Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0859280 | XP_003616758.1 | 96.429 | 196 | 7 | 0 | 1 | 196 | 1 | 196 | 4.51e-139 | 396 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0859280 | sp|Q8L5T5|LBD15_ARATH | 71.856 | 167 | 36 | 4 | 1 | 157 | 1 | 166 | 5.05e-69 | 213 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0859280 | G7KH28 | 96.429 | 196 | 7 | 0 | 1 | 196 | 1 | 196 | 2.15e-139 | 396 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0859280 | TF | LOB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0859280 | MtrunA17_Chr5g0438091 | 96.429 | 196 | 7 | 0 | 1 | 196 | 1 | 196 | 4.15e-143 | 396 |
| Msa0859280 | MtrunA17_Chr3g0129071 | 62.185 | 238 | 45 | 8 | 1 | 195 | 1 | 236 | 1.42e-82 | 244 |
| Msa0859280 | MtrunA17_Chr5g0432451 | 58.190 | 232 | 57 | 7 | 1 | 195 | 1 | 229 | 4.55e-70 | 213 |
| Msa0859280 | MtrunA17_Chr2g0311601 | 63.393 | 112 | 41 | 0 | 35 | 146 | 9 | 120 | 3.77e-49 | 157 |
| Msa0859280 | MtrunA17_Chr5g0437571 | 60.504 | 119 | 47 | 0 | 34 | 152 | 1 | 119 | 5.20e-49 | 157 |
| Msa0859280 | MtrunA17_Chr3g0114061 | 67.619 | 105 | 34 | 0 | 35 | 139 | 4 | 108 | 5.31e-48 | 154 |
| Msa0859280 | MtrunA17_Chr4g0043421 | 66.019 | 103 | 35 | 0 | 36 | 138 | 12 | 114 | 1.30e-47 | 153 |
| Msa0859280 | MtrunA17_Chr4g0058651 | 62.385 | 109 | 41 | 0 | 38 | 146 | 10 | 118 | 7.70e-45 | 147 |
| Msa0859280 | MtrunA17_Chr7g0227511 | 62.617 | 107 | 40 | 0 | 36 | 142 | 8 | 114 | 1.50e-44 | 145 |
| Msa0859280 | MtrunA17_Chr3g0106101 | 55.645 | 124 | 50 | 1 | 37 | 155 | 5 | 128 | 1.05e-43 | 144 |
| Msa0859280 | MtrunA17_Chr3g0117121 | 59.091 | 110 | 45 | 0 | 37 | 146 | 8 | 117 | 5.77e-43 | 142 |
| Msa0859280 | MtrunA17_Chr6g0449641 | 60.577 | 104 | 41 | 0 | 36 | 139 | 6 | 109 | 8.19e-43 | 140 |
| Msa0859280 | MtrunA17_Chr3g0115431 | 59.813 | 107 | 43 | 0 | 36 | 142 | 6 | 112 | 2.18e-42 | 142 |
| Msa0859280 | MtrunA17_Chr5g0402611 | 60.748 | 107 | 42 | 0 | 36 | 142 | 5 | 111 | 2.45e-42 | 144 |
| Msa0859280 | MtrunA17_Chr4g0030001 | 55.263 | 114 | 50 | 1 | 38 | 150 | 23 | 136 | 4.46e-42 | 140 |
| Msa0859280 | MtrunA17_Chr6g0449651 | 57.009 | 107 | 46 | 0 | 36 | 142 | 64 | 170 | 5.67e-41 | 137 |
| Msa0859280 | MtrunA17_Chr3g0113891 | 59.804 | 102 | 41 | 0 | 36 | 137 | 11 | 112 | 1.50e-40 | 136 |
| Msa0859280 | MtrunA17_Chr3g0097221 | 55.963 | 109 | 48 | 0 | 36 | 144 | 4 | 112 | 5.94e-40 | 137 |
| Msa0859280 | MtrunA17_Chr1g0200201 | 54.955 | 111 | 50 | 0 | 40 | 150 | 73 | 183 | 6.08e-40 | 135 |
| Msa0859280 | MtrunA17_Chr7g0245871 | 62.745 | 102 | 37 | 1 | 39 | 139 | 27 | 128 | 1.01e-39 | 135 |
| Msa0859280 | MtrunA17_Chr5g0437401 | 55.660 | 106 | 47 | 0 | 36 | 141 | 8 | 113 | 7.02e-39 | 131 |
| Msa0859280 | MtrunA17_Chr8g0353981 | 43.590 | 156 | 88 | 0 | 36 | 191 | 4 | 159 | 7.71e-39 | 133 |
| Msa0859280 | MtrunA17_Chr7g0260971 | 52.174 | 115 | 53 | 2 | 27 | 139 | 1 | 115 | 3.55e-37 | 128 |
| Msa0859280 | MtrunA17_Chr7g0225111 | 53.333 | 105 | 49 | 0 | 40 | 144 | 6 | 110 | 4.07e-36 | 122 |
| Msa0859280 | MtrunA17_Chr8g0351701 | 47.794 | 136 | 65 | 3 | 39 | 168 | 23 | 158 | 3.94e-35 | 123 |
| Msa0859280 | MtrunA17_Chr5g0444351 | 46.457 | 127 | 65 | 1 | 40 | 166 | 6 | 129 | 2.02e-34 | 119 |
| Msa0859280 | MtrunA17_Chr8g0351721 | 50.435 | 115 | 56 | 1 | 39 | 152 | 18 | 132 | 3.41e-34 | 120 |
| Msa0859280 | MtrunA17_Chr1g0184281 | 53.465 | 101 | 46 | 1 | 39 | 138 | 15 | 115 | 4.06e-34 | 120 |
| Msa0859280 | MtrunA17_Chr6g0460951 | 49.107 | 112 | 56 | 1 | 38 | 148 | 39 | 150 | 1.64e-33 | 119 |
| Msa0859280 | MtrunA17_Chr7g0261031 | 50.877 | 114 | 48 | 3 | 27 | 138 | 1 | 108 | 1.00e-32 | 117 |
| Msa0859280 | MtrunA17_Chr1g0184271 | 53.922 | 102 | 44 | 2 | 39 | 138 | 12 | 112 | 3.05e-32 | 116 |
| Msa0859280 | MtrunA17_Chr5g0435641 | 50.505 | 99 | 48 | 1 | 38 | 135 | 6 | 104 | 3.04e-30 | 109 |
| Msa0859280 | MtrunA17_Chr8g0374601 | 47.115 | 104 | 55 | 0 | 39 | 142 | 26 | 129 | 2.00e-29 | 110 |
| Msa0859280 | MtrunA17_Chr7g0245861 | 54.444 | 90 | 38 | 2 | 39 | 125 | 12 | 101 | 2.55e-27 | 100 |
| Msa0859280 | MtrunA17_Chr8g0374591 | 41.739 | 115 | 64 | 1 | 39 | 150 | 8 | 122 | 3.49e-27 | 100 |
| Msa0859280 | MtrunA17_Chr6g0460941 | 45.161 | 93 | 50 | 1 | 35 | 126 | 3 | 95 | 1.39e-26 | 97.4 |
| Msa0859280 | MtrunA17_Chr6g0452691 | 39.806 | 103 | 61 | 1 | 32 | 133 | 2 | 104 | 2.79e-25 | 96.7 |
| Msa0859280 | MtrunA17_Chr8g0374581 | 46.667 | 105 | 55 | 1 | 39 | 142 | 8 | 112 | 2.82e-25 | 97.8 |
| Msa0859280 | MtrunA17_Chr4g0059901 | 37.705 | 122 | 76 | 0 | 36 | 157 | 7 | 128 | 8.73e-25 | 97.4 |
| Msa0859280 | MtrunA17_Chr6g0452671 | 38.235 | 102 | 63 | 0 | 35 | 136 | 7 | 108 | 1.05e-23 | 93.2 |
| Msa0859280 | MtrunA17_Chr6g0452661 | 37.755 | 98 | 60 | 1 | 40 | 136 | 10 | 107 | 6.27e-22 | 89.7 |
| Msa0859280 | MtrunA17_Chr4g0040831 | 35.185 | 108 | 68 | 1 | 40 | 147 | 16 | 121 | 3.25e-21 | 86.7 |
| Msa0859280 | MtrunA17_Chr2g0330201 | 39.048 | 105 | 62 | 2 | 36 | 139 | 16 | 119 | 7.21e-21 | 87.8 |
| Msa0859280 | MtrunA17_Chr8g0342351 | 35.780 | 109 | 68 | 2 | 36 | 143 | 9 | 116 | 2.59e-20 | 85.5 |
| Msa0859280 | MtrunA17_Chr5g0439111 | 34.579 | 107 | 66 | 2 | 34 | 136 | 1 | 107 | 1.22e-19 | 83.2 |
| Msa0859280 | MtrunA17_Chr4g0055441 | 35.714 | 98 | 62 | 1 | 40 | 136 | 3 | 100 | 2.10e-19 | 80.9 |
| Msa0859280 | MtrunA17_Chr2g0326041 | 62.000 | 50 | 19 | 0 | 38 | 87 | 32 | 81 | 5.83e-18 | 75.1 |
| Msa0859280 | MtrunA17_Chr2g0326051 | 50.746 | 67 | 33 | 0 | 84 | 150 | 5 | 71 | 1.06e-16 | 72.8 |
| Msa0859280 | MtrunA17_Chr4g0046201 | 32.955 | 88 | 59 | 0 | 38 | 125 | 5 | 92 | 5.91e-14 | 68.6 |
| Msa0859280 | MtrunA17_Chr8g0337271 | 27.891 | 147 | 99 | 2 | 40 | 185 | 11 | 151 | 1.70e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0859280 | AT2G40470.1 | 71.856 | 167 | 36 | 4 | 1 | 157 | 1 | 166 | 5.13e-70 | 213 |
| Msa0859280 | AT2G30340.1 | 61.818 | 165 | 50 | 2 | 1 | 152 | 1 | 165 | 1.11e-66 | 206 |
| Msa0859280 | AT2G40470.2 | 79.104 | 134 | 25 | 1 | 27 | 157 | 8 | 141 | 3.66e-66 | 202 |
| Msa0859280 | AT2G30340.2 | 61.392 | 158 | 49 | 2 | 6 | 152 | 10 | 166 | 2.87e-65 | 202 |
| Msa0859280 | AT2G30130.1 | 66.990 | 103 | 34 | 0 | 37 | 139 | 6 | 108 | 6.02e-46 | 150 |
| Msa0859280 | AT1G31320.1 | 59.829 | 117 | 47 | 0 | 35 | 151 | 9 | 125 | 6.81e-46 | 149 |
| Msa0859280 | AT5G63090.4 | 52.381 | 147 | 65 | 2 | 27 | 170 | 1 | 145 | 1.42e-43 | 144 |
| Msa0859280 | AT5G63090.3 | 52.381 | 147 | 65 | 2 | 27 | 170 | 1 | 145 | 1.42e-43 | 144 |
| Msa0859280 | AT5G63090.2 | 52.381 | 147 | 65 | 2 | 27 | 170 | 1 | 145 | 1.42e-43 | 144 |
| Msa0859280 | AT5G63090.1 | 52.381 | 147 | 65 | 2 | 27 | 170 | 1 | 145 | 1.42e-43 | 144 |
| Msa0859280 | AT3G27650.1 | 60.748 | 107 | 42 | 0 | 36 | 142 | 36 | 142 | 2.47e-43 | 142 |
| Msa0859280 | AT5G66870.1 | 55.072 | 138 | 57 | 3 | 36 | 173 | 4 | 136 | 7.03e-43 | 146 |
| Msa0859280 | AT1G07900.1 | 54.867 | 113 | 51 | 0 | 38 | 150 | 32 | 144 | 4.21e-42 | 140 |
| Msa0859280 | AT2G28500.1 | 54.867 | 113 | 51 | 0 | 38 | 150 | 54 | 166 | 1.47e-41 | 140 |
| Msa0859280 | AT1G16530.1 | 52.713 | 129 | 59 | 2 | 36 | 162 | 11 | 139 | 2.09e-41 | 138 |
| Msa0859280 | AT2G23660.2 | 57.944 | 107 | 45 | 0 | 36 | 142 | 2 | 108 | 6.27e-41 | 141 |
| Msa0859280 | AT2G23660.3 | 57.944 | 107 | 45 | 0 | 36 | 142 | 2 | 108 | 6.27e-41 | 141 |
| Msa0859280 | AT2G23660.1 | 57.944 | 107 | 45 | 0 | 36 | 142 | 2 | 108 | 6.27e-41 | 141 |
| Msa0859280 | AT1G65620.1 | 61.468 | 109 | 42 | 0 | 35 | 143 | 5 | 113 | 1.65e-40 | 136 |
| Msa0859280 | AT1G65620.4 | 61.468 | 109 | 42 | 0 | 35 | 143 | 5 | 113 | 1.65e-40 | 136 |
| Msa0859280 | AT1G65620.3 | 61.468 | 109 | 42 | 0 | 35 | 143 | 5 | 113 | 1.65e-40 | 136 |
| Msa0859280 | AT1G65620.5 | 61.468 | 109 | 42 | 0 | 35 | 143 | 5 | 113 | 1.65e-40 | 136 |
| Msa0859280 | AT1G65620.2 | 61.468 | 109 | 42 | 0 | 35 | 143 | 5 | 113 | 1.65e-40 | 136 |
| Msa0859280 | AT3G11090.1 | 52.500 | 120 | 57 | 0 | 36 | 155 | 8 | 127 | 4.82e-38 | 129 |
| Msa0859280 | AT3G26620.1 | 55.000 | 100 | 45 | 0 | 40 | 139 | 6 | 105 | 4.23e-37 | 125 |
| Msa0859280 | AT3G26660.1 | 55.000 | 100 | 45 | 0 | 40 | 139 | 6 | 105 | 4.62e-37 | 125 |
| Msa0859280 | AT2G42430.1 | 48.387 | 124 | 63 | 1 | 33 | 155 | 9 | 132 | 1.15e-35 | 125 |
| Msa0859280 | AT3G03760.1 | 51.786 | 112 | 53 | 1 | 38 | 148 | 50 | 161 | 5.17e-35 | 124 |
| Msa0859280 | AT4G00210.1 | 53.922 | 102 | 46 | 1 | 39 | 139 | 11 | 112 | 8.65e-34 | 120 |
| Msa0859280 | AT2G31310.1 | 51.961 | 102 | 48 | 1 | 38 | 138 | 6 | 107 | 8.57e-33 | 116 |
| Msa0859280 | AT4G00220.1 | 55.769 | 104 | 45 | 1 | 42 | 144 | 20 | 123 | 1.31e-32 | 117 |
| Msa0859280 | AT3G58190.1 | 52.941 | 102 | 45 | 2 | 39 | 138 | 11 | 111 | 1.97e-32 | 116 |
| Msa0859280 | AT5G06080.1 | 49.107 | 112 | 56 | 1 | 38 | 148 | 6 | 117 | 5.09e-32 | 114 |
| Msa0859280 | AT2G45420.1 | 50.962 | 104 | 50 | 1 | 42 | 144 | 40 | 143 | 7.07e-31 | 114 |
| Msa0859280 | AT2G42440.1 | 50.485 | 103 | 48 | 2 | 38 | 138 | 6 | 107 | 1.54e-30 | 112 |
| Msa0859280 | AT2G45410.1 | 51.515 | 99 | 47 | 1 | 42 | 139 | 19 | 117 | 1.16e-29 | 108 |
| Msa0859280 | AT3G50510.1 | 41.026 | 117 | 69 | 0 | 37 | 153 | 10 | 126 | 1.54e-26 | 100 |
| Msa0859280 | AT3G50510.2 | 41.026 | 117 | 69 | 0 | 37 | 153 | 10 | 126 | 1.54e-26 | 100 |
| Msa0859280 | AT3G47870.1 | 38.889 | 108 | 66 | 0 | 36 | 143 | 33 | 140 | 1.17e-25 | 101 |
| Msa0859280 | AT1G72980.1 | 40.385 | 104 | 62 | 0 | 36 | 139 | 10 | 113 | 1.38e-22 | 90.9 |
| Msa0859280 | AT5G35900.1 | 37.500 | 104 | 65 | 0 | 36 | 139 | 2 | 105 | 4.83e-22 | 89.4 |
| Msa0859280 | AT3G13850.1 | 33.654 | 104 | 69 | 0 | 40 | 143 | 37 | 140 | 7.54e-20 | 84.7 |
| Msa0859280 | AT1G06280.1 | 46.753 | 77 | 41 | 0 | 40 | 116 | 25 | 101 | 1.51e-18 | 80.1 |
| Msa0859280 | AT4G22700.1 | 39.216 | 102 | 51 | 4 | 40 | 132 | 6 | 105 | 1.16e-15 | 72.0 |
| Msa0859280 | AT2G19820.1 | 33.333 | 90 | 59 | 1 | 38 | 126 | 11 | 100 | 4.47e-15 | 68.9 |
| Msa0859280 | AT5G15060.1 | 40.541 | 74 | 40 | 2 | 40 | 110 | 18 | 90 | 1.41e-11 | 60.1 |
| Msa0859280 | AT1G36000.1 | 30.108 | 93 | 63 | 2 | 34 | 125 | 4 | 95 | 2.04e-11 | 59.3 |
Find 42 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATATGGTTACAAAATT+TGG | 0.076879 | 5_4:+57612419 | None:intergenic |
| TTTGGTTTGGTGTGCTTAAA+AGG | 0.183524 | 5_4:+57612437 | None:intergenic |
| AAGGATAGATAGAGAAGTTT+TGG | 0.202073 | 5_4:+57612368 | None:intergenic |
| GGAGAGAAATATGGAGAAAA+AGG | 0.233084 | 5_4:+57611959 | None:intergenic |
| CTTGCAAATTTAATCAAAAT+AGG | 0.235336 | 5_4:+57610916 | None:intergenic |
| CATGTATAAGAGTTAATTTA+TGG | 0.243504 | 5_4:+57612344 | None:intergenic |
| GCTTCTGTCCACAAAGTCTT+TGG | 0.267396 | 5_4:-57611917 | Msa0859280:CDS |
| TTACCTTTCTTTGGACATTC+AGG | 0.274756 | 5_4:+57612307 | None:intergenic |
| AGGCTAAGAGATCCAGTTTA+TGG | 0.306813 | 5_4:-57611178 | Msa0859280:CDS |
| GCATCTGCTCTTTGATTCTC+TGG | 0.341032 | 5_4:+57611232 | None:intergenic |
| CTTTCCAATCATATATCTTC+AGG | 0.349103 | 5_4:+57610771 | None:intergenic |
| GGAATTGAAGATACAAAATA+TGG | 0.349234 | 5_4:+57612406 | None:intergenic |
| GGAAGAATGTTAAGTCCTTC+AGG | 0.364784 | 5_4:-57612049 | Msa0859280:CDS |
| GGCTCATGAGGAGAGAAATA+TGG | 0.368976 | 5_4:+57611950 | None:intergenic |
| GCACCCATGCATCCATAAAC+TGG | 0.381798 | 5_4:+57611166 | None:intergenic |
| CAACGTCTCAAAATTGCTAT+TGG | 0.397461 | 5_4:-57611888 | Msa0859280:intron |
| TATGGTTACAAAATTTGGTT+TGG | 0.404275 | 5_4:+57612424 | None:intergenic |
| ACTTGAAATTGAGCTATAAC+TGG | 0.426496 | 5_4:+57610949 | None:intergenic |
| CAACAAGTTCAATCATTACT+AGG | 0.447623 | 5_4:-57611127 | Msa0859280:CDS |
| TGCTGGCACCAAAGACTTTG+TGG | 0.448216 | 5_4:+57611909 | None:intergenic |
| TAGTTTATGAAGCAAATGTA+AGG | 0.466219 | 5_4:-57611198 | Msa0859280:CDS |
| TAAATAGAAGAAGGAAGCCT+TGG | 0.522625 | 5_4:+57610992 | None:intergenic |
| GAGATAGGAAAGAAGAGAGA+GGG | 0.526552 | 5_4:-57612091 | Msa0859280:CDS |
| AGATCCAGTTTATGGATGCA+TGG | 0.526865 | 5_4:-57611170 | Msa0859280:CDS |
| ATTGATACATCATCTGAAGA+AGG | 0.534416 | 5_4:+57611043 | None:intergenic |
| TTTGAGACGAAGGTGTGCCC+AGG | 0.536248 | 5_4:-57611987 | Msa0859280:CDS |
| ATGCCTGAATGTCCAAAGAA+AGG | 0.541123 | 5_4:-57612310 | Msa0859280:intron |
| ATAAGAGTTAATTTATGGAA+AGG | 0.541251 | 5_4:+57612349 | None:intergenic |
| GCAAACTTCTGAGGCTCATG+AGG | 0.547685 | 5_4:+57611938 | None:intergenic |
| TGAGATAGGAAAGAAGAGAG+AGG | 0.549797 | 5_4:-57612092 | Msa0859280:CDS |
| AATTCATAAATACAAACTCA+TGG | 0.552933 | 5_4:-57611080 | Msa0859280:CDS |
| GAAATTGAGCTATAACTGGT+AGG | 0.562061 | 5_4:+57610953 | None:intergenic |
| TGTTGTGTGTAAATAGAAGA+AGG | 0.566644 | 5_4:+57610983 | None:intergenic |
| AAAAGACTATATATTAGTCA+TGG | 0.576869 | 5_4:-57610845 | Msa0859280:three_prime_UTR |
| GATCCAGTTTATGGATGCAT+GGG | 0.578062 | 5_4:-57611169 | Msa0859280:CDS |
| TGGACAGAAGCAAACTTCTG+AGG | 0.589514 | 5_4:+57611929 | None:intergenic |
| AAAAGCTTGCATGCAGCACA+AGG | 0.594669 | 5_4:+57612007 | None:intergenic |
| GCATGCAGCACAAGGAGTAG+TGG | 0.596320 | 5_4:+57612015 | None:intergenic |
| GTGGTGTTTAGTGTTCCTGA+AGG | 0.631434 | 5_4:+57612034 | None:intergenic |
| CACCTTCAACATCACTACCA+AGG | 0.661627 | 5_4:-57611009 | Msa0859280:CDS |
| AGCCTTGGTAGTGATGTTGA+AGG | 0.670441 | 5_4:+57611007 | None:intergenic |
| CTTGGTAGTGATGTTGAAGG+TGG | 0.715413 | 5_4:+57611010 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTAATTCATATATATTATA+TGG | - | chr5_4:57610955-57610974 | Msa0859280:CDS | 10.0% |
| !!! | AAATTGATAACAAAAAATTT+AGG | - | chr5_4:57611446-57611465 | Msa0859280:intron | 10.0% |
| !!! | AATTGATAACAAAAAATTTA+GGG | - | chr5_4:57611447-57611466 | Msa0859280:intron | 10.0% |
| !!! | TTAAACAACATTTTTTTAAT+CGG | + | chr5_4:57611533-57611552 | None:intergenic | 10.0% |
| !! | TTAAAAAATATTCTAATTAG+TGG | - | chr5_4:57611643-57611662 | Msa0859280:intron | 10.0% |
| !! | AAAAATTAAAAAAAATTGAG+AGG | + | chr5_4:57611717-57611736 | None:intergenic | 10.0% |
| !! | ACTAATTCATATATATTATA+TGG | - | chr5_4:57610955-57610974 | Msa0859280:CDS | 10.0% |
| !!! | AAATTGATAACAAAAAATTT+AGG | - | chr5_4:57611446-57611465 | Msa0859280:intron | 10.0% |
| !!! | AATTGATAACAAAAAATTTA+GGG | - | chr5_4:57611447-57611466 | Msa0859280:intron | 10.0% |
| !!! | TTAAACAACATTTTTTTAAT+CGG | + | chr5_4:57611533-57611552 | None:intergenic | 10.0% |
| !! | TTAAAAAATATTCTAATTAG+TGG | - | chr5_4:57611643-57611662 | Msa0859280:intron | 10.0% |
| !! | AAAAATTAAAAAAAATTGAG+AGG | + | chr5_4:57611717-57611736 | None:intergenic | 10.0% |
| !! | ATATGCTTTAATATCTATAT+AGG | - | chr5_4:57611054-57611073 | Msa0859280:CDS | 15.0% |
| !! | TATGCTTTAATATCTATATA+GGG | - | chr5_4:57611055-57611074 | Msa0859280:CDS | 15.0% |
| !! | ATATTTGTAATAATGAACTA+AGG | + | chr5_4:57611336-57611355 | None:intergenic | 15.0% |
| !!! | TTGATTTTATTTTAAGTCAA+TGG | - | chr5_4:57611389-57611408 | Msa0859280:intron | 15.0% |
| !!! | AAATAATTTGTTATTTAGAG+GGG | + | chr5_4:57611816-57611835 | None:intergenic | 15.0% |
| !!! | CAAATAATTTGTTATTTAGA+GGG | + | chr5_4:57611817-57611836 | None:intergenic | 15.0% |
| !!! | ACAAATAATTTGTTATTTAG+AGG | + | chr5_4:57611818-57611837 | None:intergenic | 15.0% |
| !! | AAAAAGTAACATTTGTAATA+TGG | - | chr5_4:57611908-57611927 | Msa0859280:CDS | 15.0% |
| !! | ATATGCTTTAATATCTATAT+AGG | - | chr5_4:57611054-57611073 | Msa0859280:CDS | 15.0% |
| !! | TATGCTTTAATATCTATATA+GGG | - | chr5_4:57611055-57611074 | Msa0859280:CDS | 15.0% |
| !! | ATATTTGTAATAATGAACTA+AGG | + | chr5_4:57611336-57611355 | None:intergenic | 15.0% |
| !!! | TTGATTTTATTTTAAGTCAA+TGG | - | chr5_4:57611389-57611408 | Msa0859280:intron | 15.0% |
| !!! | AAATAATTTGTTATTTAGAG+GGG | + | chr5_4:57611816-57611835 | None:intergenic | 15.0% |
| !!! | CAAATAATTTGTTATTTAGA+GGG | + | chr5_4:57611817-57611836 | None:intergenic | 15.0% |
| !!! | ACAAATAATTTGTTATTTAG+AGG | + | chr5_4:57611818-57611837 | None:intergenic | 15.0% |
| !! | AAAAAGTAACATTTGTAATA+TGG | - | chr5_4:57611908-57611927 | Msa0859280:CDS | 15.0% |
| !! | CAAAATATGGTTACAAAATT+TGG | + | chr5_4:57610767-57610786 | None:intergenic | 20.0% |
| !! | ATAAGAGTTAATTTATGGAA+AGG | + | chr5_4:57610837-57610856 | None:intergenic | 20.0% |
| !! | CATGTATAAGAGTTAATTTA+TGG | + | chr5_4:57610842-57610861 | None:intergenic | 20.0% |
| !!! | TTACAAATTTTTGACACATA+GGG | + | chr5_4:57610924-57610943 | None:intergenic | 20.0% |
| !!! | ATTACAAATTTTTGACACAT+AGG | + | chr5_4:57610925-57610944 | None:intergenic | 20.0% |
| !! | ATGCTTTAATATCTATATAG+GGG | - | chr5_4:57611056-57611075 | Msa0859280:CDS | 20.0% |
| !! | ATGGATATACATTATATAAG+AGG | - | chr5_4:57611408-57611427 | Msa0859280:intron | 20.0% |
| !! | TATACATTATATAAGAGGTT+TGG | - | chr5_4:57611413-57611432 | Msa0859280:intron | 20.0% |
| !! | TAATATGGTTGTGTTTAATT+AGG | - | chr5_4:57611923-57611942 | Msa0859280:CDS | 20.0% |
| !! | AATTCATAAATACAAACTCA+TGG | - | chr5_4:57612103-57612122 | Msa0859280:CDS | 20.0% |
| !! | CTTGCAAATTTAATCAAAAT+AGG | + | chr5_4:57612270-57612289 | None:intergenic | 20.0% |
| !! | AAAAGACTATATATTAGTCA+TGG | - | chr5_4:57612338-57612357 | Msa0859280:five_prime_UTR | 20.0% |
| !! | CAAAATATGGTTACAAAATT+TGG | + | chr5_4:57610767-57610786 | None:intergenic | 20.0% |
| !! | ATAAGAGTTAATTTATGGAA+AGG | + | chr5_4:57610837-57610856 | None:intergenic | 20.0% |
| !! | CATGTATAAGAGTTAATTTA+TGG | + | chr5_4:57610842-57610861 | None:intergenic | 20.0% |
| !!! | TTACAAATTTTTGACACATA+GGG | + | chr5_4:57610924-57610943 | None:intergenic | 20.0% |
| !!! | ATTACAAATTTTTGACACAT+AGG | + | chr5_4:57610925-57610944 | None:intergenic | 20.0% |
| !! | ATGCTTTAATATCTATATAG+GGG | - | chr5_4:57611056-57611075 | Msa0859280:CDS | 20.0% |
| !! | ATGGATATACATTATATAAG+AGG | - | chr5_4:57611408-57611427 | Msa0859280:intron | 20.0% |
| !! | TATACATTATATAAGAGGTT+TGG | - | chr5_4:57611413-57611432 | Msa0859280:intron | 20.0% |
| !! | TAATATGGTTGTGTTTAATT+AGG | - | chr5_4:57611923-57611942 | Msa0859280:CDS | 20.0% |
| !! | AATTCATAAATACAAACTCA+TGG | - | chr5_4:57612103-57612122 | Msa0859280:CDS | 20.0% |
| !! | CTTGCAAATTTAATCAAAAT+AGG | + | chr5_4:57612270-57612289 | None:intergenic | 20.0% |
| !! | AAAAGACTATATATTAGTCA+TGG | - | chr5_4:57612338-57612357 | Msa0859280:five_prime_UTR | 20.0% |
| ! | TATGGTTACAAAATTTGGTT+TGG | + | chr5_4:57610762-57610781 | None:intergenic | 25.0% |
| ! | GGAATTGAAGATACAAAATA+TGG | + | chr5_4:57610780-57610799 | None:intergenic | 25.0% |
| !! | AGTATTTTCTTACCTTTCTT+TGG | + | chr5_4:57610888-57610907 | None:intergenic | 25.0% |
| ! | TGCTTTAATATCTATATAGG+GGG | - | chr5_4:57611057-57611076 | Msa0859280:CDS | 25.0% |
| ! | TTGTAAGAGTCCTAAATTAT+TGG | + | chr5_4:57611497-57611516 | None:intergenic | 25.0% |
| !!! | AAATGGATTACTAAACAATG+TGG | - | chr5_4:57611602-57611621 | Msa0859280:intron | 25.0% |
| !!! | AATGGATTACTAAACAATGT+GGG | - | chr5_4:57611603-57611622 | Msa0859280:intron | 25.0% |
| ! | TAGTTTATGAAGCAAATGTA+AGG | - | chr5_4:57611985-57612004 | Msa0859280:CDS | 25.0% |
| !! | TTTTCCTGAAGATATATGAT+TGG | - | chr5_4:57612408-57612427 | Msa0859280:five_prime_UTR | 25.0% |
| ! | TATGGTTACAAAATTTGGTT+TGG | + | chr5_4:57610762-57610781 | None:intergenic | 25.0% |
| ! | GGAATTGAAGATACAAAATA+TGG | + | chr5_4:57610780-57610799 | None:intergenic | 25.0% |
| !! | AGTATTTTCTTACCTTTCTT+TGG | + | chr5_4:57610888-57610907 | None:intergenic | 25.0% |
| ! | TGCTTTAATATCTATATAGG+GGG | - | chr5_4:57611057-57611076 | Msa0859280:CDS | 25.0% |
| ! | TTGTAAGAGTCCTAAATTAT+TGG | + | chr5_4:57611497-57611516 | None:intergenic | 25.0% |
| !!! | AAATGGATTACTAAACAATG+TGG | - | chr5_4:57611602-57611621 | Msa0859280:intron | 25.0% |
| !!! | AATGGATTACTAAACAATGT+GGG | - | chr5_4:57611603-57611622 | Msa0859280:intron | 25.0% |
| ! | TAGTTTATGAAGCAAATGTA+AGG | - | chr5_4:57611985-57612004 | Msa0859280:CDS | 25.0% |
| !! | TTTTCCTGAAGATATATGAT+TGG | - | chr5_4:57612408-57612427 | Msa0859280:five_prime_UTR | 25.0% |
| ! | AAGGATAGATAGAGAAGTTT+TGG | + | chr5_4:57610818-57610837 | None:intergenic | 30.0% |
| ! | GGTGATGATTCTTTTCAAAA+GGG | - | chr5_4:57611113-57611132 | Msa0859280:CDS | 30.0% |
| AAGAGTCCTAAATTATTGGT+CGG | + | chr5_4:57611493-57611512 | None:intergenic | 30.0% | |
| ACTAAAATTCCCACATACAT+AGG | - | chr5_4:57611556-57611575 | Msa0859280:intron | 30.0% | |
| CTAAAATTCCCACATACATA+GGG | - | chr5_4:57611557-57611576 | Msa0859280:intron | 30.0% | |
| CTCATGAACTGATCAATATA+TGG | + | chr5_4:57611756-57611775 | None:intergenic | 30.0% | |
| CATATATTGATCAGTTCATG+AGG | - | chr5_4:57611754-57611773 | Msa0859280:intron | 30.0% | |
| ATATCGTCATGATCTAATTG+TGG | + | chr5_4:57611781-57611800 | None:intergenic | 30.0% | |
| TATGGTTGTGTTTAATTAGG+AGG | - | chr5_4:57611926-57611945 | Msa0859280:CDS | 30.0% | |
| CAACAAGTTCAATCATTACT+AGG | - | chr5_4:57612056-57612075 | Msa0859280:CDS | 30.0% | |
| ATTGATACATCATCTGAAGA+AGG | + | chr5_4:57612143-57612162 | None:intergenic | 30.0% | |
| TGTTGTGTGTAAATAGAAGA+AGG | + | chr5_4:57612203-57612222 | None:intergenic | 30.0% | |
| ACTTGAAATTGAGCTATAAC+TGG | + | chr5_4:57612237-57612256 | None:intergenic | 30.0% | |
| CTTTCCAATCATATATCTTC+AGG | + | chr5_4:57612415-57612434 | None:intergenic | 30.0% | |
| ! | AAGGATAGATAGAGAAGTTT+TGG | + | chr5_4:57610818-57610837 | None:intergenic | 30.0% |
| ! | GGTGATGATTCTTTTCAAAA+GGG | - | chr5_4:57611113-57611132 | Msa0859280:CDS | 30.0% |
| AAGAGTCCTAAATTATTGGT+CGG | + | chr5_4:57611493-57611512 | None:intergenic | 30.0% | |
| ACTAAAATTCCCACATACAT+AGG | - | chr5_4:57611556-57611575 | Msa0859280:intron | 30.0% | |
| CTAAAATTCCCACATACATA+GGG | - | chr5_4:57611557-57611576 | Msa0859280:intron | 30.0% | |
| CTCATGAACTGATCAATATA+TGG | + | chr5_4:57611756-57611775 | None:intergenic | 30.0% | |
| CATATATTGATCAGTTCATG+AGG | - | chr5_4:57611754-57611773 | Msa0859280:intron | 30.0% | |
| ATATCGTCATGATCTAATTG+TGG | + | chr5_4:57611781-57611800 | None:intergenic | 30.0% | |
| TATGGTTGTGTTTAATTAGG+AGG | - | chr5_4:57611926-57611945 | Msa0859280:CDS | 30.0% | |
| CAACAAGTTCAATCATTACT+AGG | - | chr5_4:57612056-57612075 | Msa0859280:CDS | 30.0% | |
| ATTGATACATCATCTGAAGA+AGG | + | chr5_4:57612143-57612162 | None:intergenic | 30.0% | |
| TGTTGTGTGTAAATAGAAGA+AGG | + | chr5_4:57612203-57612222 | None:intergenic | 30.0% | |
| ACTTGAAATTGAGCTATAAC+TGG | + | chr5_4:57612237-57612256 | None:intergenic | 30.0% | |
| CTTTCCAATCATATATCTTC+AGG | + | chr5_4:57612415-57612434 | None:intergenic | 30.0% | |
| !! | TTTGGTTTGGTGTGCTTAAA+AGG | + | chr5_4:57610749-57610768 | None:intergenic | 35.0% |
| !! | GATAGATAGAGAAGTTTTGG+AGG | + | chr5_4:57610815-57610834 | None:intergenic | 35.0% |
| TTACCTTTCTTTGGACATTC+AGG | + | chr5_4:57610879-57610898 | None:intergenic | 35.0% | |
| !!! | GGGAGATTTTTTGATGAGAT+AGG | - | chr5_4:57611077-57611096 | Msa0859280:CDS | 35.0% |
| ! | GGGTGATGATTCTTTTCAAA+AGG | - | chr5_4:57611112-57611131 | Msa0859280:CDS | 35.0% |
| GGAGAGAAATATGGAGAAAA+AGG | + | chr5_4:57611227-57611246 | None:intergenic | 35.0% | |
| CAACGTCTCAAAATTGCTAT+TGG | - | chr5_4:57611295-57611314 | Msa0859280:intron | 35.0% | |
| GATTTGCCGACCAATAATTT+AGG | - | chr5_4:57611484-57611503 | Msa0859280:intron | 35.0% | |
| ! | TTCTAATTAGTGGACCTTTG+AGG | - | chr5_4:57611653-57611672 | Msa0859280:intron | 35.0% |
| ATCTACCAAGTTAACCTCAA+AGG | + | chr5_4:57611670-57611689 | None:intergenic | 35.0% | |
| TAAATAGAAGAAGGAAGCCT+TGG | + | chr5_4:57612194-57612213 | None:intergenic | 35.0% | |
| GAAATTGAGCTATAACTGGT+AGG | + | chr5_4:57612233-57612252 | None:intergenic | 35.0% | |
| !! | TTTGGTTTGGTGTGCTTAAA+AGG | + | chr5_4:57610749-57610768 | None:intergenic | 35.0% |
| !! | GATAGATAGAGAAGTTTTGG+AGG | + | chr5_4:57610815-57610834 | None:intergenic | 35.0% |
| TTACCTTTCTTTGGACATTC+AGG | + | chr5_4:57610879-57610898 | None:intergenic | 35.0% | |
| !!! | GGGAGATTTTTTGATGAGAT+AGG | - | chr5_4:57611077-57611096 | Msa0859280:CDS | 35.0% |
| ! | GGGTGATGATTCTTTTCAAA+AGG | - | chr5_4:57611112-57611131 | Msa0859280:CDS | 35.0% |
| GGAGAGAAATATGGAGAAAA+AGG | + | chr5_4:57611227-57611246 | None:intergenic | 35.0% | |
| CAACGTCTCAAAATTGCTAT+TGG | - | chr5_4:57611295-57611314 | Msa0859280:intron | 35.0% | |
| GATTTGCCGACCAATAATTT+AGG | - | chr5_4:57611484-57611503 | Msa0859280:intron | 35.0% | |
| ! | TTCTAATTAGTGGACCTTTG+AGG | - | chr5_4:57611653-57611672 | Msa0859280:intron | 35.0% |
| ATCTACCAAGTTAACCTCAA+AGG | + | chr5_4:57611670-57611689 | None:intergenic | 35.0% | |
| TAAATAGAAGAAGGAAGCCT+TGG | + | chr5_4:57612194-57612213 | None:intergenic | 35.0% | |
| GAAATTGAGCTATAACTGGT+AGG | + | chr5_4:57612233-57612252 | None:intergenic | 35.0% | |
| !! | TTTTGGAGGAGAGTCAGAAA+GGG | + | chr5_4:57610801-57610820 | None:intergenic | 40.0% |
| ATGCCTGAATGTCCAAAGAA+AGG | - | chr5_4:57610873-57610892 | Msa0859280:three_prime_UTR | 40.0% | |
| TGAGATAGGAAAGAAGAGAG+AGG | - | chr5_4:57611091-57611110 | Msa0859280:CDS | 40.0% | |
| GAGATAGGAAAGAAGAGAGA+GGG | - | chr5_4:57611092-57611111 | Msa0859280:CDS | 40.0% | |
| GGAAGAATGTTAAGTCCTTC+AGG | - | chr5_4:57611134-57611153 | Msa0859280:CDS | 40.0% | |
| TGGAGAAAAAGGACATTCCT+GGG | + | chr5_4:57611216-57611235 | None:intergenic | 40.0% | |
| ATGGAGAAAAAGGACATTCC+TGG | + | chr5_4:57611217-57611236 | None:intergenic | 40.0% | |
| !!! | TAGCAATTTTGAGACGTTGC+TGG | + | chr5_4:57611294-57611313 | None:intergenic | 40.0% |
| TCCTTAGACCCTATGTATGT+GGG | + | chr5_4:57611568-57611587 | None:intergenic | 40.0% | |
| GGAGAGTCATAGTTGCTAAA+TGG | - | chr5_4:57611585-57611604 | Msa0859280:intron | 40.0% | |
| TGATCAAGTAGCTGCACATA+AGG | + | chr5_4:57611852-57611871 | None:intergenic | 40.0% | |
| AGGCTAAGAGATCCAGTTTA+TGG | - | chr5_4:57612005-57612024 | Msa0859280:CDS | 40.0% | |
| AGATCCAGTTTATGGATGCA+TGG | - | chr5_4:57612013-57612032 | Msa0859280:CDS | 40.0% | |
| GATCCAGTTTATGGATGCAT+GGG | - | chr5_4:57612014-57612033 | Msa0859280:CDS | 40.0% | |
| !! | TTTTGGAGGAGAGTCAGAAA+GGG | + | chr5_4:57610801-57610820 | None:intergenic | 40.0% |
| ATGCCTGAATGTCCAAAGAA+AGG | - | chr5_4:57610873-57610892 | Msa0859280:three_prime_UTR | 40.0% | |
| TGAGATAGGAAAGAAGAGAG+AGG | - | chr5_4:57611091-57611110 | Msa0859280:CDS | 40.0% | |
| GAGATAGGAAAGAAGAGAGA+GGG | - | chr5_4:57611092-57611111 | Msa0859280:CDS | 40.0% | |
| GGAAGAATGTTAAGTCCTTC+AGG | - | chr5_4:57611134-57611153 | Msa0859280:CDS | 40.0% | |
| TGGAGAAAAAGGACATTCCT+GGG | + | chr5_4:57611216-57611235 | None:intergenic | 40.0% | |
| ATGGAGAAAAAGGACATTCC+TGG | + | chr5_4:57611217-57611236 | None:intergenic | 40.0% | |
| !!! | TAGCAATTTTGAGACGTTGC+TGG | + | chr5_4:57611294-57611313 | None:intergenic | 40.0% |
| TCCTTAGACCCTATGTATGT+GGG | + | chr5_4:57611568-57611587 | None:intergenic | 40.0% | |
| GGAGAGTCATAGTTGCTAAA+TGG | - | chr5_4:57611585-57611604 | Msa0859280:intron | 40.0% | |
| TGATCAAGTAGCTGCACATA+AGG | + | chr5_4:57611852-57611871 | None:intergenic | 40.0% | |
| AGGCTAAGAGATCCAGTTTA+TGG | - | chr5_4:57612005-57612024 | Msa0859280:CDS | 40.0% | |
| AGATCCAGTTTATGGATGCA+TGG | - | chr5_4:57612013-57612032 | Msa0859280:CDS | 40.0% | |
| GATCCAGTTTATGGATGCAT+GGG | - | chr5_4:57612014-57612033 | Msa0859280:CDS | 40.0% | |
| !!! | GTTTTGGAGGAGAGTCAGAA+AGG | + | chr5_4:57610802-57610821 | None:intergenic | 45.0% |
| GTGGTGTTTAGTGTTCCTGA+AGG | + | chr5_4:57611152-57611171 | None:intergenic | 45.0% | |
| AAAAGCTTGCATGCAGCACA+AGG | + | chr5_4:57611179-57611198 | None:intergenic | 45.0% | |
| !!! | CATGCAAGCTTTTGAGACGA+AGG | - | chr5_4:57611186-57611205 | Msa0859280:CDS | 45.0% |
| GGCTCATGAGGAGAGAAATA+TGG | + | chr5_4:57611236-57611255 | None:intergenic | 45.0% | |
| TGGACAGAAGCAAACTTCTG+AGG | + | chr5_4:57611257-57611276 | None:intergenic | 45.0% | |
| GCTTCTGTCCACAAAGTCTT+TGG | - | chr5_4:57611266-57611285 | Msa0859280:intron | 45.0% | |
| TCCCACATACATAGGGTCTA+AGG | - | chr5_4:57611564-57611583 | Msa0859280:intron | 45.0% | |
| CTCCTTAGACCCTATGTATG+TGG | + | chr5_4:57611569-57611588 | None:intergenic | 45.0% | |
| !! | GTGGACCTTTGAGGTTAACT+TGG | - | chr5_4:57611662-57611681 | Msa0859280:intron | 45.0% |
| GCATCTGCTCTTTGATTCTC+TGG | + | chr5_4:57611954-57611973 | None:intergenic | 45.0% | |
| !! | CTTGGTAGTGATGTTGAAGG+TGG | + | chr5_4:57612176-57612195 | None:intergenic | 45.0% |
| CACCTTCAACATCACTACCA+AGG | - | chr5_4:57612174-57612193 | Msa0859280:intron | 45.0% | |
| !! | AGCCTTGGTAGTGATGTTGA+AGG | + | chr5_4:57612179-57612198 | None:intergenic | 45.0% |
| !!! | GTTTTGGAGGAGAGTCAGAA+AGG | + | chr5_4:57610802-57610821 | None:intergenic | 45.0% |
| GTGGTGTTTAGTGTTCCTGA+AGG | + | chr5_4:57611152-57611171 | None:intergenic | 45.0% | |
| AAAAGCTTGCATGCAGCACA+AGG | + | chr5_4:57611179-57611198 | None:intergenic | 45.0% | |
| !!! | CATGCAAGCTTTTGAGACGA+AGG | - | chr5_4:57611186-57611205 | Msa0859280:CDS | 45.0% |
| GGCTCATGAGGAGAGAAATA+TGG | + | chr5_4:57611236-57611255 | None:intergenic | 45.0% | |
| TGGACAGAAGCAAACTTCTG+AGG | + | chr5_4:57611257-57611276 | None:intergenic | 45.0% | |
| GCTTCTGTCCACAAAGTCTT+TGG | - | chr5_4:57611266-57611285 | Msa0859280:intron | 45.0% | |
| TCCCACATACATAGGGTCTA+AGG | - | chr5_4:57611564-57611583 | Msa0859280:intron | 45.0% | |
| CTCCTTAGACCCTATGTATG+TGG | + | chr5_4:57611569-57611588 | None:intergenic | 45.0% | |
| !! | GTGGACCTTTGAGGTTAACT+TGG | - | chr5_4:57611662-57611681 | Msa0859280:intron | 45.0% |
| GCATCTGCTCTTTGATTCTC+TGG | + | chr5_4:57611954-57611973 | None:intergenic | 45.0% | |
| !! | CTTGGTAGTGATGTTGAAGG+TGG | + | chr5_4:57612176-57612195 | None:intergenic | 45.0% |
| CACCTTCAACATCACTACCA+AGG | - | chr5_4:57612174-57612193 | Msa0859280:intron | 45.0% | |
| !! | AGCCTTGGTAGTGATGTTGA+AGG | + | chr5_4:57612179-57612198 | None:intergenic | 45.0% |
| !!! | TAATTAGAATATTTTTTAAA+AGG | + | chr5_4:57611642-57611661 | None:intergenic | 5.0% |
| !!! | TAATTAGAATATTTTTTAAA+AGG | + | chr5_4:57611642-57611661 | None:intergenic | 5.0% |
| !! | GCAAACTTCTGAGGCTCATG+AGG | + | chr5_4:57611248-57611267 | None:intergenic | 50.0% |
| TGCTGGCACCAAAGACTTTG+TGG | + | chr5_4:57611277-57611296 | None:intergenic | 50.0% | |
| GCACCCATGCATCCATAAAC+TGG | + | chr5_4:57612020-57612039 | None:intergenic | 50.0% | |
| !! | GCAAACTTCTGAGGCTCATG+AGG | + | chr5_4:57611248-57611267 | None:intergenic | 50.0% |
| TGCTGGCACCAAAGACTTTG+TGG | + | chr5_4:57611277-57611296 | None:intergenic | 50.0% | |
| GCACCCATGCATCCATAAAC+TGG | + | chr5_4:57612020-57612039 | None:intergenic | 50.0% | |
| GCATGCAGCACAAGGAGTAG+TGG | + | chr5_4:57611171-57611190 | None:intergenic | 55.0% | |
| ! | TTTGAGACGAAGGTGTGCCC+AGG | - | chr5_4:57611196-57611215 | Msa0859280:CDS | 55.0% |
| GCATGCAGCACAAGGAGTAG+TGG | + | chr5_4:57611171-57611190 | None:intergenic | 55.0% | |
| ! | TTTGAGACGAAGGTGTGCCC+AGG | - | chr5_4:57611196-57611215 | Msa0859280:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 57610745 | 57612460 | 57610745 | ID=Msa0859280;Name=Msa0859280 |
| chr5_4 | mRNA | 57610745 | 57612460 | 57610745 | ID=Msa0859280-mRNA-1;Parent=Msa0859280;Name=Msa0859280-mRNA-1;_AED=0.04;_eAED=0.04;_QI=136|1|1|1|1|1|3|180|196 |
| chr5_4 | exon | 57610745 | 57611260 | 57610745 | ID=Msa0859280-mRNA-1:exon:17544;Parent=Msa0859280-mRNA-1 |
| chr5_4 | exon | 57611889 | 57612129 | 57611889 | ID=Msa0859280-mRNA-1:exon:17543;Parent=Msa0859280-mRNA-1 |
| chr5_4 | exon | 57612311 | 57612460 | 57612311 | ID=Msa0859280-mRNA-1:exon:17542;Parent=Msa0859280-mRNA-1 |
| chr5_4 | five_prime_UTR | 57612325 | 57612460 | 57612325 | ID=Msa0859280-mRNA-1:five_prime_utr;Parent=Msa0859280-mRNA-1 |
| chr5_4 | CDS | 57612311 | 57612324 | 57612311 | ID=Msa0859280-mRNA-1:cds;Parent=Msa0859280-mRNA-1 |
| chr5_4 | CDS | 57611889 | 57612129 | 57611889 | ID=Msa0859280-mRNA-1:cds;Parent=Msa0859280-mRNA-1 |
| chr5_4 | CDS | 57610925 | 57611260 | 57610925 | ID=Msa0859280-mRNA-1:cds;Parent=Msa0859280-mRNA-1 |
| chr5_4 | three_prime_UTR | 57610745 | 57610924 | 57610745 | ID=Msa0859280-mRNA-1:three_prime_utr;Parent=Msa0859280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
