Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0862380 | XP_039690198.1 | 75.745 | 235 | 6 | 2 | 380 | 583 | 291 | 505 | 1.13e-110 | 353 |
| Msa0862380 | XP_039690198.1 | 79.323 | 266 | 7 | 2 | 148 | 380 | 254 | 504 | 1.77e-134 | 414 |
| Msa0862380 | XP_039690198.1 | 80.892 | 157 | 15 | 3 | 1 | 148 | 1 | 151 | 3.56e-62 | 226 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0862380 | sp|Q940Y3|ARID3_ARATH | 40.860 | 279 | 68 | 6 | 375 | 583 | 472 | 723 | 1.49e-51 | 192 |
| Msa0862380 | sp|Q940Y3|ARID3_ARATH | 41.509 | 265 | 61 | 6 | 188 | 380 | 480 | 722 | 1.87e-48 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0862380 | A0A072UDD4 | 65.683 | 271 | 6 | 3 | 380 | 583 | 366 | 616 | 3.97e-103 | 335 |
| Msa0862380 | A0A072UDD4 | 68.153 | 314 | 16 | 3 | 148 | 392 | 329 | 627 | 2.19e-129 | 403 |
| Msa0862380 | A0A072UDD4 | 81.379 | 145 | 12 | 3 | 13 | 148 | 88 | 226 | 4.70e-56 | 210 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0862380 | TR | ARID |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0862380 | MtrunA17_Chr5g0407561 | 69.868 | 302 | 7 | 3 | 148 | 380 | 254 | 540 | 7.71e-131 | 396 |
| Msa0862380 | MtrunA17_Chr5g0407561 | 65.683 | 271 | 6 | 3 | 380 | 583 | 291 | 541 | 3.37e-107 | 335 |
| Msa0862380 | MtrunA17_Chr5g0407561 | 80.892 | 157 | 15 | 3 | 1 | 148 | 1 | 151 | 6.32e-66 | 226 |
| Msa0862380 | MtrunA17_Chr3g0144341 | 39.163 | 263 | 64 | 5 | 394 | 583 | 69 | 308 | 4.25e-44 | 161 |
| Msa0862380 | MtrunA17_Chr3g0144341 | 35.465 | 344 | 100 | 10 | 116 | 380 | 7 | 307 | 7.63e-42 | 155 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0862380 | AT2G17410.2 | 41.516 | 277 | 63 | 6 | 375 | 583 | 472 | 717 | 8.22e-53 | 193 |
| Msa0862380 | AT2G17410.2 | 41.985 | 262 | 58 | 7 | 188 | 380 | 480 | 716 | 3.75e-50 | 186 |
| Msa0862380 | AT2G17410.1 | 40.860 | 279 | 68 | 6 | 375 | 583 | 472 | 723 | 1.51e-52 | 192 |
| Msa0862380 | AT2G17410.1 | 41.509 | 265 | 61 | 6 | 188 | 380 | 480 | 722 | 1.90e-49 | 184 |
| Msa0862380 | AT2G17410.3 | 40.860 | 279 | 68 | 6 | 375 | 583 | 472 | 723 | 1.51e-52 | 192 |
| Msa0862380 | AT2G17410.3 | 41.509 | 265 | 61 | 6 | 188 | 380 | 480 | 722 | 1.90e-49 | 184 |
| Msa0862380 | AT1G76510.2 | 34.100 | 261 | 77 | 4 | 394 | 583 | 137 | 373 | 2.99e-35 | 138 |
| Msa0862380 | AT1G76510.2 | 34.510 | 255 | 75 | 5 | 199 | 380 | 137 | 372 | 7.26e-33 | 131 |
| Msa0862380 | AT1G76510.4 | 34.100 | 261 | 77 | 4 | 394 | 583 | 137 | 373 | 2.99e-35 | 138 |
| Msa0862380 | AT1G76510.4 | 34.510 | 255 | 75 | 5 | 199 | 380 | 137 | 372 | 7.26e-33 | 131 |
| Msa0862380 | AT1G76510.1 | 34.100 | 261 | 77 | 4 | 394 | 583 | 137 | 373 | 2.99e-35 | 138 |
| Msa0862380 | AT1G76510.1 | 34.510 | 255 | 75 | 5 | 199 | 380 | 137 | 372 | 7.26e-33 | 131 |
| Msa0862380 | AT1G20910.1 | 32.824 | 262 | 79 | 4 | 394 | 583 | 101 | 337 | 8.96e-32 | 127 |
| Msa0862380 | AT1G20910.1 | 31.271 | 291 | 105 | 6 | 164 | 380 | 67 | 336 | 4.12e-29 | 120 |
| Msa0862380 | AT1G20910.2 | 32.824 | 262 | 79 | 4 | 394 | 583 | 101 | 337 | 1.00e-31 | 127 |
| Msa0862380 | AT1G20910.2 | 31.271 | 291 | 105 | 6 | 164 | 380 | 67 | 336 | 3.91e-29 | 120 |
| Msa0862380 | AT1G76510.3 | 31.338 | 284 | 77 | 5 | 394 | 583 | 137 | 396 | 3.41e-30 | 124 |
| Msa0862380 | AT1G76510.3 | 31.655 | 278 | 75 | 6 | 199 | 380 | 137 | 395 | 5.62e-28 | 118 |
Find 143 sgRNAs with CRISPR-Local
Find 563 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCCATTCTCCATAAAATT+TGG | 0.109421 | 5_4:-61977268 | None:intergenic |
| AAGCCATTCTCCATAAAATT+TGG | 0.109421 | 5_4:-61981540 | None:intergenic |
| AATCTTGCTGGTTTGGAATT+AGG | 0.186518 | 5_4:+61976718 | Msa0862380:CDS |
| CCACAGTTTCCTGGACTTTC+CGG | 0.219944 | 5_4:+61983113 | Msa0862380:CDS |
| AGGAGCTTGAAAACTTCTTT+AGG | 0.247131 | 5_4:+61977220 | Msa0862380:CDS |
| AGGAGCTTGAAAACTTCTTT+AGG | 0.247131 | 5_4:+61981492 | Msa0862380:CDS |
| GTGTCAGATGATGTTAAAAT+TGG | 0.259184 | 5_4:+61976829 | Msa0862380:CDS |
| AACATGTTCTGCTGCGAATC+CGG | 0.285848 | 5_4:-61977126 | None:intergenic |
| CTTCTTTAGGGAGAGGAGTA+TGG | 0.293766 | 5_4:+61977233 | Msa0862380:CDS |
| CTTCTTTAGGGAGAGGAGTA+TGG | 0.293766 | 5_4:+61981505 | Msa0862380:CDS |
| GAAATATATGCTTTAGTTCC+TGG | 0.296044 | 5_4:+61980913 | Msa0862380:CDS |
| GGACTTGCACCACAGTTTCC+TGG | 0.301953 | 5_4:+61983104 | Msa0862380:intron |
| ACGTAAGAGCCCATCTTATA+TGG | 0.307472 | 5_4:+61980462 | Msa0862380:CDS |
| ACGTAAGAGCCCATCTTATA+TGG | 0.307472 | 5_4:+61984496 | Msa0862380:CDS |
| TACGAAAGGCATAACATAAA+AGG | 0.323371 | 5_4:+61979380 | Msa0862380:CDS |
| TATGAAAGGCATAACATAAA+AGG | 0.325509 | 5_4:+61983450 | Msa0862380:CDS |
| TATTGATAATCTTGCTGGTT+TGG | 0.333193 | 5_4:+61976711 | Msa0862380:CDS |
| GCCTGTGAATGTTGAAAATC+AGG | 0.345539 | 5_4:+61979439 | Msa0862380:CDS |
| GCCTGTGAATGTTGAAAATC+AGG | 0.345539 | 5_4:+61983509 | Msa0862380:CDS |
| GGAGCTTGAAAACTTCTTTA+GGG | 0.352045 | 5_4:+61977221 | Msa0862380:CDS |
| GGAGCTTGAAAACTTCTTTA+GGG | 0.352045 | 5_4:+61981493 | Msa0862380:CDS |
| AGCCATTCTCCATAAAATTT+GGG | 0.353493 | 5_4:-61977267 | None:intergenic |
| AGCCATTCTCCATAAAATTT+GGG | 0.353493 | 5_4:-61981539 | None:intergenic |
| ATTCCTGTCCTTGTATCATC+AGG | 0.357516 | 5_4:-61977033 | None:intergenic |
| TAAGATGGGCTCTTACGTTT+AGG | 0.359154 | 5_4:-61980457 | None:intergenic |
| TAAGATGGGCTCTTACGTTT+AGG | 0.359154 | 5_4:-61984491 | None:intergenic |
| CATAGGACCTTCTGCTGATT+GGG | 0.368858 | 5_4:+61980770 | Msa0862380:CDS |
| CATAGGACCTTCTGCTGATT+GGG | 0.368858 | 5_4:+61984819 | Msa0862380:CDS |
| CATAGGACCTTCTGCTGATT+GGG | 0.373243 | 5_4:+61980725 | Msa0862380:CDS |
| CATAGGACCTTCTGCTGATT+GGG | 0.373243 | 5_4:+61984759 | Msa0862380:CDS |
| CAAAGTGGGTCAGGGTGTTC+CGG | 0.378330 | 5_4:+61976609 | Msa0862380:CDS |
| ACATAGGACCTTCTGCTGAT+TGG | 0.380929 | 5_4:+61980724 | Msa0862380:CDS |
| ACATAGGACCTTCTGCTGAT+TGG | 0.380929 | 5_4:+61980769 | Msa0862380:CDS |
| ACATAGGACCTTCTGCTGAT+TGG | 0.380929 | 5_4:+61984758 | Msa0862380:CDS |
| ACATAGGACCTTCTGCTGAT+TGG | 0.380929 | 5_4:+61984818 | Msa0862380:CDS |
| GAAGTTTCCTCTACAGTAAC+CGG | 0.388879 | 5_4:-61976790 | None:intergenic |
| ATGATTATTGATAATCTTGC+TGG | 0.390384 | 5_4:+61976706 | Msa0862380:CDS |
| TGTCTTAACTGTGGTCTTGA+AGG | 0.397597 | 5_4:-61980514 | None:intergenic |
| TGTCTTAACTGTGGTCTTGA+AGG | 0.397597 | 5_4:-61984548 | None:intergenic |
| ACCTCCTCCCGCAGAAGGCC+AGG | 0.413895 | 5_4:-61984981 | None:intergenic |
| GAAATATATGCTTTAGCTCC+TGG | 0.421024 | 5_4:+61984963 | Msa0862380:CDS |
| ACTGCATTATCCATATAAGA+TGG | 0.421547 | 5_4:-61980472 | None:intergenic |
| ACTGCATTATCCATATAAGA+TGG | 0.421547 | 5_4:-61984506 | None:intergenic |
| AGAAAACGACAAAGTGGGTC+AGG | 0.425358 | 5_4:+61976600 | Msa0862380:CDS |
| ACCTCCTCCCGCAGAAGGCC+AGG | 0.425504 | 5_4:-61980931 | None:intergenic |
| GGCCTTCTGCGGGAGGAGGT+TGG | 0.443652 | 5_4:+61984984 | Msa0862380:CDS |
| TGTTCAAGATACCCTTCATT+CGG | 0.446726 | 5_4:+61976924 | Msa0862380:CDS |
| ATACCTTCTGAAACAACCTT+GGG | 0.449374 | 5_4:-61976889 | None:intergenic |
| GATGCTGATCATTATTATGA+TGG | 0.450037 | 5_4:+61977156 | Msa0862380:CDS |
| GATGCTGATCATTATTATGA+TGG | 0.450037 | 5_4:+61981428 | Msa0862380:CDS |
| ATGGAGAGCTGTGATGAGAT+TGG | 0.450926 | 5_4:+61977416 | Msa0862380:CDS |
| TCCTGGCCTTCTGCGGGAGG+AGG | 0.451156 | 5_4:+61984980 | Msa0862380:CDS |
| ACATGTTCTGCTGCGAATCC+GGG | 0.460181 | 5_4:-61977125 | None:intergenic |
| TTTAGTTCCTGGCCTTCTGC+GGG | 0.466389 | 5_4:+61980924 | Msa0862380:CDS |
| TTTAGCTCCTGGCCTTCTGC+GGG | 0.475350 | 5_4:+61984974 | Msa0862380:CDS |
| TCCTGGCCTTCTGCGGGAGG+AGG | 0.479319 | 5_4:+61980930 | Msa0862380:CDS |
| TTCTGCTGATTGGGTATATG+TGG | 0.487210 | 5_4:+61980734 | Msa0862380:CDS |
| TTCTGCTGATTGGGTATATG+TGG | 0.487210 | 5_4:+61984768 | Msa0862380:CDS |
| GATGCATCTTGAAGTTCAAC+CGG | 0.489348 | 5_4:+61976771 | Msa0862380:CDS |
| TACAAAAGAAAACGACAAAG+TGG | 0.494694 | 5_4:+61976594 | Msa0862380:CDS |
| TCACCTTCTCATAAAATCTC+CGG | 0.500478 | 5_4:-61983132 | None:intergenic |
| AATACCTTCTGAAACAACCT+TGG | 0.501857 | 5_4:-61976890 | None:intergenic |
| TTGAAAACTTCTTTAGGGAG+AGG | 0.501970 | 5_4:+61977226 | Msa0862380:CDS |
| TTGAAAACTTCTTTAGGGAG+AGG | 0.501970 | 5_4:+61981498 | Msa0862380:CDS |
| TGGAGAGCTGTGATGAGATT+GGG | 0.502339 | 5_4:+61977417 | Msa0862380:CDS |
| TATTATGATGGAAATGAGTC+GGG | 0.503594 | 5_4:+61977168 | Msa0862380:CDS |
| TATTATGATGGAAATGAGTC+GGG | 0.503594 | 5_4:+61981440 | Msa0862380:CDS |
| GAAAATGAAAATTCAAAACT+AGG | 0.506491 | 5_4:+61976670 | Msa0862380:CDS |
| TATGCCTTTCATAATCAAGA+AGG | 0.508041 | 5_4:-61983440 | None:intergenic |
| TCCTCTACATTAACATTCGC+CGG | 0.508778 | 5_4:-61976628 | None:intergenic |
| CTTTAGCTCCTGGCCTTCTG+CGG | 0.509413 | 5_4:+61984973 | Msa0862380:CDS |
| CTTTAGTTCCTGGCCTTCTG+CGG | 0.509492 | 5_4:+61980923 | Msa0862380:CDS |
| TGTCAGATGATGTTAAAATT+GGG | 0.511487 | 5_4:+61976830 | Msa0862380:CDS |
| CAGCCGCCTCAACCGAATGA+AGG | 0.516023 | 5_4:-61976936 | None:intergenic |
| TCATATGTTGGACACAGCTA+AGG | 0.516542 | 5_4:+61976963 | Msa0862380:CDS |
| TTATTATGATGGAAATGAGT+CGG | 0.516599 | 5_4:+61977167 | Msa0862380:CDS |
| TTATTATGATGGAAATGAGT+CGG | 0.516599 | 5_4:+61981439 | Msa0862380:CDS |
| GGTATATGTGGATGCTAGGT+CGG | 0.520871 | 5_4:+61984780 | Msa0862380:CDS |
| AGATACCCTTCATTCGGTTG+AGG | 0.521109 | 5_4:+61976930 | Msa0862380:CDS |
| AGCTCCTGGCCTTCTGCGGG+AGG | 0.524838 | 5_4:+61984977 | Msa0862380:CDS |
| AGGCCCTTCTTGATTATGAA+AGG | 0.535189 | 5_4:+61983436 | Msa0862380:intron |
| TATGCCTTTCGTAATCAAGA+AGG | 0.542010 | 5_4:-61979370 | None:intergenic |
| GTCCTTGTATCATCAGGGGC+AGG | 0.543099 | 5_4:-61977027 | None:intergenic |
| CTCCAACCTCCTCCCGCAGA+AGG | 0.545798 | 5_4:-61984986 | None:intergenic |
| AGTTCCTGGCCTTCTGCGGG+AGG | 0.546177 | 5_4:+61980927 | Msa0862380:CDS |
| TTAGAAGTTGAAAGTAAGGA+CGG | 0.547589 | 5_4:+61977066 | Msa0862380:CDS |
| AAACCCAAGGTTGTTTCAGA+AGG | 0.551480 | 5_4:+61976886 | Msa0862380:CDS |
| ATAAAATCTCCGGAAAGTCC+AGG | 0.551594 | 5_4:-61983122 | None:intergenic |
| CTGCATTATCCATATAAGAT+GGG | 0.554084 | 5_4:-61980471 | None:intergenic |
| CTGCATTATCCATATAAGAT+GGG | 0.554084 | 5_4:-61984505 | None:intergenic |
| AGTTCAACCGGTTACTGTAG+AGG | 0.554846 | 5_4:+61976783 | Msa0862380:CDS |
| GAGGAAGCTGACCATGTCAT+TGG | 0.555265 | 5_4:+61976646 | Msa0862380:CDS |
| GCAGTACCTCCTCCCGCAGA+AGG | 0.555601 | 5_4:-61980936 | None:intergenic |
| TTGGGTATATGTGGATGCTA+TGG | 0.555897 | 5_4:+61980743 | Msa0862380:CDS |
| TTCCTGCCCCTGATGATACA+AGG | 0.557681 | 5_4:+61977025 | Msa0862380:CDS |
| GTATATGTGGATGCTAGGTC+GGG | 0.558396 | 5_4:+61984781 | Msa0862380:CDS |
| GAGATTGGGAGGCTATGAGA+AGG | 0.562330 | 5_4:+61977431 | Msa0862380:CDS |
| TTCCTGTCCTTGTATCATCA+GGG | 0.567796 | 5_4:-61977032 | None:intergenic |
| AGGCCCTTCTTGATTACGAA+AGG | 0.570162 | 5_4:+61979366 | Msa0862380:intron |
| TCAACATTCACAGGCTCTGG+AGG | 0.570563 | 5_4:-61979431 | None:intergenic |
| TCAACATTCACAGGCTCTGG+AGG | 0.570563 | 5_4:-61983501 | None:intergenic |
| GCTCCTTCATAAAAGCTGCT+TGG | 0.572842 | 5_4:-61977203 | None:intergenic |
| GCTCCTTCATAAAAGCTGCT+TGG | 0.572842 | 5_4:-61981475 | None:intergenic |
| GGCGGCTGATGCTCATATGT+TGG | 0.573754 | 5_4:+61976951 | Msa0862380:CDS |
| GGAACAGCTGTGGTTGACAT+AGG | 0.574547 | 5_4:+61980708 | Msa0862380:CDS |
| GGAACAGCTGTGGTTGACAT+AGG | 0.574547 | 5_4:+61984742 | Msa0862380:CDS |
| GGAACAGCTGTGGTTGACAT+AGG | 0.574547 | 5_4:+61984802 | Msa0862380:CDS |
| TACCCTTCATTCGGTTGAGG+CGG | 0.575922 | 5_4:+61976933 | Msa0862380:CDS |
| GCCCCTGATGATACAAGGAC+AGG | 0.576326 | 5_4:+61977030 | Msa0862380:CDS |
| ATTGGGTATATGTGGATGCT+AGG | 0.578809 | 5_4:+61984776 | Msa0862380:CDS |
| TGTTAAAATTGGGAAGGAAG+AGG | 0.583384 | 5_4:+61976840 | Msa0862380:CDS |
| AGCCGCCTCAACCGAATGAA+GGG | 0.583777 | 5_4:-61976935 | None:intergenic |
| CATTCTCCATAAAATTTGGG+AGG | 0.584904 | 5_4:-61977264 | None:intergenic |
| CATTCTCCATAAAATTTGGG+AGG | 0.584904 | 5_4:-61981536 | None:intergenic |
| ATGCCTTTCATAATCAAGAA+GGG | 0.589284 | 5_4:-61983439 | None:intergenic |
| ATGCCTTTCGTAATCAAGAA+GGG | 0.591525 | 5_4:-61979369 | None:intergenic |
| CATATGTTGGACACAGCTAA+GGG | 0.591530 | 5_4:+61976964 | Msa0862380:CDS |
| GCCTGTAGATAATGAAAACC+CGG | 0.601904 | 5_4:+61977107 | Msa0862380:CDS |
| AGATGATGTTAAAATTGGGA+AGG | 0.607157 | 5_4:+61976834 | Msa0862380:CDS |
| GAAAACGACAAAGTGGGTCA+GGG | 0.611750 | 5_4:+61976601 | Msa0862380:CDS |
| AAATGAGTCGGGAACAGAAG+AGG | 0.612300 | 5_4:+61977179 | Msa0862380:CDS |
| AAATGAGTCGGGAACAGAAG+AGG | 0.612300 | 5_4:+61981451 | Msa0862380:CDS |
| TGCTAGGTCGGGAACAGCTG+TGG | 0.627055 | 5_4:+61980698 | Msa0862380:intron |
| TGCTAGGTCGGGAACAGCTG+TGG | 0.627055 | 5_4:+61984732 | Msa0862380:intron |
| TGCTAGGTCGGGAACAGCTG+TGG | 0.627055 | 5_4:+61984792 | Msa0862380:CDS |
| TCCTGTCCTTGTATCATCAG+GGG | 0.629902 | 5_4:-61977031 | None:intergenic |
| ACATATACCCAATCAGCAGA+AGG | 0.633534 | 5_4:-61980732 | None:intergenic |
| ACATATACCCAATCAGCAGA+AGG | 0.633534 | 5_4:-61984766 | None:intergenic |
| ACAAAAGAAAACGACAAAGT+GGG | 0.644226 | 5_4:+61976595 | Msa0862380:CDS |
| GTGGATGCTATGGTTGACAT+AGG | 0.648553 | 5_4:+61980753 | Msa0862380:CDS |
| TGAAGATGCTTCTGATGTGA+AGG | 0.653690 | 5_4:+61976987 | Msa0862380:CDS |
| GGCTCTGGAGGAGATGCGAT+AGG | 0.659024 | 5_4:-61979419 | None:intergenic |
| GGCTCTGGAGGAGATGCGAT+AGG | 0.659024 | 5_4:-61983489 | None:intergenic |
| TCCGGCGAATGTTAATGTAG+AGG | 0.660878 | 5_4:+61976627 | Msa0862380:CDS |
| GAAAGGCATAACATAAAAGG+CGG | 0.672469 | 5_4:+61983453 | Msa0862380:CDS |
| AGATGCTTCTGATGTGAAGG+TGG | 0.677639 | 5_4:+61976990 | Msa0862380:CDS |
| CCGGAAAGTCCAGGAAACTG+TGG | 0.685217 | 5_4:-61983113 | None:intergenic |
| GGATGAAAATGTGAAACCCA+AGG | 0.695062 | 5_4:+61976873 | Msa0862380:CDS |
| GAAAGGCATAACATAAAAGG+CGG | 0.700632 | 5_4:+61979383 | Msa0862380:CDS |
| GAAGGAAGAGGTGCATGCTG+AGG | 0.700761 | 5_4:+61976852 | Msa0862380:CDS |
| ATAATGCAGTCAAAGCAGCA+CGG | 0.717518 | 5_4:+61980485 | Msa0862380:CDS |
| ATAATGCAGTCAAAGCAGCA+CGG | 0.717518 | 5_4:+61984519 | Msa0862380:CDS |
| AGAGCTGTGATGAGATTGGG+AGG | 0.730490 | 5_4:+61977420 | Msa0862380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTGTTAGATTAATAAA+TGG | + | chr5_4:61977989-61978008 | Msa0862380:intron | 10.0% |
| !!! | TATTTTATATATATTCTTGT+TGG | + | chr5_4:61979154-61979173 | Msa0862380:intron | 10.0% |
| !!! | ATAAATTTTAATTATGTTGT+AGG | + | chr5_4:61980374-61980393 | Msa0862380:intron | 10.0% |
| !!! | TTTTTTTTTTAAATTATGAG+TGG | + | chr5_4:61982976-61982995 | Msa0862380:intron | 10.0% |
| !! | TTTATTGAAATTAAATCATA+AGG | + | chr5_4:61983845-61983864 | Msa0862380:intron | 10.0% |
| !!! | ATAAATTTTAATTATGTTGT+AGG | + | chr5_4:61980374-61980393 | Msa0862380:intron | 10.0% |
| !! | TTAAAAAATACAAGACAATT+AGG | - | chr5_4:61978205-61978224 | None:intergenic | 15.0% |
| !!! | ATTGTCTTGTATTTTTTAAT+AGG | + | chr5_4:61978206-61978225 | Msa0862380:intron | 15.0% |
| !! | AAATGAAAATTGGAAATATA+AGG | - | chr5_4:61978346-61978365 | None:intergenic | 15.0% |
| !!! | ATGCATTTTTTTTAATGATA+TGG | + | chr5_4:61978903-61978922 | Msa0862380:intron | 15.0% |
| !!! | TGCATTTTTTTTAATGATAT+GGG | + | chr5_4:61978904-61978923 | Msa0862380:intron | 15.0% |
| !! | TTTCTTGAAATTAAATCATA+AGG | + | chr5_4:61979811-61979830 | Msa0862380:intron | 15.0% |
| !! | TAATTAAAATTTATAGCACA+AGG | - | chr5_4:61980368-61980387 | None:intergenic | 15.0% |
| !! | ATTTACTATGAATATTTACA+TGG | - | chr5_4:61981225-61981244 | None:intergenic | 15.0% |
| !! | AAAGATTTATTATATAGACT+GGG | - | chr5_4:61981260-61981279 | None:intergenic | 15.0% |
| !! | TAAAGATTTATTATATAGAC+TGG | - | chr5_4:61981261-61981280 | None:intergenic | 15.0% |
| !! | CAAATATAATTCAAAATATG+TGG | + | chr5_4:61977833-61977852 | Msa0862380:intron | 15.0% |
| !! | AAATGAAAATTGGAAATATA+AGG | - | chr5_4:61978346-61978365 | None:intergenic | 15.0% |
| !! | AATGTCAAAATTCAAATAAA+AGG | - | chr5_4:61979119-61979138 | None:intergenic | 15.0% |
| !! | TAGTTTATATATATTCTTGT+TGG | + | chr5_4:61983224-61983243 | Msa0862380:intron | 15.0% |
| !! | TAATTAAAATTTATAGCACA+AGG | - | chr5_4:61980368-61980387 | None:intergenic | 15.0% |
| !! | GAAAATGAAAATTCAAAACT+AGG | + | chr5_4:61976670-61976689 | Msa0862380:CDS | 20.0% |
| !!! | AATTTTGTCATATTCAAAGA+TGG | - | chr5_4:61977336-61977355 | None:intergenic | 20.0% |
| !! | AATCATTCAACATAATAGAA+AGG | - | chr5_4:61977473-61977492 | None:intergenic | 20.0% |
| !! | AAAACGATTAAATATTGTAG+AGG | + | chr5_4:61977521-61977540 | Msa0862380:intron | 20.0% |
| !!! | TCCATAGTGATTTTAAATAT+TGG | + | chr5_4:61977544-61977563 | Msa0862380:intron | 20.0% |
| !!! | ACCAATATTTAAAATCACTA+TGG | - | chr5_4:61977548-61977567 | None:intergenic | 20.0% |
| !!! | TGATTTTAAATATTGGTTGA+TGG | + | chr5_4:61977551-61977570 | Msa0862380:intron | 20.0% |
| !!! | GAGTTGTTTGAAATTTAATT+TGG | + | chr5_4:61977597-61977616 | Msa0862380:intron | 20.0% |
| !!! | ATAGTTTTCTTTTAATTCTC+AGG | + | chr5_4:61978062-61978081 | Msa0862380:intron | 20.0% |
| !!! | AAGTTGTTTTCATTGTTTAT+AGG | + | chr5_4:61978172-61978191 | Msa0862380:intron | 20.0% |
| !! | ACAAAAACACAAATGAAAAT+TGG | - | chr5_4:61978356-61978375 | None:intergenic | 20.0% |
| !! | GTTTCAAATTACAAGAATAA+CGG | - | chr5_4:61978500-61978519 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTAATGATATGGG+TGG | + | chr5_4:61978907-61978926 | Msa0862380:intron | 20.0% |
| !! | GAACAATAATGATCTATATA+AGG | + | chr5_4:61979493-61979512 | Msa0862380:intron | 20.0% |
| !!! | AATTTTGTTGGTATATTTAC+AGG | + | chr5_4:61979707-61979726 | Msa0862380:intron | 20.0% |
| !! | AACATAGATAATTGTAACAT+GGG | - | chr5_4:61979875-61979894 | None:intergenic | 20.0% |
| !! | TGAAATTGTTTATTGCAATT+AGG | + | chr5_4:61980186-61980205 | Msa0862380:intron | 20.0% |
| !! | AAGAAAACAGAAAATGAAAA+AGG | - | chr5_4:61980240-61980259 | None:intergenic | 20.0% |
| !! | ACAGTAAAAAGAATATAGAA+AGG | - | chr5_4:61980548-61980567 | None:intergenic | 20.0% |
| !! | AAGATTTATTATATAGACTG+GGG | - | chr5_4:61981259-61981278 | None:intergenic | 20.0% |
| !!! | AATTTTGTCATATTCAAAGA+TGG | - | chr5_4:61977336-61977355 | None:intergenic | 20.0% |
| !! | AATCATTCAACATAATAGAA+AGG | - | chr5_4:61977473-61977492 | None:intergenic | 20.0% |
| !! | AAAACGATTAAATATTGTAG+AGG | + | chr5_4:61977521-61977540 | Msa0862380:intron | 20.0% |
| !!! | TCCATAGTGATTTTAAATAT+TGG | + | chr5_4:61977544-61977563 | Msa0862380:intron | 20.0% |
| !!! | ACCAATATTTAAAATCACTA+TGG | - | chr5_4:61977548-61977567 | None:intergenic | 20.0% |
| !!! | TGATTTTAAATATTGGTTGA+TGG | + | chr5_4:61977551-61977570 | Msa0862380:intron | 20.0% |
| !!! | GAGTTGTTTGAAATTTAATT+TGG | + | chr5_4:61977597-61977616 | Msa0862380:intron | 20.0% |
| !!! | AAGTTGTTTTCATTGTTTAT+AGG | + | chr5_4:61978172-61978191 | Msa0862380:intron | 20.0% |
| !! | TTCAAAAATACAAGACAATT+AGG | - | chr5_4:61982310-61982329 | None:intergenic | 20.0% |
| !!! | ATTGTCTTGTATTTTTGAAT+AGG | + | chr5_4:61982311-61982330 | Msa0862380:intron | 20.0% |
| !! | ACAAAAACACAAATGAAAAT+TGG | - | chr5_4:61978356-61978375 | None:intergenic | 20.0% |
| !! | GTTTCAAATTACAAGAATAA+CGG | - | chr5_4:61978500-61978519 | None:intergenic | 20.0% |
| !! | GAACAATAATGATCTATATA+AGG | + | chr5_4:61979493-61979512 | Msa0862380:intron | 20.0% |
| !!! | AATTTTGTTGGTATATTTAC+AGG | + | chr5_4:61979707-61979726 | Msa0862380:intron | 20.0% |
| !!! | AATTTCAATAAAGCATTAAC+CGG | - | chr5_4:61983837-61983856 | None:intergenic | 20.0% |
| !! | AACATACATAATTGTAACAT+GGG | - | chr5_4:61983909-61983928 | None:intergenic | 20.0% |
| !! | TGAAATTGTTTATTGCAATT+AGG | + | chr5_4:61980186-61980205 | Msa0862380:intron | 20.0% |
| !! | AAGAAAACAGAAAATGAAAA+AGG | - | chr5_4:61980240-61980259 | None:intergenic | 20.0% |
| !! | ACAGTAAAAAGAATATAGAA+AGG | - | chr5_4:61980548-61980567 | None:intergenic | 20.0% |
| !! | ATGATTATTGATAATCTTGC+TGG | + | chr5_4:61976706-61976725 | Msa0862380:CDS | 25.0% |
| ! | TGTCAGATGATGTTAAAATT+GGG | + | chr5_4:61976830-61976849 | Msa0862380:CDS | 25.0% |
| !!! | TGTTTTAGAAGTTGAAAGTA+AGG | + | chr5_4:61977062-61977081 | Msa0862380:CDS | 25.0% |
| !! | TTATTATGATGGAAATGAGT+CGG | + | chr5_4:61977167-61977186 | Msa0862380:CDS | 25.0% |
| ! | TTCATTCAAATTTATGTAGC+TGG | + | chr5_4:61977491-61977510 | Msa0862380:intron | 25.0% |
| ! | AGAGAATTTAAACTTGTAGA+AGG | + | chr5_4:61977734-61977753 | Msa0862380:intron | 25.0% |
| ! | ATGGCAATAACAAGATATAA+TGG | + | chr5_4:61977897-61977916 | Msa0862380:intron | 25.0% |
| ! | TGGCAATAACAAGATATAAT+GGG | + | chr5_4:61977898-61977917 | Msa0862380:intron | 25.0% |
| !!! | TAATGGGTTTTGTTAATTAC+TGG | + | chr5_4:61977914-61977933 | Msa0862380:intron | 25.0% |
| ! | ATCTAACAAAAAAGATTCCA+GGG | - | chr5_4:61977982-61978001 | None:intergenic | 25.0% |
| ! | AATCTAACAAAAAAGATTCC+AGG | - | chr5_4:61977983-61978002 | None:intergenic | 25.0% |
| ! | TTTGTAAATTTGGCTACTTA+AGG | + | chr5_4:61978038-61978057 | Msa0862380:intron | 25.0% |
| ! | ATCTTCTTAGAATGTTTGTT+TGG | + | chr5_4:61978426-61978445 | Msa0862380:intron | 25.0% |
| ! | TCTTCTTAGAATGTTTGTTT+GGG | + | chr5_4:61978427-61978446 | Msa0862380:intron | 25.0% |
| !! | ATATGGTCTTAACAATAAGT+GGG | - | chr5_4:61978695-61978714 | None:intergenic | 25.0% |
| !! | ATGGTCACATTTTATGTAAA+TGG | + | chr5_4:61978798-61978817 | Msa0862380:intron | 25.0% |
| ! | TAAATGGAAAAAGCTATGAT+GGG | + | chr5_4:61978814-61978833 | Msa0862380:intron | 25.0% |
| ! | CAATGAAACAAGTGTTAAAA+AGG | - | chr5_4:61979324-61979343 | None:intergenic | 25.0% |
| ! | ACATTCAGTTAATAAGATTG+TGG | - | chr5_4:61979532-61979551 | None:intergenic | 25.0% |
| !!! | TGTGTTTGATTAGCTTATTT+TGG | + | chr5_4:61979549-61979568 | Msa0862380:intron | 25.0% |
| ! | TGTGTTGGATTATCTATATA+AGG | + | chr5_4:61979597-61979616 | Msa0862380:intron | 25.0% |
| !!! | AATTTCAAGAAAGCATTAAC+CGG | - | chr5_4:61979803-61979822 | None:intergenic | 25.0% |
| ! | GAACATAGATAATTGTAACA+TGG | - | chr5_4:61979876-61979895 | None:intergenic | 25.0% |
| ! | AACAATTTCAGATATTGTTC+AGG | - | chr5_4:61980176-61980195 | None:intergenic | 25.0% |
| ! | TTGTTTATTGCAATTAGGTT+TGG | + | chr5_4:61980191-61980210 | Msa0862380:intron | 25.0% |
| ! | AAATTTATAGCACAAGGAAT+GGG | - | chr5_4:61980362-61980381 | None:intergenic | 25.0% |
| ! | AAAATTTATAGCACAAGGAA+TGG | - | chr5_4:61980363-61980382 | None:intergenic | 25.0% |
| ! | TAACATAATAGTCTACAAAC+AGG | - | chr5_4:61981145-61981164 | None:intergenic | 25.0% |
| ! | TTATATTGCTGAAGAATGAA+GGG | - | chr5_4:61981173-61981192 | None:intergenic | 25.0% |
| ! | TTTATATTGCTGAAGAATGA+AGG | - | chr5_4:61981174-61981193 | None:intergenic | 25.0% |
| !! | TTATTATGATGGAAATGAGT+CGG | + | chr5_4:61977167-61977186 | Msa0862380:CDS | 25.0% |
| ! | TTCATTCAAATTTATGTAGC+TGG | + | chr5_4:61977491-61977510 | Msa0862380:intron | 25.0% |
| ! | AGAGAATTTAAACTTGTAGA+AGG | + | chr5_4:61977734-61977753 | Msa0862380:intron | 25.0% |
| ! | TTAAACTTGTAGAAGGAATT+TGG | + | chr5_4:61977741-61977760 | Msa0862380:intron | 25.0% |
| ! | TCCAATTATCATAAATTCTC+AGG | + | chr5_4:61982149-61982168 | Msa0862380:intron | 25.0% |
| ! | ACCTGAGAATTTATGATAAT+TGG | - | chr5_4:61982153-61982172 | None:intergenic | 25.0% |
| ! | ATCTTCTTAGAATGTTTGTT+TGG | + | chr5_4:61978426-61978445 | Msa0862380:intron | 25.0% |
| ! | TCTTCTTAGAATGTTTGTTT+GGG | + | chr5_4:61978427-61978446 | Msa0862380:intron | 25.0% |
| ! | TAAATGGAAAAAGCTACAAT+GGG | + | chr5_4:61982837-61982856 | Msa0862380:intron | 25.0% |
| ! | GTATATTACTGAGAATAATC+AGG | - | chr5_4:61983054-61983073 | None:intergenic | 25.0% |
| ! | ATGAAAACAAAGGACAATAT+TGG | - | chr5_4:61983076-61983095 | None:intergenic | 25.0% |
| ! | CAATGAAACAAGTGTTAAAA+AGG | - | chr5_4:61979324-61979343 | None:intergenic | 25.0% |
| !! | TATGAAAGGCATAACATAAA+AGG | + | chr5_4:61983450-61983469 | Msa0862380:CDS | 25.0% |
| !! | ATTTCAATAAAGCATTAACC+GGG | - | chr5_4:61983836-61983855 | None:intergenic | 25.0% |
| ! | GAACATACATAATTGTAACA+TGG | - | chr5_4:61983910-61983929 | None:intergenic | 25.0% |
| ! | AACAATTTCAGATATTGTTC+AGG | - | chr5_4:61980176-61980195 | None:intergenic | 25.0% |
| ! | TTGTTTATTGCAATTAGGTT+TGG | + | chr5_4:61980191-61980210 | Msa0862380:intron | 25.0% |
| ! | AAATTTATAGCACAAGGAAT+GGG | - | chr5_4:61980362-61980381 | None:intergenic | 25.0% |
| ! | AAAATTTATAGCACAAGGAA+TGG | - | chr5_4:61980363-61980382 | None:intergenic | 25.0% |
| TACAAAAGAAAACGACAAAG+TGG | + | chr5_4:61976594-61976613 | Msa0862380:CDS | 30.0% | |
| ACAAAAGAAAACGACAAAGT+GGG | + | chr5_4:61976595-61976614 | Msa0862380:CDS | 30.0% | |
| ! | TTTCATTTTCACCAATGACA+TGG | - | chr5_4:61976660-61976679 | None:intergenic | 30.0% |
| ! | TATTGATAATCTTGCTGGTT+TGG | + | chr5_4:61976711-61976730 | Msa0862380:CDS | 30.0% |
| GTGTCAGATGATGTTAAAAT+TGG | + | chr5_4:61976829-61976848 | Msa0862380:CDS | 30.0% | |
| AGATGATGTTAAAATTGGGA+AGG | + | chr5_4:61976834-61976853 | Msa0862380:CDS | 30.0% | |
| TTAGAAGTTGAAAGTAAGGA+CGG | + | chr5_4:61977066-61977085 | Msa0862380:CDS | 30.0% | |
| GATGCTGATCATTATTATGA+TGG | + | chr5_4:61977156-61977175 | Msa0862380:CDS | 30.0% | |
| ! | TATTATGATGGAAATGAGTC+GGG | + | chr5_4:61977168-61977187 | Msa0862380:CDS | 30.0% |
| ! | TTCAAACCTCCCAAATTTTA+TGG | + | chr5_4:61977258-61977277 | Msa0862380:CDS | 30.0% |
| AGCCATTCTCCATAAAATTT+GGG | - | chr5_4:61977270-61977289 | None:intergenic | 30.0% | |
| AAGCCATTCTCCATAAAATT+TGG | - | chr5_4:61977271-61977290 | None:intergenic | 30.0% | |
| CAATAGAGATAACTCACTTA+AGG | - | chr5_4:61977299-61977318 | None:intergenic | 30.0% | |
| !!! | CTCTGAACTAATGCTTTTTT+TGG | + | chr5_4:61977379-61977398 | Msa0862380:intron | 30.0% |
| !!! | TGAACTAATGCTTTTTTTGG+TGG | + | chr5_4:61977382-61977401 | Msa0862380:intron | 30.0% |
| TCAAATTTATGTAGCTGGTT+TGG | + | chr5_4:61977496-61977515 | Msa0862380:intron | 30.0% | |
| ! | CAAATTTATGTAGCTGGTTT+GGG | + | chr5_4:61977497-61977516 | Msa0862380:intron | 30.0% |
| !!! | GGTCTTTTTTGTTACTCTTA+TGG | + | chr5_4:61977618-61977637 | Msa0862380:intron | 30.0% |
| ACACAACACACATAAATATG+TGG | + | chr5_4:61977711-61977730 | Msa0862380:intron | 30.0% | |
| !! | TATTTGTTTTCACAATGCAC+TGG | - | chr5_4:61977819-61977838 | None:intergenic | 30.0% |
| TAATGAAGGGAATAGAGTAT+GGG | - | chr5_4:61977959-61977978 | None:intergenic | 30.0% | |
| CACCTAAGAGTTTGTAAATT+TGG | + | chr5_4:61978028-61978047 | Msa0862380:intron | 30.0% | |
| AGCCAAATTTACAAACTCTT+AGG | - | chr5_4:61978033-61978052 | None:intergenic | 30.0% | |
| !!! | CTAGCTTTTGAAGTTAAGTT+AGG | - | chr5_4:61978651-61978670 | None:intergenic | 30.0% |
| ! | TATGGTCTTAACAATAAGTG+GGG | - | chr5_4:61978694-61978713 | None:intergenic | 30.0% |
| ! | GATATGGTCTTAACAATAAG+TGG | - | chr5_4:61978696-61978715 | None:intergenic | 30.0% |
| TTCCACATTGGATATTGATA+TGG | - | chr5_4:61978712-61978731 | None:intergenic | 30.0% | |
| TTGCAGTTGTAAAAAAAGAG+TGG | - | chr5_4:61978741-61978760 | None:intergenic | 30.0% | |
| ! | AATGATAGTGTGTATTGGAA+AGG | + | chr5_4:61978759-61978778 | Msa0862380:intron | 30.0% |
| AGGTTCTTGAGAACAATTTA+TGG | + | chr5_4:61978779-61978798 | Msa0862380:intron | 30.0% | |
| GTAAATGGAAAAAGCTATGA+TGG | + | chr5_4:61978813-61978832 | Msa0862380:intron | 30.0% | |
| TTTATCCAAAAAGCTCACAA+AGG | - | chr5_4:61978962-61978981 | None:intergenic | 30.0% | |
| !!! | TCCTTTTTTTCATCTTATGC+AGG | + | chr5_4:61979013-61979032 | Msa0862380:intron | 30.0% |
| TCCTGCATAAGATGAAAAAA+AGG | - | chr5_4:61979017-61979036 | None:intergenic | 30.0% | |
| AAACAAGTGTTAAAAAGGTG+AGG | - | chr5_4:61979319-61979338 | None:intergenic | 30.0% | |
| ! | TACGAAAGGCATAACATAAA+AGG | + | chr5_4:61979380-61979399 | Msa0862380:CDS | 30.0% |
| TCTGTCAAAATCATTTGTTC+TGG | + | chr5_4:61979676-61979695 | Msa0862380:intron | 30.0% | |
| ! | CTGGTTTAAGAGAATTTTGT+TGG | + | chr5_4:61979695-61979714 | Msa0862380:intron | 30.0% |
| !! | ATTTCAAGAAAGCATTAACC+GGG | - | chr5_4:61979802-61979821 | None:intergenic | 30.0% |
| TAGATAATTGTAACATGGGT+GGG | - | chr5_4:61979871-61979890 | None:intergenic | 30.0% | |
| ATAGATAATTGTAACATGGG+TGG | - | chr5_4:61979872-61979891 | None:intergenic | 30.0% | |
| ! | TACTTTTATGCATACCTCTT+CGG | - | chr5_4:61979982-61980001 | None:intergenic | 30.0% |
| CAGAAAATAGAAGGAATTCT+CGG | - | chr5_4:61980024-61980043 | None:intergenic | 30.0% | |
| ! | GAGAATTCCTTCTATTTTCT+GGG | + | chr5_4:61980023-61980042 | Msa0862380:intron | 30.0% |
| AGATTCCCTTTCTTGAAAAT+CGG | - | chr5_4:61980061-61980080 | None:intergenic | 30.0% | |
| AGGGAATCTTATGATATGTT+AGG | + | chr5_4:61980072-61980091 | Msa0862380:intron | 30.0% | |
| ! | AGTTTAAGGCATCATTATCT+GGG | + | chr5_4:61980129-61980148 | Msa0862380:intron | 30.0% |
| TTTATTGCAATTAGGTTTGG+TGG | + | chr5_4:61980194-61980213 | Msa0862380:intron | 30.0% | |
| !! | AGAAGCATTGAACAATTCTA+TGG | - | chr5_4:61980267-61980286 | None:intergenic | 30.0% |
| TTCAATGCTTCTGATTTCTT+AGG | + | chr5_4:61980275-61980294 | Msa0862380:intron | 30.0% | |
| TAGGTACATCTGATTCAATA+AGG | - | chr5_4:61980441-61980460 | None:intergenic | 30.0% | |
| CTGCATTATCCATATAAGAT+GGG | - | chr5_4:61980474-61980493 | None:intergenic | 30.0% | |
| ACTGCATTATCCATATAAGA+TGG | - | chr5_4:61980475-61980494 | None:intergenic | 30.0% | |
| TACTTGTTTGTGTAGTTAGA+AGG | + | chr5_4:61980582-61980601 | Msa0862380:intron | 30.0% | |
| AATTTCTCATGGCTATAAGT+TGG | - | chr5_4:61980620-61980639 | None:intergenic | 30.0% | |
| CCAAAGTACAAAATTTCTCA+TGG | - | chr5_4:61980631-61980650 | None:intergenic | 30.0% | |
| ! | CCATGAGAAATTTTGTACTT+TGG | + | chr5_4:61980628-61980647 | Msa0862380:intron | 30.0% |
| ! | GAAATATATGCTTTAGTTCC+TGG | + | chr5_4:61980913-61980932 | Msa0862380:CDS | 30.0% |
| TATATTGCTGAAGAATGAAG+GGG | - | chr5_4:61981172-61981191 | None:intergenic | 30.0% | |
| GATGCTGATCATTATTATGA+TGG | + | chr5_4:61977156-61977175 | Msa0862380:CDS | 30.0% | |
| ! | TATTATGATGGAAATGAGTC+GGG | + | chr5_4:61977168-61977187 | Msa0862380:CDS | 30.0% |
| ! | TTCAAACCTCCCAAATTTTA+TGG | + | chr5_4:61977258-61977277 | Msa0862380:CDS | 30.0% |
| AGCCATTCTCCATAAAATTT+GGG | - | chr5_4:61977270-61977289 | None:intergenic | 30.0% | |
| AAGCCATTCTCCATAAAATT+TGG | - | chr5_4:61977271-61977290 | None:intergenic | 30.0% | |
| TCAAATTTATGTAGCTGGTT+TGG | + | chr5_4:61977496-61977515 | Msa0862380:intron | 30.0% | |
| ! | CAAATTTATGTAGCTGGTTT+GGG | + | chr5_4:61977497-61977516 | Msa0862380:intron | 30.0% |
| !!! | GGTCTTTTTTGTTACTCTTA+TGG | + | chr5_4:61977618-61977637 | Msa0862380:intron | 30.0% |
| ACACAACACACATAAATATG+TGG | + | chr5_4:61977711-61977730 | Msa0862380:intron | 30.0% | |
| !! | TATTTGTTTTCACAATGCAC+TGG | - | chr5_4:61977819-61977838 | None:intergenic | 30.0% |
| TGCAATGTTGTAAAAAAGAG+TGG | - | chr5_4:61982763-61982782 | None:intergenic | 30.0% | |
| ! | ATTGCAATGATAGTGTGTAT+TGG | + | chr5_4:61982777-61982796 | Msa0862380:intron | 30.0% |
| ! | AATGATAGTGTGTATTGGAA+AGG | + | chr5_4:61978759-61978778 | Msa0862380:intron | 30.0% |
| ! | GTGGTCACATTTTATGTAAA+TGG | + | chr5_4:61982821-61982840 | Msa0862380:intron | 30.0% |
| GTAAATGGAAAAAGCTACAA+TGG | + | chr5_4:61982836-61982855 | Msa0862380:intron | 30.0% | |
| TTTATCCAAAAAGCTCACAA+AGG | - | chr5_4:61978962-61978981 | None:intergenic | 30.0% | |
| AAACAAGTGTTAAAAAGGTG+AGG | - | chr5_4:61979319-61979338 | None:intergenic | 30.0% | |
| ! | GTTGTTTCAAATGTTACTCT+AGG | + | chr5_4:61983416-61983435 | Msa0862380:intron | 30.0% |
| ATGCCTTTCATAATCAAGAA+GGG | - | chr5_4:61983442-61983461 | None:intergenic | 30.0% | |
| TATGCCTTTCATAATCAAGA+AGG | - | chr5_4:61983443-61983462 | None:intergenic | 30.0% | |
| ACATTCAGTTAATAAGATCG+TGG | - | chr5_4:61983602-61983621 | None:intergenic | 30.0% | |
| !!! | GCTTATTTTGCATTTGAAAC+AGG | + | chr5_4:61983631-61983650 | Msa0862380:intron | 30.0% |
| TCTGTCAAAATCATTTGTTC+TGG | + | chr5_4:61979676-61979695 | Msa0862380:intron | 30.0% | |
| ! | CTGGTTTAAGAGAATTTTGT+TGG | + | chr5_4:61979695-61979714 | Msa0862380:intron | 30.0% |
| TACATAATTGTAACATGGGT+GGG | - | chr5_4:61983905-61983924 | None:intergenic | 30.0% | |
| ATACATAATTGTAACATGGG+TGG | - | chr5_4:61983906-61983925 | None:intergenic | 30.0% | |
| ! | TACTTTTATGCATACCTCTT+CGG | - | chr5_4:61979982-61980001 | None:intergenic | 30.0% |
| CAGAAAATAGAAGGAATTCT+CGG | - | chr5_4:61980024-61980043 | None:intergenic | 30.0% | |
| ! | GAGAATTCCTTCTATTTTCT+GGG | + | chr5_4:61980023-61980042 | Msa0862380:intron | 30.0% |
| AGATTCCCTTTCTTGAAAAT+CGG | - | chr5_4:61980061-61980080 | None:intergenic | 30.0% | |
| AGGGAATCTTATGATATGTT+AGG | + | chr5_4:61980072-61980091 | Msa0862380:intron | 30.0% | |
| ! | AGTTTAAGGCATCATTATCT+GGG | + | chr5_4:61980129-61980148 | Msa0862380:intron | 30.0% |
| TTTATTGCAATTAGGTTTGG+TGG | + | chr5_4:61980194-61980213 | Msa0862380:intron | 30.0% | |
| !! | AGAAGCATTGAACAATTCTA+TGG | - | chr5_4:61980267-61980286 | None:intergenic | 30.0% |
| TTCAATGCTTCTGATTTCTT+AGG | + | chr5_4:61980275-61980294 | Msa0862380:intron | 30.0% | |
| TAGGTACATCTGATTCAATA+AGG | - | chr5_4:61980441-61980460 | None:intergenic | 30.0% | |
| CTGCATTATCCATATAAGAT+GGG | - | chr5_4:61980474-61980493 | None:intergenic | 30.0% | |
| ACTGCATTATCCATATAAGA+TGG | - | chr5_4:61980475-61980494 | None:intergenic | 30.0% | |
| TACTTGTTTGTGTAGTTAGA+AGG | + | chr5_4:61980582-61980601 | Msa0862380:intron | 30.0% | |
| AATTTCTCATGGCTATAAGT+TGG | - | chr5_4:61980620-61980639 | None:intergenic | 30.0% | |
| CCAAAGTACAAAATTTCTCA+TGG | - | chr5_4:61980631-61980650 | None:intergenic | 30.0% | |
| ! | CCATGAGAAATTTTGTACTT+TGG | + | chr5_4:61980628-61980647 | Msa0862380:intron | 30.0% |
| !! | AATCTTGCTGGTTTGGAATT+AGG | + | chr5_4:61976718-61976737 | Msa0862380:CDS | 35.0% |
| TGTTAAAATTGGGAAGGAAG+AGG | + | chr5_4:61976840-61976859 | Msa0862380:CDS | 35.0% | |
| !! | ATACCTTCTGAAACAACCTT+GGG | - | chr5_4:61976892-61976911 | None:intergenic | 35.0% |
| !! | AATACCTTCTGAAACAACCT+TGG | - | chr5_4:61976893-61976912 | None:intergenic | 35.0% |
| TGTTCAAGATACCCTTCATT+CGG | + | chr5_4:61976924-61976943 | Msa0862380:CDS | 35.0% | |
| AGGAGCTTGAAAACTTCTTT+AGG | + | chr5_4:61977220-61977239 | Msa0862380:CDS | 35.0% | |
| GGAGCTTGAAAACTTCTTTA+GGG | + | chr5_4:61977221-61977240 | Msa0862380:CDS | 35.0% | |
| ! | TTGAAAACTTCTTTAGGGAG+AGG | + | chr5_4:61977226-61977245 | Msa0862380:CDS | 35.0% |
| CATTCTCCATAAAATTTGGG+AGG | - | chr5_4:61977267-61977286 | None:intergenic | 35.0% | |
| ! | CTCCCAAATTTTATGGAGAA+TGG | + | chr5_4:61977265-61977284 | Msa0862380:CDS | 35.0% |
| !!! | GCTTTTTTTGGTGGAACATA+AGG | + | chr5_4:61977391-61977410 | Msa0862380:intron | 35.0% |
| TTTGGTGGAACATAAGGTTA+TGG | + | chr5_4:61977397-61977416 | Msa0862380:intron | 35.0% | |
| ACCTTCTTACATACTGAAGT+GGG | - | chr5_4:61977777-61977796 | None:intergenic | 35.0% | |
| TACCTTCTTACATACTGAAG+TGG | - | chr5_4:61977778-61977797 | None:intergenic | 35.0% | |
| CCATGAGAGTTCATGATAAT+TGG | - | chr5_4:61977881-61977900 | None:intergenic | 35.0% | |
| CCAATTATCATGAACTCTCA+TGG | + | chr5_4:61977878-61977897 | Msa0862380:intron | 35.0% | |
| !!! | GGGTTTTGTTAATTACTGGA+AGG | + | chr5_4:61977918-61977937 | Msa0862380:intron | 35.0% |
| AATGAAGGGAATAGAGTATG+GGG | - | chr5_4:61977958-61977977 | None:intergenic | 35.0% | |
| GTAATGAAGGGAATAGAGTA+TGG | - | chr5_4:61977960-61977979 | None:intergenic | 35.0% | |
| AAAGATTCCAGGGTAATGAA+GGG | - | chr5_4:61977972-61977991 | None:intergenic | 35.0% | |
| AAAAGATTCCAGGGTAATGA+AGG | - | chr5_4:61977973-61977992 | None:intergenic | 35.0% | |
| ! | ATTTGACGCATTGTTTCTTG+AGG | + | chr5_4:61978115-61978134 | Msa0862380:intron | 35.0% |
| TCTTTCAAACTCCCAAAGTA+AGG | + | chr5_4:61978264-61978283 | Msa0862380:intron | 35.0% | |
| TGCAAGTTAGTCCTTACTTT+GGG | - | chr5_4:61978278-61978297 | None:intergenic | 35.0% | |
| TCATGTCTTGATCTCGTTAA+TGG | + | chr5_4:61978301-61978320 | Msa0862380:intron | 35.0% | |
| CAAGAATAACGGTTGTATGA+GGG | - | chr5_4:61978489-61978508 | None:intergenic | 35.0% | |
| ACAAGAATAACGGTTGTATG+AGG | - | chr5_4:61978490-61978509 | None:intergenic | 35.0% | |
| !! | TAAAAGTATCATGTGTCCGT+TGG | - | chr5_4:61978603-61978622 | None:intergenic | 35.0% |
| ! | AACTTCAAAAGCTAGCTCTT+AGG | + | chr5_4:61978656-61978675 | Msa0862380:intron | 35.0% |
| ! | ACTTCAAAAGCTAGCTCTTA+GGG | + | chr5_4:61978657-61978676 | Msa0862380:intron | 35.0% |
| ! | ATGGTCTTAACAATAAGTGG+GGG | - | chr5_4:61978693-61978712 | None:intergenic | 35.0% |
| GACCATATCAATATCCAATG+TGG | + | chr5_4:61978707-61978726 | Msa0862380:intron | 35.0% | |
| ! | ACTGCAATGATAGTGTGTAT+TGG | + | chr5_4:61978754-61978773 | Msa0862380:intron | 35.0% |
| ! | TGTGTTTCTTTACCCTTTTC+TGG | + | chr5_4:61978932-61978951 | Msa0862380:intron | 35.0% |
| ! | TTTCCGGACATTTTATGAGA+AGG | + | chr5_4:61979059-61979078 | Msa0862380:intron | 35.0% |
| TCACCTTCTCATAAAATGTC+CGG | - | chr5_4:61979065-61979084 | None:intergenic | 35.0% | |
| ATTTATGCGAATTGCTTGAG+TGG | + | chr5_4:61979256-61979275 | Msa0862380:intron | 35.0% | |
| GTTAAAAAGGTGAGGATTAC+AGG | - | chr5_4:61979311-61979330 | None:intergenic | 35.0% | |
| ! | GCTGTTTCAAATGTTACTCT+AGG | + | chr5_4:61979346-61979365 | Msa0862380:intron | 35.0% |
| ATGCCTTTCGTAATCAAGAA+GGG | - | chr5_4:61979372-61979391 | None:intergenic | 35.0% | |
| TATGCCTTTCGTAATCAAGA+AGG | - | chr5_4:61979373-61979392 | None:intergenic | 35.0% | |
| ! | GAAAGGCATAACATAAAAGG+CGG | + | chr5_4:61979383-61979402 | Msa0862380:CDS | 35.0% |
| ! | ACCTGATTTTCAACATTCAC+AGG | - | chr5_4:61979443-61979462 | None:intergenic | 35.0% |
| GCTCATAATCAAGATTGTGT+TGG | + | chr5_4:61979582-61979601 | Msa0862380:intron | 35.0% | |
| CAAGTAGCATTCATATTTCC+CGG | + | chr5_4:61979781-61979800 | Msa0862380:intron | 35.0% | |
| AGATAATTGTAACATGGGTG+GGG | - | chr5_4:61979870-61979889 | None:intergenic | 35.0% | |
| ! | ACTTTTATGCATACCTCTTC+GGG | - | chr5_4:61979981-61980000 | None:intergenic | 35.0% |
| !!! | CATAAAAGTATTTTCCCCCA+AGG | + | chr5_4:61979992-61980011 | Msa0862380:intron | 35.0% |
| ! | CGAGAATTCCTTCTATTTTC+TGG | + | chr5_4:61980022-61980041 | Msa0862380:intron | 35.0% |
| ! | TTCCTTCTATTTTCTGGGTT+TGG | + | chr5_4:61980028-61980047 | Msa0862380:intron | 35.0% |
| TTCCAAACCCAGAAAATAGA+AGG | - | chr5_4:61980033-61980052 | None:intergenic | 35.0% | |
| !!! | AAAGTGCCGATTTTCAAGAA+AGG | + | chr5_4:61980052-61980071 | Msa0862380:intron | 35.0% |
| !!! | AAGTGCCGATTTTCAAGAAA+GGG | + | chr5_4:61980053-61980072 | Msa0862380:intron | 35.0% |
| ! | ATTAGCTGCATTCGAGTTTA+AGG | + | chr5_4:61980115-61980134 | Msa0862380:intron | 35.0% |
| ! | GAGTTTAAGGCATCATTATC+TGG | + | chr5_4:61980128-61980147 | Msa0862380:intron | 35.0% |
| TGCTTCTGATTTCTTAGGAT+AGG | + | chr5_4:61980280-61980299 | Msa0862380:intron | 35.0% | |
| CATACCTATGCTAACATATG+TGG | + | chr5_4:61980674-61980693 | Msa0862380:intron | 35.0% | |
| GGGAAATTCAGCTTATACAA+AGG | + | chr5_4:61981110-61981129 | Msa0862380:intron | 35.0% | |
| TACAATGTTCACCCTTCAAA+AGG | + | chr5_4:61981288-61981307 | Msa0862380:intron | 35.0% | |
| !! | CCGCATCAACAATTTTTCAA+GGG | - | chr5_4:61981376-61981395 | None:intergenic | 35.0% |
| CCCTTGAAAAATTGTTGATG+CGG | + | chr5_4:61981373-61981392 | Msa0862380:intron | 35.0% | |
| ! | ACCGCATCAACAATTTTTCA+AGG | - | chr5_4:61981377-61981396 | None:intergenic | 35.0% |
| ! | TTCGCAGAACATGTTTTTCT+TGG | + | chr5_4:61981406-61981425 | Msa0862380:intron | 35.0% |
| AGGAGCTTGAAAACTTCTTT+AGG | + | chr5_4:61977220-61977239 | Msa0862380:CDS | 35.0% | |
| GGAGCTTGAAAACTTCTTTA+GGG | + | chr5_4:61977221-61977240 | Msa0862380:CDS | 35.0% | |
| ! | TTGAAAACTTCTTTAGGGAG+AGG | + | chr5_4:61977226-61977245 | Msa0862380:CDS | 35.0% |
| CATTCTCCATAAAATTTGGG+AGG | - | chr5_4:61977267-61977286 | None:intergenic | 35.0% | |
| ! | CTCCCAAATTTTATGGAGAA+TGG | + | chr5_4:61977265-61977284 | Msa0862380:CDS | 35.0% |
| !!! | AGCGACAACATTTTAGAATC+TGG | - | chr5_4:61981633-61981652 | None:intergenic | 35.0% |
| !! | ATTCTAAAATGTTGTCGCTC+TGG | + | chr5_4:61981634-61981653 | Msa0862380:intron | 35.0% |
| !!! | CTCTGGACTAATGCTTTTTT+TGG | + | chr5_4:61981651-61981670 | Msa0862380:intron | 35.0% |
| !!! | TGGACTAATGCTTTTTTTGG+TGG | + | chr5_4:61981654-61981673 | Msa0862380:intron | 35.0% |
| !!! | GCTTTTTTTGGTGGAACATA+AGG | + | chr5_4:61977391-61977410 | Msa0862380:intron | 35.0% |
| TTTGGTGGAACATAAGGTTA+TGG | + | chr5_4:61977397-61977416 | Msa0862380:intron | 35.0% | |
| CGTCAAATTTCGCTCATATA+AGG | - | chr5_4:61982190-61982209 | None:intergenic | 35.0% | |
| ATTTGACGCATTCTTTCTCA+AGG | + | chr5_4:61982202-61982221 | Msa0862380:intron | 35.0% | |
| TCTTTCAAACTCCCAAAGTA+AGG | + | chr5_4:61978264-61978283 | Msa0862380:intron | 35.0% | |
| TGCAAGTTAGTCCTTACTTT+GGG | - | chr5_4:61978278-61978297 | None:intergenic | 35.0% | |
| TCATGTCTTGATCTCGTTAA+TGG | + | chr5_4:61978301-61978320 | Msa0862380:intron | 35.0% | |
| CAAGAATAACGGTTGTATGA+GGG | - | chr5_4:61978489-61978508 | None:intergenic | 35.0% | |
| ACAAGAATAACGGTTGTATG+AGG | - | chr5_4:61978490-61978509 | None:intergenic | 35.0% | |
| !! | TAAAAGTATCATGTGTCCGT+TGG | - | chr5_4:61978603-61978622 | None:intergenic | 35.0% |
| ! | TGTGTTTCTTTACCCTTTTC+TGG | + | chr5_4:61978932-61978951 | Msa0862380:intron | 35.0% |
| CCTGCATAAGATGAAAACAA+AGG | - | chr5_4:61983086-61983105 | None:intergenic | 35.0% | |
| !!! | CCTTTGTTTTCATCTTATGC+AGG | + | chr5_4:61983083-61983102 | Msa0862380:intron | 35.0% |
| ! | TTTCCGGAGATTTTATGAGA+AGG | + | chr5_4:61983129-61983148 | Msa0862380:CDS | 35.0% |
| TCACCTTCTCATAAAATCTC+CGG | - | chr5_4:61983135-61983154 | None:intergenic | 35.0% | |
| GTTAAAAAGGTGAGGATTAC+AGG | - | chr5_4:61979311-61979330 | None:intergenic | 35.0% | |
| ! | GAAAGGCATAACATAAAAGG+CGG | + | chr5_4:61979383-61979402 | Msa0862380:CDS | 35.0% |
| ! | ACCTGATTTTCAACATTCAC+AGG | - | chr5_4:61979443-61979462 | None:intergenic | 35.0% |
| ACATAATTGTAACATGGGTG+GGG | - | chr5_4:61983904-61983923 | None:intergenic | 35.0% | |
| ! | ACTTTTATGCATACCTCTTC+GGG | - | chr5_4:61979981-61980000 | None:intergenic | 35.0% |
| !!! | CATAAAAGTATTTTCCCCCA+AGG | + | chr5_4:61979992-61980011 | Msa0862380:intron | 35.0% |
| ! | CGAGAATTCCTTCTATTTTC+TGG | + | chr5_4:61980022-61980041 | Msa0862380:intron | 35.0% |
| ! | TTCCTTCTATTTTCTGGGTT+TGG | + | chr5_4:61980028-61980047 | Msa0862380:intron | 35.0% |
| TTCCAAACCCAGAAAATAGA+AGG | - | chr5_4:61980033-61980052 | None:intergenic | 35.0% | |
| !!! | AAAGTGCCGATTTTCAAGAA+AGG | + | chr5_4:61980052-61980071 | Msa0862380:intron | 35.0% |
| !!! | AAGTGCCGATTTTCAAGAAA+GGG | + | chr5_4:61980053-61980072 | Msa0862380:intron | 35.0% |
| ! | ATTAGCTGCATTCGAGTTTA+AGG | + | chr5_4:61980115-61980134 | Msa0862380:intron | 35.0% |
| ! | GAGTTTAAGGCATCATTATC+TGG | + | chr5_4:61980128-61980147 | Msa0862380:intron | 35.0% |
| TGCTTCTGATTTCTTAGGAT+AGG | + | chr5_4:61980280-61980299 | Msa0862380:intron | 35.0% | |
| CATACCTATGCTAACATATG+TGG | + | chr5_4:61980674-61980693 | Msa0862380:intron | 35.0% | |
| ! | GAAATATATGCTTTAGCTCC+TGG | + | chr5_4:61984963-61984982 | Msa0862380:CDS | 35.0% |
| CTTCTTCTTCTTCTTCTTCT+CGG | - | chr5_4:61985016-61985035 | None:intergenic | 35.0% | |
| TCCTCTACATTAACATTCGC+CGG | - | chr5_4:61976631-61976650 | None:intergenic | 40.0% | |
| GATGCATCTTGAAGTTCAAC+CGG | + | chr5_4:61976771-61976790 | Msa0862380:CDS | 40.0% | |
| GAAGTTTCCTCTACAGTAAC+CGG | - | chr5_4:61976793-61976812 | None:intergenic | 40.0% | |
| GGATGAAAATGTGAAACCCA+AGG | + | chr5_4:61976873-61976892 | Msa0862380:CDS | 40.0% | |
| ! | AAACCCAAGGTTGTTTCAGA+AGG | + | chr5_4:61976886-61976905 | Msa0862380:CDS | 40.0% |
| TCATATGTTGGACACAGCTA+AGG | + | chr5_4:61976963-61976982 | Msa0862380:CDS | 40.0% | |
| CATATGTTGGACACAGCTAA+GGG | + | chr5_4:61976964-61976983 | Msa0862380:CDS | 40.0% | |
| TGAAGATGCTTCTGATGTGA+AGG | + | chr5_4:61976987-61977006 | Msa0862380:CDS | 40.0% | |
| TTCCTGTCCTTGTATCATCA+GGG | - | chr5_4:61977035-61977054 | None:intergenic | 40.0% | |
| ATTCCTGTCCTTGTATCATC+AGG | - | chr5_4:61977036-61977055 | None:intergenic | 40.0% | |
| GCCTGTAGATAATGAAAACC+CGG | + | chr5_4:61977107-61977126 | Msa0862380:CDS | 40.0% | |
| ! | TCCGGGTTTTCATTATCTAC+AGG | - | chr5_4:61977111-61977130 | None:intergenic | 40.0% |
| ! | GCAGCAGAACATGTTTTTCT+TGG | + | chr5_4:61977134-61977153 | Msa0862380:CDS | 40.0% |
| !! | AGCGACAACATTTTAGAAGC+TGG | - | chr5_4:61977361-61977380 | None:intergenic | 40.0% |
| !! | TGGTTGATGGTTAAGCTTGT+TGG | + | chr5_4:61977564-61977583 | Msa0862380:intron | 40.0% |
| TCCCACTTCAGTATGTAAGA+AGG | + | chr5_4:61977773-61977792 | Msa0862380:intron | 40.0% | |
| !! | TTCACAATGCACTGGCATTT+TGG | - | chr5_4:61977811-61977830 | None:intergenic | 40.0% |
| TGTTTCTTGAGGCAAACTAG+CGG | + | chr5_4:61978126-61978145 | Msa0862380:intron | 40.0% | |
| AGGTAACCTCATGTAAGTTG+TGG | + | chr5_4:61978226-61978245 | Msa0862380:intron | 40.0% | |
| TAACCTCATGTAAGTTGTGG+CGG | + | chr5_4:61978229-61978248 | Msa0862380:intron | 40.0% | |
| GTGCAAGTTAGTCCTTACTT+TGG | - | chr5_4:61978279-61978298 | None:intergenic | 40.0% | |
| ! | TAACTCTAAGAGCTAGCTTG+TGG | + | chr5_4:61978452-61978471 | Msa0862380:intron | 40.0% |
| ! | TGGTCTTAACAATAAGTGGG+GGG | - | chr5_4:61978692-61978711 | None:intergenic | 40.0% |
| CACAAAGGATCTCCAGAAAA+GGG | - | chr5_4:61978947-61978966 | None:intergenic | 40.0% | |
| TCACAAAGGATCTCCAGAAA+AGG | - | chr5_4:61978948-61978967 | None:intergenic | 40.0% | |
| ! | GAGATCCTTTGTGAGCTTTT+TGG | + | chr5_4:61978954-61978973 | Msa0862380:intron | 40.0% |
| ATAAAATGTCCGGAAAGTCC+AGG | - | chr5_4:61979055-61979074 | None:intergenic | 40.0% | |
| ! | TTTTCAACATTCACAGGCTC+TGG | - | chr5_4:61979437-61979456 | None:intergenic | 40.0% |
| GCCTGTGAATGTTGAAAATC+AGG | + | chr5_4:61979439-61979458 | Msa0862380:CDS | 40.0% | |
| GGAAGAAGAGCGAAAATTCT+GGG | - | chr5_4:61979849-61979868 | None:intergenic | 40.0% | |
| TGCTACATCATAGGCACATT+GGG | - | chr5_4:61979898-61979917 | None:intergenic | 40.0% | |
| ! | AATTCTCGGATTTTGCCTTG+GGG | - | chr5_4:61980010-61980029 | None:intergenic | 40.0% |
| ! | GAATTCTCGGATTTTGCCTT+GGG | - | chr5_4:61980011-61980030 | None:intergenic | 40.0% |
| TTTATAGCACAAGGAATGGG+AGG | - | chr5_4:61980359-61980378 | None:intergenic | 40.0% | |
| ! | TAAGATGGGCTCTTACGTTT+AGG | - | chr5_4:61980460-61980479 | None:intergenic | 40.0% |
| ACGTAAGAGCCCATCTTATA+TGG | + | chr5_4:61980462-61980481 | Msa0862380:CDS | 40.0% | |
| ATAATGCAGTCAAAGCAGCA+CGG | + | chr5_4:61980485-61980504 | Msa0862380:CDS | 40.0% | |
| ! | TGTCTTAACTGTGGTCTTGA+AGG | - | chr5_4:61980517-61980536 | None:intergenic | 40.0% |
| TCAAGACCACAGTTAAGACA+CGG | + | chr5_4:61980517-61980536 | Msa0862380:intron | 40.0% | |
| GCATCCACATATGTTAGCAT+AGG | - | chr5_4:61980681-61980700 | None:intergenic | 40.0% | |
| TGCTAACATATGTGGATGCT+AGG | + | chr5_4:61980682-61980701 | Msa0862380:intron | 40.0% | |
| AACATATGTGGATGCTAGGT+CGG | + | chr5_4:61980686-61980705 | Msa0862380:intron | 40.0% | |
| ACATATACCCAATCAGCAGA+AGG | - | chr5_4:61980735-61980754 | None:intergenic | 40.0% | |
| ! | TTCTGCTGATTGGGTATATG+TGG | + | chr5_4:61980734-61980753 | Msa0862380:CDS | 40.0% |
| TTGGGTATATGTGGATGCTA+TGG | + | chr5_4:61980743-61980762 | Msa0862380:CDS | 40.0% | |
| ! | ACTTTTACCCAATCAGCAGA+AGG | - | chr5_4:61980780-61980799 | None:intergenic | 40.0% |
| TGAACTTTGCACAACTCCAA+TGG | - | chr5_4:61981077-61981096 | None:intergenic | 40.0% | |
| TTGGAGTTGTGCAAAGTTCA+TGG | + | chr5_4:61981077-61981096 | Msa0862380:intron | 40.0% | |
| ! | TCAGCATAGGACCTTTTGAA+GGG | - | chr5_4:61981302-61981321 | None:intergenic | 40.0% |
| TTCAAAAGGTCCTATGCTGA+GGG | + | chr5_4:61981302-61981321 | Msa0862380:intron | 40.0% | |
| !! | TCTAGTTCTACTCAATGTGC+TGG | - | chr5_4:61981352-61981371 | None:intergenic | 40.0% |
| !! | TGGTTGATGGTTAAGCTTGT+TGG | + | chr5_4:61977564-61977583 | Msa0862380:intron | 40.0% |
| ACCTTCTTACAGACTGAAGT+GGG | - | chr5_4:61982049-61982068 | None:intergenic | 40.0% | |
| TACCTTCTTACAGACTGAAG+TGG | - | chr5_4:61982050-61982069 | None:intergenic | 40.0% | |
| !! | TTCACAATGCACTGGCATTT+TGG | - | chr5_4:61977811-61977830 | None:intergenic | 40.0% |
| !! | AGGCAAATTAGCACTGATGA+TGG | + | chr5_4:61982222-61982241 | Msa0862380:intron | 40.0% |
| !! | AGCACTGATGATGGAACTTT+AGG | + | chr5_4:61982231-61982250 | Msa0862380:intron | 40.0% |
| AGGTAACCTCATGTAAGTTG+TGG | + | chr5_4:61978226-61978245 | Msa0862380:intron | 40.0% | |
| TAACCTCATGTAAGTTGTGG+CGG | + | chr5_4:61978229-61978248 | Msa0862380:intron | 40.0% | |
| GTGCAAGTTAGTCCTTACTT+TGG | - | chr5_4:61978279-61978298 | None:intergenic | 40.0% | |
| ! | TAACTCTAAGAGCTAGCTTG+TGG | + | chr5_4:61978452-61978471 | Msa0862380:intron | 40.0% |
| AGGTTGTTGAGAACAAGTTG+TGG | + | chr5_4:61982802-61982821 | Msa0862380:intron | 40.0% | |
| CACAAAGGATCTCCAGAAAA+GGG | - | chr5_4:61978947-61978966 | None:intergenic | 40.0% | |
| TCACAAAGGATCTCCAGAAA+AGG | - | chr5_4:61978948-61978967 | None:intergenic | 40.0% | |
| ! | GAGATCCTTTGTGAGCTTTT+TGG | + | chr5_4:61978954-61978973 | Msa0862380:intron | 40.0% |
| ATAAAATCTCCGGAAAGTCC+AGG | - | chr5_4:61983125-61983144 | None:intergenic | 40.0% | |
| AGGCCCTTCTTGATTATGAA+AGG | + | chr5_4:61983436-61983455 | Msa0862380:intron | 40.0% | |
| ! | TTTTCAACATTCACAGGCTC+TGG | - | chr5_4:61979437-61979456 | None:intergenic | 40.0% |
| GCCTGTGAATGTTGAAAATC+AGG | + | chr5_4:61979439-61979458 | Msa0862380:CDS | 40.0% | |
| CAAGTAGCATTCGTATTTCC+CGG | + | chr5_4:61983815-61983834 | Msa0862380:intron | 40.0% | |
| GGAAAAGGAGCAAAAATCCT+GGG | - | chr5_4:61983883-61983902 | None:intergenic | 40.0% | |
| TGCTACATCATAGGCACATT+GGG | - | chr5_4:61979898-61979917 | None:intergenic | 40.0% | |
| ! | AATTCTCGGATTTTGCCTTG+GGG | - | chr5_4:61980010-61980029 | None:intergenic | 40.0% |
| ! | GAATTCTCGGATTTTGCCTT+GGG | - | chr5_4:61980011-61980030 | None:intergenic | 40.0% |
| TTTATAGCACAAGGAATGGG+AGG | - | chr5_4:61980359-61980378 | None:intergenic | 40.0% | |
| ! | TAAGATGGGCTCTTACGTTT+AGG | - | chr5_4:61980460-61980479 | None:intergenic | 40.0% |
| ACGTAAGAGCCCATCTTATA+TGG | + | chr5_4:61980462-61980481 | Msa0862380:CDS | 40.0% | |
| ATAATGCAGTCAAAGCAGCA+CGG | + | chr5_4:61980485-61980504 | Msa0862380:CDS | 40.0% | |
| ! | TGTCTTAACTGTGGTCTTGA+AGG | - | chr5_4:61980517-61980536 | None:intergenic | 40.0% |
| TCAAGACCACAGTTAAGACA+CGG | + | chr5_4:61980517-61980536 | Msa0862380:intron | 40.0% | |
| GCATCCACATATGTTAGCAT+AGG | - | chr5_4:61980681-61980700 | None:intergenic | 40.0% | |
| TGCTAACATATGTGGATGCT+AGG | + | chr5_4:61980682-61980701 | Msa0862380:intron | 40.0% | |
| AACATATGTGGATGCTAGGT+CGG | + | chr5_4:61980686-61980705 | Msa0862380:intron | 40.0% | |
| ACATATACCCAATCAGCAGA+AGG | - | chr5_4:61980735-61980754 | None:intergenic | 40.0% | |
| ! | TTCTGCTGATTGGGTATATG+TGG | + | chr5_4:61980734-61980753 | Msa0862380:CDS | 40.0% |
| ATTGGGTATATGTGGATGCT+AGG | + | chr5_4:61980742-61980761 | Msa0862380:CDS | 40.0% | |
| ! | ACTTTTACCCAATCAGCAGA+AGG | - | chr5_4:61980780-61980799 | None:intergenic | 40.0% |
| CGAGAAGAAGAAGAAGAAGA+AGG | + | chr5_4:61985014-61985033 | Msa0862380:CDS | 40.0% | |
| AGAAAACGACAAAGTGGGTC+AGG | + | chr5_4:61976600-61976619 | Msa0862380:CDS | 45.0% | |
| GAAAACGACAAAGTGGGTCA+GGG | + | chr5_4:61976601-61976620 | Msa0862380:CDS | 45.0% | |
| TCCGGCGAATGTTAATGTAG+AGG | + | chr5_4:61976627-61976646 | Msa0862380:CDS | 45.0% | |
| AGTTCAACCGGTTACTGTAG+AGG | + | chr5_4:61976783-61976802 | Msa0862380:CDS | 45.0% | |
| AGATACCCTTCATTCGGTTG+AGG | + | chr5_4:61976930-61976949 | Msa0862380:CDS | 45.0% | |
| AGATGCTTCTGATGTGAAGG+TGG | + | chr5_4:61976990-61977009 | Msa0862380:CDS | 45.0% | |
| !!! | ATCAGGGGCAGGAAGTTTTT+TGG | - | chr5_4:61977019-61977038 | None:intergenic | 45.0% |
| TCCTGTCCTTGTATCATCAG+GGG | - | chr5_4:61977034-61977053 | None:intergenic | 45.0% | |
| AACATGTTCTGCTGCGAATC+CGG | - | chr5_4:61977129-61977148 | None:intergenic | 45.0% | |
| AAATGAGTCGGGAACAGAAG+AGG | + | chr5_4:61977179-61977198 | Msa0862380:CDS | 45.0% | |
| ! | GGACCAAGCAGCTTTTATGA+AGG | + | chr5_4:61977200-61977219 | Msa0862380:CDS | 45.0% |
| GCTCCTTCATAAAAGCTGCT+TGG | - | chr5_4:61977206-61977225 | None:intergenic | 45.0% | |
| ! | CTTCTTTAGGGAGAGGAGTA+TGG | + | chr5_4:61977233-61977252 | Msa0862380:CDS | 45.0% |
| ATGGAGAGCTGTGATGAGAT+TGG | + | chr5_4:61977416-61977435 | Msa0862380:CDS | 45.0% | |
| TGGAGAGCTGTGATGAGATT+GGG | + | chr5_4:61977417-61977436 | Msa0862380:CDS | 45.0% | |
| CTCTATTCCCTTCATTACCC+TGG | + | chr5_4:61977962-61977981 | Msa0862380:intron | 45.0% | |
| ATGTCCAGTCCTAGGCATAA+GGG | - | chr5_4:61978537-61978556 | None:intergenic | 45.0% | |
| AACCGTGAAGTTTGCATGCT+TGG | + | chr5_4:61978560-61978579 | Msa0862380:intron | 45.0% | |
| ACCGTGAAGTTTGCATGCTT+GGG | + | chr5_4:61978561-61978580 | Msa0862380:intron | 45.0% | |
| CATTTGCAGGTGTGATCCAA+CGG | + | chr5_4:61978584-61978603 | Msa0862380:intron | 45.0% | |
| AGGCCCTTCTTGATTACGAA+AGG | + | chr5_4:61979366-61979385 | Msa0862380:intron | 45.0% | |
| GGGAAGAAGAGCGAAAATTC+TGG | - | chr5_4:61979850-61979869 | None:intergenic | 45.0% | |
| GTGCTACATCATAGGCACAT+TGG | - | chr5_4:61979899-61979918 | None:intergenic | 45.0% | |
| ACACTAGCTAATAGTCCTCC+TGG | - | chr5_4:61979921-61979940 | None:intergenic | 45.0% | |
| TAGTCTAGATCAACCCGAAG+AGG | + | chr5_4:61979965-61979984 | Msa0862380:intron | 45.0% | |
| ! | ATTCTCGGATTTTGCCTTGG+GGG | - | chr5_4:61980009-61980028 | None:intergenic | 45.0% |
| ! | GGAATTCTCGGATTTTGCCT+TGG | - | chr5_4:61980012-61980031 | None:intergenic | 45.0% |
| !! | GCAGCTTAAGAGCATCAGTA+TGG | + | chr5_4:61980332-61980351 | Msa0862380:intron | 45.0% |
| GAGTATCCGTGTCTTAACTG+TGG | - | chr5_4:61980526-61980545 | None:intergenic | 45.0% | |
| ACATATGTGGATGCTAGGTC+GGG | + | chr5_4:61980687-61980706 | Msa0862380:intron | 45.0% | |
| ACATAGGACCTTCTGCTGAT+TGG | + | chr5_4:61980724-61980743 | Msa0862380:CDS | 45.0% | |
| ! | CATAGGACCTTCTGCTGATT+GGG | + | chr5_4:61980725-61980744 | Msa0862380:CDS | 45.0% |
| GTGGATGCTATGGTTGACAT+AGG | + | chr5_4:61980753-61980772 | Msa0862380:CDS | 45.0% | |
| ACATAGGACCTTCTGCTGAT+TGG | + | chr5_4:61980724-61980743 | Msa0862380:CDS | 45.0% | |
| ! | CATAGGACCTTCTGCTGATT+GGG | + | chr5_4:61980725-61980744 | Msa0862380:CDS | 45.0% |
| AACTCCAATGGCAACTCTCA+CGG | - | chr5_4:61981065-61981084 | None:intergenic | 45.0% | |
| GAGTTGTGCAAAGTTCATGG+CGG | + | chr5_4:61981080-61981099 | Msa0862380:intron | 45.0% | |
| ! | CTCAGCATAGGACCTTTTGA+AGG | - | chr5_4:61981303-61981322 | None:intergenic | 45.0% |
| CTTCAAAAGGTCCTATGCTG+AGG | + | chr5_4:61981301-61981320 | Msa0862380:intron | 45.0% | |
| ATGACAGATACCCTCAGCAT+AGG | - | chr5_4:61981315-61981334 | None:intergenic | 45.0% | |
| !! | TGCTGAGGGTATCTGTCATT+AGG | + | chr5_4:61981316-61981335 | Msa0862380:intron | 45.0% |
| AAATGAGTCGGGAACAGAAG+AGG | + | chr5_4:61977179-61977198 | Msa0862380:CDS | 45.0% | |
| ! | GGACCAAGCAGCTTTTATGA+AGG | + | chr5_4:61977200-61977219 | Msa0862380:CDS | 45.0% |
| GCTCCTTCATAAAAGCTGCT+TGG | - | chr5_4:61977206-61977225 | None:intergenic | 45.0% | |
| ! | CTTCTTTAGGGAGAGGAGTA+TGG | + | chr5_4:61977233-61977252 | Msa0862380:CDS | 45.0% |
| ATGGAGAGCTGTGATGAGAT+TGG | + | chr5_4:61977416-61977435 | Msa0862380:CDS | 45.0% | |
| TGGAGAGCTGTGATGAGATT+GGG | + | chr5_4:61977417-61977436 | Msa0862380:CDS | 45.0% | |
| TCCCACTTCAGTCTGTAAGA+AGG | + | chr5_4:61982045-61982064 | Msa0862380:intron | 45.0% | |
| ATGTCCAGTCCTAGGCATAA+GGG | - | chr5_4:61978537-61978556 | None:intergenic | 45.0% | |
| AACCGTGAAGTTTGCATGCT+TGG | + | chr5_4:61978560-61978579 | Msa0862380:intron | 45.0% | |
| ACCGTGAAGTTTGCATGCTT+GGG | + | chr5_4:61978561-61978580 | Msa0862380:intron | 45.0% | |
| CATTTGCAGGTGTGATCCAA+CGG | + | chr5_4:61978584-61978603 | Msa0862380:intron | 45.0% | |
| ATTTGCGCGAATTGCTTGAG+TGG | + | chr5_4:61983326-61983345 | Msa0862380:intron | 45.0% | |
| ACAGGACTGCATCATTCTGA+AGG | - | chr5_4:61979293-61979312 | None:intergenic | 45.0% | |
| TAAGGAGCTATCTGTTTCCC+AGG | + | chr5_4:61983863-61983882 | Msa0862380:intron | 45.0% | |
| GGGAAAAGGAGCAAAAATCC+TGG | - | chr5_4:61983884-61983903 | None:intergenic | 45.0% | |
| TTGTAACATGGGTGGGGAAA+AGG | - | chr5_4:61983898-61983917 | None:intergenic | 45.0% | |
| GTGCTACATCATAGGCACAT+TGG | - | chr5_4:61979899-61979918 | None:intergenic | 45.0% | |
| ACACTAGCTAATAGTCCTCC+TGG | - | chr5_4:61979921-61979940 | None:intergenic | 45.0% | |
| TAGTCTAGATCAACCCGAAG+AGG | + | chr5_4:61979965-61979984 | Msa0862380:intron | 45.0% | |
| ! | ATTCTCGGATTTTGCCTTGG+GGG | - | chr5_4:61980009-61980028 | None:intergenic | 45.0% |
| ! | GGAATTCTCGGATTTTGCCT+TGG | - | chr5_4:61980012-61980031 | None:intergenic | 45.0% |
| !! | GCAGCTTAAGAGCATCAGTA+TGG | + | chr5_4:61980332-61980351 | Msa0862380:intron | 45.0% |
| GAGTATCCGTGTCTTAACTG+TGG | - | chr5_4:61980526-61980545 | None:intergenic | 45.0% | |
| ACATATGTGGATGCTAGGTC+GGG | + | chr5_4:61980687-61980706 | Msa0862380:intron | 45.0% | |
| ACATAGGACCTTCTGCTGAT+TGG | + | chr5_4:61980724-61980743 | Msa0862380:CDS | 45.0% | |
| ! | CATAGGACCTTCTGCTGATT+GGG | + | chr5_4:61980725-61980744 | Msa0862380:CDS | 45.0% |
| GGTATATGTGGATGCTAGGT+CGG | + | chr5_4:61984780-61984799 | Msa0862380:CDS | 45.0% | |
| GTATATGTGGATGCTAGGTC+GGG | + | chr5_4:61984781-61984800 | Msa0862380:CDS | 45.0% | |
| ACATAGGACCTTCTGCTGAT+TGG | + | chr5_4:61980724-61980743 | Msa0862380:CDS | 45.0% | |
| ! | CATAGGACCTTCTGCTGATT+GGG | + | chr5_4:61980725-61980744 | Msa0862380:CDS | 45.0% |
| !!! | TTTATATCATTTTAAAATTT+TGG | + | chr5_4:61978619-61978638 | Msa0862380:intron | 5.0% |
| !!! | TTTATATCATTTTAAAATTT+TGG | + | chr5_4:61978619-61978638 | Msa0862380:intron | 5.0% |
| GAGGAAGCTGACCATGTCAT+TGG | + | chr5_4:61976646-61976665 | Msa0862380:CDS | 50.0% | |
| TACCCTTCATTCGGTTGAGG+CGG | + | chr5_4:61976933-61976952 | Msa0862380:CDS | 50.0% | |
| TTCCTGCCCCTGATGATACA+AGG | + | chr5_4:61977025-61977044 | Msa0862380:CDS | 50.0% | |
| ACATGTTCTGCTGCGAATCC+GGG | - | chr5_4:61977128-61977147 | None:intergenic | 50.0% | |
| AGAGCTGTGATGAGATTGGG+AGG | + | chr5_4:61977420-61977439 | Msa0862380:CDS | 50.0% | |
| GAGATTGGGAGGCTATGAGA+AGG | + | chr5_4:61977431-61977450 | Msa0862380:CDS | 50.0% | |
| AAGGGAATAGAGTATGGGGC+AGG | - | chr5_4:61977954-61977973 | None:intergenic | 50.0% | |
| ACTCCGCCACAACTTACATG+AGG | - | chr5_4:61978235-61978254 | None:intergenic | 50.0% | |
| ! | ATGTAAGTTGTGGCGGAGTG+TGG | + | chr5_4:61978236-61978255 | Msa0862380:intron | 50.0% |
| ! | TGTAAGTTGTGGCGGAGTGT+GGG | + | chr5_4:61978237-61978256 | Msa0862380:intron | 50.0% |
| ! | AAGAGCTAGCTTGTGGAGTG+AGG | + | chr5_4:61978459-61978478 | Msa0862380:intron | 50.0% |
| GATGTCCAGTCCTAGGCATA+AGG | - | chr5_4:61978538-61978557 | None:intergenic | 50.0% | |
| GCCCAAGCATGCAAACTTCA+CGG | - | chr5_4:61978565-61978584 | None:intergenic | 50.0% | |
| TTGCATGCTTGGGCATTTGC+AGG | + | chr5_4:61978571-61978590 | Msa0862380:intron | 50.0% | |
| GAGTGGTAAGCGTTCCACAT+TGG | - | chr5_4:61978724-61978743 | None:intergenic | 50.0% | |
| CCACAGTTTCCTGGACTTTC+CGG | + | chr5_4:61979043-61979062 | Msa0862380:intron | 50.0% | |
| ! | TCAACATTCACAGGCTCTGG+AGG | - | chr5_4:61979434-61979453 | None:intergenic | 50.0% |
| TGTGCCTATGATGTAGCACC+AGG | + | chr5_4:61979900-61979919 | Msa0862380:intron | 50.0% | |
| !! | TCCTCCTGGTGCTACATCAT+AGG | - | chr5_4:61979907-61979926 | None:intergenic | 50.0% |
| GGAACAGCTGTGGTTGACAT+AGG | + | chr5_4:61980708-61980727 | Msa0862380:CDS | 50.0% | |
| ! | CTTTAGTTCCTGGCCTTCTG+CGG | + | chr5_4:61980923-61980942 | Msa0862380:CDS | 50.0% |
| ! | TTTAGTTCCTGGCCTTCTGC+GGG | + | chr5_4:61980924-61980943 | Msa0862380:CDS | 50.0% |
| AATGGCAACTCTCACGGGAA+GGG | - | chr5_4:61981059-61981078 | None:intergenic | 50.0% | |
| ACTCCAATGGCAACTCTCAC+GGG | - | chr5_4:61981064-61981083 | None:intergenic | 50.0% | |
| ! | TGCAAAGTTCATGGCGGAGT+GGG | + | chr5_4:61981086-61981105 | Msa0862380:intron | 50.0% |
| AGAGCTGTGATGAGATTGGG+AGG | + | chr5_4:61977420-61977439 | Msa0862380:CDS | 50.0% | |
| GAGATTGGGAGGCTATGAGA+AGG | + | chr5_4:61977431-61977450 | Msa0862380:CDS | 50.0% | |
| ACTCCGCCACAACTTACATG+AGG | - | chr5_4:61978235-61978254 | None:intergenic | 50.0% | |
| ! | ATGTAAGTTGTGGCGGAGTG+TGG | + | chr5_4:61978236-61978255 | Msa0862380:intron | 50.0% |
| ! | TGTAAGTTGTGGCGGAGTGT+GGG | + | chr5_4:61978237-61978256 | Msa0862380:intron | 50.0% |
| ! | AAGAGCTAGCTTGTGGAGTG+AGG | + | chr5_4:61978459-61978478 | Msa0862380:intron | 50.0% |
| GATGTCCAGTCCTAGGCATA+AGG | - | chr5_4:61978538-61978557 | None:intergenic | 50.0% | |
| GCCCAAGCATGCAAACTTCA+CGG | - | chr5_4:61978565-61978584 | None:intergenic | 50.0% | |
| TTGCATGCTTGGGCATTTGC+AGG | + | chr5_4:61978571-61978590 | Msa0862380:intron | 50.0% | |
| CCACAGTTTCCTGGACTTTC+CGG | + | chr5_4:61979043-61979062 | Msa0862380:intron | 50.0% | |
| ! | TCAACATTCACAGGCTCTGG+AGG | - | chr5_4:61979434-61979453 | None:intergenic | 50.0% |
| TGTGCCTATGATGTAGCACC+AGG | + | chr5_4:61979900-61979919 | Msa0862380:intron | 50.0% | |
| !! | TCCTCCTGGTGCTACATCAT+AGG | - | chr5_4:61979907-61979926 | None:intergenic | 50.0% |
| GGAACAGCTGTGGTTGACAT+AGG | + | chr5_4:61980708-61980727 | Msa0862380:CDS | 50.0% | |
| GGAACAGCTGTGGTTGACAT+AGG | + | chr5_4:61980708-61980727 | Msa0862380:CDS | 50.0% | |
| ! | CAAAGTGGGTCAGGGTGTTC+CGG | + | chr5_4:61976609-61976628 | Msa0862380:CDS | 55.0% |
| ! | GAAGGAAGAGGTGCATGCTG+AGG | + | chr5_4:61976852-61976871 | Msa0862380:CDS | 55.0% |
| AGCCGCCTCAACCGAATGAA+GGG | - | chr5_4:61976938-61976957 | None:intergenic | 55.0% | |
| GGCGGCTGATGCTCATATGT+TGG | + | chr5_4:61976951-61976970 | Msa0862380:CDS | 55.0% | |
| GTCCTTGTATCATCAGGGGC+AGG | - | chr5_4:61977030-61977049 | None:intergenic | 55.0% | |
| GCCCCTGATGATACAAGGAC+AGG | + | chr5_4:61977030-61977049 | Msa0862380:CDS | 55.0% | |
| GAATAGAGTATGGGGCAGGC+TGG | - | chr5_4:61977950-61977969 | None:intergenic | 55.0% | |
| ACATCCCCTCCCTTATGCCT+AGG | + | chr5_4:61978525-61978544 | Msa0862380:intron | 55.0% | |
| CAGTCCTAGGCATAAGGGAG+GGG | - | chr5_4:61978532-61978551 | None:intergenic | 55.0% | |
| CCAGTCCTAGGCATAAGGGA+GGG | - | chr5_4:61978533-61978552 | None:intergenic | 55.0% | |
| TCCAGTCCTAGGCATAAGGG+AGG | - | chr5_4:61978534-61978553 | None:intergenic | 55.0% | |
| CGGTTCAGATGTCCAGTCCT+AGG | - | chr5_4:61978545-61978564 | None:intergenic | 55.0% | |
| GGACATGCACCACAGTTTCC+TGG | + | chr5_4:61979034-61979053 | Msa0862380:intron | 55.0% | |
| CCGGAAAGTCCAGGAAACTG+TGG | - | chr5_4:61979046-61979065 | None:intergenic | 55.0% | |
| GCCTATGATGTAGCACCAGG+AGG | + | chr5_4:61979903-61979922 | Msa0862380:intron | 55.0% | |
| ATGGCAACTCTCACGGGAAG+GGG | - | chr5_4:61981058-61981077 | None:intergenic | 55.0% | |
| CAATGGCAACTCTCACGGGA+AGG | - | chr5_4:61981060-61981079 | None:intergenic | 55.0% | |
| CTTCCCGTGAGAGTTGCCAT+TGG | + | chr5_4:61981058-61981077 | Msa0862380:intron | 55.0% | |
| ! | GTGCAAAGTTCATGGCGGAG+TGG | + | chr5_4:61981085-61981104 | Msa0862380:intron | 55.0% |
| ! | AAAGTTCATGGCGGAGTGGG+TGG | + | chr5_4:61981089-61981108 | Msa0862380:intron | 55.0% |
| ! | AAGTTCATGGCGGAGTGGGT+GGG | + | chr5_4:61981090-61981109 | Msa0862380:intron | 55.0% |
| ACATCCCCTCCCTTATGCCT+AGG | + | chr5_4:61978525-61978544 | Msa0862380:intron | 55.0% | |
| CAGTCCTAGGCATAAGGGAG+GGG | - | chr5_4:61978532-61978551 | None:intergenic | 55.0% | |
| CCAGTCCTAGGCATAAGGGA+GGG | - | chr5_4:61978533-61978552 | None:intergenic | 55.0% | |
| TCCAGTCCTAGGCATAAGGG+AGG | - | chr5_4:61978534-61978553 | None:intergenic | 55.0% | |
| CGGTTCAGATGTCCAGTCCT+AGG | - | chr5_4:61978545-61978564 | None:intergenic | 55.0% | |
| GGACTTGCACCACAGTTTCC+TGG | + | chr5_4:61983104-61983123 | Msa0862380:intron | 55.0% | |
| CCGGAAAGTCCAGGAAACTG+TGG | - | chr5_4:61979046-61979065 | None:intergenic | 55.0% | |
| GCCTATGATGTAGCACCAGG+AGG | + | chr5_4:61979903-61979922 | Msa0862380:intron | 55.0% | |
| ! | CTTTAGCTCCTGGCCTTCTG+CGG | + | chr5_4:61984973-61984992 | Msa0862380:CDS | 55.0% |
| ! | TTTAGCTCCTGGCCTTCTGC+GGG | + | chr5_4:61984974-61984993 | Msa0862380:CDS | 55.0% |
| CAGCCGCCTCAACCGAATGA+AGG | - | chr5_4:61976939-61976958 | None:intergenic | 60.0% | |
| CCCTCCCTTATGCCTAGGAC+TGG | + | chr5_4:61978530-61978549 | Msa0862380:intron | 60.0% | |
| !! | GGCTCTGGAGGAGATGCGAT+AGG | - | chr5_4:61979422-61979441 | None:intergenic | 60.0% |
| TGCTAGGTCGGGAACAGCTG+TGG | + | chr5_4:61980698-61980717 | Msa0862380:intron | 60.0% | |
| CCCTCCCTTATGCCTAGGAC+TGG | + | chr5_4:61978530-61978549 | Msa0862380:intron | 60.0% | |
| !! | GGCTCTGGAGGAGATGCGAT+AGG | - | chr5_4:61979422-61979441 | None:intergenic | 60.0% |
| TGCTAGGTCGGGAACAGCTG+TGG | + | chr5_4:61980698-61980717 | Msa0862380:intron | 60.0% | |
| TGCTAGGTCGGGAACAGCTG+TGG | + | chr5_4:61980698-61980717 | Msa0862380:intron | 60.0% | |
| ! | AGTTCCTGGCCTTCTGCGGG+AGG | + | chr5_4:61980927-61980946 | Msa0862380:CDS | 65.0% |
| GCAGTACCTCCTCCCGCAGA+AGG | - | chr5_4:61980939-61980958 | None:intergenic | 65.0% | |
| CTCCAACCTCCTCCCGCAGA+AGG | - | chr5_4:61984989-61985008 | None:intergenic | 65.0% | |
| ! | TCCTGGCCTTCTGCGGGAGG+AGG | + | chr5_4:61980930-61980949 | Msa0862380:CDS | 70.0% |
| ACCTCCTCCCGCAGAAGGCC+AGG | - | chr5_4:61980934-61980953 | None:intergenic | 70.0% | |
| ! | AGCTCCTGGCCTTCTGCGGG+AGG | + | chr5_4:61984977-61984996 | Msa0862380:CDS | 70.0% |
| ! | TCCTGGCCTTCTGCGGGAGG+AGG | + | chr5_4:61980930-61980949 | Msa0862380:CDS | 70.0% |
| ACCTCCTCCCGCAGAAGGCC+AGG | - | chr5_4:61980934-61980953 | None:intergenic | 70.0% | |
| GGCCTTCTGCGGGAGGAGGT+TGG | + | chr5_4:61980934-61980953 | Msa0862380:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 61976586 | 61985046 | 61976586 | ID=Msa0862380;Name=Msa0862380 |
| chr5_4 | mRNA | 61976586 | 61985046 | 61976586 | ID=Msa0862380-mRNA-1;Parent=Msa0862380;Name=Msa0862380-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0|0|0.71|1|1|14|0|596 |
| chr5_4 | exon | 61976586 | 61977301 | 61976586 | ID=Msa0862380-mRNA-1:exon:19243;Parent=Msa0862380-mRNA-1 |
| chr5_4 | exon | 61977413 | 61977452 | 61977413 | ID=Msa0862380-mRNA-1:exon:19244;Parent=Msa0862380-mRNA-1 |
| chr5_4 | exon | 61979368 | 61979460 | 61979368 | ID=Msa0862380-mRNA-1:exon:19245;Parent=Msa0862380-mRNA-1 |
| chr5_4 | exon | 61980297 | 61980348 | 61980297 | ID=Msa0862380-mRNA-1:exon:19246;Parent=Msa0862380-mRNA-1 |
| chr5_4 | exon | 61980452 | 61980527 | 61980452 | ID=Msa0862380-mRNA-1:exon:19247;Parent=Msa0862380-mRNA-1 |
| chr5_4 | exon | 61980704 | 61980815 | 61980704 | ID=Msa0862380-mRNA-1:exon:19248;Parent=Msa0862380-mRNA-1 |
| chr5_4 | exon | 61980901 | 61980951 | 61980901 | ID=Msa0862380-mRNA-1:exon:19249;Parent=Msa0862380-mRNA-1 |
| chr5_4 | exon | 61981413 | 61981573 | 61981413 | ID=Msa0862380-mRNA-1:exon:19250;Parent=Msa0862380-mRNA-1 |
| chr5_4 | exon | 61983105 | 61983150 | 61983105 | ID=Msa0862380-mRNA-1:exon:19251;Parent=Msa0862380-mRNA-1 |
| chr5_4 | exon | 61983438 | 61983530 | 61983438 | ID=Msa0862380-mRNA-1:exon:19252;Parent=Msa0862380-mRNA-1 |
| chr5_4 | exon | 61984331 | 61984382 | 61984331 | ID=Msa0862380-mRNA-1:exon:19253;Parent=Msa0862380-mRNA-1 |
| chr5_4 | exon | 61984486 | 61984561 | 61984486 | ID=Msa0862380-mRNA-1:exon:19254;Parent=Msa0862380-mRNA-1 |
| chr5_4 | exon | 61984738 | 61984864 | 61984738 | ID=Msa0862380-mRNA-1:exon:19255;Parent=Msa0862380-mRNA-1 |
| chr5_4 | exon | 61984951 | 61985046 | 61984951 | ID=Msa0862380-mRNA-1:exon:19256;Parent=Msa0862380-mRNA-1 |
| chr5_4 | CDS | 61976586 | 61977301 | 61976586 | ID=Msa0862380-mRNA-1:cds;Parent=Msa0862380-mRNA-1 |
| chr5_4 | CDS | 61977413 | 61977452 | 61977413 | ID=Msa0862380-mRNA-1:cds;Parent=Msa0862380-mRNA-1 |
| chr5_4 | CDS | 61979368 | 61979460 | 61979368 | ID=Msa0862380-mRNA-1:cds;Parent=Msa0862380-mRNA-1 |
| chr5_4 | CDS | 61980297 | 61980348 | 61980297 | ID=Msa0862380-mRNA-1:cds;Parent=Msa0862380-mRNA-1 |
| chr5_4 | CDS | 61980452 | 61980527 | 61980452 | ID=Msa0862380-mRNA-1:cds;Parent=Msa0862380-mRNA-1 |
| chr5_4 | CDS | 61980704 | 61980815 | 61980704 | ID=Msa0862380-mRNA-1:cds;Parent=Msa0862380-mRNA-1 |
| chr5_4 | CDS | 61980901 | 61980951 | 61980901 | ID=Msa0862380-mRNA-1:cds;Parent=Msa0862380-mRNA-1 |
| chr5_4 | CDS | 61981413 | 61981573 | 61981413 | ID=Msa0862380-mRNA-1:cds;Parent=Msa0862380-mRNA-1 |
| chr5_4 | CDS | 61983105 | 61983150 | 61983105 | ID=Msa0862380-mRNA-1:cds;Parent=Msa0862380-mRNA-1 |
| chr5_4 | CDS | 61983438 | 61983530 | 61983438 | ID=Msa0862380-mRNA-1:cds;Parent=Msa0862380-mRNA-1 |
| chr5_4 | CDS | 61984331 | 61984382 | 61984331 | ID=Msa0862380-mRNA-1:cds;Parent=Msa0862380-mRNA-1 |
| chr5_4 | CDS | 61984486 | 61984561 | 61984486 | ID=Msa0862380-mRNA-1:cds;Parent=Msa0862380-mRNA-1 |
| chr5_4 | CDS | 61984738 | 61984864 | 61984738 | ID=Msa0862380-mRNA-1:cds;Parent=Msa0862380-mRNA-1 |
| chr5_4 | CDS | 61984951 | 61985046 | 61984951 | ID=Msa0862380-mRNA-1:cds;Parent=Msa0862380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
