Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0861230 | AES92029.1 | 80.311 | 193 | 17 | 2 | 29 | 200 | 31 | 223 | 3.36e-107 | 317 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0861230 | G7JQ00 | 80.311 | 193 | 17 | 2 | 29 | 200 | 31 | 223 | 1.60e-107 | 317 |
Gene ID | Type | Classification |
---|---|---|
Msa0861230 | TF | B3 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0861230 | MtrunA17_Chr5g0393501 | 32.308 | 195 | 108 | 4 | 29 | 199 | 45 | 239 | 8.37e-28 | 105 |
Msa0861230 | MtrunA17_Chr4g0044671 | 27.222 | 180 | 110 | 2 | 29 | 187 | 28 | 207 | 4.26e-14 | 68.2 |
Msa0861230 | MtrunA17_Chr4g0034781 | 26.667 | 180 | 111 | 2 | 29 | 187 | 22 | 201 | 1.53e-13 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 53 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGATTTGCGATTTCCAATT+TGG | 0.147900 | 5_4:+60486711 | Msa0861230:CDS |
GGGTAAGGGGTTTGCGATTT+GGG | 0.160938 | 5_4:+60486669 | Msa0861230:CDS |
TCTCCTCCTCTTCCCCAAAT+TGG | 0.218227 | 5_4:-60486725 | None:intergenic |
TGGGTAAGGGGTTTGCGATT+TGG | 0.259010 | 5_4:+60486668 | Msa0861230:CDS |
AGATTTGCGATTTCCAATTT+GGG | 0.327058 | 5_4:+60486712 | Msa0861230:CDS |
CAAATTGGAAATCGCAAATC+TGG | 0.332402 | 5_4:-60486710 | None:intergenic |
AGGAATTTGCCGAAAGTATC+AGG | 0.335653 | 5_4:-60488866 | None:intergenic |
AATCGTGATGTTTCACTCTA+AGG | 0.341127 | 5_4:-60488886 | None:intergenic |
TAGGAACTACCTGATACTTT+CGG | 0.400617 | 5_4:+60488857 | Msa0861230:intron |
TCCGAACATCACATTTGGTA+TGG | 0.417548 | 5_4:-60488972 | None:intergenic |
ATCTACTTCCACCAAGGTAC+TGG | 0.428620 | 5_4:-60488605 | None:intergenic |
CGATTTCCAATTTGGGGAAG+AGG | 0.437138 | 5_4:+60486719 | Msa0861230:CDS |
GGGTTTGCGATTTGGGGAAG+AGG | 0.446038 | 5_4:+60486676 | Msa0861230:CDS |
CCGAACATCACATTTGGTAT+GGG | 0.451435 | 5_4:-60488971 | None:intergenic |
GAGCAATGGCACTTGCTAGA+TGG | 0.455163 | 5_4:+60488465 | Msa0861230:CDS |
TGCCGCACTCATGGAATGAT+AGG | 0.462626 | 5_4:-60488676 | None:intergenic |
TTGTGCTGCCAATGGTATTG+AGG | 0.463000 | 5_4:+60489012 | Msa0861230:CDS |
TATGTTCCAGAATTTGGGTA+AGG | 0.469282 | 5_4:+60486654 | None:intergenic |
CCAAATGTGATGTTCGGAAA+AGG | 0.475440 | 5_4:+60488977 | Msa0861230:CDS |
TAAATATTTGTACGAGCTAC+CGG | 0.476243 | 5_4:+60488443 | Msa0861230:CDS |
CCCATACCAAATGTGATGTT+CGG | 0.477035 | 5_4:+60488971 | Msa0861230:CDS |
ACACGATGCTGCCGCACTCA+TGG | 0.487735 | 5_4:-60488685 | None:intergenic |
TTTGCGATTTGGGGAAGAGG+TGG | 0.493792 | 5_4:+60486679 | Msa0861230:CDS |
TGTGCTGCCAATGGTATTGA+GGG | 0.501205 | 5_4:+60489013 | Msa0861230:CDS |
ATTATTGCTTTCCAGTACCT+TGG | 0.503165 | 5_4:+60488594 | Msa0861230:CDS |
TGTTCCAGAATTTGGGTAAG+GGG | 0.521801 | 5_4:+60486656 | None:intergenic |
ACGGAAATGATATTGTCATA+AGG | 0.522697 | 5_4:-60488926 | None:intergenic |
GGTAAGGGGTTTGCGATTTG+GGG | 0.534352 | 5_4:+60486670 | Msa0861230:CDS |
TCTAGCAAGTGCCATTGCTC+CGG | 0.534587 | 5_4:-60488462 | None:intergenic |
GATTTGCGATTTCCAATTTG+GGG | 0.537951 | 5_4:+60486713 | Msa0861230:CDS |
TGATAGGGTGGATAATCAGC+TGG | 0.541144 | 5_4:-60488660 | None:intergenic |
ATGTTCCAGAATTTGGGTAA+GGG | 0.545563 | 5_4:+60486655 | None:intergenic |
AGTCAGCCGTTGTTGACAGA+TGG | 0.548377 | 5_4:+60488528 | Msa0861230:CDS |
ATTGCTTTCCAGTACCTTGG+TGG | 0.549152 | 5_4:+60488597 | Msa0861230:CDS |
AGCCGTTGTTGACAGATGGT+TGG | 0.550734 | 5_4:+60488532 | Msa0861230:CDS |
CGAACATCACATTTGGTATG+GGG | 0.552019 | 5_4:-60488970 | None:intergenic |
TTTCAAGTGCAAGTGCGTCA+TGG | 0.567746 | 5_4:+60489051 | Msa0861230:CDS |
TTTCCAATTTGGGGAAGAGG+AGG | 0.577832 | 5_4:+60486722 | Msa0861230:CDS |
GTCTCCGCCCTCAATACCAT+TGG | 0.581950 | 5_4:-60489020 | None:intergenic |
ATTTGGGGAAGAGGAGGAGA+AGG | 0.584196 | 5_4:+60486728 | Msa0861230:CDS |
GTCTGTATATTTGAGTCTCA+CGG | 0.587084 | 5_4:-60488945 | None:intergenic |
TGGCACTTGCTAGATGGTGA+TGG | 0.587936 | 5_4:+60488471 | Msa0861230:CDS |
ATTTGGGGAAGAGGTGGAGA+AGG | 0.588798 | 5_4:+60486685 | Msa0861230:CDS |
TATCCAGATAGGAACTTCAA+AGG | 0.596572 | 5_4:-60488715 | None:intergenic |
ATGTGATGTTCGGAAAAGGT+TGG | 0.606400 | 5_4:+60488981 | Msa0861230:CDS |
GGCACTTGCTAGATGGTGAT+GGG | 0.608333 | 5_4:+60488472 | Msa0861230:CDS |
TGTACGAGCTACCGGAGCAA+TGG | 0.612121 | 5_4:+60488451 | Msa0861230:CDS |
GCCGCACTCATGGAATGATA+GGG | 0.629158 | 5_4:-60488675 | None:intergenic |
ACCCTATCATTCCATGAGTG+CGG | 0.640367 | 5_4:+60488674 | Msa0861230:CDS |
GCACTCATGGAATGATAGGG+TGG | 0.649652 | 5_4:-60488672 | None:intergenic |
TTTGAAATCTACTTCCACCA+AGG | 0.681040 | 5_4:-60488611 | None:intergenic |
CTCCAACCATCTGTCAACAA+CGG | 0.713268 | 5_4:-60488534 | None:intergenic |
GCTGCCAATGGTATTGAGGG+CGG | 0.739556 | 5_4:+60489016 | Msa0861230:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATAATCTTTTTTTAGTTA+AGG | + | chr5_4:60486983-60487002 | Msa0861230:intron | 10.0% |
!!! | AATAATCTTTTTTTAGTTAA+GGG | + | chr5_4:60486984-60487003 | Msa0861230:intron | 10.0% |
!!! | AAATAATCTTTTTTTAGTTA+AGG | + | chr5_4:60486983-60487002 | Msa0861230:intron | 10.0% |
!!! | AATAATCTTTTTTTAGTTAA+GGG | + | chr5_4:60486984-60487003 | Msa0861230:intron | 10.0% |
!!! | AAAAAACTTAAATGTTCTTT+TGG | + | chr5_4:60486802-60486821 | Msa0861230:intron | 15.0% |
!! | AAAATTCAAAAAAAACGTTA+GGG | - | chr5_4:60486904-60486923 | None:intergenic | 15.0% |
!! | AAAAATTCAAAAAAAACGTT+AGG | - | chr5_4:60486905-60486924 | None:intergenic | 15.0% |
!! | TAATACCAAAAATATAGTTA+AGG | + | chr5_4:60487014-60487033 | Msa0861230:intron | 15.0% |
!! | AATACCAAAAATATAGTTAA+GGG | + | chr5_4:60487015-60487034 | Msa0861230:intron | 15.0% |
!!! | TAAAATTCAATAATTTGTCT+AGG | + | chr5_4:60487333-60487352 | Msa0861230:intron | 15.0% |
!!! | TAGTTCTTTTTTTTTTTTTG+AGG | + | chr5_4:60487412-60487431 | Msa0861230:intron | 15.0% |
!! | TATATATGCTATGAAAAATA+GGG | - | chr5_4:60487589-60487608 | None:intergenic | 15.0% |
!! | ATATATATGCTATGAAAAAT+AGG | - | chr5_4:60487590-60487609 | None:intergenic | 15.0% |
!! | GTTTATATATGCTATAATAA+AGG | + | chr5_4:60488797-60488816 | Msa0861230:intron | 15.0% |
!!! | CAGATTTTTTTCTTTTTTTT+AGG | + | chr5_4:60488838-60488857 | Msa0861230:intron | 15.0% |
!!! | AAAAAACTTAAATGTTCTTT+TGG | + | chr5_4:60486802-60486821 | Msa0861230:intron | 15.0% |
!! | AAAATTCAAAAAAAACGTTA+GGG | - | chr5_4:60486904-60486923 | None:intergenic | 15.0% |
!! | AAAAATTCAAAAAAAACGTT+AGG | - | chr5_4:60486905-60486924 | None:intergenic | 15.0% |
!! | TAATACCAAAAATATAGTTA+AGG | + | chr5_4:60487014-60487033 | Msa0861230:intron | 15.0% |
!! | AATACCAAAAATATAGTTAA+GGG | + | chr5_4:60487015-60487034 | Msa0861230:intron | 15.0% |
!!! | TAAAATTCAATAATTTGTCT+AGG | + | chr5_4:60487333-60487352 | Msa0861230:intron | 15.0% |
!!! | TAGTTCTTTTTTTTTTTTTG+AGG | + | chr5_4:60487412-60487431 | Msa0861230:intron | 15.0% |
!! | TATATATGCTATGAAAAATA+GGG | - | chr5_4:60487589-60487608 | None:intergenic | 15.0% |
!! | ATATATATGCTATGAAAAAT+AGG | - | chr5_4:60487590-60487609 | None:intergenic | 15.0% |
!! | GTTTATATATGCTATAATAA+AGG | + | chr5_4:60488797-60488816 | Msa0861230:intron | 15.0% |
!!! | CAGATTTTTTTCTTTTTTTT+AGG | + | chr5_4:60488838-60488857 | Msa0861230:intron | 15.0% |
!! | GATACCAAATAAATACTTAA+GGG | - | chr5_4:60486829-60486848 | None:intergenic | 20.0% |
!!! | TTTTGAATTTATTTAACGGA+AGG | + | chr5_4:60486923-60486942 | Msa0861230:intron | 20.0% |
!! | TTTGAATTTATTTAACGGAA+GGG | + | chr5_4:60486924-60486943 | Msa0861230:intron | 20.0% |
!!! | CTATATTTTTGGTATTACTT+TGG | - | chr5_4:60487011-60487030 | None:intergenic | 20.0% |
!! | TAATTACACTCATTCAATTT+AGG | - | chr5_4:60487059-60487078 | None:intergenic | 20.0% |
!!! | TGATAATCAAAGCTATATTT+TGG | + | chr5_4:60487139-60487158 | Msa0861230:intron | 20.0% |
!!! | ATATTTTGAAGTTTGTGAAA+AGG | + | chr5_4:60487222-60487241 | Msa0861230:intron | 20.0% |
!!! | GACAAATTATTGAATTTTAG+TGG | - | chr5_4:60487332-60487351 | None:intergenic | 20.0% |
!! | ATTCTAGTCATATAAATCAT+TGG | + | chr5_4:60487680-60487699 | Msa0861230:intron | 20.0% |
!! | TTCTAGTCATATAAATCATT+GGG | + | chr5_4:60487681-60487700 | Msa0861230:intron | 20.0% |
!!! | GCTTTTATAATAAAGGATAA+GGG | - | chr5_4:60487726-60487745 | None:intergenic | 20.0% |
!!! | AGCTTTTATAATAAAGGATA+AGG | - | chr5_4:60487727-60487746 | None:intergenic | 20.0% |
!!! | AAGTCTAGCTTTTATAATAA+AGG | - | chr5_4:60487733-60487752 | None:intergenic | 20.0% |
!! | ATATCAAATGCAATTAAAGT+CGG | + | chr5_4:60487941-60487960 | Msa0861230:intron | 20.0% |
!! | TTAACTTTAGTGGTAAAATT+TGG | - | chr5_4:60488188-60488207 | None:intergenic | 20.0% |
!! | TTTCTATTTAAATACGATGA+AGG | + | chr5_4:60488269-60488288 | Msa0861230:intron | 20.0% |
!! | TTCTATTTAAATACGATGAA+GGG | + | chr5_4:60488270-60488289 | Msa0861230:intron | 20.0% |
!! | TTAGACAGTGTATTAAAAAA+AGG | - | chr5_4:60488385-60488404 | None:intergenic | 20.0% |
!! | AAAAAACAATAAACAACCTT+CGG | - | chr5_4:60488757-60488776 | None:intergenic | 20.0% |
!! | GATACCAAATAAATACTTAA+GGG | - | chr5_4:60486829-60486848 | None:intergenic | 20.0% |
!!! | TTTTGAATTTATTTAACGGA+AGG | + | chr5_4:60486923-60486942 | Msa0861230:intron | 20.0% |
!! | TTTGAATTTATTTAACGGAA+GGG | + | chr5_4:60486924-60486943 | Msa0861230:intron | 20.0% |
!!! | CTATATTTTTGGTATTACTT+TGG | - | chr5_4:60487011-60487030 | None:intergenic | 20.0% |
!! | TAATTACACTCATTCAATTT+AGG | - | chr5_4:60487059-60487078 | None:intergenic | 20.0% |
!!! | TGATAATCAAAGCTATATTT+TGG | + | chr5_4:60487139-60487158 | Msa0861230:intron | 20.0% |
!!! | ATATTTTGAAGTTTGTGAAA+AGG | + | chr5_4:60487222-60487241 | Msa0861230:intron | 20.0% |
!!! | GACAAATTATTGAATTTTAG+TGG | - | chr5_4:60487332-60487351 | None:intergenic | 20.0% |
!! | ATTCTAGTCATATAAATCAT+TGG | + | chr5_4:60487680-60487699 | Msa0861230:intron | 20.0% |
!! | TTCTAGTCATATAAATCATT+GGG | + | chr5_4:60487681-60487700 | Msa0861230:intron | 20.0% |
!!! | GCTTTTATAATAAAGGATAA+GGG | - | chr5_4:60487726-60487745 | None:intergenic | 20.0% |
!!! | AGCTTTTATAATAAAGGATA+AGG | - | chr5_4:60487727-60487746 | None:intergenic | 20.0% |
!!! | AAGTCTAGCTTTTATAATAA+AGG | - | chr5_4:60487733-60487752 | None:intergenic | 20.0% |
!! | ATATCAAATGCAATTAAAGT+CGG | + | chr5_4:60487941-60487960 | Msa0861230:intron | 20.0% |
!! | TTAACTTTAGTGGTAAAATT+TGG | - | chr5_4:60488188-60488207 | None:intergenic | 20.0% |
!! | TTTCTATTTAAATACGATGA+AGG | + | chr5_4:60488269-60488288 | Msa0861230:intron | 20.0% |
!! | TTCTATTTAAATACGATGAA+GGG | + | chr5_4:60488270-60488289 | Msa0861230:intron | 20.0% |
!! | TTAGACAGTGTATTAAAAAA+AGG | - | chr5_4:60488385-60488404 | None:intergenic | 20.0% |
!! | AAAAAACAATAAACAACCTT+CGG | - | chr5_4:60488757-60488776 | None:intergenic | 20.0% |
! | CGATACCAAATAAATACTTA+AGG | - | chr5_4:60486830-60486849 | None:intergenic | 25.0% |
!! | GTATTTATTTGGTATCGTTT+TGG | + | chr5_4:60486833-60486852 | Msa0861230:intron | 25.0% |
! | TTGAATGAGTGTAATTATAG+AGG | + | chr5_4:60487062-60487081 | Msa0861230:intron | 25.0% |
!! | AGCAAATATTAGTCTCATTA+GGG | - | chr5_4:60487522-60487541 | None:intergenic | 25.0% |
! | TAATATTTGCTCAAGTACTT+CGG | + | chr5_4:60487531-60487550 | Msa0861230:intron | 25.0% |
! | TCATATAAATCATTGGGAAT+AGG | + | chr5_4:60487687-60487706 | Msa0861230:intron | 25.0% |
! | TTAGTCATTAGTACATGTTT+AGG | - | chr5_4:60487818-60487837 | None:intergenic | 25.0% |
! | TTTGATTAGCAATTAGTGTA+GGG | - | chr5_4:60487976-60487995 | None:intergenic | 25.0% |
!!! | TTTTGATTAGCAATTAGTGT+AGG | - | chr5_4:60487977-60487996 | None:intergenic | 25.0% |
!! | ATGTGCATGAAAATAACTTT+TGG | + | chr5_4:60488309-60488328 | Msa0861230:intron | 25.0% |
!! | TTTTGATGCTATTCATTTAG+AGG | + | chr5_4:60488775-60488794 | Msa0861230:intron | 25.0% |
! | CGATACCAAATAAATACTTA+AGG | - | chr5_4:60486830-60486849 | None:intergenic | 25.0% |
!! | GTATTTATTTGGTATCGTTT+TGG | + | chr5_4:60486833-60486852 | Msa0861230:intron | 25.0% |
! | TTGAATGAGTGTAATTATAG+AGG | + | chr5_4:60487062-60487081 | Msa0861230:intron | 25.0% |
!! | AGCAAATATTAGTCTCATTA+GGG | - | chr5_4:60487522-60487541 | None:intergenic | 25.0% |
! | TAATATTTGCTCAAGTACTT+CGG | + | chr5_4:60487531-60487550 | Msa0861230:intron | 25.0% |
! | TCATATAAATCATTGGGAAT+AGG | + | chr5_4:60487687-60487706 | Msa0861230:intron | 25.0% |
! | TTAGTCATTAGTACATGTTT+AGG | - | chr5_4:60487818-60487837 | None:intergenic | 25.0% |
! | TTTGATTAGCAATTAGTGTA+GGG | - | chr5_4:60487976-60487995 | None:intergenic | 25.0% |
!!! | TTTTGATTAGCAATTAGTGT+AGG | - | chr5_4:60487977-60487996 | None:intergenic | 25.0% |
!! | ATGTGCATGAAAATAACTTT+TGG | + | chr5_4:60488309-60488328 | Msa0861230:intron | 25.0% |
!! | TTTTGATGCTATTCATTTAG+AGG | + | chr5_4:60488775-60488794 | Msa0861230:intron | 25.0% |
AGATTTGCGATTTCCAATTT+GGG | + | chr5_4:60486712-60486731 | Msa0861230:CDS | 30.0% | |
TGGTCCCTTAAGTATTTATT+TGG | + | chr5_4:60486822-60486841 | Msa0861230:intron | 30.0% | |
! | TGGTCCCTTAACTATATTTT+TGG | - | chr5_4:60487022-60487041 | None:intergenic | 30.0% |
! | TTTAGGCTTAAATGCGTTTT+TGG | - | chr5_4:60487042-60487061 | None:intergenic | 30.0% |
ATTTCTCTTTCCTCTTACTT+CGG | - | chr5_4:60487113-60487132 | None:intergenic | 30.0% | |
!!! | AGCTATATTTTGGTGCAAAA+TGG | + | chr5_4:60487149-60487168 | Msa0861230:intron | 30.0% |
AGAAAATCTAGAGAGTCATA+GGG | - | chr5_4:60487474-60487493 | None:intergenic | 30.0% | |
! | AATATTAGTCTCATTAGGGA+GGG | - | chr5_4:60487518-60487537 | None:intergenic | 30.0% |
! | AAATATTAGTCTCATTAGGG+AGG | - | chr5_4:60487519-60487538 | None:intergenic | 30.0% |
! | GAGCAAATATTAGTCTCATT+AGG | - | chr5_4:60487523-60487542 | None:intergenic | 30.0% |
TATGCTATGAAAAATAGGGA+TGG | - | chr5_4:60487585-60487604 | None:intergenic | 30.0% | |
AATCATTGGGAATAGGAAAA+TGG | + | chr5_4:60487694-60487713 | Msa0861230:intron | 30.0% | |
! | TTATAAAAGCTAGACTTGCT+TGG | + | chr5_4:60487736-60487755 | Msa0861230:intron | 30.0% |
TCATTAGTACATGTTTAGGA+GGG | - | chr5_4:60487814-60487833 | None:intergenic | 30.0% | |
!! | ATTGTTAGGCTTTGAATCAA+CGG | - | chr5_4:60487885-60487904 | None:intergenic | 30.0% |
!! | TATTATGAGAGAGCATTGTT+AGG | - | chr5_4:60487899-60487918 | None:intergenic | 30.0% |
TTGATTAGCAATTAGTGTAG+GGG | - | chr5_4:60487975-60487994 | None:intergenic | 30.0% | |
!!! | GTACGAAGAACACTTTTTTA+AGG | - | chr5_4:60488069-60488088 | None:intergenic | 30.0% |
ATCTTCCTATCACTCTATTT+CGG | - | chr5_4:60488141-60488160 | None:intergenic | 30.0% | |
ATAGGAAGATATGCGTTTAA+AGG | + | chr5_4:60488151-60488170 | Msa0861230:intron | 30.0% | |
! | GAACGAACATTTAACTTTAG+TGG | - | chr5_4:60488198-60488217 | None:intergenic | 30.0% |
! | GCATGAAAATAACTTTTGGT+TGG | + | chr5_4:60488313-60488332 | Msa0861230:intron | 30.0% |
TAATACACTGTCTAACTTCT+TGG | + | chr5_4:60488390-60488409 | Msa0861230:intron | 30.0% | |
TAAATATTTGTACGAGCTAC+CGG | + | chr5_4:60488443-60488462 | Msa0861230:CDS | 30.0% | |
ACGGAAATGATATTGTCATA+AGG | - | chr5_4:60488929-60488948 | None:intergenic | 30.0% | |
AGATTTGCGATTTCCAATTT+GGG | + | chr5_4:60486712-60486731 | Msa0861230:CDS | 30.0% | |
TGGTCCCTTAAGTATTTATT+TGG | + | chr5_4:60486822-60486841 | Msa0861230:intron | 30.0% | |
! | TGGTCCCTTAACTATATTTT+TGG | - | chr5_4:60487022-60487041 | None:intergenic | 30.0% |
! | TTTAGGCTTAAATGCGTTTT+TGG | - | chr5_4:60487042-60487061 | None:intergenic | 30.0% |
ATTTCTCTTTCCTCTTACTT+CGG | - | chr5_4:60487113-60487132 | None:intergenic | 30.0% | |
!!! | AGCTATATTTTGGTGCAAAA+TGG | + | chr5_4:60487149-60487168 | Msa0861230:intron | 30.0% |
AGAAAATCTAGAGAGTCATA+GGG | - | chr5_4:60487474-60487493 | None:intergenic | 30.0% | |
! | AATATTAGTCTCATTAGGGA+GGG | - | chr5_4:60487518-60487537 | None:intergenic | 30.0% |
! | AAATATTAGTCTCATTAGGG+AGG | - | chr5_4:60487519-60487538 | None:intergenic | 30.0% |
! | GAGCAAATATTAGTCTCATT+AGG | - | chr5_4:60487523-60487542 | None:intergenic | 30.0% |
TATGCTATGAAAAATAGGGA+TGG | - | chr5_4:60487585-60487604 | None:intergenic | 30.0% | |
AATCATTGGGAATAGGAAAA+TGG | + | chr5_4:60487694-60487713 | Msa0861230:intron | 30.0% | |
! | TTATAAAAGCTAGACTTGCT+TGG | + | chr5_4:60487736-60487755 | Msa0861230:intron | 30.0% |
TCATTAGTACATGTTTAGGA+GGG | - | chr5_4:60487814-60487833 | None:intergenic | 30.0% | |
!! | ATTGTTAGGCTTTGAATCAA+CGG | - | chr5_4:60487885-60487904 | None:intergenic | 30.0% |
!! | TATTATGAGAGAGCATTGTT+AGG | - | chr5_4:60487899-60487918 | None:intergenic | 30.0% |
TTGATTAGCAATTAGTGTAG+GGG | - | chr5_4:60487975-60487994 | None:intergenic | 30.0% | |
!!! | GTACGAAGAACACTTTTTTA+AGG | - | chr5_4:60488069-60488088 | None:intergenic | 30.0% |
ATCTTCCTATCACTCTATTT+CGG | - | chr5_4:60488141-60488160 | None:intergenic | 30.0% | |
ATAGGAAGATATGCGTTTAA+AGG | + | chr5_4:60488151-60488170 | Msa0861230:intron | 30.0% | |
! | GAACGAACATTTAACTTTAG+TGG | - | chr5_4:60488198-60488217 | None:intergenic | 30.0% |
! | GCATGAAAATAACTTTTGGT+TGG | + | chr5_4:60488313-60488332 | Msa0861230:intron | 30.0% |
TAATACACTGTCTAACTTCT+TGG | + | chr5_4:60488390-60488409 | Msa0861230:intron | 30.0% | |
TAAATATTTGTACGAGCTAC+CGG | + | chr5_4:60488443-60488462 | Msa0861230:CDS | 30.0% | |
ACGGAAATGATATTGTCATA+AGG | - | chr5_4:60488929-60488948 | None:intergenic | 30.0% | |
CAAATTGGAAATCGCAAATC+TGG | - | chr5_4:60486713-60486732 | None:intergenic | 35.0% | |
CAGATTTGCGATTTCCAATT+TGG | + | chr5_4:60486711-60486730 | Msa0861230:CDS | 35.0% | |
GATTTGCGATTTCCAATTTG+GGG | + | chr5_4:60486713-60486732 | Msa0861230:CDS | 35.0% | |
! | TTTATCTCCGTTACCTGTTT+TGG | - | chr5_4:60486951-60486970 | None:intergenic | 35.0% |
GAGAAAATCTAGAGAGTCAT+AGG | - | chr5_4:60487475-60487494 | None:intergenic | 35.0% | |
! | AACTTAAAGCTTTGGTCACT+TGG | + | chr5_4:60487558-60487577 | Msa0861230:intron | 35.0% |
TTTAGGAGGGAAAAATGCTA+GGG | - | chr5_4:60487801-60487820 | None:intergenic | 35.0% | |
GTCATTAGTACATGTTTAGG+AGG | - | chr5_4:60487815-60487834 | None:intergenic | 35.0% | |
GTGTGAAAATAGAGGTTGAA+CGG | - | chr5_4:60487852-60487871 | None:intergenic | 35.0% | |
GTGATCAAGTGTGAAAATAG+AGG | - | chr5_4:60487860-60487879 | None:intergenic | 35.0% | |
!! | TTGTTAGGCTTTGAATCAAC+GGG | - | chr5_4:60487884-60487903 | None:intergenic | 35.0% |
TCTCGGATAACACTTTCTAA+GGG | - | chr5_4:60488013-60488032 | None:intergenic | 35.0% | |
ATCTCGGATAACACTTTCTA+AGG | - | chr5_4:60488014-60488033 | None:intergenic | 35.0% | |
ATTATTGCTTTCCAGTACCT+TGG | + | chr5_4:60488594-60488613 | Msa0861230:CDS | 35.0% | |
! | TTTGAAATCTACTTCCACCA+AGG | - | chr5_4:60488614-60488633 | None:intergenic | 35.0% |
TATCCAGATAGGAACTTCAA+AGG | - | chr5_4:60488718-60488737 | None:intergenic | 35.0% | |
TTGAAGTTCCTATCTGGATA+TGG | + | chr5_4:60488718-60488737 | Msa0861230:intron | 35.0% | |
TAGGAACTACCTGATACTTT+CGG | + | chr5_4:60488857-60488876 | Msa0861230:intron | 35.0% | |
AATCGTGATGTTTCACTCTA+AGG | - | chr5_4:60488889-60488908 | None:intergenic | 35.0% | |
GTCTGTATATTTGAGTCTCA+CGG | - | chr5_4:60488948-60488967 | None:intergenic | 35.0% | |
CAAATTGGAAATCGCAAATC+TGG | - | chr5_4:60486713-60486732 | None:intergenic | 35.0% | |
CAGATTTGCGATTTCCAATT+TGG | + | chr5_4:60486711-60486730 | Msa0861230:CDS | 35.0% | |
GATTTGCGATTTCCAATTTG+GGG | + | chr5_4:60486713-60486732 | Msa0861230:CDS | 35.0% | |
! | TTTATCTCCGTTACCTGTTT+TGG | - | chr5_4:60486951-60486970 | None:intergenic | 35.0% |
GAGAAAATCTAGAGAGTCAT+AGG | - | chr5_4:60487475-60487494 | None:intergenic | 35.0% | |
! | AACTTAAAGCTTTGGTCACT+TGG | + | chr5_4:60487558-60487577 | Msa0861230:intron | 35.0% |
TTTAGGAGGGAAAAATGCTA+GGG | - | chr5_4:60487801-60487820 | None:intergenic | 35.0% | |
GTCATTAGTACATGTTTAGG+AGG | - | chr5_4:60487815-60487834 | None:intergenic | 35.0% | |
GTGTGAAAATAGAGGTTGAA+CGG | - | chr5_4:60487852-60487871 | None:intergenic | 35.0% | |
GTGATCAAGTGTGAAAATAG+AGG | - | chr5_4:60487860-60487879 | None:intergenic | 35.0% | |
!! | TTGTTAGGCTTTGAATCAAC+GGG | - | chr5_4:60487884-60487903 | None:intergenic | 35.0% |
TCTCGGATAACACTTTCTAA+GGG | - | chr5_4:60488013-60488032 | None:intergenic | 35.0% | |
ATCTCGGATAACACTTTCTA+AGG | - | chr5_4:60488014-60488033 | None:intergenic | 35.0% | |
ATTATTGCTTTCCAGTACCT+TGG | + | chr5_4:60488594-60488613 | Msa0861230:CDS | 35.0% | |
! | TTTGAAATCTACTTCCACCA+AGG | - | chr5_4:60488614-60488633 | None:intergenic | 35.0% |
TATCCAGATAGGAACTTCAA+AGG | - | chr5_4:60488718-60488737 | None:intergenic | 35.0% | |
TTGAAGTTCCTATCTGGATA+TGG | + | chr5_4:60488718-60488737 | Msa0861230:intron | 35.0% | |
TAGGAACTACCTGATACTTT+CGG | + | chr5_4:60488857-60488876 | Msa0861230:intron | 35.0% | |
AATCGTGATGTTTCACTCTA+AGG | - | chr5_4:60488889-60488908 | None:intergenic | 35.0% | |
GTCTGTATATTTGAGTCTCA+CGG | - | chr5_4:60488948-60488967 | None:intergenic | 35.0% | |
!! | ATCGTTTTGGTCCCAAAATC+TGG | + | chr5_4:60486846-60486865 | Msa0861230:intron | 40.0% |
!! | TCGTTTTGGTCCCAAAATCT+GGG | + | chr5_4:60486847-60486866 | Msa0861230:intron | 40.0% |
! | AACACACCAACCCAGATTTT+GGG | - | chr5_4:60486860-60486879 | None:intergenic | 40.0% |
TTACTTCGGAGAAGATGAAG+GGG | - | chr5_4:60487099-60487118 | None:intergenic | 40.0% | |
CTTACTTCGGAGAAGATGAA+GGG | - | chr5_4:60487100-60487119 | None:intergenic | 40.0% | |
TCTTACTTCGGAGAAGATGA+AGG | - | chr5_4:60487101-60487120 | None:intergenic | 40.0% | |
TTCATCTTCTCCGAAGTAAG+AGG | + | chr5_4:60487100-60487119 | Msa0861230:intron | 40.0% | |
TCGGTTGCAACTTAAAGCTT+TGG | + | chr5_4:60487550-60487569 | Msa0861230:intron | 40.0% | |
TCTGAAGAGAAGAGAAGTGA+AGG | - | chr5_4:60487623-60487642 | None:intergenic | 40.0% | |
GGGCAAAGAATGGTGAATTA+GGG | - | chr5_4:60487774-60487793 | None:intergenic | 40.0% | |
AGGGCAAAGAATGGTGAATT+AGG | - | chr5_4:60487775-60487794 | None:intergenic | 40.0% | |
GGGAAAAATGCTAGGGATTA+GGG | - | chr5_4:60487794-60487813 | None:intergenic | 40.0% | |
AGGGAAAAATGCTAGGGATT+AGG | - | chr5_4:60487795-60487814 | None:intergenic | 40.0% | |
GTTTAGGAGGGAAAAATGCT+AGG | - | chr5_4:60487802-60487821 | None:intergenic | 40.0% | |
GTTATCCGAGATAGAGTGAT+AGG | + | chr5_4:60488022-60488041 | Msa0861230:intron | 40.0% | |
TTCCTCCTATCACTCTATCT+CGG | - | chr5_4:60488030-60488049 | None:intergenic | 40.0% | |
GCTATCCGAAATAGAGTGAT+AGG | + | chr5_4:60488133-60488152 | Msa0861230:intron | 40.0% | |
CACAGTGCATGTAGAAAATC+AGG | + | chr5_4:60488220-60488239 | Msa0861230:intron | 40.0% | |
!! | GTACCTTTGAAGTTCCTATC+TGG | + | chr5_4:60488712-60488731 | Msa0861230:intron | 40.0% |
!! | AGGAATTTGCCGAAAGTATC+AGG | - | chr5_4:60488869-60488888 | None:intergenic | 40.0% |
CGAACATCACATTTGGTATG+GGG | - | chr5_4:60488973-60488992 | None:intergenic | 40.0% | |
CCGAACATCACATTTGGTAT+GGG | - | chr5_4:60488974-60488993 | None:intergenic | 40.0% | |
CCCATACCAAATGTGATGTT+CGG | + | chr5_4:60488971-60488990 | Msa0861230:CDS | 40.0% | |
TCCGAACATCACATTTGGTA+TGG | - | chr5_4:60488975-60488994 | None:intergenic | 40.0% | |
! | CCTTTTCCGAACATCACATT+TGG | - | chr5_4:60488980-60488999 | None:intergenic | 40.0% |
CCAAATGTGATGTTCGGAAA+AGG | + | chr5_4:60488977-60488996 | Msa0861230:CDS | 40.0% | |
ATGTGATGTTCGGAAAAGGT+TGG | + | chr5_4:60488981-60489000 | Msa0861230:CDS | 40.0% | |
!! | ATCGTTTTGGTCCCAAAATC+TGG | + | chr5_4:60486846-60486865 | Msa0861230:intron | 40.0% |
!! | TCGTTTTGGTCCCAAAATCT+GGG | + | chr5_4:60486847-60486866 | Msa0861230:intron | 40.0% |
! | AACACACCAACCCAGATTTT+GGG | - | chr5_4:60486860-60486879 | None:intergenic | 40.0% |
TTACTTCGGAGAAGATGAAG+GGG | - | chr5_4:60487099-60487118 | None:intergenic | 40.0% | |
CTTACTTCGGAGAAGATGAA+GGG | - | chr5_4:60487100-60487119 | None:intergenic | 40.0% | |
TCTTACTTCGGAGAAGATGA+AGG | - | chr5_4:60487101-60487120 | None:intergenic | 40.0% | |
TTCATCTTCTCCGAAGTAAG+AGG | + | chr5_4:60487100-60487119 | Msa0861230:intron | 40.0% | |
TCGGTTGCAACTTAAAGCTT+TGG | + | chr5_4:60487550-60487569 | Msa0861230:intron | 40.0% | |
TCTGAAGAGAAGAGAAGTGA+AGG | - | chr5_4:60487623-60487642 | None:intergenic | 40.0% | |
GGGCAAAGAATGGTGAATTA+GGG | - | chr5_4:60487774-60487793 | None:intergenic | 40.0% | |
AGGGCAAAGAATGGTGAATT+AGG | - | chr5_4:60487775-60487794 | None:intergenic | 40.0% | |
GGGAAAAATGCTAGGGATTA+GGG | - | chr5_4:60487794-60487813 | None:intergenic | 40.0% | |
AGGGAAAAATGCTAGGGATT+AGG | - | chr5_4:60487795-60487814 | None:intergenic | 40.0% | |
GTTTAGGAGGGAAAAATGCT+AGG | - | chr5_4:60487802-60487821 | None:intergenic | 40.0% | |
GTTATCCGAGATAGAGTGAT+AGG | + | chr5_4:60488022-60488041 | Msa0861230:intron | 40.0% | |
TTCCTCCTATCACTCTATCT+CGG | - | chr5_4:60488030-60488049 | None:intergenic | 40.0% | |
GCTATCCGAAATAGAGTGAT+AGG | + | chr5_4:60488133-60488152 | Msa0861230:intron | 40.0% | |
CACAGTGCATGTAGAAAATC+AGG | + | chr5_4:60488220-60488239 | Msa0861230:intron | 40.0% | |
!! | GTACCTTTGAAGTTCCTATC+TGG | + | chr5_4:60488712-60488731 | Msa0861230:intron | 40.0% |
!! | AGGAATTTGCCGAAAGTATC+AGG | - | chr5_4:60488869-60488888 | None:intergenic | 40.0% |
CGAACATCACATTTGGTATG+GGG | - | chr5_4:60488973-60488992 | None:intergenic | 40.0% | |
CCGAACATCACATTTGGTAT+GGG | - | chr5_4:60488974-60488993 | None:intergenic | 40.0% | |
CCCATACCAAATGTGATGTT+CGG | + | chr5_4:60488971-60488990 | Msa0861230:CDS | 40.0% | |
TCCGAACATCACATTTGGTA+TGG | - | chr5_4:60488975-60488994 | None:intergenic | 40.0% | |
! | CCTTTTCCGAACATCACATT+TGG | - | chr5_4:60488980-60488999 | None:intergenic | 40.0% |
CCAAATGTGATGTTCGGAAA+AGG | + | chr5_4:60488977-60488996 | Msa0861230:CDS | 40.0% | |
ATGTGATGTTCGGAAAAGGT+TGG | + | chr5_4:60488981-60489000 | Msa0861230:CDS | 40.0% | |
CGATTTCCAATTTGGGGAAG+AGG | + | chr5_4:60486719-60486738 | Msa0861230:CDS | 45.0% | |
TTTCCAATTTGGGGAAGAGG+AGG | + | chr5_4:60486722-60486741 | Msa0861230:CDS | 45.0% | |
TTTGGTCCCAAAATCTGGGT+TGG | + | chr5_4:60486851-60486870 | Msa0861230:intron | 45.0% | |
! | CAACACACCAACCCAGATTT+TGG | - | chr5_4:60486861-60486880 | None:intergenic | 45.0% |
TTAACGGAAGGGACCAAAAC+AGG | + | chr5_4:60486935-60486954 | Msa0861230:intron | 45.0% | |
GAAGGGACCAAAACAGGTAA+CGG | + | chr5_4:60486941-60486960 | Msa0861230:intron | 45.0% | |
ATCTAGAGAGTCATAGGGTG+TGG | - | chr5_4:60487469-60487488 | None:intergenic | 45.0% | |
GGTCAAGTGAACAAAGCTTG+TGG | - | chr5_4:60487497-60487516 | None:intergenic | 45.0% | |
CTAGGGATTAGGGCAAAGAA+TGG | - | chr5_4:60487784-60487803 | None:intergenic | 45.0% | |
ATCCGAGATAGAGTGATAGG+AGG | + | chr5_4:60488025-60488044 | Msa0861230:intron | 45.0% | |
CTCCAACCATCTGTCAACAA+CGG | - | chr5_4:60488537-60488556 | None:intergenic | 45.0% | |
ATTGCTTTCCAGTACCTTGG+TGG | + | chr5_4:60488597-60488616 | Msa0861230:CDS | 45.0% | |
ATCTACTTCCACCAAGGTAC+TGG | - | chr5_4:60488608-60488627 | None:intergenic | 45.0% | |
TGATAGGGTGGATAATCAGC+TGG | - | chr5_4:60488663-60488682 | None:intergenic | 45.0% | |
ACCCTATCATTCCATGAGTG+CGG | + | chr5_4:60488674-60488693 | Msa0861230:CDS | 45.0% | |
TCGTCGATCCATATCCAGAT+AGG | - | chr5_4:60488729-60488748 | None:intergenic | 45.0% | |
! | ACGAGTTTTTGTGCTGCCAA+TGG | + | chr5_4:60489004-60489023 | Msa0861230:CDS | 45.0% |
TTGTGCTGCCAATGGTATTG+AGG | + | chr5_4:60489012-60489031 | Msa0861230:CDS | 45.0% | |
! | TGTGCTGCCAATGGTATTGA+GGG | + | chr5_4:60489013-60489032 | Msa0861230:CDS | 45.0% |
! | TTTCAAGTGCAAGTGCGTCA+TGG | + | chr5_4:60489051-60489070 | Msa0861230:CDS | 45.0% |
CGATTTCCAATTTGGGGAAG+AGG | + | chr5_4:60486719-60486738 | Msa0861230:CDS | 45.0% | |
TTTCCAATTTGGGGAAGAGG+AGG | + | chr5_4:60486722-60486741 | Msa0861230:CDS | 45.0% | |
TTTGGTCCCAAAATCTGGGT+TGG | + | chr5_4:60486851-60486870 | Msa0861230:intron | 45.0% | |
! | CAACACACCAACCCAGATTT+TGG | - | chr5_4:60486861-60486880 | None:intergenic | 45.0% |
TTAACGGAAGGGACCAAAAC+AGG | + | chr5_4:60486935-60486954 | Msa0861230:intron | 45.0% | |
GAAGGGACCAAAACAGGTAA+CGG | + | chr5_4:60486941-60486960 | Msa0861230:intron | 45.0% | |
ATCTAGAGAGTCATAGGGTG+TGG | - | chr5_4:60487469-60487488 | None:intergenic | 45.0% | |
GGTCAAGTGAACAAAGCTTG+TGG | - | chr5_4:60487497-60487516 | None:intergenic | 45.0% | |
CTAGGGATTAGGGCAAAGAA+TGG | - | chr5_4:60487784-60487803 | None:intergenic | 45.0% | |
ATCCGAGATAGAGTGATAGG+AGG | + | chr5_4:60488025-60488044 | Msa0861230:intron | 45.0% | |
CTCCAACCATCTGTCAACAA+CGG | - | chr5_4:60488537-60488556 | None:intergenic | 45.0% | |
ATTGCTTTCCAGTACCTTGG+TGG | + | chr5_4:60488597-60488616 | Msa0861230:CDS | 45.0% | |
ATCTACTTCCACCAAGGTAC+TGG | - | chr5_4:60488608-60488627 | None:intergenic | 45.0% | |
TGATAGGGTGGATAATCAGC+TGG | - | chr5_4:60488663-60488682 | None:intergenic | 45.0% | |
ACCCTATCATTCCATGAGTG+CGG | + | chr5_4:60488674-60488693 | Msa0861230:CDS | 45.0% | |
TCGTCGATCCATATCCAGAT+AGG | - | chr5_4:60488729-60488748 | None:intergenic | 45.0% | |
! | ACGAGTTTTTGTGCTGCCAA+TGG | + | chr5_4:60489004-60489023 | Msa0861230:CDS | 45.0% |
TTGTGCTGCCAATGGTATTG+AGG | + | chr5_4:60489012-60489031 | Msa0861230:CDS | 45.0% | |
! | TGTGCTGCCAATGGTATTGA+GGG | + | chr5_4:60489013-60489032 | Msa0861230:CDS | 45.0% |
! | TTTCAAGTGCAAGTGCGTCA+TGG | + | chr5_4:60489051-60489070 | Msa0861230:CDS | 45.0% |
!!! | ATTTTTTTGAATTTATTTAA+CGG | + | chr5_4:60486919-60486938 | Msa0861230:intron | 5.0% |
!!! | ATTTTTTTGAATTTATTTAA+CGG | + | chr5_4:60486919-60486938 | Msa0861230:intron | 5.0% |
TGGGTAAGGGGTTTGCGATT+TGG | + | chr5_4:60486668-60486687 | Msa0861230:CDS | 50.0% | |
GGGTAAGGGGTTTGCGATTT+GGG | + | chr5_4:60486669-60486688 | Msa0861230:CDS | 50.0% | |
GGTAAGGGGTTTGCGATTTG+GGG | + | chr5_4:60486670-60486689 | Msa0861230:CDS | 50.0% | |
! | TTTGCGATTTGGGGAAGAGG+TGG | + | chr5_4:60486679-60486698 | Msa0861230:CDS | 50.0% |
ATTTGGGGAAGAGGTGGAGA+AGG | + | chr5_4:60486685-60486704 | Msa0861230:CDS | 50.0% | |
TCTCCTCCTCTTCCCCAAAT+TGG | - | chr5_4:60486728-60486747 | None:intergenic | 50.0% | |
ATTTGGGGAAGAGGAGGAGA+AGG | + | chr5_4:60486728-60486747 | Msa0861230:CDS | 50.0% | |
! | TCTAGCAAGTGCCATTGCTC+CGG | - | chr5_4:60488465-60488484 | None:intergenic | 50.0% |
! | GAGCAATGGCACTTGCTAGA+TGG | + | chr5_4:60488465-60488484 | Msa0861230:CDS | 50.0% |
! | TGGCACTTGCTAGATGGTGA+TGG | + | chr5_4:60488471-60488490 | Msa0861230:CDS | 50.0% |
! | GGCACTTGCTAGATGGTGAT+GGG | + | chr5_4:60488472-60488491 | Msa0861230:CDS | 50.0% |
AGTCAGCCGTTGTTGACAGA+TGG | + | chr5_4:60488528-60488547 | Msa0861230:CDS | 50.0% | |
AGCCGTTGTTGACAGATGGT+TGG | + | chr5_4:60488532-60488551 | Msa0861230:CDS | 50.0% | |
GCACTCATGGAATGATAGGG+TGG | - | chr5_4:60488675-60488694 | None:intergenic | 50.0% | |
GCCGCACTCATGGAATGATA+GGG | - | chr5_4:60488678-60488697 | None:intergenic | 50.0% | |
TGCCGCACTCATGGAATGAT+AGG | - | chr5_4:60488679-60488698 | None:intergenic | 50.0% | |
TGGATCGACGAAATCACCGA+AGG | + | chr5_4:60488738-60488757 | Msa0861230:intron | 50.0% | |
TCGCAAACCCCTTACCCAAA+TGG | - | chr5_4:60486666-60486685 | None:intergenic | 50.0% | |
TGGGTAAGGGGTTTGCGATT+TGG | + | chr5_4:60486668-60486687 | Msa0861230:CDS | 50.0% | |
GGGTAAGGGGTTTGCGATTT+GGG | + | chr5_4:60486669-60486688 | Msa0861230:CDS | 50.0% | |
GGTAAGGGGTTTGCGATTTG+GGG | + | chr5_4:60486670-60486689 | Msa0861230:CDS | 50.0% | |
! | TTTGCGATTTGGGGAAGAGG+TGG | + | chr5_4:60486679-60486698 | Msa0861230:CDS | 50.0% |
ATTTGGGGAAGAGGTGGAGA+AGG | + | chr5_4:60486685-60486704 | Msa0861230:CDS | 50.0% | |
TCTCCTCCTCTTCCCCAAAT+TGG | - | chr5_4:60486728-60486747 | None:intergenic | 50.0% | |
ATTTGGGGAAGAGGAGGAGA+AGG | + | chr5_4:60486728-60486747 | Msa0861230:CDS | 50.0% | |
! | TCTAGCAAGTGCCATTGCTC+CGG | - | chr5_4:60488465-60488484 | None:intergenic | 50.0% |
! | GAGCAATGGCACTTGCTAGA+TGG | + | chr5_4:60488465-60488484 | Msa0861230:CDS | 50.0% |
! | TGGCACTTGCTAGATGGTGA+TGG | + | chr5_4:60488471-60488490 | Msa0861230:CDS | 50.0% |
! | GGCACTTGCTAGATGGTGAT+GGG | + | chr5_4:60488472-60488491 | Msa0861230:CDS | 50.0% |
AGTCAGCCGTTGTTGACAGA+TGG | + | chr5_4:60488528-60488547 | Msa0861230:CDS | 50.0% | |
AGCCGTTGTTGACAGATGGT+TGG | + | chr5_4:60488532-60488551 | Msa0861230:CDS | 50.0% | |
GCACTCATGGAATGATAGGG+TGG | - | chr5_4:60488675-60488694 | None:intergenic | 50.0% | |
GCCGCACTCATGGAATGATA+GGG | - | chr5_4:60488678-60488697 | None:intergenic | 50.0% | |
TGCCGCACTCATGGAATGAT+AGG | - | chr5_4:60488679-60488698 | None:intergenic | 50.0% | |
TGGATCGACGAAATCACCGA+AGG | + | chr5_4:60488738-60488757 | Msa0861230:intron | 50.0% | |
! | GGGTTTGCGATTTGGGGAAG+AGG | + | chr5_4:60486676-60486695 | Msa0861230:CDS | 55.0% |
TGTACGAGCTACCGGAGCAA+TGG | + | chr5_4:60488451-60488470 | Msa0861230:CDS | 55.0% | |
! | GCTGCCAATGGTATTGAGGG+CGG | + | chr5_4:60489016-60489035 | Msa0861230:CDS | 55.0% |
GTCTCCGCCCTCAATACCAT+TGG | - | chr5_4:60489023-60489042 | None:intergenic | 55.0% | |
! | GGGTTTGCGATTTGGGGAAG+AGG | + | chr5_4:60486676-60486695 | Msa0861230:CDS | 55.0% |
TGTACGAGCTACCGGAGCAA+TGG | + | chr5_4:60488451-60488470 | Msa0861230:CDS | 55.0% | |
! | GCTGCCAATGGTATTGAGGG+CGG | + | chr5_4:60489016-60489035 | Msa0861230:CDS | 55.0% |
GTCTCCGCCCTCAATACCAT+TGG | - | chr5_4:60489023-60489042 | None:intergenic | 55.0% | |
ACACGATGCTGCCGCACTCA+TGG | - | chr5_4:60488688-60488707 | None:intergenic | 60.0% | |
ACACGATGCTGCCGCACTCA+TGG | - | chr5_4:60488688-60488707 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 60486665 | 60489096 | 60486665 | ID=Msa0861230;Name=Msa0861230 |
chr5_4 | mRNA | 60486665 | 60489096 | 60486665 | ID=Msa0861230-mRNA-1;Parent=Msa0861230;Name=Msa0861230-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0|0|0.75|0.66|0|4|0|200 |
chr5_4 | exon | 60486665 | 60486749 | 60486665 | ID=Msa0861230-mRNA-1:exon:18673;Parent=Msa0861230-mRNA-1 |
chr5_4 | exon | 60488421 | 60488562 | 60488421 | ID=Msa0861230-mRNA-1:exon:18674;Parent=Msa0861230-mRNA-1 |
chr5_4 | exon | 60488587 | 60488722 | 60488587 | ID=Msa0861230-mRNA-1:exon:18675;Parent=Msa0861230-mRNA-1 |
chr5_4 | exon | 60488860 | 60489096 | 60488860 | ID=Msa0861230-mRNA-1:exon:18676;Parent=Msa0861230-mRNA-1 |
chr5_4 | CDS | 60486665 | 60486749 | 60486665 | ID=Msa0861230-mRNA-1:cds;Parent=Msa0861230-mRNA-1 |
chr5_4 | CDS | 60488421 | 60488562 | 60488421 | ID=Msa0861230-mRNA-1:cds;Parent=Msa0861230-mRNA-1 |
chr5_4 | CDS | 60488587 | 60488722 | 60488587 | ID=Msa0861230-mRNA-1:cds;Parent=Msa0861230-mRNA-1 |
chr5_4 | CDS | 60488860 | 60489096 | 60488860 | ID=Msa0861230-mRNA-1:cds;Parent=Msa0861230-mRNA-1 |
Gene Sequence |
Protein sequence |