354 Msa0856980:intron 30.0%
ACAAAAGAGTAGTTTGATAG+AGG - chr5_4:52000488-52000507 None:intergenic 30.0%
!! TTAATGACTAGACTTGTTGT+TGG + chr5_4:52000626-52000645 Msa0856980:CDS 30.0%
!! TAATGACTAGACTTGTTGTT+GGG + chr5_4:52000627-52000646 Msa0856980:CDS 30.0%
AGGAAAGGAATTAGTAGTGA+TGG + chr5_4:51992989-51993008 Msa0856980:CDS 35.0%
TTCATCAATGGAAGAAGCAA+AGG + chr5_4:51993046-51993065 Msa0856980:CDS 35.0%
AGAAGCAAAGGAATTAGAGA+TGG + chr5_4:51993058-51993077 Msa0856980:CDS 35.0%
CTCTCAGTGAGGATATAATA+TGG - chr5_4:51993092-51993111 None:intergenic 35.0%
ACATGAGATTGAATCCAGAA+GGG - chr5_4:51993145-51993164 None:intergenic 35.0%
AACATGAGATTGAATCCAGA+AGG - chr5_4:51993146-51993165 None:intergenic 35.0%
! TTCGTTTGCATGTTCTGTTT+TGG + chr5_4:51993223-51993242 Msa0856980:intron 35.0%
! TAGCATACACCGAAAGTATA+AGG - chr5_4:51993530-51993549 None:intergenic 35.0%
GTAAAACAGGTACAAGTCAA+GGG - chr5_4:51993658-51993677 None:intergenic 35.0%
AGTAAAACAGGTACAAGTCA+AGG - chr5_4:51993659-51993678 None:intergenic 35.0%
!! TGACTTGTACCTGTTTTACT+TGG + chr5_4:51993659-51993678 Msa0856980:intron 35.0%
GGATAACCAAACAATATACC+TGG - chr5_4:51993710-51993729 None:intergenic 35.0%
ACAATACCATGTCAACAATG+TGG - chr5_4:51993731-51993750 None:intergenic 35.0%
TATGTAGCTTCTAACCAACA+AGG + chr5_4:51993800-51993819 Msa0856980:intron 35.0%
TTGCTAGATTCAAACCTTGT+TGG - chr5_4:51993817-51993836 None:intergenic 35.0%
!!! TTTTTTGGTTTCCCACATAC+AGG - chr5_4:51993930-51993949 None:intergenic 35.0%
!! AGTTGTTTCTGCTCTAAAAC+TGG + chr5_4:51994099-51994118 Msa0856980:CDS 35.0%
TTGAGACATTGTACTTCTAC+AGG + chr5_4:51994185-51994204 Msa0856980:CDS 35.0%
CTTTATAAGGTCCAGTTGAA+AGG + chr5_4:51994402-51994421 Msa0856980:intron 35.0%
!!! GAGTTTTGATTCCTTTCAAC+TGG - chr5_4:51994416-51994435 None:intergenic 35.0%
AATTTGACTAGAGTAGTCCT+CGG - chr5_4:51994498-51994517 None:intergenic 35.0%
GACTACTCTAGTCAAATTAC+AGG + chr5_4:51994500-51994519 Msa0856980:CDS 35.0%
GATCAATTCACTATGGTCTA+TGG + chr5_4:51994690-51994709 Msa0856980:intron 35.0%
TGGAAGAGTTTAAAGGGATT+TGG + chr5_4:51994811-51994830 Msa0856980:intron 35.0%
!! ACCAACGATATGGTTGATTT+TGG - chr5_4:51994848-51994867 None:intergenic 35.0%
AAAATCAACCATATCGTTGG+TGG + chr5_4:51994847-51994866 Msa0856980:intron 35.0%
AAAGAAAAGAAGAAACGGAG+AGG + chr5_4:51995124-51995143 Msa0856980:CDS 35.0%
TTATATCCACTCTGTCCTAT+TGG - chr5_4:51995154-51995173 None:intergenic 35.0%
TCGACTTAAAGCTTATCATC+AGG + chr5_4:51995198-51995217 Msa0856980:CDS 35.0%
TTGGAATAAGTTGTCAGACA+AGG + chr5_4:51995261-51995280 Msa0856980:CDS 35.0%
TTTCATGTAGCCATATGAAG+AGG + chr5_4:51995389-51995408 Msa0856980:intron 35.0%
TAAAGGTGACCGAAAAATCA+CGG + chr5_4:51995560-51995579 Msa0856980:intron 35.0%
! CATCAATAGCCGTGATTTTT+CGG - chr5_4:51995572-51995591 None:intergenic 35.0%
! ATCGTATCAGTTTTTCCATG+GGG - chr5_4:51995611-51995630 None:intergenic 35.0%
TTTCATGTAGCCATATGAAG+AGG + chr5_4:51995389-51995408 Msa0856980:intron 35.0%
TTCATGCTTTCCTCTTCATA+TGG - chr5_4:51995737-51995756 None:intergenic 35.0%
! AGAGGAAAGCATGAAGATAA+AGG + chr5_4:51995742-51995761 Msa0856980:intron 35.0%
TTCAAATCACCTGGGAAAAA+GGG - chr5_4:51995947-51995966 None:intergenic 35.0%
ATTCAAATCACCTGGGAAAA+AGG - chr5_4:51995948-51995967 None:intergenic 35.0%
CGATAATCATTCAAATCACC+TGG - chr5_4:51995956-51995975 None:intergenic 35.0%
!!! CTTAGCTGCTTTTGTGTTTA+TGG + chr5_4:51996108-51996127 Msa0856980:intron 35.0%
TTTGAAAGAGCAACAAGCAT+TGG + chr5_4:51996132-51996151 Msa0856980:intron 35.0%
! AATAGCAACAAGCATTGCTT+TGG + chr5_4:51996233-51996252 Msa0856980:intron 35.0%
GAAAATGAAACTGATAGGTC+TGG + chr5_4:51996502-51996521 Msa0856980:intron 35.0%
CCCTATATATCTAAGAGAGT+TGG + chr5_4:51996735-51996754 Msa0856980:intron 35.0%
GGAAATGTTAGTTCAAGTCT+TGG - chr5_4:51996783-51996802 None:intergenic 35.0%
AACTAACATTTCCACGACTT+TGG + chr5_4:51996790-51996809 Msa0856980:intron 35.0%
ACTAACATTTCCACGACTTT+GGG + chr5_4:51996791-51996810 Msa0856980:intron 35.0%
!! TCCACTAGTTCTAAATCAAC+CGG + chr5_4:51997167-51997186 Msa0856980:intron 35.0%
AATCAACCGGTAAAACTAGT+AGG + chr5_4:51997180-51997199 Msa0856980:intron 35.0%
! AGAATTTAGGATTCGAACTC+CGG - chr5_4:51997217-51997236 None:intergenic 35.0%
TACACACAAGTGGAGAATTT+AGG - chr5_4:51997230-51997249 None:intergenic 35.0%
TAGAAACTCATACACACAAG+TGG - chr5_4:51997240-51997259 None:intergenic 35.0%
!!! CTTTCTCGTCAACTTTTTCA+GGG - chr5_4:51997399-51997418 None:intergenic 35.0%
!! TCTTTCTCGTCAACTTTTTC+AGG - chr5_4:51997400-51997419 None:intergenic 35.0%
! CTTGTTATATAGAGCTGAAG+CGG + chr5_4:51997499-51997518 Msa0856980:intron 35.0%
! GTGTTACTAGCAATGAAGAA+AGG + chr5_4:51997552-51997571 Msa0856980:intron 35.0%
TGAAAAGCTGGATCAATGAT+TGG + chr5_4:51997603-51997622 Msa0856980:intron 35.0%
TCAAGAAGTTAAGAATGAGG+CGG + chr5_4:51997677-51997696 Msa0856980:intron 35.0%
!!! AGAATTTTTTTTGGAGGGAG+GGG + chr5_4:51997721-51997740 Msa0856980:intron 35.0%
!! ATTGATTTTCAAGACGGGTT+TGG + chr5_4:51997834-51997853 Msa0856980:intron 35.0%
!! TTGATTTTCAAGACGGGTTT+GGG + chr5_4:51997835-51997854 Msa0856980:intron 35.0%
AAACCCAAACTCGATTAAAG+CGG + chr5_4:51997924-51997943 Msa0856980:intron 35.0%
! AAAACCCGTTAAAATGGGTT+TGG + chr5_4:51997949-51997968 Msa0856980:intron 35.0%
! TCGAACCAAACCCATTTTAA+CGG - chr5_4:51997957-51997976 None:intergenic 35.0%
! TGTTTTGTACACCACTATCT+AGG - chr5_4:51998013-51998032 None:intergenic 35.0%
! GTGTTTAAAGTTAAGTGGTC+TGG - chr5_4:51998072-51998091 None:intergenic 35.0%
! CGTATATTTTGCAGTGTATG+GGG - chr5_4:51998258-51998277 None:intergenic 35.0%
! CCGTATATTTTGCAGTGTAT+GGG - chr5_4:51998259-51998278 None:intergenic 35.0%
CCCATACACTGCAAAATATA+CGG + chr5_4:51998256-51998275 Msa0856980:intron 35.0%
! ACCGTATATTTTGCAGTGTA+TGG - chr5_4:51998260-51998279 None:intergenic 35.0%
TTCTTCGTTGAATAAACCAC+CGG - chr5_4:51998526-51998545 None:intergenic 35.0%
GGTTTATTCAACGAAGAAGA+AGG + chr5_4:51998528-51998547 Msa0856980:CDS 35.0%
AAAATAAGCTCCAAATCAGG+GGG - chr5_4:51998580-51998599 None:intergenic 35.0%
! GAGTTTTGCCTATAAAGGAA+AGG + chr5_4:51998602-51998621 Msa0856980:intron 35.0%
ATATGTATGTGTTAGACCCT+GGG + chr5_4:51999007-51999026 Msa0856980:intron 35.0%
TGACACTCTAATAACCTAAC+AGG - chr5_4:51999089-51999108 None:intergenic 35.0%
AAAACTGTATATCCTTGCAG+TGG - chr5_4:51999186-51999205 None:intergenic 35.0%
!! AATTCTCCTTTCTAAGGTTC+AGG + chr5_4:51999328-51999347 Msa0856980:intron 35.0%
GGACAATGAAGATTATGCAA+AGG + chr5_4:51999392-51999411 Msa0856980:intron 35.0%
CAATGAAGATTATGCAAAGG+TGG + chr5_4:51999395-51999414 Msa0856980:intron 35.0%
AGTAACCAAAGTGAATCGAT+CGG - chr5_4:51999617-51999636 None:intergenic 35.0%
! CATATAGTAGCAAACGGTTT+TGG - chr5_4:51999655-51999674 None:intergenic 35.0%
TGAAAGAGTTTAACGGGATT+TGG + chr5_4:51999729-51999748 Msa0856980:intron 35.0%
ACCAAAATCAACCATATCGT+TGG + chr5_4:51999762-51999781 Msa0856980:intron 35.0%
!! ACCAACGATATGGTTGATTT+TGG - chr5_4:51994848-51994867 None:intergenic 35.0%
TTCTTACTTAAAGCAGGAGT+TGG + chr5_4:52000004-52000023 Msa0856980:intron 35.0%
TTATATCCACTCTGACCTAT+TGG - chr5_4:52000100-52000119 None:intergenic 35.0%
! TCCTTGCTTTCCTTTTCATA+TGG - chr5_4:52000348-52000367 None:intergenic 35.0%
AAAGGAAAGCAAGGAGATAA+AGG + chr5_4:52000353-52000372 Msa0856980:intron 35.0%
TGAAGAGTGAAGATCTTAAG+AGG + chr5_4:52000411-52000430 Msa0856980:CDS 35.0%
GAAGAGTGAAGATCTTAAGA+GGG + chr5_4:52000412-52000431 Msa0856980:CDS 35.0%
TTCAAATCACCTGGGAAAAA+GGG - chr5_4:51995947-51995966 None:intergenic 35.0%
ATTCAAATCACCTGGGAAAA+AGG - chr5_4:51995948-51995967 None:intergenic 35.0%
TGATTTGAATGCTTGTCGTT+CGG + chr5_4:52000577-52000596 Msa0856980:CDS 35.0%
AGGAAAGGAATTAGTAGTGA+TGG + chr5_4:51992989-51993008 Msa0856980:CDS 35.0%
TTCATCAATGGAAGAAGCAA+AGG + chr5_4:51993046-51993065 Msa0856980:CDS 35.0%
AGAAGCAAAGGAATTAGAGA+TGG + chr5_4:51993058-51993077 Msa0856980:CDS 35.0%
CTCTCAGTGAGGATATAATA+TGG - chr5_4:51993092-51993111 None:intergenic 35.0%
ACATGAGATTGAATCCAGAA+GGG - chr5_4:51993145-51993164 None:intergenic 35.0%
AACATGAGATTGAATCCAGA+AGG - chr5_4:51993146-51993165 None:intergenic 35.0%
! TTCGTTTGCATGTTCTGTTT+TGG + chr5_4:51993223-51993242 Msa0856980:intron 35.0%
! TAGCATACACCGAAAGTATA+AGG - chr5_4:51993530-51993549 None:intergenic 35.0%
GTAAAACAGGTACAAGTCAA+GGG - chr5_4:51993658-51993677 None:intergenic 35.0%
AGTAAAACAGGTACAAGTCA+AGG - chr5_4:51993659-51993678 None:intergenic 35.0%
!! TGACTTGTACCTGTTTTACT+TGG + chr5_4:51993659-51993678 Msa0856980:intron 35.0%
GGATAACCAAACAATATACC+TGG - chr5_4:51993710-51993729 None:intergenic 35.0%
ACAATACCATGTCAACAATG+TGG - chr5_4:51993731-51993750 None:intergenic 35.0%
TATGTAGCTTCTAACCAACA+AGG + chr5_4:51993800-51993819 Msa0856980:intron 35.0%
TTGCTAGATTCAAACCTTGT+TGG - chr5_4:51993817-51993836 None:intergenic 35.0%
!!! TTTTTTGGTTTCCCACATAC+AGG - chr5_4:51993930-51993949 None:intergenic 35.0%
!! AGTTGTTTCTGCTCTAAAAC+TGG + chr5_4:51994099-51994118 Msa0856980:CDS 35.0%
TTGAGACATTGTACTTCTAC+AGG + chr5_4:51994185-51994204 Msa0856980:CDS 35.0%
CTTTATAAGGTCCAGTTGAA+AGG + chr5_4:51994402-51994421 Msa0856980:intron 35.0%
!!! GAGTTTTGATTCCTTTCAAC+TGG - chr5_4:51994416-51994435 None:intergenic 35.0%
AATTTGACTAGAGTAGTCCT+CGG - chr5_4:51994498-51994517 None:intergenic 35.0%
GACTACTCTAGTCAAATTAC+AGG + chr5_4:51994500-51994519 Msa0856980:CDS 35.0%
GATCAATTCACTATGGTCTA+TGG + chr5_4:51994690-51994709 Msa0856980:intron 35.0%
TGGAAGAGTTTAAAGGGATT+TGG + chr5_4:51994811-51994830 Msa0856980:intron 35.0%
!! ACCAACGATATGGTTGATTT+TGG - chr5_4:51994848-51994867 None:intergenic 35.0%
AAAATCAACCATATCGTTGG+TGG + chr5_4:51994847-51994866 Msa0856980:intron 35.0%
AAAGAAAAGAAGAAACGGAG+AGG + chr5_4:51995124-51995143 Msa0856980:CDS 35.0%
TTATATCCACTCTGTCCTAT+TGG - chr5_4:51995154-51995173 None:intergenic 35.0%
TCGACTTAAAGCTTATCATC+AGG + chr5_4:51995198-51995217 Msa0856980:CDS 35.0%
TTGGAATAAGTTGTCAGACA+AGG + chr5_4:51995261-51995280 Msa0856980:CDS 35.0%
TTTCATGTAGCCATATGAAG+AGG + chr5_4:51995389-51995408 Msa0856980:intron 35.0%
TAAAGGTGACCGAAAAATCA+CGG + chr5_4:51995560-51995579 Msa0856980:intron 35.0%
! CATCAATAGCCGTGATTTTT+CGG - chr5_4:51995572-51995591 None:intergenic 35.0%
! ATCGTATCAGTTTTTCCATG+GGG - chr5_4:51995611-51995630 None:intergenic 35.0%
TTTCATGTAGCCATATGAAG+AGG + chr5_4:51995389-51995408 Msa0856980:intron 35.0%
TTCATGCTTTCCTCTTCATA+TGG - chr5_4:51995737-51995756 None:intergenic 35.0%
! AGAGGAAAGCATGAAGATAA+AGG + chr5_4:51995742-51995761 Msa0856980:intron 35.0%
TTCAAATCACCTGGGAAAAA+GGG - chr5_4:51995947-51995966 None:intergenic 35.0%
ATTCAAATCACCTGGGAAAA+AGG - chr5_4:51995948-51995967 None:intergenic 35.0%
CGATAATCATTCAAATCACC+TGG - chr5_4:51995956-51995975 None:intergenic 35.0%
!!! CTTAGCTGCTTTTGTGTTTA+TGG + chr5_4:51996108-51996127 Msa0856980:intron 35.0%
TTTGAAAGAGCAACAAGCAT+TGG + chr5_4:51996132-51996151 Msa0856980:intron 35.0%
! AATAGCAACAAGCATTGCTT+TGG + chr5_4:51996233-51996252 Msa0856980:intron 35.0%
GAAAATGAAACTGATAGGTC+TGG + chr5_4:51996502-51996521 Msa0856980:intron 35.0%
CCCTATATATCTAAGAGAGT+TGG + chr5_4:51996735-51996754 Msa0856980:intron 35.0%
GGAAATGTTAGTTCAAGTCT+TGG - chr5_4:51996783-51996802 None:intergenic 35.0%
AACTAACATTTCCACGACTT+TGG + chr5_4:51996790-51996809 Msa0856980:intron 35.0%
ACTAACATTTCCACGACTTT+GGG + chr5_4:51996791-51996810 Msa0856980:intron 35.0%
!! TCCACTAGTTCTAAATCAAC+CGG + chr5_4:51997167-51997186 Msa0856980:intron 35.0%
AATCAACCGGTAAAACTAGT+AGG + chr5_4:51997180-51997199 Msa0856980:intron 35.0%
! AGAATTTAGGATTCGAACTC+CGG - chr5_4:51997217-51997236 None:intergenic 35.0%
TACACACAAGTGGAGAATTT+AGG - chr5_4:51997230-51997249 None:intergenic 35.0%
TAGAAACTCATACACACAAG+TGG - chr5_4:51997240-51997259 None:intergenic 35.0%
!!! CTTTCTCGTCAACTTTTTCA+GGG - chr5_4:51997399-51997418 None:intergenic 35.0%
!! TCTTTCTCGTCAACTTTTTC+AGG - chr5_4:51997400-51997419 None:intergenic 35.0%
! CTTGTTATATAGAGCTGAAG+CGG + chr5_4:51997499-51997518 Msa0856980:intron 35.0%
! GTGTTACTAGCAATGAAGAA+AGG + chr5_4:51997552-51997571 Msa0856980:intron 35.0%
TGAAAAGCTGGATCAATGAT+TGG + chr5_4:51997603-51997622 Msa0856980:intron 35.0%
TCAAGAAGTTAAGAATGAGG+CGG + chr5_4:51997677-51997696 Msa0856980:intron 35.0%
!!! AGAATTTTTTTTGGAGGGAG+GGG + chr5_4:51997721-51997740 Msa0856980:intron 35.0%
!! ATTGATTTTCAAGACGGGTT+TGG + chr5_4:51997834-51997853 Msa0856980:intron 35.0%
!! TTGATTTTCAAGACGGGTTT+GGG + chr5_4:51997835-51997854 Msa0856980:intron 35.0%
AAACCCAAACTCGATTAAAG+CGG + chr5_4:51997924-51997943 Msa0856980:intron 35.0%
! AAAACCCGTTAAAATGGGTT+TGG + chr5_4:51997949-51997968 Msa0856980:intron 35.0%
! TCGAACCAAACCCATTTTAA+CGG - chr5_4:51997957-51997976 None:intergenic 35.0%
! TGTTTTGTACACCACTATCT+AGG - chr5_4:51998013-51998032 None:intergenic 35.0%
! GTGTTTAAAGTTAAGTGGTC+TGG - chr5_4:51998072-51998091 None:intergenic 35.0%
! CGTATATTTTGCAGTGTATG+GGG - chr5_4:51998258-51998277 None:intergenic 35.0%
! CCGTATATTTTGCAGTGTAT+GGG - chr5_4:51998259-51998278 None:intergenic 35.0%
CCCATACACTGCAAAATATA+CGG + chr5_4:51998256-51998275 Msa0856980:intron 35.0%
! ACCGTATATTTTGCAGTGTA+TGG - chr5_4:51998260-51998279 None:intergenic 35.0%
TTCTTCGTTGAATAAACCAC+CGG - chr5_4:51998526-51998545 None:intergenic 35.0%
GGTTTATTCAACGAAGAAGA+AGG + chr5_4:51998528-51998547 Msa0856980:CDS 35.0%
AAAATAAGCTCCAAATCAGG+GGG - chr5_4:51998580-51998599 None:intergenic 35.0%
! GAGTTTTGCCTATAAAGGAA+AGG + chr5_4:51998602-51998621 Msa0856980:intron 35.0%
ATATGTATGTGTTAGACCCT+GGG + chr5_4:51999007-51999026 Msa0856980:intron 35.0%
TGACACTCTAATAACCTAAC+AGG - chr5_4:51999089-51999108 None:intergenic 35.0%
AAAACTGTATATCCTTGCAG+TGG - chr5_4:51999186-51999205 None:intergenic 35.0%
!! AATTCTCCTTTCTAAGGTTC+AGG + chr5_4:51999328-51999347 Msa0856980:intron 35.0%
GGACAATGAAGATTATGCAA+AGG + chr5_4:51999392-51999411 Msa0856980:intron 35.0%
CAATGAAGATTATGCAAAGG+TGG + chr5_4:51999395-51999414 Msa0856980:intron 35.0%
AGTAACCAAAGTGAATCGAT+CGG - chr5_4:51999617-51999636 None:intergenic 35.0%
! CATATAGTAGCAAACGGTTT+TGG - chr5_4:51999655-51999674 None:intergenic 35.0%
TGAAAGAGTTTAACGGGATT+TGG + chr5_4:51999729-51999748 Msa0856980:intron 35.0%
ACCAAAATCAACCATATCGT+TGG + chr5_4:51999762-51999781 Msa0856980:intron 35.0%
!! ACCAACGATATGGTTGATTT+TGG - chr5_4:51994848-51994867 None:intergenic 35.0%
TTCTTACTTAAAGCAGGAGT+TGG + chr5_4:52000004-52000023 Msa0856980:intron 35.0%
TTATATCCACTCTGACCTAT+TGG - chr5_4:52000100-52000119 None:intergenic 35.0%
! TCCTTGCTTTCCTTTTCATA+TGG - chr5_4:52000348-52000367 None:intergenic 35.0%
AAAGGAAAGCAAGGAGATAA+AGG + chr5_4:52000353-52000372 Msa0856980:intron 35.0%
TGAAGAGTGAAGATCTTAAG+AGG + chr5_4:52000411-52000430 Msa0856980:CDS 35.0%
GAAGAGTGAAGATCTTAAGA+GGG + chr5_4:52000412-52000431 Msa0856980:CDS 35.0%
TTCAAATCACCTGGGAAAAA+GGG - chr5_4:51995947-51995966 None:intergenic 35.0%
ATTCAAATCACCTGGGAAAA+AGG - chr5_4:51995948-51995967 None:intergenic 35.0%
TGATTTGAATGCTTGTCGTT+CGG + chr5_4:52000577-52000596 Msa0856980:CDS 35.0%
! GGAATTAGTAGTGATGGAGA+TGG + chr5_4:51992995-51993014 Msa0856980:CDS 40.0%
! CTTGTACCTGTTTTACTTGG+AGG + chr5_4:51993662-51993681 Msa0856980:intron 40.0%
GGTTATCCACATTGTTGACA+TGG + chr5_4:51993722-51993741 Msa0856980:intron 40.0%
GCTACGTCGAAAACTAAATG+TGG - chr5_4:51993890-51993909 None:intergenic 40.0%
GGATAAGCTTGATCTGCAAA+TGG - chr5_4:51993963-51993982 None:intergenic 40.0%
TTCTCTTGAATGATTGCTGC+AGG + chr5_4:51994051-51994070 Msa0856980:intron 40.0%
!! GTTTCTGCTCTAAAACTGGA+AGG + chr5_4:51994103-51994122 Msa0856980:CDS 40.0%
TGGCAGCAATACAGGTTAAT+TGG + chr5_4:51994231-51994250 Msa0856980:intron 40.0%
GCCAAAATCAACCATATCGT+TGG + chr5_4:51994844-51994863 Msa0856980:intron 40.0%
CTTTCAAACCACCAACGATA+TGG - chr5_4:51994858-51994877 None:intergenic 40.0%
AAAGCTTATCATCAGGACGT+AGG + chr5_4:51995205-51995224 Msa0856980:CDS 40.0%
TAGAGATGGCTATTGATGCT+TGG + chr5_4:51995242-51995261 Msa0856980:CDS 40.0%
!! AGAAACATAGAGGTGTTCCA+AGG + chr5_4:51995469-51995488 Msa0856980:CDS 40.0%
!! GAAACATAGAGGTGTTCCAA+GGG + chr5_4:51995470-51995489 Msa0856980:CDS 40.0%
!! AAACATAGAGGTGTTCCAAG+GGG + chr5_4:51995471-51995490 Msa0856980:CDS 40.0%
AAATCACGGCTATTGATGCT+TGG + chr5_4:51995574-51995593 Msa0856980:intron 40.0%
! TCGTATCAGTTTTTCCATGG+GGG - chr5_4:51995610-51995629 None:intergenic 40.0%
! CAAGATCTTCAGTGCTCTTT+TGG - chr5_4:51995790-51995809 None:intergenic 40.0%
TAGTAGTCACCACACACAAT+AGG - chr5_4:51995830-51995849 None:intergenic 40.0%
CCAAAAGAGTAGTTTGACAG+AGG - chr5_4:51995869-51995888 None:intergenic 40.0%
! CCTCTGTCAAACTACTCTTT+TGG + chr5_4:51995866-51995885 Msa0856980:CDS 40.0%
ACTGACAGAAAAAACATCCG+AGG + chr5_4:51995919-51995938 Msa0856980:CDS 40.0%
GTTCGTTAGATTTGCCAACT+GGG + chr5_4:51995975-51995994 Msa0856980:intron 40.0%
TTCGTTAGATTTGCCAACTG+GGG + chr5_4:51995976-51995995 Msa0856980:intron 40.0%
GACAACAAGTATAGTCACTC+GGG - chr5_4:51996004-51996023 None:intergenic 40.0%
CGACAACAAGTATAGTCACT+CGG - chr5_4:51996005-51996024 None:intergenic 40.0%
!! CGAGTGACTATACTTGTTGT+CGG + chr5_4:51996003-51996022 Msa0856980:intron 40.0%
!! GAGTGACTATACTTGTTGTC+GGG + chr5_4:51996004-51996023 Msa0856980:intron 40.0%
! TTGTCGGGTAAGTCTTTTTG+TGG + chr5_4:51996019-51996038 Msa0856980:intron 40.0%
CAAAAAAACGGGATAACCGT+TGG - chr5_4:51996074-51996093 None:intergenic 40.0%
! CTGCTTTGTGTCTATGGTTT+TGG + chr5_4:51996209-51996228 Msa0856980:intron 40.0%
TCAACTTCAAGAACGTGCAA+GGG - chr5_4:51996546-51996565 None:intergenic 40.0%
ATCAACTTCAAGAACGTGCA+AGG - chr5_4:51996547-51996566 None:intergenic 40.0%
! ACCGGTTGATTTAGAACTAG+TGG - chr5_4:51997171-51997190 None:intergenic 40.0%
!!! ATCCAGCCTACTAGTTTTAC+CGG - chr5_4:51997189-51997208 None:intergenic 40.0%
!! TTGGTTAGTTTCAAGCACGA+AGG + chr5_4:51997323-51997342 Msa0856980:intron 40.0%
! ATCACTTCTAGAGAGGAGAT+GGG - chr5_4:51997437-51997456 None:intergenic 40.0%
! AGTTTGCATCACTTCTAGAG+AGG - chr5_4:51997444-51997463 None:intergenic 40.0%
AGTGATGCAAACTGAAGATG+AGG + chr5_4:51997451-51997470 Msa0856980:intron 40.0%
CGCTTCAGCTCTATATAACA+AGG - chr5_4:51997501-51997520 None:intergenic 40.0%
CTAGCAATGAAGAAAGGAGA+AGG + chr5_4:51997558-51997577 Msa0856980:intron 40.0%
!!! GAATTTTTTTTGGAGGGAGG+GGG + chr5_4:51997722-51997741 Msa0856980:intron 40.0%
AACCCAAACTCGATTAAAGC+GGG + chr5_4:51997925-51997944 Msa0856980:intron 40.0%
TTCCCGCTTTAATCGAGTTT+GGG - chr5_4:51997930-51997949 None:intergenic 40.0%
TTTCCCGCTTTAATCGAGTT+TGG - chr5_4:51997931-51997950 None:intergenic 40.0%
CGGGAAAAACCCGTTAAAAT+GGG + chr5_4:51997944-51997963 Msa0856980:intron 40.0%
!! CGAACCAAACCCATTTTAAC+GGG - chr5_4:51997956-51997975 None:intergenic 40.0%
GCAACAAAACTCATACTCGT+AGG - chr5_4:51997987-51998006 None:intergenic 40.0%
! GACGCGTGTTTAAAGTTAAG+TGG - chr5_4:51998077-51998096 None:intergenic 40.0%
CGTACGTAAAAAGCTTGTGT+TGG - chr5_4:51998307-51998326 None:intergenic 40.0%
!!! TAAACCACCGGCTTCTTTTT+CGG - chr5_4:51998514-51998533 None:intergenic 40.0%
GGATTGAAGTAACCATCCTT+CGG - chr5_4:51998559-51998578 None:intergenic 40.0%
TTACTTCAATCCCCCTGATT+TGG + chr5_4:51998567-51998586 Msa0856980:intron 40.0%
! AAAAAAAAGCGTGGTAGGTG+TGG + chr5_4:51998786-51998805 Msa0856980:intron 40.0%
GATATGTATGTGTTAGACCC+TGG + chr5_4:51999006-51999025 Msa0856980:intron 40.0%
CTTGAGTAATACCTACACTG+AGG + chr5_4:51999109-51999128 Msa0856980:intron 40.0%
TTGATCTTATCACCACTGCA+AGG + chr5_4:51999171-51999190 Msa0856980:intron 40.0%
CTTTCACCTGAACCTTAGAA+AGG - chr5_4:51999337-51999356 None:intergenic 40.0%
!! CTTTCTAAGGTTCAGGTGAA+AGG + chr5_4:51999335-51999354 Msa0856980:intron 40.0%
TGTTCGAATCACCAACGATA+TGG - chr5_4:51999776-51999795 None:intergenic 40.0%
TCTGCAAAGAAATTGGACCA+CGG - chr5_4:51999803-51999822 None:intergenic 40.0%
GTGCTTATGCTGCAATACTT+TGG + chr5_4:51999980-51999999 Msa0856980:intron 40.0%
TCGTCTAAAAGCTGATCATC+AGG + chr5_4:52000144-52000163 Msa0856980:CDS 40.0%
TGGCAGAGAAATTGTAGACA+TGG + chr5_4:52000174-52000193 Msa0856980:CDS 40.0%
TAGACATGGCTATTGATGCT+TGG + chr5_4:52000188-52000207 Msa0856980:CDS 40.0%
TTGGAACAAGTTGTCAGACA+AGG + chr5_4:52000207-52000226 Msa0856980:CDS 40.0%
GCCATATGAAAAGGAAAGCA+AGG + chr5_4:52000344-52000363 Msa0856980:intron 40.0%
! TTCACTCTTCAGTGCTCTTT+TGG - chr5_4:52000402-52000421 None:intergenic 40.0%
TAGTAGTCACCACACACATT+AGG - chr5_4:52000449-52000468 None:intergenic 40.0%
! TTTTGTCAACAATGCAGCAG+TGG + chr5_4:52000502-52000521 Msa0856980:CDS 40.0%
GACAAGCATTCAAATCACCT+GGG - chr5_4:52000574-52000593 None:intergenic 40.0%
! GGAATTAGTAGTGATGGAGA+TGG + chr5_4:51992995-51993014 Msa0856980:CDS 40.0%
! CTTGTACCTGTTTTACTTGG+AGG + chr5_4:51993662-51993681 Msa0856980:intron 40.0%
GGTTATCCACATTGTTGACA+TGG + chr5_4:51993722-51993741 Msa0856980:intron 40.0%
GCTACGTCGAAAACTAAATG+TGG - chr5_4:51993890-51993909 None:intergenic 40.0%
GGATAAGCTTGATCTGCAAA+TGG - chr5_4:51993963-51993982 None:intergenic 40.0%
TTCTCTTGAATGATTGCTGC+AGG + chr5_4:51994051-51994070 Msa0856980:intron 40.0%
!! GTTTCTGCTCTAAAACTGGA+AGG + chr5_4:51994103-51994122 Msa0856980:CDS 40.0%
TGGCAGCAATACAGGTTAAT+TGG + chr5_4:51994231-51994250 Msa0856980:intron 40.0%
GCCAAAATCAACCATATCGT+TGG + chr5_4:51994844-51994863 Msa0856980:intron 40.0%
CTTTCAAACCACCAACGATA+TGG - chr5_4:51994858-51994877 None:intergenic 40.0%
AAAGCTTATCATCAGGACGT+AGG + chr5_4:51995205-51995224 Msa0856980:CDS 40.0%
TAGAGATGGCTATTGATGCT+TGG + chr5_4:51995242-51995261 Msa0856980:CDS 40.0%
!! AGAAACATAGAGGTGTTCCA+AGG + chr5_4:51995469-51995488 Msa0856980:CDS 40.0%
!! GAAACATAGAGGTGTTCCAA+GGG + chr5_4:51995470-51995489 Msa0856980:CDS 40.0%
!! AAACATAGAGGTGTTCCAAG+GGG + chr5_4:51995471-51995490 Msa0856980:CDS 40.0%
AAATCACGGCTATTGATGCT+TGG + chr5_4:51995574-51995593 Msa0856980:intron 40.0%
! TCGTATCAGTTTTTCCATGG+GGG - chr5_4:51995610-51995629 None:intergenic 40.0%
! CAAGATCTTCAGTGCTCTTT+TGG - chr5_4:51995790-51995809 None:intergenic 40.0%
TAGTAGTCACCACACACAAT+AGG - chr5_4:51995830-51995849 None:intergenic 40.0%
CCAAAAGAGTAGTTTGACAG+AGG - chr5_4:51995869-51995888 None:intergenic 40.0%
! CCTCTGTCAAACTACTCTTT+TGG + chr5_4:51995866-51995885 Msa0856980:CDS 40.0%
ACTGACAGAAAAAACATCCG+AGG + chr5_4:51995919-51995938 Msa0856980:CDS 40.0%
GTTCGTTAGATTTGCCAACT+GGG + chr5_4:51995975-51995994 Msa0856980:intron 40.0%
TTCGTTAGATTTGCCAACTG+GGG + chr5_4:51995976-51995995 Msa0856980:intron 40.0%
GACAACAAGTATAGTCACTC+GGG - chr5_4:51996004-51996023 None:intergenic 40.0%
CGACAACAAGTATAGTCACT+CGG - chr5_4:51996005-51996024 None:intergenic 40.0%
!! CGAGTGACTATACTTGTTGT+CGG + chr5_4:51996003-51996022 Msa0856980:intron 40.0%
!! GAGTGACTATACTTGTTGTC+GGG + chr5_4:51996004-51996023 Msa0856980:intron 40.0%
! TTGTCGGGTAAGTCTTTTTG+TGG + chr5_4:51996019-51996038 Msa0856980:intron 40.0%
CAAAAAAACGGGATAACCGT+TGG - chr5_4:51996074-51996093 None:intergenic 40.0%
! CTGCTTTGTGTCTATGGTTT+TGG + chr5_4:51996209-51996228 Msa0856980:intron 40.0%
TCAACTTCAAGAACGTGCAA+GGG - chr5_4:51996546-51996565 None:intergenic 40.0%
ATCAACTTCAAGAACGTGCA+AGG - chr5_4:51996547-51996566 None:intergenic 40.0%
! ACCGGTTGATTTAGAACTAG+TGG - chr5_4:51997171-51997190 None:intergenic 40.0%
!!! ATCCAGCCTACTAGTTTTAC+CGG - chr5_4:51997189-51997208 None:intergenic 40.0%
!! TTGGTTAGTTTCAAGCACGA+AGG + chr5_4:51997323-51997342 Msa0856980:intron 40.0%
! ATCACTTCTAGAGAGGAGAT+GGG - chr5_4:51997437-51997456 None:intergenic 40.0%
! AGTTTGCATCACTTCTAGAG+AGG - chr5_4:51997444-51997463 None:intergenic 40.0%
AGTGATGCAAACTGAAGATG+AGG + chr5_4:51997451-51997470 Msa0856980:intron 40.0%
CGCTTCAGCTCTATATAACA+AGG - chr5_4:51997501-51997520 None:intergenic 40.0%
CTAGCAATGAAGAAAGGAGA+AGG + chr5_4:51997558-51997577 Msa0856980:intron 40.0%
!!! GAATTTTTTTTGGAGGGAGG+GGG + chr5_4:51997722-51997741 Msa0856980:intron 40.0%
AACCCAAACTCGATTAAAGC+GGG + chr5_4:51997925-51997944 Msa0856980:intron 40.0%
TTCCCGCTTTAATCGAGTTT+GGG - chr5_4:51997930-51997949 None:intergenic 40.0%
TTTCCCGCTTTAATCGAGTT+TGG - chr5_4:51997931-51997950 None:intergenic 40.0%
CGGGAAAAACCCGTTAAAAT+GGG + chr5_4:51997944-51997963 Msa0856980:intron 40.0%
!! CGAACCAAACCCATTTTAAC+GGG - chr5_4:51997956-51997975 None:intergenic 40.0%
GCAACAAAACTCATACTCGT+AGG - chr5_4:51997987-51998006 None:intergenic 40.0%
! GACGCGTGTTTAAAGTTAAG+TGG - chr5_4:51998077-51998096 None:intergenic 40.0%
CGTACGTAAAAAGCTTGTGT+TGG - chr5_4:51998307-51998326 None:intergenic 40.0%
!!! TAAACCACCGGCTTCTTTTT+CGG - chr5_4:51998514-51998533 None:intergenic 40.0%
GGATTGAAGTAACCATCCTT+CGG - chr5_4:51998559-51998578 None:intergenic 40.0%
TTACTTCAATCCCCCTGATT+TGG + chr5_4:51998567-51998586 Msa0856980:intron 40.0%
! AAAAAAAAGCGTGGTAGGTG+TGG + chr5_4:51998786-51998805 Msa0856980:intron 40.0%
GATATGTATGTGTTAGACCC+TGG + chr5_4:51999006-51999025 Msa0856980:intron 40.0%
CTTGAGTAATACCTACACTG+AGG + chr5_4:51999109-51999128 Msa0856980:intron 40.0%
TTGATCTTATCACCACTGCA+AGG + chr5_4:51999171-51999190 Msa0856980:intron 40.0%
CTTTCACCTGAACCTTAGAA+AGG - chr5_4:51999337-51999356 None:intergenic 40.0%
!! CTTTCTAAGGTTCAGGTGAA+AGG + chr5_4:51999335-51999354 Msa0856980:intron 40.0%
TGTTCGAATCACCAACGATA+TGG - chr5_4:51999776-51999795 None:intergenic 40.0%
TCTGCAAAGAAATTGGACCA+CGG - chr5_4:51999803-51999822 None:intergenic 40.0%
GTGCTTATGCTGCAATACTT+TGG + chr5_4:51999980-51999999 Msa0856980:intron 40.0%
TCGTCTAAAAGCTGATCATC+AGG + chr5_4:52000144-52000163 Msa0856980:CDS 40.0%
TGGCAGAGAAATTGTAGACA+TGG + chr5_4:52000174-52000193 Msa0856980:CDS 40.0%
TAGACATGGCTATTGATGCT+TGG + chr5_4:52000188-52000207 Msa0856980:CDS 40.0%
TTGGAACAAGTTGTCAGACA+AGG + chr5_4:52000207-52000226 Msa0856980:CDS 40.0%
GCCATATGAAAAGGAAAGCA+AGG + chr5_4:52000344-52000363 Msa0856980:intron 40.0%
! TTCACTCTTCAGTGCTCTTT+TGG - chr5_4:52000402-52000421 None:intergenic 40.0%
TAGTAGTCACCACACACATT+AGG - chr5_4:52000449-52000468 None:intergenic 40.0%
! TTTTGTCAACAATGCAGCAG+TGG + chr5_4:52000502-52000521 Msa0856980:CDS 40.0%
GACAAGCATTCAAATCACCT+GGG - chr5_4:52000574-52000593 None:intergenic 40.0%
AAAGCTCAGTGAGCTTACGA+TGG - chr5_4:51993118-51993137 None:intergenic 45.0%
! TCGTAAGCTCACTGAGCTTT+TGG + chr5_4:51993118-51993137 Msa0856980:CDS 45.0%
TCGTGACCTCCAAGTAAAAC+AGG - chr5_4:51993671-51993690 None:intergenic 45.0%
TACTTGGAGGTCACGAAAAG+AGG + chr5_4:51993675-51993694 Msa0856980:intron 45.0%
GAAAAGAGGAGGTTATCACC+AGG + chr5_4:51993689-51993708 Msa0856980:intron 45.0%
AATGTGGACACCACTCTCAA+AGG - chr5_4:51993874-51993893 None:intergenic 45.0%
TTTCGACGTAGCCTCAAACA+AGG + chr5_4:51993898-51993917 Msa0856980:intron 45.0%
! ACAGGAGGAAACCTTGTTTG+AGG - chr5_4:51993912-51993931 None:intergenic 45.0%
ACAAGGTTTCCTCCTGTATG+TGG + chr5_4:51993915-51993934 Msa0856980:intron 45.0%
CAAGGTTTCCTCCTGTATGT+GGG + chr5_4:51993916-51993935 Msa0856980:intron 45.0%
! TTTGGTTTCCCACATACAGG+AGG - chr5_4:51993927-51993946 None:intergenic 45.0%
GGACGAGCAAGATTATCAGA+AGG + chr5_4:51994460-51994479 Msa0856980:CDS 45.0%
CTGCAAAGAAATCTGGACTG+CGG - chr5_4:51994885-51994904 None:intergenic 45.0%
CTCTACGTAGTCAACCACAT+CGG - chr5_4:51994979-51994998 None:intergenic 45.0%
TGGTTGACTACGTAGAGTCA+CGG + chr5_4:51994982-51995001 Msa0856980:intron 45.0%
GGTGGCTCATATGAATTCAG+AGG + chr5_4:51995040-51995059 Msa0856980:intron 45.0%
!! GAATTCAGAGGTGCTTATGC+AGG + chr5_4:51995052-51995071 Msa0856980:intron 45.0%
GTTGTCAGACAAGGAGAAAC+AGG + chr5_4:51995270-51995289 Msa0856980:CDS 45.0%
TTCACGCTTGCCTCTTCATA+TGG - chr5_4:51995402-51995421 None:intergenic 45.0%
AGAGGCAAGCGTGAAGATAA+AGG + chr5_4:51995407-51995426 Msa0856980:CDS 45.0%
!! AGAGCACTGAAGATCTTGAG+AGG + chr5_4:51995792-51995811 Msa0856980:CDS 45.0%
!! GAGCACTGAAGATCTTGAGA+GGG + chr5_4:51995793-51995812 Msa0856980:CDS 45.0%
GAAGAGAGACCTATTGTGTG+TGG + chr5_4:51995818-51995837 Msa0856980:CDS 45.0%
CGTTCGTTAGATTTGCCAAC+TGG + chr5_4:51995974-51995993 Msa0856980:intron 45.0%
GACACAAAGCAGCTTAGCTA+AGG - chr5_4:51996201-51996220 None:intergenic 45.0%
! GCTAAGCTGCTTTGTGTCTA+TGG + chr5_4:51996203-51996222 Msa0856980:intron 45.0%
AACCGGTAAAACTAGTAGGC+TGG + chr5_4:51997184-51997203 Msa0856980:intron 45.0%
! CATCACTTCTAGAGAGGAGA+TGG - chr5_4:51997438-51997457 None:intergenic 45.0%
ATGAAGAAAGGAGAAGGCTC+CGG + chr5_4:51997564-51997583 Msa0856980:intron 45.0%
AGAAGTTAAGAATGAGGCGG+TGG + chr5_4:51997680-51997699 Msa0856980:intron 45.0%
! TTTCAAGACGGGTTTGGGTA+TGG + chr5_4:51997840-51997859 Msa0856980:intron 45.0%
! TTCAAGACGGGTTTGGGTAT+GGG + chr5_4:51997841-51997860 Msa0856980:intron 45.0%
ATGGTTACGAGACGAGTTAC+GGG - chr5_4:51997888-51997907 None:intergenic 45.0%
CATGGTTACGAGACGAGTTA+CGG - chr5_4:51997889-51997908 None:intergenic 45.0%
GCGGGAAAAACCCGTTAAAA+TGG + chr5_4:51997943-51997962 Msa0856980:intron 45.0%
TTTGTTGCCAGCCTAGATAG+TGG + chr5_4:51997999-51998018 Msa0856980:intron 45.0%
TTGTACACCACTATCTAGGC+TGG - chr5_4:51998009-51998028 None:intergenic 45.0%
! TTTTGCAGTGTATGGGGTGT+GGG - chr5_4:51998252-51998271 None:intergenic 45.0%
! ATTTTGCAGTGTATGGGGTG+TGG - chr5_4:51998253-51998272 None:intergenic 45.0%
TACGTACGACTTCCTCAGAA+AGG + chr5_4:51998319-51998338 Msa0856980:intron 45.0%
ACGTACGACTTCCTCAGAAA+GGG + chr5_4:51998320-51998339 Msa0856980:intron 45.0%
TGGAGATTGAAGAAGGTTGC+CGG + chr5_4:51998434-51998453 Msa0856980:intron 45.0%
TGAAGTAACCATCCTTCGGT+GGG - chr5_4:51998555-51998574 None:intergenic 45.0%
TTGAAGTAACCATCCTTCGG+TGG - chr5_4:51998556-51998575 None:intergenic 45.0%
GAGACACATATCCTCAGTGT+AGG - chr5_4:51999123-51999142 None:intergenic 45.0%
AAAGGTGGCAAAGATATCCG+AGG + chr5_4:51999410-51999429 Msa0856980:intron 45.0%
! CACAACCGATCGATTCACTT+TGG + chr5_4:51999609-51999628 Msa0856980:intron 45.0%
AGTAGCTCGTGTGAATTCAG+AGG + chr5_4:51999958-51999977 Msa0856980:intron 45.0%
GCTGATCATCAGGACATATG+TGG + chr5_4:52000154-52000173 Msa0856980:CDS 45.0%
GTTGTCAGACAAGGAGAAAC+AGG + chr5_4:51995270-51995289 Msa0856980:CDS 45.0%
GAAGAGAGACCTAATGTGTG+TGG + chr5_4:52000437-52000456 Msa0856980:CDS 45.0%
ACCTGGGAAAAAGGGATACT+CGG - chr5_4:52000558-52000577 None:intergenic 45.0%
CGACAAGCATTCAAATCACC+TGG - chr5_4:52000575-52000594 None:intergenic 45.0%
AAAGCTCAGTGAGCTTACGA+TGG - chr5_4:51993118-51993137 None:intergenic 45.0%
! TCGTAAGCTCACTGAGCTTT+TGG + chr5_4:51993118-51993137 Msa0856980:CDS 45.0%
TCGTGACCTCCAAGTAAAAC+AGG - chr5_4:51993671-51993690 None:intergenic 45.0%
TACTTGGAGGTCACGAAAAG+AGG + chr5_4:51993675-51993694 Msa0856980:intron 45.0%
GAAAAGAGGAGGTTATCACC+AGG + chr5_4:51993689-51993708 Msa0856980:intron 45.0%
AATGTGGACACCACTCTCAA+AGG - chr5_4:51993874-51993893 None:intergenic 45.0%
TTTCGACGTAGCCTCAAACA+AGG + chr5_4:51993898-51993917 Msa0856980:intron 45.0%
! ACAGGAGGAAACCTTGTTTG+AGG - chr5_4:51993912-51993931 None:intergenic 45.0%
ACAAGGTTTCCTCCTGTATG+TGG + chr5_4:51993915-51993934 Msa0856980:intron 45.0%
CAAGGTTTCCTCCTGTATGT+GGG + chr5_4:51993916-51993935 Msa0856980:intron 45.0%
! TTTGGTTTCCCACATACAGG+AGG - chr5_4:51993927-51993946 None:intergenic 45.0%
GGACGAGCAAGATTATCAGA+AGG + chr5_4:51994460-51994479 Msa0856980:CDS 45.0%
CTGCAAAGAAATCTGGACTG+CGG - chr5_4:51994885-51994904 None:intergenic 45.0%
CTCTACGTAGTCAACCACAT+CGG - chr5_4:51994979-51994998 None:intergenic 45.0%
TGGTTGACTACGTAGAGTCA+CGG + chr5_4:51994982-51995001 Msa0856980:intron 45.0%
GGTGGCTCATATGAATTCAG+AGG + chr5_4:51995040-51995059 Msa0856980:intron 45.0%
!! GAATTCAGAGGTGCTTATGC+AGG + chr5_4:51995052-51995071 Msa0856980:intron 45.0%
GTTGTCAGACAAGGAGAAAC+AGG + chr5_4:51995270-51995289 Msa0856980:CDS 45.0%
TTCACGCTTGCCTCTTCATA+TGG - chr5_4:51995402-51995421 None:intergenic 45.0%
AGAGGCAAGCGTGAAGATAA+AGG + chr5_4:51995407-51995426 Msa0856980:CDS 45.0%
!! AGAGCACTGAAGATCTTGAG+AGG + chr5_4:51995792-51995811 Msa0856980:CDS 45.0%
!! GAGCACTGAAGATCTTGAGA+GGG + chr5_4:51995793-51995812 Msa0856980:CDS 45.0%
GAAGAGAGACCTATTGTGTG+TGG + chr5_4:51995818-51995837 Msa0856980:CDS 45.0%
CGTTCGTTAGATTTGCCAAC+TGG + chr5_4:51995974-51995993 Msa0856980:intron 45.0%
GACACAAAGCAGCTTAGCTA+AGG - chr5_4:51996201-51996220 None:intergenic 45.0%
! GCTAAGCTGCTTTGTGTCTA+TGG + chr5_4:51996203-51996222 Msa0856980:intron 45.0%
AACCGGTAAAACTAGTAGGC+TGG + chr5_4:51997184-51997203 Msa0856980:intron 45.0%
! CATCACTTCTAGAGAGGAGA+TGG - chr5_4:51997438-51997457 None:intergenic 45.0%
ATGAAGAAAGGAGAAGGCTC+CGG + chr5_4:51997564-51997583 Msa0856980:intron 45.0%
AGAAGTTAAGAATGAGGCGG+TGG + chr5_4:51997680-51997699 Msa0856980:intron 45.0%
! TTTCAAGACGGGTTTGGGTA+TGG + chr5_4:51997840-51997859 Msa0856980:intron 45.0%
! TTCAAGACGGGTTTGGGTAT+GGG + chr5_4:51997841-51997860 Msa0856980:intron 45.0%
ATGGTTACGAGACGAGTTAC+GGG - chr5_4:51997888-51997907 None:intergenic 45.0%
CATGGTTACGAGACGAGTTA+CGG - chr5_4:51997889-51997908 None:intergenic 45.0%
GCGGGAAAAACCCGTTAAAA+TGG + chr5_4:51997943-51997962 Msa0856980:intron 45.0%
TTTGTTGCCAGCCTAGATAG+TGG + chr5_4:51997999-51998018 Msa0856980:intron 45.0%
TTGTACACCACTATCTAGGC+TGG - chr5_4:51998009-51998028 None:intergenic 45.0%
! TTTTGCAGTGTATGGGGTGT+GGG - chr5_4:51998252-51998271 None:intergenic 45.0%
! ATTTTGCAGTGTATGGGGTG+TGG - chr5_4:51998253-51998272 None:intergenic 45.0%
TACGTACGACTTCCTCAGAA+AGG + chr5_4:51998319-51998338 Msa0856980:intron 45.0%
ACGTACGACTTCCTCAGAAA+GGG + chr5_4:51998320-51998339 Msa0856980:intron 45.0%
TGGAGATTGAAGAAGGTTGC+CGG + chr5_4:51998434-51998453 Msa0856980:intron 45.0%
TGAAGTAACCATCCTTCGGT+GGG - chr5_4:51998555-51998574 None:intergenic 45.0%
TTGAAGTAACCATCCTTCGG+TGG - chr5_4:51998556-51998575 None:intergenic 45.0%
GAGACACATATCCTCAGTGT+AGG - chr5_4:51999123-51999142 None:intergenic 45.0%
AAAGGTGGCAAAGATATCCG+AGG + chr5_4:51999410-51999429 Msa0856980:intron 45.0%
! CACAACCGATCGATTCACTT+TGG + chr5_4:51999609-51999628 Msa0856980:intron 45.0%
AGTAGCTCGTGTGAATTCAG+AGG + chr5_4:51999958-51999977 Msa0856980:intron 45.0%
GCTGATCATCAGGACATATG+TGG + chr5_4:52000154-52000173 Msa0856980:CDS 45.0%
GTTGTCAGACAAGGAGAAAC+AGG + chr5_4:51995270-51995289 Msa0856980:CDS 45.0%
GAAGAGAGACCTAATGTGTG+TGG + chr5_4:52000437-52000456 Msa0856980:CDS 45.0%
ACCTGGGAAAAAGGGATACT+CGG - chr5_4:52000558-52000577 None:intergenic 45.0%
CGACAAGCATTCAAATCACC+TGG - chr5_4:52000575-52000594 None:intergenic 45.0%
!!! TTAAACTAATTTTTTTTTTA+TGG + chr5_4:51993551-51993570 Msa0856980:intron 5.0%
!!! TTTTTTTTAAAAAAAAAACA+AGG + chr5_4:51996970-51996989 Msa0856980:intron 5.0%
!!! TTAAACTAATTTTTTTTTTA+TGG + chr5_4:51993551-51993570 Msa0856980:intron 5.0%
!!! TTTTTTTTAAAAAAAAAACA+AGG + chr5_4:51996970-51996989 Msa0856980:intron 5.0%
TACGATGGAAGCTCTCAGTG+AGG - chr5_4:51993103-51993122 None:intergenic 50.0%
! ACTGAGCTTTTGGACCCTTC+TGG + chr5_4:51993128-51993147 Msa0856980:CDS 50.0%
TTGGAGGTCACGAAAAGAGG+AGG + chr5_4:51993678-51993697 Msa0856980:intron 50.0%
! GCTCGAATCTCCTTTGAGAG+TGG + chr5_4:51993861-51993880 Msa0856980:intron 50.0%
!! CCAGTTGCAGTTTGAGTTGC+AGG - chr5_4:51994214-51994233 None:intergenic 50.0%
CCTGCAACTCAAACTGCAAC+TGG + chr5_4:51994211-51994230 Msa0856980:CDS 50.0%
ACTGCAACTGGCAGCAATAC+AGG + chr5_4:51994223-51994242 Msa0856980:CDS 50.0%
GAAGGCAGCAAAGATATCCG+AGG + chr5_4:51994478-51994497 Msa0856980:CDS 50.0%
GTGGTTCGATCAAGATGGGT+TGG - chr5_4:51994954-51994973 None:intergenic 50.0%
! GGTGGTGGTTCGATCAAGAT+GGG - chr5_4:51994958-51994977 None:intergenic 50.0%
TACGTAGTCAACCACATCGG+TGG - chr5_4:51994976-51994995 None:intergenic 50.0%
GGTTGACTACGTAGAGTCAC+GGG + chr5_4:51994983-51995002 Msa0856980:intron 50.0%
!! AGAGGTGCTTATGCAGGAGT+TGG + chr5_4:51995058-51995077 Msa0856980:intron 50.0%
!! AAACGGAGAGGTGCTCCAAT+AGG + chr5_4:51995136-51995155 Msa0856980:CDS 50.0%
GCTTATCATCAGGACGTAGG+TGG + chr5_4:51995208-51995227 Msa0856980:CDS 50.0%
TATGCACTCTTCTGTCCCCT+TGG - chr5_4:51995489-51995508 None:intergenic 50.0%
GTCTAGCGCATTCATGCTTG+AGG - chr5_4:51995521-51995540 None:intergenic 50.0%
TTGGAAGATGATGTCCCCCA+TGG + chr5_4:51995593-51995612 Msa0856980:intron 50.0%
! CTCTTTTGGCAACAACGCAG+TGG + chr5_4:51995880-51995899 Msa0856980:CDS 50.0%
! TTTTGGCAACAACGCAGTGG+TGG + chr5_4:51995883-51995902 Msa0856980:CDS 50.0%
ACCTGGGAAAAAGGGATCCT+CGG - chr5_4:51995939-51995958 None:intergenic 50.0%
AACAAACAGGCCCAAAGTCG+TGG - chr5_4:51996804-51996823 None:intergenic 50.0%
CTAGTAGGCTGGATACTGAC+CGG + chr5_4:51997195-51997214 Msa0856980:intron 50.0%
TTTGGGTATGGGTTCAGGGT+GGG + chr5_4:51997852-51997871 Msa0856980:intron 50.0%
TCCTCAGAAAGGGACTCAAG+TGG + chr5_4:51998330-51998349 Msa0856980:intron 50.0%
!!! AACCGCTGTGTTTTGGTGTC+CGG - chr5_4:51998456-51998475 None:intergenic 50.0%
CACCAAAACACAGCGGTTGT+CGG + chr5_4:51998458-51998477 Msa0856980:CDS 50.0%
! ATCCGACAACCGCTGTGTTT+TGG - chr5_4:51998463-51998482 None:intergenic 50.0%
GAAGTAACCATCCTTCGGTG+GGG - chr5_4:51998554-51998573 None:intergenic 50.0%
GGTGATTCGAACAAGATCCG+TGG + chr5_4:51999783-51999802 Msa0856980:intron 50.0%
TGTACGCAGTCAAGCACATC+GGG - chr5_4:51999896-51999915 None:intergenic 50.0%
CTGTACGCAGTCAAGCACAT+CGG - chr5_4:51999897-51999916 None:intergenic 50.0%
TGCTTGACTGCGTACAGTCA+CGG + chr5_4:51999900-51999919 Msa0856980:intron 50.0%
AAACGGAGACGTGCTCCAAT+AGG + chr5_4:52000082-52000101 Msa0856980:CDS 50.0%
! TCCGAGTATCCCTTTTTCCC+AGG + chr5_4:52000554-52000573 Msa0856980:CDS 50.0%
TACGATGGAAGCTCTCAGTG+AGG - chr5_4:51993103-51993122 None:intergenic 50.0%
! ACTGAGCTTTTGGACCCTTC+TGG + chr5_4:51993128-51993147 Msa0856980:CDS 50.0%
TTGGAGGTCACGAAAAGAGG+AGG + chr5_4:51993678-51993697 Msa0856980:intron 50.0%
! GCTCGAATCTCCTTTGAGAG+TGG + chr5_4:51993861-51993880 Msa0856980:intron 50.0%
!! CCAGTTGCAGTTTGAGTTGC+AGG - chr5_4:51994214-51994233 None:intergenic 50.0%
CCTGCAACTCAAACTGCAAC+TGG + chr5_4:51994211-51994230 Msa0856980:CDS 50.0%
ACTGCAACTGGCAGCAATAC+AGG + chr5_4:51994223-51994242 Msa0856980:CDS 50.0%
GAAGGCAGCAAAGATATCCG+AGG + chr5_4:51994478-51994497 Msa0856980:CDS 50.0%
GTGGTTCGATCAAGATGGGT+TGG - chr5_4:51994954-51994973 None:intergenic 50.0%
! GGTGGTGGTTCGATCAAGAT+GGG - chr5_4:51994958-51994977 None:intergenic 50.0%
TACGTAGTCAACCACATCGG+TGG - chr5_4:51994976-51994995 None:intergenic 50.0%
GGTTGACTACGTAGAGTCAC+GGG + chr5_4:51994983-51995002 Msa0856980:intron 50.0%
!! AGAGGTGCTTATGCAGGAGT+TGG + chr5_4:51995058-51995077 Msa0856980:intron 50.0%
!! AAACGGAGAGGTGCTCCAAT+AGG + chr5_4:51995136-51995155 Msa0856980:CDS 50.0%
GCTTATCATCAGGACGTAGG+TGG + chr5_4:51995208-51995227 Msa0856980:CDS 50.0%
TATGCACTCTTCTGTCCCCT+TGG - chr5_4:51995489-51995508 None:intergenic 50.0%
GTCTAGCGCATTCATGCTTG+AGG - chr5_4:51995521-51995540 None:intergenic 50.0%
TTGGAAGATGATGTCCCCCA+TGG + chr5_4:51995593-51995612 Msa0856980:intron 50.0%
! CTCTTTTGGCAACAACGCAG+TGG + chr5_4:51995880-51995899 Msa0856980:CDS 50.0%
! TTTTGGCAACAACGCAGTGG+TGG + chr5_4:51995883-51995902 Msa0856980:CDS 50.0%
ACCTGGGAAAAAGGGATCCT+CGG - chr5_4:51995939-51995958 None:intergenic 50.0%
AACAAACAGGCCCAAAGTCG+TGG - chr5_4:51996804-51996823 None:intergenic 50.0%
CTAGTAGGCTGGATACTGAC+CGG + chr5_4:51997195-51997214 Msa0856980:intron 50.0%
TTTGGGTATGGGTTCAGGGT+GGG + chr5_4:51997852-51997871 Msa0856980:intron 50.0%
TCCTCAGAAAGGGACTCAAG+TGG + chr5_4:51998330-51998349 Msa0856980:intron 50.0%
!!! AACCGCTGTGTTTTGGTGTC+CGG - chr5_4:51998456-51998475 None:intergenic 50.0%
CACCAAAACACAGCGGTTGT+CGG + chr5_4:51998458-51998477 Msa0856980:CDS 50.0%
! ATCCGACAACCGCTGTGTTT+TGG - chr5_4:51998463-51998482 None:intergenic 50.0%
GAAGTAACCATCCTTCGGTG+GGG - chr5_4:51998554-51998573 None:intergenic 50.0%
GGTGATTCGAACAAGATCCG+TGG + chr5_4:51999783-51999802 Msa0856980:intron 50.0%
TGTACGCAGTCAAGCACATC+GGG - chr5_4:51999896-51999915 None:intergenic 50.0%
CTGTACGCAGTCAAGCACAT+CGG - chr5_4:51999897-51999916 None:intergenic 50.0%
TGCTTGACTGCGTACAGTCA+CGG + chr5_4:51999900-51999919 Msa0856980:intron 50.0%
AAACGGAGACGTGCTCCAAT+AGG + chr5_4:52000082-52000101 Msa0856980:CDS 50.0%
! TCCGAGTATCCCTTTTTCCC+AGG + chr5_4:52000554-52000573 Msa0856980:CDS 50.0%
! CGGTGGTGGTTCGATCAAGA+TGG - chr5_4:51994959-51994978 None:intergenic 55.0%
TGATCGAACCACCACCGATG+TGG + chr5_4:51994962-51994981 Msa0856980:intron 55.0%
GTAGTCAACCACATCGGTGG+TGG - chr5_4:51994973-51994992 None:intergenic 55.0%
GGTGCTCCAATAGGACAGAG+TGG + chr5_4:51995145-51995164 Msa0856980:CDS 55.0%
! TCCGAGGATCCCTTTTTCCC+AGG + chr5_4:51995935-51995954 Msa0856980:CDS 55.0%
GCTACTGCCTACGCATCCAA+CGG + chr5_4:51996055-51996074 Msa0856980:intron 55.0%
GGGATAACCGTTGGATGCGT+AGG - chr5_4:51996065-51996084 None:intergenic 55.0%
AGGAGATGGGCACGAGAGAA+TGG - chr5_4:51997424-51997443 None:intergenic 55.0%
AAGAAAGGAGAAGGCTCCGG+AGG + chr5_4:51997567-51997586 Msa0856980:intron 55.0%
TGAGGAGGGGGTTGAAAAGC+TGG + chr5_4:51997591-51997610 Msa0856980:intron 55.0%
ACGGGTTTGGGTATGGGTTC+AGG + chr5_4:51997847-51997866 Msa0856980:intron 55.0%
CGGGTTTGGGTATGGGTTCA+GGG + chr5_4:51997848-51997867 Msa0856980:intron 55.0%
GTTTGGGTATGGGTTCAGGG+TGG + chr5_4:51997851-51997870 Msa0856980:intron 55.0%
GCCACTTGAGTCCCTTTCTG+AGG - chr5_4:51998334-51998353 None:intergenic 55.0%
TGCCGGACACCAAAACACAG+CGG + chr5_4:51998451-51998470 Msa0856980:CDS 55.0%
!!! GGCTTCTTTTTCGGTGCCGA+GGG - chr5_4:51998505-51998524 None:intergenic 55.0%
! CTCGGCACCGAAAAAGAAGC+CGG + chr5_4:51998504-51998523 Msa0856980:CDS 55.0%
GTCGTTCGATCAAGATGGGC+TGG - chr5_4:51999872-51999891 None:intergenic 55.0%
GGGGGTCGTTCGATCAAGAT+GGG - chr5_4:51999876-51999895 None:intergenic 55.0%
TACGCAGTCAAGCACATCGG+GGG - chr5_4:51999894-51999913 None:intergenic 55.0%
GTACGCAGTCAAGCACATCG+GGG - chr5_4:51999895-51999914 None:intergenic 55.0%
GCTTGACTGCGTACAGTCAC+GGG + chr5_4:51999901-51999920 Msa0856980:intron 55.0%
! AGTCACGGGAGTGTGACTTC+TGG + chr5_4:51994997-51995016 Msa0856980:intron 55.0%
CGTGCTCCAATAGGTCAGAG+TGG + chr5_4:52000091-52000110 Msa0856980:CDS 55.0%
GACGAGCACATTCCTGCTTG+AGG - chr5_4:52000129-52000148 None:intergenic 55.0%
! CGGTGGTGGTTCGATCAAGA+TGG - chr5_4:51994959-51994978 None:intergenic 55.0%
TGATCGAACCACCACCGATG+TGG + chr5_4:51994962-51994981 Msa0856980:intron 55.0%
GTAGTCAACCACATCGGTGG+TGG - chr5_4:51994973-51994992 None:intergenic 55.0%
GGTGCTCCAATAGGACAGAG+TGG + chr5_4:51995145-51995164 Msa0856980:CDS 55.0%
! TCCGAGGATCCCTTTTTCCC+AGG + chr5_4:51995935-51995954 Msa0856980:CDS 55.0%
GCTACTGCCTACGCATCCAA+CGG + chr5_4:51996055-51996074 Msa0856980:intron 55.0%
GGGATAACCGTTGGATGCGT+AGG - chr5_4:51996065-51996084 None:intergenic 55.0%
AGGAGATGGGCACGAGAGAA+TGG - chr5_4:51997424-51997443 None:intergenic 55.0%
AAGAAAGGAGAAGGCTCCGG+AGG + chr5_4:51997567-51997586 Msa0856980:intron 55.0%
TGAGGAGGGGGTTGAAAAGC+TGG + chr5_4:51997591-51997610 Msa0856980:intron 55.0%
ACGGGTTTGGGTATGGGTTC+AGG + chr5_4:51997847-51997866 Msa0856980:intron 55.0%
CGGGTTTGGGTATGGGTTCA+GGG + chr5_4:51997848-51997867 Msa0856980:intron 55.0%
GTTTGGGTATGGGTTCAGGG+TGG + chr5_4:51997851-51997870 Msa0856980:intron 55.0%
GCCACTTGAGTCCCTTTCTG+AGG - chr5_4:51998334-51998353 None:intergenic 55.0%
TGCCGGACACCAAAACACAG+CGG + chr5_4:51998451-51998470 Msa0856980:CDS 55.0%
!!! GGCTTCTTTTTCGGTGCCGA+GGG - chr5_4:51998505-51998524 None:intergenic 55.0%
! CTCGGCACCGAAAAAGAAGC+CGG + chr5_4:51998504-51998523 Msa0856980:CDS 55.0%
GTCGTTCGATCAAGATGGGC+TGG - chr5_4:51999872-51999891 None:intergenic 55.0%
GGGGGTCGTTCGATCAAGAT+GGG - chr5_4:51999876-51999895 None:intergenic 55.0%
TACGCAGTCAAGCACATCGG+GGG - chr5_4:51999894-51999913 None:intergenic 55.0%
GTACGCAGTCAAGCACATCG+GGG - chr5_4:51999895-51999914 None:intergenic 55.0%
GCTTGACTGCGTACAGTCAC+GGG + chr5_4:51999901-51999920 Msa0856980:intron 55.0%
! AGTCACGGGAGTGTGACTTC+TGG + chr5_4:51994997-51995016 Msa0856980:intron 55.0%
CGTGCTCCAATAGGTCAGAG+TGG + chr5_4:52000091-52000110 Msa0856980:CDS 55.0%
GACGAGCACATTCCTGCTTG+AGG - chr5_4:52000129-52000148 None:intergenic 55.0%
GTCGAGCACACTCCTGCTTG+AGG - chr5_4:51995183-51995202 None:intergenic 60.0%
AGTCACTCGGGTTCCCCAGT+TGG - chr5_4:51995992-51996011 None:intergenic 60.0%
AAGGCTCCGGAGGATGAGGA+GGG + chr5_4:51997577-51997596 Msa0856980:intron 60.0%
TCAACCCCCTCCTCATCCTC+CGG - chr5_4:51997586-51997605 None:intergenic 60.0%
TGCCGAGGGACACATAGTCG+CGG - chr5_4:51998491-51998510 None:intergenic 60.0%
!!! CGGCTTCTTTTTCGGTGCCG+AGG - chr5_4:51998506-51998525 None:intergenic 60.0%
! GGCACCGAAAAAGAAGCCGG+TGG + chr5_4:51998507-51998526 Msa0856980:CDS 60.0%
GAAGAAGAAGGCCCCACCGA+AGG + chr5_4:51998540-51998559 Msa0856980:CDS 60.0%
AAGAAGGCCCCACCGAAGGA+TGG + chr5_4:51998544-51998563 Msa0856980:CDS 60.0%
CGGGGGTCGTTCGATCAAGA+TGG - chr5_4:51999877-51999896 None:intergenic 60.0%
GTCGAGCACACTCCTGCTTG+AGG - chr5_4:51995183-51995202 None:intergenic 60.0%
AGTCACTCGGGTTCCCCAGT+TGG - chr5_4:51995992-51996011 None:intergenic 60.0%
AAGGCTCCGGAGGATGAGGA+GGG + chr5_4:51997577-51997596 Msa0856980:intron 60.0%
TCAACCCCCTCCTCATCCTC+CGG - chr5_4:51997586-51997605 None:intergenic 60.0%
TGCCGAGGGACACATAGTCG+CGG - chr5_4:51998491-51998510 None:intergenic 60.0%
!!! CGGCTTCTTTTTCGGTGCCG+AGG - chr5_4:51998506-51998525 None:intergenic 60.0%
! GGCACCGAAAAAGAAGCCGG+TGG + chr5_4:51998507-51998526 Msa0856980:CDS 60.0%
GAAGAAGAAGGCCCCACCGA+AGG + chr5_4:51998540-51998559 Msa0856980:CDS 60.0%
AAGAAGGCCCCACCGAAGGA+TGG + chr5_4:51998544-51998563 Msa0856980:CDS 60.0%
CGGGGGTCGTTCGATCAAGA+TGG - chr5_4:51999877-51999896 None:intergenic 60.0%
GGAGAAGGCTCCGGAGGATG+AGG + chr5_4:51997573-51997592 Msa0856980:intron 65.0%
GAAGGCTCCGGAGGATGAGG+AGG + chr5_4:51997576-51997595 Msa0856980:intron 65.0%
AGGCTCCGGAGGATGAGGAG+GGG + chr5_4:51997578-51997597 Msa0856980:intron 65.0%
GAGGGACACATAGTCGCGGG+CGG - chr5_4:51998487-51998506 None:intergenic 65.0%
GCCCGCGACTATGTGTCCCT+CGG + chr5_4:51998486-51998505 Msa0856980:CDS 65.0%
GCCGAGGGACACATAGTCGC+GGG - chr5_4:51998490-51998509 None:intergenic 65.0%
GGAGAAGGCTCCGGAGGATG+AGG + chr5_4:51997573-51997592 Msa0856980:intron 65.0%
GAAGGCTCCGGAGGATGAGG+AGG + chr5_4:51997576-51997595 Msa0856980:intron 65.0%
AGGCTCCGGAGGATGAGGAG+GGG + chr5_4:51997578-51997597 Msa0856980:intron 65.0%
GAGGGACACATAGTCGCGGG+CGG - chr5_4:51998487-51998506 None:intergenic 65.0%
GCCCGCGACTATGTGTCCCT+CGG + chr5_4:51998486-51998505 Msa0856980:CDS 65.0%
GCCGAGGGACACATAGTCGC+GGG - chr5_4:51998490-51998509 None:intergenic 65.0%
GGCTCCGGAGGATGAGGAGG+GGG + chr5_4:51997579-51997598 Msa0856980:intron 70.0%
GGCTCCGGAGGATGAGGAGG+GGG + chr5_4:51997579-51997598 Msa0856980:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 51992981 52000652 51992981 ID=Msa0856980;Name=Msa0856980
chr5_4 mRNA 51992981 52000652 51992981 ID=Msa0856980-mRNA-1;Parent=Msa0856980;Name=Msa0856980-mRNA-1;_AED=0.12;_eAED=0.13;_QI=0|0.11|0.1|1|0.33|0.5|10|0|543
chr5_4 exon 51992981 51993162 51992981 ID=Msa0856980-mRNA-1:exon:16285;Parent=Msa0856980-mRNA-1
chr5_4 exon 51993684 51993699 51993684 ID=Msa0856980-mRNA-1:exon:16286;Parent=Msa0856980-mRNA-1
chr5_4 exon 51994073 51994244 51994073 ID=Msa0856980-mRNA-1:exon:16287;Parent=Msa0856980-mRNA-1
chr5_4 exon 51994411 51994521 51994411 ID=Msa0856980-mRNA-1:exon:16288;Parent=Msa0856980-mRNA-1
chr5_4 exon 51995110 51995291 51995110 ID=Msa0856980-mRNA-1:exon:16289;Parent=Msa0856980-mRNA-1
chr5_4 exon 51995399 51995564 51995399 ID=Msa0856980-mRNA-1:exon:16290;Parent=Msa0856980-mRNA-1
chr5_4 exon 51995744 51995956 51995744 ID=Msa0856980-mRNA-1:exon:16291;Parent=Msa0856980-mRNA-1
chr5_4 exon 51998446 51998565 51998446 ID=Msa0856980-mRNA-1:exon:16292;Parent=Msa0856980-mRNA-1
chr5_4 exon 52000020 52000242 52000020 ID=Msa0856980-mRNA-1:exon:16293;Parent=Msa0856980-mRNA-1
chr5_4 exon 52000406 52000652 52000406 ID=Msa0856980-mRNA-1:exon:16294;Parent=Msa0856980-mRNA-1
chr5_4 CDS 51992981 51993162 51992981 ID=Msa0856980-mRNA-1:cds;Parent=Msa0856980-mRNA-1
chr5_4 CDS 51993684 51993699 51993684 ID=Msa0856980-mRNA-1:cds;Parent=Msa0856980-mRNA-1
chr5_4 CDS 51994073 51994244 51994073 ID=Msa0856980-mRNA-1:cds;Parent=Msa0856980-mRNA-1
chr5_4 CDS 51994411 51994521 51994411 ID=Msa0856980-mRNA-1:cds;Parent=Msa0856980-mRNA-1
chr5_4 CDS 51995110 51995291 51995110 ID=Msa0856980-mRNA-1:cds;Parent=Msa0856980-mRNA-1
chr5_4 CDS 51995399 51995564 51995399 ID=Msa0856980-mRNA-1:cds;Parent=Msa0856980-mRNA-1
chr5_4 CDS 51995744 51995956 51995744 ID=Msa0856980-mRNA-1:cds;Parent=Msa0856980-mRNA-1
chr5_4 CDS 51998446 51998565 51998446 ID=Msa0856980-mRNA-1:cds;Parent=Msa0856980-mRNA-1
chr5_4 CDS 52000020 52000242 52000020 ID=Msa0856980-mRNA-1:cds;Parent=Msa0856980-mRNA-1
chr5_4 CDS 52000406 52000652 52000406 ID=Msa0856980-mRNA-1:cds;Parent=Msa0856980-mRNA-1
Gene Sequence

>Msa0856980

ATGGAAGAAGGAAAGGAATTAGTAGTGATGGAGATGGTTCCATATGAAAATGAAAATGAGATTTTTTCATCAATGGAAGAAGCAAAGGAATTAGAGATGGAGATGATTCCATATTATATCCTCACTGAGAGCTTCCATCGTAAGCTCACTGAGCTTTTGGACCCTTCTGGATTCAATCTCATGTCACGAAAAGAGGAGGTTGATCAAGAAAAGAAATGGGGTGAAGTTGTTTCTGCTCTAAAACTGGAAGGAAACAATGCAACCTTATGTGATCAACTTGAAAAGCTATATAAAGAGCTTCTGTACAAATTTGAGACATTGTACTTCTACAGGTCTCCTGCAACTCAAACTGCAACTGGCAGCAATACAGGTCCAGTTGAAAGGAATCAAAACTCAACCACTAGTTTATCTCAATTAATGGACGAGCAAGATTATCAGAAGGCAGCAAAGATATCCGAGGACTACTCTAGTCAAATTACAGCACCCGCAAAGAACAAAGAAAAGAAGAAACGGAGAGGTGCTCCAATAGGACAGAGTGGATATAATATATTCCTCAAGCAGGAGTGTGCTCGACTTAAAGCTTATCATCAGGACGTAGGTGGAAGAAAAATCATAGAGATGGCTATTGATGCTTGGAATAAGTTGTCAGACAAGGAGAAACAGCCATATGAAGAGGCAAGCGTGAAGATAAAGGAAGAAATTAAAGAAGCACCCACCAATAACAAAGAAAAGAAGAAACATAGAGGTGTTCCAAGGGGACAGAAGAGTGCATATCAAATATTCCTCAAGCATGAATGCGCTAGACTTAAAGCTGATCATCAGTTTAAAGAGGAAAGCATGAAGATAAAGGAAGAAATTAAAGAAGCAATGATCCAAAAGAGCACTGAAGATCTTGAGAGGGATGAAGAGAGACCTATTGTGTGTGGTGACTACTACTCTGTAACTTCACAACCTCTGTCAAACTACTCTTTTGGCAACAACGCAGTGGTGGACTTAGATTTTAAACTGACAGAAAAAACATCCGAGGATCCCTTTTTCCCAGAAGGTTGCCGGACACCAAAACACAGCGGTTGTCGGATACCGCCCGCGACTATGTGTCCCTCGGCACCGAAAAAGAAGCCGGTGGTTTATTCAACGAAGAAGAAGGCCCCACCGAAGGATGGAGTTGGATATCAAGAACATCAAGTGTTTCAACAAGCACCCACAAATAACAAAGAAAAGAAGAAACGGAGACGTGCTCCAATAGGTCAGAGTGGATATAATATATTCCTCAAGCAGGAATGTGCTCGTCTAAAAGCTGATCATCAGGACATATGTGGCAGAGAAATTGTAGACATGGCTATTGATGCTTGGAACAAGTTGTCAGACAAGGAGAAACAGGTACAAGCACTGAAGAGTGAAGATCTTAAGAGGGATGAAGAGAGACCTAATGTGTGTGGTGACTACTACTGTGTAAATTCAGAACCTCTATCAAACTACTCTTTTGTCAACAATGCAGCAGTGGACTTAGCTTTTGAAATGACTGAAAAAACATCCGAGTATCCCTTTTTCCCAGGTGATTTGAATGCTTGTCGTTCGGTCGATTTGCTAACTGAAGAACGTAAATTAATGACTAGACTTGTTGTTGGGTAA

Protein sequence

>Msa0856980

MEEGKELVVMEMVPYENENEIFSSMEEAKELEMEMIPYYILTESFHRKLTELLDPSGFNLMSRKEEVDQEKKWGEVVSALKLEGNNATLCDQLEKLYKELLYKFETLYFYRSPATQTATGSNTGPVERNQNSTTSLSQLMDEQDYQKAAKISEDYSSQITAPAKNKEKKKRRGAPIGQSGYNIFLKQECARLKAYHQDVGGRKIIEMAIDAWNKLSDKEKQPYEEASVKIKEEIKEAPTNNKEKKKHRGVPRGQKSAYQIFLKHECARLKADHQFKEESMKIKEEIKEAMIQKSTEDLERDEERPIVCGDYYSVTSQPLSNYSFGNNAVVDLDFKLTEKTSEDPFFPEGCRTPKHSGCRIPPATMCPSAPKKKPVVYSTKKKAPPKDGVGYQEHQVFQQAPTNNKEKKKRRRAPIGQSGYNIFLKQECARLKADHQDICGREIVDMAIDAWNKLSDKEKQVQALKSEDLKRDEERPNVCGDYYCVNSEPLSNYSFVNNAAVDLAFEMTEKTSEYPFFPGDLNACRSVDLLTEERKLMTRLVVG*