AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0863000


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0863000 MtrunA17_Chr7g0224601 90.942 276 23 1 23 296 1 276 1.76e-177 492
Msa0863000 MtrunA17_Chr1g0177151 65.625 256 82 2 16 271 4 253 3.62e-114 330
Msa0863000 MtrunA17_Chr8g0392781 57.413 317 98 3 15 296 3 317 6.25e-114 333
Msa0863000 MtrunA17_Chr3g0099561 67.206 247 79 1 50 296 26 270 5.82e-110 320
Msa0863000 MtrunA17_Chr6g0477171 65.421 214 64 2 71 276 45 256 2.09e-90 269
Msa0863000 MtrunA17_Chr5g0444621 67.476 206 65 1 90 295 60 263 3.20e-89 266
Msa0863000 MtrunA17_Chr3g0083821 60.909 110 39 1 66 175 14 119 4.42e-38 131
Msa0863000 MtrunA17_Chr3g0083811 58.763 97 40 0 200 296 1 97 1.78e-30 110
Msa0863000 MtrunA17_Chr5g0444631 84.615 52 8 0 124 175 4 55 1.68e-25 96.3
Msa0863000 MtrunA17_Chr6g0477181 68.421 57 18 0 15 71 3 59 2.14e-17 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0863000 AT3G20800.1 62.782 266 97 1 31 296 20 283 5.69e-107 314
Msa0863000 AT5G12980.1 57.091 275 114 2 21 295 8 278 2.89e-98 291
Msa0863000 AT2G32550.2 36.752 234 140 3 65 291 67 299 2.24e-37 135
Msa0863000 AT2G32550.3 37.220 223 132 3 76 291 39 260 3.20e-37 134
Msa0863000 AT2G32550.1 38.764 178 106 2 116 291 29 205 5.74e-34 124

Find 41 sgRNAs with CRISPR-Local

Find 621 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGACCTTGCACCTTTATTA+TGG 0.198406 5_4:-62735872 Msa0863000:CDS
AAGAAAATCTATGCTTTCTT+TGG 0.224454 5_4:+62727259 None:intergenic
CAAGTCTTAAATGCTCAAAT+TGG 0.237750 5_4:+62728011 None:intergenic
GCGTCGTTTGTAAGTGCTTT+AGG 0.241750 5_4:-62737477 Msa0863000:CDS
AACTCAGCAATCCTGATCTA+AGG 0.276656 5_4:-62737392 Msa0863000:CDS
CCTTTATTATGGAATTCTTA+TGG 0.279542 5_4:-62735861 Msa0863000:CDS
TCCACTATGCCTACGCAATA+TGG 0.291680 5_4:-62727219 Msa0863000:CDS
CAATGTTCTGGCACTACTTC+AGG 0.316358 5_4:-62728610 Msa0863000:intron
GGGCTTGCAATGCATTAAAA+AGG 0.353362 5_4:-62726734 Msa0863000:CDS
CCATAAGAATTCCATAATAA+AGG 0.371929 5_4:+62735861 None:intergenic
CATAATAAAGGTGCAAGGTC+TGG 0.376558 5_4:+62735873 None:intergenic
CATTTAAGACTTGCTAGTCT+TGG 0.419357 5_4:-62728001 Msa0863000:CDS
CTAACTCGCTTGTCGTTTGA+AGG 0.424446 5_4:+62728035 None:intergenic
TTGTGCAGTGGTGCTAGATT+GGG 0.436163 5_4:+62737446 None:intergenic
TCGCTTGTCGTTTGAAGGAA+TGG 0.449153 5_4:+62728040 None:intergenic
TGCCTACGCAATATGGAAAT+CGG 0.453703 5_4:-62727212 Msa0863000:CDS
TTTGTGCAGTGGTGCTAGAT+TGG 0.458174 5_4:+62737445 None:intergenic
AACTCGTGTGTGCAATGTTC+TGG 0.463403 5_4:-62728622 Msa0863000:CDS
TATTGAGTAGGTGATATTAC+AGG 0.479850 5_4:+62737543 None:intergenic
AAAATTCTGTCAGATGATGA+TGG 0.480571 5_4:-62726999 Msa0863000:CDS
TGCTCTTCGTGTTCTCTCCA+AGG 0.482455 5_4:-62737364 Msa0863000:intron
AAGTCTTAAATGCTCAAATT+GGG 0.487572 5_4:+62728012 None:intergenic
TGCACAAAGCATGGCATCCA+TGG 0.501829 5_4:-62737430 Msa0863000:CDS
TTCAAGAACAAGGCGTTCCA+TGG 0.504073 5_4:+62737413 None:intergenic
GATGGTTTGATTTATATTTG+TGG 0.512982 5_4:-62726981 Msa0863000:CDS
AGATTCAACAGCGGTAGAGT+AGG 0.549429 5_4:+62728660 None:intergenic
TCCATATTGCGTAGGCATAG+TGG 0.549999 5_4:+62727218 None:intergenic
GGATGCCATGCTTTGTGCAG+TGG 0.561228 5_4:+62737434 None:intergenic
ACTCAGCAATCCTGATCTAA+GGG 0.564912 5_4:-62737391 Msa0863000:CDS
CTTGCTAGTCTTGGAGTCAT+CGG 0.568027 5_4:-62727992 Msa0863000:CDS
AGTTTCATCAATCGATGTGA+AGG 0.577131 5_4:+62726891 None:intergenic
TGCCGATTTCCATATTGCGT+AGG 0.589680 5_4:+62727210 None:intergenic
TAGCACCACTGCACAAAGCA+TGG 0.592070 5_4:-62737439 Msa0863000:CDS
AGTCATCGGTGCGTTAGTGA+AGG 0.630469 5_4:-62727978 Msa0863000:intron
AACATGGTATTGGAAAGTGT+TGG 0.637520 5_4:-62726921 Msa0863000:CDS
AATTCCATAATAAAGGTGCA+AGG 0.655845 5_4:+62735868 None:intergenic
ACGCAATATGGAAATCGGCA+AGG 0.671375 5_4:-62727207 Msa0863000:CDS
GATTGCTGAGTTCAAGAACA+AGG 0.671470 5_4:+62737403 None:intergenic
GAGACAAAAGAGAATAACAC+GGG 0.671617 5_4:+62726862 None:intergenic
TGAGACAAAAGAGAATAACA+CGG 0.720458 5_4:+62726861 None:intergenic
GCTTGAGTAAGATTCAACAG+CGG 0.799751 5_4:+62728651 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTATTTTGTCATTTT+TGG - chr5_4:62727074-62727093 Msa0863000:intron 10.0%
!!! TATTTTATTTTGTCATTTTT+GGG - chr5_4:62727075-62727094 Msa0863000:intron 10.0%
!! TAAAATGTTATATGATATAT+AGG - chr5_4:62727498-62727517 Msa0863000:intron 10.0%
!! TGATTAACATATATTAAAAT+GGG + chr5_4:62728156-62728175 None:intergenic 10.0%
!! ATGATTAACATATATTAAAA+TGG + chr5_4:62728157-62728176 None:intergenic 10.0%
!!! TTTTGTTTTTTGTTTTTTTA+AGG - chr5_4:62729960-62729979 Msa0863000:intron 10.0%
!!! CCTTATTTATTAATTTTATT+AGG + chr5_4:62730660-62730679 None:intergenic 10.0%
!! CCTAATAAAATTAATAAATA+AGG - chr5_4:62730657-62730676 Msa0863000:intron 10.0%
!! AATATTTGATTCAAAAAAAA+AGG - chr5_4:62730779-62730798 Msa0863000:intron 10.0%
!! ATATTTGATTCAAAAAAAAA+AGG - chr5_4:62730780-62730799 Msa0863000:intron 10.0%
!! AATATTTGATTCAAAAAAAA+AGG - chr5_4:62730779-62730798 Msa0863000:intron 10.0%
!!! TTTTGTTTTTTGTTTTTTTA+AGG - chr5_4:62729960-62729979 Msa0863000:intron 10.0%
!!! CCTTATTTATTAATTTTATT+AGG + chr5_4:62730660-62730679 None:intergenic 10.0%
!! CCTAATAAAATTAATAAATA+AGG - chr5_4:62730657-62730676 Msa0863000:intron 10.0%
!! ATATTTGATTCAAAAAAAAA+AGG - chr5_4:62730780-62730799 Msa0863000:intron 10.0%
!! ATATTTGATTCAAAAAAAAA+AGG - chr5_4:62730780-62730799 Msa0863000:intron 10.0%
!!! CTATATATATTTTTTGTTAT+GGG + chr5_4:62736356-62736375 None:intergenic 10.0%
!!! ACTATATATATTTTTTGTTA+TGG + chr5_4:62736357-62736376 None:intergenic 10.0%
!! GAAATTATTATAATTAACAA+AGG + chr5_4:62736931-62736950 None:intergenic 10.0%
!! TTCTTGAGATATATTAAAAA+TGG + chr5_4:62726928-62726947 None:intergenic 15.0%
!!! ATTTTATTTTGTCATTTTTG+GGG - chr5_4:62727076-62727095 Msa0863000:intron 15.0%
!!! TTGTGTAATTCTTTATTTTA+TGG - chr5_4:62727331-62727350 Msa0863000:intron 15.0%
!!! TGTGTAATTCTTTATTTTAT+GGG - chr5_4:62727332-62727351 Msa0863000:intron 15.0%
!! AAAAATTGAACTTGAATAAT+TGG - chr5_4:62727527-62727546 Msa0863000:intron 15.0%
!!! AATGTCTTTATATGATTTTT+TGG - chr5_4:62728003-62728022 Msa0863000:CDS 15.0%
!!! TTTGGATAACTATTATTTTT+TGG - chr5_4:62728021-62728040 Msa0863000:CDS 15.0%
!!! AGAAAATGAAAATTTTCATT+TGG - chr5_4:62728109-62728128 Msa0863000:intron 15.0%
!! ATATGTTAATCATTATCAAT+TGG - chr5_4:62728164-62728183 Msa0863000:intron 15.0%
!! TTGAAAACATAAACATAAAT+TGG + chr5_4:62728767-62728786 None:intergenic 15.0%
!!! ACAACATTATTTATTTTTGT+AGG - chr5_4:62728808-62728827 Msa0863000:intron 15.0%
!! TATAATATAAGAGATGAAAA+TGG - chr5_4:62729125-62729144 Msa0863000:intron 15.0%
!!! AAATATAGTTGTTTCTAAAA+TGG + chr5_4:62729691-62729710 None:intergenic 15.0%
!! TATTTCAATAAAAATGTTAG+TGG - chr5_4:62729706-62729725 Msa0863000:intron 15.0%
!!! TTTTTGTTTCTTTTGTTTTT+AGG - chr5_4:62729994-62730013 Msa0863000:intron 15.0%
!!! TTTTGTTTCTTTTGTTTTTA+GGG - chr5_4:62729995-62730014 Msa0863000:intron 15.0%
!! ACTATATTTATAAACAATAG+AGG + chr5_4:62730307-62730326 None:intergenic 15.0%
!!! ATTTGTTAGGTTAAAAAATA+AGG - chr5_4:62730816-62730835 Msa0863000:intron 15.0%
!! TATTTGATTAAAAAAAAAGG+AGG - chr5_4:62731148-62731167 Msa0863000:intron 15.0%
!!! ATTTGTTAGGTTAAAAAATA+AGG - chr5_4:62730816-62730835 Msa0863000:intron 15.0%
!! TATTTGCTTCATAAAAAAAA+AGG - chr5_4:62731035-62731054 Msa0863000:intron 15.0%
!!! ATTTGTTAGGTTAAAAAATA+AGG - chr5_4:62730816-62730835 Msa0863000:intron 15.0%
!! TATTTGATTAAAAAAAAAGG+AGG - chr5_4:62731148-62731167 Msa0863000:intron 15.0%
!!! ATTTGTTAGGTTAAAAAATA+AGG - chr5_4:62730816-62730835 Msa0863000:intron 15.0%
!! ATATTTGCTTCATAAAAAAA+AGG - chr5_4:62731034-62731053 Msa0863000:intron 15.0%
!! TAAATATGAAATATGATCAA+TGG - chr5_4:62732569-62732588 Msa0863000:intron 15.0%
!!! AAATATAGTTGTTTCTAAAA+TGG + chr5_4:62729691-62729710 None:intergenic 15.0%
!! TATTTCAATAAAAATGTTAG+TGG - chr5_4:62729706-62729725 Msa0863000:intron 15.0%
!!! TTTTTGTTTCTTTTGTTTTT+AGG - chr5_4:62729994-62730013 Msa0863000:intron 15.0%
!!! TTTTGTTTCTTTTGTTTTTA+GGG - chr5_4:62729995-62730014 Msa0863000:intron 15.0%
!! ACTATATTTATAAACAATAG+AGG + chr5_4:62730307-62730326 None:intergenic 15.0%
!!! ATTTGTTAGGTTAAAAAATA+AGG - chr5_4:62730816-62730835 Msa0863000:intron 15.0%
!! TATTTGATTAAAAAAAAAGG+AGG - chr5_4:62731148-62731167 Msa0863000:intron 15.0%
!!! ATTTGTTAGGTTAAAAAATA+AGG - chr5_4:62730816-62730835 Msa0863000:intron 15.0%
!! TATTTGCTTCATAAAAAAAA+AGG - chr5_4:62731035-62731054 Msa0863000:intron 15.0%
!! TAAATATGAAATAGTTGTTT+CGG - chr5_4:62734975-62734994 Msa0863000:intron 15.0%
!! TAAATATGAAATATGATCAA+TGG - chr5_4:62732569-62732588 Msa0863000:intron 15.0%
!! AGTAAATAAGATATAGTAAT+TGG - chr5_4:62735182-62735201 Msa0863000:intron 15.0%
!! TAAATATTGTGTTTAACATA+TGG - chr5_4:62735680-62735699 Msa0863000:intron 15.0%
!!! TTGATTTTCAAGTATTTTAT+GGG + chr5_4:62735720-62735739 None:intergenic 15.0%
!!! ATTGATTTTCAAGTATTTTA+TGG + chr5_4:62735721-62735740 None:intergenic 15.0%
!!! ATTTTTTTACATGAAAAAGA+AGG + chr5_4:62735777-62735796 None:intergenic 15.0%
!!! CTTGATGTTAATAATTTTTA+TGG - chr5_4:62736325-62736344 Msa0863000:intron 15.0%
!!! TTTTAAAGTTACCAATAAAT+TGG + chr5_4:62736520-62736539 None:intergenic 15.0%
!!! ATTGGTAACTTTAAAATTTA+TGG - chr5_4:62736524-62736543 Msa0863000:intron 15.0%
!! ATTATTGTTATAATGTTCTT+AGG - chr5_4:62736620-62736639 Msa0863000:intron 15.0%
!! TTATTGTTATAATGTTCTTA+GGG - chr5_4:62736621-62736640 Msa0863000:intron 15.0%
!!! ATAAAAAAAACTACTTTTAG+AGG + chr5_4:62736659-62736678 None:intergenic 15.0%
!! AAAATACATATTAGGAATTT+GGG - chr5_4:62736769-62736788 Msa0863000:intron 15.0%
!!! ATCATTTTATCTATATTATG+AGG - chr5_4:62736815-62736834 Msa0863000:intron 15.0%
!!! TCATTTTATCTATATTATGA+GGG - chr5_4:62736816-62736835 Msa0863000:intron 15.0%
!! GATTCTTTAACAAAAATAAA+TGG + chr5_4:62736857-62736876 None:intergenic 15.0%
!! TAACAAAGGAAAAATAAATA+TGG + chr5_4:62736917-62736936 None:intergenic 15.0%
!! GAATAACAAAAAAATTAAGA+AGG + chr5_4:62737156-62737175 None:intergenic 15.0%
!! TAAGAAAGAGATAATTTGAA+AGG - chr5_4:62727401-62727420 Msa0863000:intron 20.0%
!! GTTGAGAATAATATCTTATT+AGG - chr5_4:62728186-62728205 Msa0863000:intron 20.0%
!!! TTTCATTTTTTAAGTTTCAG+AGG - chr5_4:62728333-62728352 Msa0863000:intron 20.0%
!!! TACTATTGCAATATTTTTAC+AGG - chr5_4:62728403-62728422 Msa0863000:intron 20.0%
!!! TCTAAAAGTATTACAAACAA+GGG + chr5_4:62728503-62728522 None:intergenic 20.0%
!! GAAAAAAGTTATTATGCATT+TGG - chr5_4:62728594-62728613 Msa0863000:intron 20.0%
!! ATTCATAAGCTAAAAAAACA+AGG + chr5_4:62728688-62728707 None:intergenic 20.0%
!! TAATAAGTGTATAAATCTGT+GGG + chr5_4:62729240-62729259 None:intergenic 20.0%
!! TTAATAAGTGTATAAATCTG+TGG + chr5_4:62729241-62729260 None:intergenic 20.0%
!! AATTTATGCAGCATAAATAT+AGG - chr5_4:62729301-62729320 Msa0863000:intron 20.0%
!!! AATTTTAGAGTTACATTCAA+AGG - chr5_4:62729459-62729478 Msa0863000:intron 20.0%
!! AAATGGATATGTAATCTTAA+AGG + chr5_4:62729674-62729693 None:intergenic 20.0%
!!! ATGTGATAGTTTTATTTTCA+CGG - chr5_4:62730022-62730041 Msa0863000:intron 20.0%
!! AAAGAAATCAAATTATTACG+TGG + chr5_4:62730054-62730073 None:intergenic 20.0%
!! CAATAAAAAAAACGAAAAGA+TGG + chr5_4:62730139-62730158 None:intergenic 20.0%
!!! TATAAACAATAGAGGATTTT+AGG + chr5_4:62730299-62730318 None:intergenic 20.0%
!!! AGGAATTTGTTAGTTTAAAT+TGG - chr5_4:62730541-62730560 Msa0863000:intron 20.0%
!!! AATTTTAGAGGGAAATTATT+AGG - chr5_4:62730619-62730638 Msa0863000:intron 20.0%
!!! CAAATATTTTCTACACTTTT+AGG + chr5_4:62730767-62730786 None:intergenic 20.0%
!! ATTTGATTCAAAAAAAAAGG+AGG - chr5_4:62730782-62730801 Msa0863000:intron 20.0%
!! TAGGTTAAAAAATAAGGATT+CGG - chr5_4:62730822-62730841 Msa0863000:intron 20.0%
!!! TATCAAGTTTGCTATAATTT+TGG + chr5_4:62730852-62730871 None:intergenic 20.0%
!! GCAAACTTGATAAAAAAATT+CGG - chr5_4:62730860-62730879 Msa0863000:intron 20.0%
!! TTTGCTTCATAAAAAAAAAG+AGG - chr5_4:62731037-62731056 Msa0863000:intron 20.0%
!!! CAAATATTTTCTACACTTTT+AGG + chr5_4:62730767-62730786 None:intergenic 20.0%
!! TAGGTTAAAAAATAAGGATT+CGG - chr5_4:62730822-62730841 Msa0863000:intron 20.0%
!!! TATCAAGTTTGCTATAATTT+TGG + chr5_4:62730852-62730871 None:intergenic 20.0%
!!! CAAATATTTTCTACACTTTT+AGG + chr5_4:62730767-62730786 None:intergenic 20.0%
!! TTTGATTCAAAAAAAAAAGG+AGG - chr5_4:62731514-62731533 Msa0863000:intron 20.0%
!! TAGGTTAAAAAATAAGGATT+CGG - chr5_4:62730822-62730841 Msa0863000:intron 20.0%
!!! TATCAAGTTTGCTATAATTT+TGG + chr5_4:62730852-62730871 None:intergenic 20.0%
!! GCAAACTTGATAAAAAAATT+CGG - chr5_4:62730860-62730879 Msa0863000:intron 20.0%
!! ATTTGCTTCATAAAAAAAAG+AGG - chr5_4:62731768-62731787 Msa0863000:intron 20.0%
!!! CAAATATTTTCTACACTTTT+AGG + chr5_4:62730767-62730786 None:intergenic 20.0%
!! TAGGTTAAAAAATAAGGATT+CGG - chr5_4:62730822-62730841 Msa0863000:intron 20.0%
!!! TATCAAGTTTGCTATAATTT+TGG + chr5_4:62730852-62730871 None:intergenic 20.0%
!!! CAAATATTTTCTACACTTTT+AGG + chr5_4:62730767-62730786 None:intergenic 20.0%
!! ATTTGATTCAAAAAAAAAGG+AGG - chr5_4:62730782-62730801 Msa0863000:intron 20.0%
!!! GTTTGTTAGGTTAAAAAATA+AGG - chr5_4:62732277-62732296 Msa0863000:intron 20.0%
!! TAGGTTAAAAAATAAGGATT+CGG - chr5_4:62730822-62730841 Msa0863000:intron 20.0%
!!! TATCAAGTTTGCTATAATTT+TGG + chr5_4:62730852-62730871 None:intergenic 20.0%
!! TAGATATGAAATAGTTGTTT+CGG - chr5_4:62732493-62732512 Msa0863000:intron 20.0%
!! GAAATATGAAATAGTTGTTT+CGG - chr5_4:62732533-62732552 Msa0863000:intron 20.0%
!!! AAATATGAAATAGTTGTTTC+GGG - chr5_4:62732534-62732553 Msa0863000:intron 20.0%
!! AAATGGATATGTAATCTTAA+AGG + chr5_4:62729674-62729693 None:intergenic 20.0%
!!! ATGTGATAGTTTTATTTTCA+CGG - chr5_4:62730022-62730041 Msa0863000:intron 20.0%
!! AAAGAAATCAAATTATTACG+TGG + chr5_4:62730054-62730073 None:intergenic 20.0%
!! CAATAAAAAAAACGAAAAGA+TGG + chr5_4:62730139-62730158 None:intergenic 20.0%
!! GTAACAAACAAAATTGTTTA+AGG - chr5_4:62733426-62733445 Msa0863000:intron 20.0%
!!! TATAAACAATAGAGGATTTT+AGG + chr5_4:62730299-62730318 None:intergenic 20.0%
!!! AGGAATTTGTTAGTTTAAAT+TGG - chr5_4:62730541-62730560 Msa0863000:intron 20.0%
!!! AATTTTAGAGGGAAATTATT+AGG - chr5_4:62730619-62730638 Msa0863000:intron 20.0%
!!! CAAATATTTTCTACACTTTT+AGG + chr5_4:62730767-62730786 None:intergenic 20.0%
!! TTTGATTCAAAAAAAAAAGG+AGG - chr5_4:62731514-62731533 Msa0863000:intron 20.0%
!! TAGGTTAAAAAATAAGGATT+CGG - chr5_4:62730822-62730841 Msa0863000:intron 20.0%
!!! TATCAAGTTTGCTATAATTT+TGG + chr5_4:62730852-62730871 None:intergenic 20.0%
!! GCAAACTTGATAAAAAAATT+CGG - chr5_4:62730860-62730879 Msa0863000:intron 20.0%
!! TTTGCTTCATAAAAAAAAAG+AGG - chr5_4:62731037-62731056 Msa0863000:intron 20.0%
!!! CAAATATTTTCTACACTTTT+AGG + chr5_4:62730767-62730786 None:intergenic 20.0%
!! TAGGTTAAAAAATAAGGATT+CGG - chr5_4:62730822-62730841 Msa0863000:intron 20.0%
!!! TATCAAGTTTGCTATAATTT+TGG + chr5_4:62730852-62730871 None:intergenic 20.0%
!!! CAAATATTTTCTACACTTTT+AGG + chr5_4:62730767-62730786 None:intergenic 20.0%
!! TTTGATTCAAAAAAAAAAGG+AGG - chr5_4:62731514-62731533 Msa0863000:intron 20.0%
!!! GTTTGTTAGGTTAAAAAATA+AGG - chr5_4:62732277-62732296 Msa0863000:intron 20.0%
!! TAGGTTAAAAAATAAGGATT+CGG - chr5_4:62730822-62730841 Msa0863000:intron 20.0%
!!! TATCAAGTTTGCTATAATTT+TGG + chr5_4:62730852-62730871 None:intergenic 20.0%
!! TAGATATGAAATAGTTGTTT+CGG - chr5_4:62732493-62732512 Msa0863000:intron 20.0%
!! GAAATATGAAATAGTTGTTT+CGG - chr5_4:62732533-62732552 Msa0863000:intron 20.0%
!!! AAATATGAAATAGTTGTTTC+GGG - chr5_4:62732534-62732553 Msa0863000:intron 20.0%
!!! TTTTTTTAAAATTGTCCAAG+AGG - chr5_4:62735347-62735366 Msa0863000:intron 20.0%
!! AGGAATGGATAAAAATATAA+AGG + chr5_4:62736189-62736208 None:intergenic 20.0%
!! TTGTAATGTGAAACTATATT+TGG - chr5_4:62736427-62736446 Msa0863000:intron 20.0%
!! TGATACAAAAACCAATTTAT+TGG - chr5_4:62736506-62736525 Msa0863000:intron 20.0%
!! ACTGAATGTAAAACTTAAAT+AGG + chr5_4:62736743-62736762 None:intergenic 20.0%
!!! ATTCCTAATATGTATTTTCA+AGG + chr5_4:62736767-62736786 None:intergenic 20.0%
!! GAAAATACATATTAGGAATT+TGG - chr5_4:62736768-62736787 Msa0863000:intron 20.0%
!! TTGTTTATATGAATTTGACT+TGG - chr5_4:62737121-62737140 Msa0863000:intron 20.0%
!! AAATTCTTTCATATTAACAC+AGG - chr5_4:62737486-62737505 Msa0863000:CDS 20.0%
!! AATTCTTTCATATTAACACA+GGG - chr5_4:62737487-62737506 Msa0863000:CDS 20.0%
!! AATTTTGTCGTATATTGAGT+AGG + chr5_4:62726713-62726732 None:intergenic 25.0%
! ATGGACAAAAAAAAGTAGAT+TGG + chr5_4:62726909-62726928 None:intergenic 25.0%
! ATTTGAATCAATGTTGACAA+AGG + chr5_4:62727011-62727030 None:intergenic 25.0%
! TGTTACAAAATTGCATTAGT+TGG - chr5_4:62727277-62727296 Msa0863000:intron 25.0%
! GTAAGAATGTGATAGTTAAT+AGG - chr5_4:62727441-62727460 Msa0863000:intron 25.0%
! TTAATAGGATGAGATGAAAT+AGG - chr5_4:62727456-62727475 Msa0863000:intron 25.0%
! ATATGACTAGAATCTCATTA+TGG + chr5_4:62728051-62728070 None:intergenic 25.0%
! GAGAATAATATCTTATTAGG+TGG - chr5_4:62728189-62728208 Msa0863000:intron 25.0%
! TAATATCTTATTAGGTGGTA+TGG - chr5_4:62728194-62728213 Msa0863000:intron 25.0%
! CCATAAGAATTCCATAATAA+AGG + chr5_4:62728383-62728402 None:intergenic 25.0%
! CCTTTATTATGGAATTCTTA+TGG - chr5_4:62728380-62728399 Msa0863000:CDS 25.0%
!!! CTCTAAAAGTATTACAAACA+AGG + chr5_4:62728504-62728523 None:intergenic 25.0%
!! AGATTGATCATTTGTTACTA+AGG - chr5_4:62728522-62728541 Msa0863000:intron 25.0%
! TGAAAATGGAACAAGAAAAA+TGG - chr5_4:62729139-62729158 Msa0863000:intron 25.0%
! GAAAATGGAACAAGAAAAAT+GGG - chr5_4:62729140-62729159 Msa0863000:intron 25.0%
! AGGAATATAAGAAAACGTTT+AGG - chr5_4:62729321-62729340 Msa0863000:intron 25.0%
!!! AGTTTTGACTTGGTAATTTA+CGG + chr5_4:62729358-62729377 None:intergenic 25.0%
!!! AGTTCAATTAAGTTTTGACT+TGG + chr5_4:62729368-62729387 None:intergenic 25.0%
! ACAATAAAAATGAGTGTTAG+TGG - chr5_4:62729636-62729655 Msa0863000:intron 25.0%
! TAGGGTTAATTAAGATTGAT+TGG - chr5_4:62729807-62729826 Msa0863000:intron 25.0%
!!! ACGAATCTTTTTCATTGTAA+AGG + chr5_4:62729904-62729923 None:intergenic 25.0%
! TACAATGAAAAAGATTCGTT+AGG - chr5_4:62729905-62729924 Msa0863000:intron 25.0%
!!! TGTGATAGTTTTATTTTCAC+GGG - chr5_4:62730023-62730042 Msa0863000:intron 25.0%
! GTAACAAACAAAATTGTTCA+AGG - chr5_4:62730249-62730268 Msa0863000:intron 25.0%
!!! CATTTTAGATGGAATTTGTT+AGG - chr5_4:62730571-62730590 Msa0863000:intron 25.0%
!! AATCTAATGCAGAATTTTAG+AGG - chr5_4:62730607-62730626 Msa0863000:intron 25.0%
!! ATCTAATGCAGAATTTTAGA+GGG - chr5_4:62730608-62730627 Msa0863000:intron 25.0%
! GGATAAAAAATGCATGAAAT+TGG - chr5_4:62730678-62730697 Msa0863000:intron 25.0%
! TAAAAAATGCATGAAATTGG+TGG - chr5_4:62730681-62730700 Msa0863000:intron 25.0%
! AAAAAATGCATGAAATTGGT+GGG - chr5_4:62730682-62730701 Msa0863000:intron 25.0%
! ATTCAAAAAAAAAGGAGGAT+AGG - chr5_4:62730787-62730806 Msa0863000:intron 25.0%
! GATTAAAAAAAAAGGAGGAT+AGG - chr5_4:62731153-62731172 Msa0863000:intron 25.0%
!! GCAAACTTGATAACAAAATT+CGG - chr5_4:62731226-62731245 Msa0863000:intron 25.0%
! AAAATGTGGGGAAAATATTA+GGG - chr5_4:62731332-62731351 Msa0863000:intron 25.0%
! TTCATAAAAAAAAAGGCAAG+AGG - chr5_4:62731408-62731427 Msa0863000:intron 25.0%
! TTCAAAAAAAAAAGGAGGAT+AGG - chr5_4:62731519-62731538 Msa0863000:intron 25.0%
! GATTAAAAAAAAAGGAGGAT+AGG - chr5_4:62731153-62731172 Msa0863000:intron 25.0%
!! GCAAACTTGATAACAAAATT+CGG - chr5_4:62731226-62731245 Msa0863000:intron 25.0%
! AAAATGTGGGGAAAATATTA+GGG - chr5_4:62731332-62731351 Msa0863000:intron 25.0%
!! TTAAAAAATAAGGATTCGGT+TGG - chr5_4:62732287-62732306 Msa0863000:intron 25.0%
!! GCAAACTTGATAACAAAATT+CGG - chr5_4:62731226-62731245 Msa0863000:intron 25.0%
!! AATAGTTGTTTCGGAAAAAT+AGG - chr5_4:62732502-62732521 Msa0863000:intron 25.0%
!! ATAGTTGTTTCGGAAAAATA+GGG - chr5_4:62732503-62732522 Msa0863000:intron 25.0%
! ACAATAAAAATGAGTGTTAG+TGG - chr5_4:62729636-62729655 Msa0863000:intron 25.0%
! TAGGGTTAATTAAGATTGAT+TGG - chr5_4:62729807-62729826 Msa0863000:intron 25.0%
!!! ACGAATCTTTTTCATTGTAA+AGG + chr5_4:62729904-62729923 None:intergenic 25.0%
! TACAATGAAAAAGATTCGTT+AGG - chr5_4:62729905-62729924 Msa0863000:intron 25.0%
!!! TGTGATAGTTTTATTTTCAC+GGG - chr5_4:62730023-62730042 Msa0863000:intron 25.0%
!!! CATTTTAGATGGAATTTGTT+AGG - chr5_4:62730571-62730590 Msa0863000:intron 25.0%
!! AATCTAATGCAGAATTTTAG+AGG - chr5_4:62730607-62730626 Msa0863000:intron 25.0%
!! ATCTAATGCAGAATTTTAGA+GGG - chr5_4:62730608-62730627 Msa0863000:intron 25.0%
! GGATAAAAAATGCATGAAAT+TGG - chr5_4:62730678-62730697 Msa0863000:intron 25.0%
! TAAAAAATGCATGAAATTGG+TGG - chr5_4:62730681-62730700 Msa0863000:intron 25.0%
! AAAAAATGCATGAAATTGGT+GGG - chr5_4:62730682-62730701 Msa0863000:intron 25.0%
! TTCAAAAAAAAAAGGAGGAT+AGG - chr5_4:62731519-62731538 Msa0863000:intron 25.0%
! GATTAAAAAAAAAGGAGGAT+AGG - chr5_4:62731153-62731172 Msa0863000:intron 25.0%
!! GCAAACTTGATAACAAAATT+CGG - chr5_4:62731226-62731245 Msa0863000:intron 25.0%
! AAAATGTGGGGAAAATATTA+GGG - chr5_4:62731332-62731351 Msa0863000:intron 25.0%
! TTCATAAAAAAAAAGGCAAG+AGG - chr5_4:62731408-62731427 Msa0863000:intron 25.0%
!! TTAAAAAATAAGGATTCGGT+TGG - chr5_4:62732287-62732306 Msa0863000:intron 25.0%
!! GCAAACTTGATAACAAAATT+CGG - chr5_4:62731226-62731245 Msa0863000:intron 25.0%
!! AATAGTTGTTTCGGAAAAAT+AGG - chr5_4:62732502-62732521 Msa0863000:intron 25.0%
!! ATAGTTGTTTCGGAAAAATA+GGG - chr5_4:62732503-62732522 Msa0863000:intron 25.0%
! GTTTGAATTGTGAAAATTGT+TGG + chr5_4:62735262-62735281 None:intergenic 25.0%
! CAAACGAAACATGATTATAA+AGG - chr5_4:62735281-62735300 Msa0863000:intron 25.0%
! ACATGATTATAAAGGAAAGT+TGG - chr5_4:62735289-62735308 Msa0863000:intron 25.0%
! AAGGAAAGTTGGAAATTAAA+TGG - chr5_4:62735300-62735319 Msa0863000:intron 25.0%
! GTTTAATATTGTAACCTCAA+TGG - chr5_4:62735389-62735408 Msa0863000:intron 25.0%
!!! CAAGAAGAAAAAGTATTGAT+AGG + chr5_4:62735465-62735484 None:intergenic 25.0%
!! GATATATTGAAGTTATTTCC+TGG + chr5_4:62735562-62735581 None:intergenic 25.0%
!! AAAAGAAGGTATACTATTTG+TGG + chr5_4:62735763-62735782 None:intergenic 25.0%
!!! AGAAATTCCATTTTTGTATC+AGG + chr5_4:62735861-62735880 None:intergenic 25.0%
! ACAAAAATGGAATTTCTCAA+TGG - chr5_4:62735864-62735883 Msa0863000:CDS 25.0%
! AAGTCTTAAATGCTCAAATT+GGG + chr5_4:62736232-62736251 None:intergenic 25.0%
! GTTCCTTGAAAATACATATT+AGG - chr5_4:62736761-62736780 Msa0863000:intron 25.0%
! AAGAAAATCTATGCTTTCTT+TGG + chr5_4:62736985-62737004 None:intergenic 25.0%
! AAGACTCTGTAAAAAGAAAT+TGG + chr5_4:62737101-62737120 None:intergenic 25.0%
! CAACTTTGATTAGATGATAT+TGG + chr5_4:62737189-62737208 None:intergenic 25.0%
!! GATGGTTTGATTTATATTTG+TGG - chr5_4:62737260-62737279 Msa0863000:intron 25.0%
TATTGAGTAGGTGATATTAC+AGG + chr5_4:62726701-62726720 None:intergenic 30.0%
AAGTAGATTGGTAAAAACCT+TGG + chr5_4:62726897-62726916 None:intergenic 30.0%
TCTCAAGAAATCCAAATCTT+TGG - chr5_4:62726939-62726958 Msa0863000:CDS 30.0%
GTTCATTGTTTAGTGTATCA+TGG - chr5_4:62727137-62727156 Msa0863000:intron 30.0%
!!! TTTTTAAGTTTCAGAGGAAC+AGG - chr5_4:62728339-62728358 Msa0863000:intron 30.0%
! AATTCCATAATAAAGGTGCA+AGG + chr5_4:62728376-62728395 None:intergenic 30.0%
AAAGAACAACAACTAGTTGA+TGG + chr5_4:62728456-62728475 None:intergenic 30.0%
! TGCATGTGTCTTAATTTTAG+TGG - chr5_4:62728568-62728587 Msa0863000:intron 30.0%
AACTTATCGATAATTGACTG+AGG - chr5_4:62728925-62728944 Msa0863000:intron 30.0%
!! GCTAATAACTTGCAACTTTT+CGG + chr5_4:62729270-62729289 None:intergenic 30.0%
AGTGTTAGTGGCTTAAAAAA+AGG - chr5_4:62729648-62729667 Msa0863000:intron 30.0%
TAAAAATGTTAGTGGTCTAG+TGG - chr5_4:62729714-62729733 Msa0863000:intron 30.0%
!!! TGTTTCTTTTGTTTTTAGGG+AGG - chr5_4:62729998-62730017 Msa0863000:intron 30.0%
ATTTACATTATGTCAACGTG+TGG - chr5_4:62730093-62730112 Msa0863000:intron 30.0%
! GGATAGGAATGAAATTTGTT+AGG - chr5_4:62730803-62730822 Msa0863000:intron 30.0%
TTAAAAAATAAGGATTCGGC+TGG - chr5_4:62730826-62730845 Msa0863000:intron 30.0%
ACTTGATAAAAAAATTCGGC+TGG - chr5_4:62730864-62730883 Msa0863000:intron 30.0%
GCATTAAGTAAGATGATCAA+TGG - chr5_4:62730886-62730905 Msa0863000:intron 30.0%
GATCAATGGCTAAAATTGAA+TGG - chr5_4:62730900-62730919 Msa0863000:intron 30.0%
AAAAAAGTGGAGGGAAAAAT+GGG - chr5_4:62730951-62730970 Msa0863000:intron 30.0%
AAAAATGGGGGGAAAATATT+AGG - chr5_4:62730965-62730984 Msa0863000:intron 30.0%
AAAATGGGGGGAAAATATTA+GGG - chr5_4:62730966-62730985 Msa0863000:intron 30.0%
! GGTTAAGCTTTAGTAAGTTA+GGG - chr5_4:62731005-62731024 Msa0863000:intron 30.0%
CATAAAAAAAAAGAGGCAAG+AGG - chr5_4:62731044-62731063 Msa0863000:intron 30.0%
CAAGAGGATAGGAATAAAAT+TGG - chr5_4:62731060-62731079 Msa0863000:intron 30.0%
! GGATAGGAATGAAATTTGTT+AGG - chr5_4:62730803-62730822 Msa0863000:intron 30.0%
TTAAAAAATAAGGATTCGGC+TGG - chr5_4:62730826-62730845 Msa0863000:intron 30.0%
GCATTAAGTAAGATGATCAA+TGG - chr5_4:62730886-62730905 Msa0863000:intron 30.0%
GATCAATGGCTAAAATTGAA+TGG - chr5_4:62730900-62730919 Msa0863000:intron 30.0%
GAAAATGTGGGGAAAATATT+AGG - chr5_4:62731331-62731350 Msa0863000:intron 30.0%
! GGTTAAGCTTTAGTAAGTTA+GGG - chr5_4:62731005-62731024 Msa0863000:intron 30.0%
AAAAAAAAAGGCAAGAGGAT+AGG - chr5_4:62731413-62731432 Msa0863000:intron 30.0%
CAAGAGGATAGGAATAAAAT+TGG - chr5_4:62731060-62731079 Msa0863000:intron 30.0%
! GGATAGGAATGAAATTTGTT+AGG - chr5_4:62730803-62730822 Msa0863000:intron 30.0%
TTAAAAAATAAGGATTCGGC+TGG - chr5_4:62730826-62730845 Msa0863000:intron 30.0%
ACTTGATAAAAAAATTCGGC+TGG - chr5_4:62730864-62730883 Msa0863000:intron 30.0%
GCATTAAGTAAGATGATCAA+TGG - chr5_4:62730886-62730905 Msa0863000:intron 30.0%
GATCAATGGCTAAAATTGAA+TGG - chr5_4:62730900-62730919 Msa0863000:intron 30.0%
AAAAATGGGGGGAAAATATT+AGG - chr5_4:62730965-62730984 Msa0863000:intron 30.0%
AAAATGGGGGGAAAATATTA+GGG - chr5_4:62730966-62730985 Msa0863000:intron 30.0%
! GGTTAAGCTTTAGTAAGTTA+GGG - chr5_4:62731005-62731024 Msa0863000:intron 30.0%
TCATAAAAAAAAGAGGCAAG+AGG - chr5_4:62731775-62731794 Msa0863000:intron 30.0%
CAAGAGGATAGGAATAAAAT+TGG - chr5_4:62731060-62731079 Msa0863000:intron 30.0%
! GGATAGGAATGAAATTTGTT+AGG - chr5_4:62730803-62730822 Msa0863000:intron 30.0%
TTAAAAAATAAGGATTCGGC+TGG - chr5_4:62730826-62730845 Msa0863000:intron 30.0%
GCATTAAGTAAGATGATCAA+TGG - chr5_4:62730886-62730905 Msa0863000:intron 30.0%
GATCAATGGCTAAAATTGAA+TGG - chr5_4:62730900-62730919 Msa0863000:intron 30.0%
GAAAATGTGGGGAAAATATT+AGG - chr5_4:62731331-62731350 Msa0863000:intron 30.0%
! GGTTAAGCTTTAGTAAGTTA+GGG - chr5_4:62731005-62731024 Msa0863000:intron 30.0%
CTTCATAAAAAAAAGGCAAG+AGG - chr5_4:62732138-62732157 Msa0863000:intron 30.0%
TAAAAAAAAGGCAAGAGGAT+AGG - chr5_4:62732143-62732162 Msa0863000:intron 30.0%
!!! ATGCGATGCATTTTTTTAGA+TGG - chr5_4:62732176-62732195 Msa0863000:intron 30.0%
! GGATATGAATGAAGTTTGTT+AGG - chr5_4:62732264-62732283 Msa0863000:intron 30.0%
GCATTAAGTAAGATGATCAA+TGG - chr5_4:62730886-62730905 Msa0863000:intron 30.0%
GATCAATGGCTAAAATTGAA+TGG - chr5_4:62730900-62730919 Msa0863000:intron 30.0%
AAAAATGGGGGGAAAATATT+AGG - chr5_4:62730965-62730984 Msa0863000:intron 30.0%
AAAATGGGGGGAAAATATTA+GGG - chr5_4:62730966-62730985 Msa0863000:intron 30.0%
GATCAATGGCTAAAATTGAA+TGG - chr5_4:62730900-62730919 Msa0863000:intron 30.0%
AAAAATGGGGGGAAAATATT+AGG - chr5_4:62730965-62730984 Msa0863000:intron 30.0%
AAAATGGGGGGAAAATATTA+GGG - chr5_4:62730966-62730985 Msa0863000:intron 30.0%
AGTGTTAGTGGCTTAAAAAA+AGG - chr5_4:62729648-62729667 Msa0863000:intron 30.0%
TAAAAATGTTAGTGGTCTAG+TGG - chr5_4:62729714-62729733 Msa0863000:intron 30.0%
!!! TGTTTCTTTTGTTTTTAGGG+AGG - chr5_4:62729998-62730017 Msa0863000:intron 30.0%
ATTTACATTATGTCAACGTG+TGG - chr5_4:62730093-62730112 Msa0863000:intron 30.0%
! GGATAGGAATGAAATTTGTT+AGG - chr5_4:62730803-62730822 Msa0863000:intron 30.0%
TTAAAAAATAAGGATTCGGC+TGG - chr5_4:62730826-62730845 Msa0863000:intron 30.0%
ACTTGATAAAAAAATTCGGC+TGG - chr5_4:62730864-62730883 Msa0863000:intron 30.0%
GCATTAAGTAAGATGATCAA+TGG - chr5_4:62730886-62730905 Msa0863000:intron 30.0%
GATCAATGGCTAAAATTGAA+TGG - chr5_4:62730900-62730919 Msa0863000:intron 30.0%
AAAAAAGTGGAGGGAAAAAT+GGG - chr5_4:62730951-62730970 Msa0863000:intron 30.0%
AAAAATGGGGGGAAAATATT+AGG - chr5_4:62730965-62730984 Msa0863000:intron 30.0%
AAAATGGGGGGAAAATATTA+GGG - chr5_4:62730966-62730985 Msa0863000:intron 30.0%
! GGTTAAGCTTTAGTAAGTTA+GGG - chr5_4:62731005-62731024 Msa0863000:intron 30.0%
CATAAAAAAAAAGAGGCAAG+AGG - chr5_4:62731044-62731063 Msa0863000:intron 30.0%
CAAGAGGATAGGAATAAAAT+TGG - chr5_4:62731060-62731079 Msa0863000:intron 30.0%
! GGATAGGAATGAAATTTGTT+AGG - chr5_4:62730803-62730822 Msa0863000:intron 30.0%
TTAAAAAATAAGGATTCGGC+TGG - chr5_4:62730826-62730845 Msa0863000:intron 30.0%
GCATTAAGTAAGATGATCAA+TGG - chr5_4:62730886-62730905 Msa0863000:intron 30.0%
GATCAATGGCTAAAATTGAA+TGG - chr5_4:62730900-62730919 Msa0863000:intron 30.0%
GAAAATGTGGGGAAAATATT+AGG - chr5_4:62731331-62731350 Msa0863000:intron 30.0%
! GGTTAAGCTTTAGTAAGTTA+GGG - chr5_4:62731005-62731024 Msa0863000:intron 30.0%
AAAAAAAAAGGCAAGAGGAT+AGG - chr5_4:62731413-62731432 Msa0863000:intron 30.0%
CAAGAGGATAGGAATAAAAT+TGG - chr5_4:62731060-62731079 Msa0863000:intron 30.0%
! GGATATGAATGAAGTTTGTT+AGG - chr5_4:62732264-62732283 Msa0863000:intron 30.0%
GCATTAAGTAAGATGATCAA+TGG - chr5_4:62730886-62730905 Msa0863000:intron 30.0%
GATCAATGGCTAAAATTGAA+TGG - chr5_4:62730900-62730919 Msa0863000:intron 30.0%
AAAAATGGGGGGAAAATATT+AGG - chr5_4:62730965-62730984 Msa0863000:intron 30.0%
AAAATGGGGGGAAAATATTA+GGG - chr5_4:62730966-62730985 Msa0863000:intron 30.0%
GATCAATGGCTAAAATTGAA+TGG - chr5_4:62730900-62730919 Msa0863000:intron 30.0%
AAAAATGGGGGGAAAATATT+AGG - chr5_4:62730965-62730984 Msa0863000:intron 30.0%
AAAATGGGGGGAAAATATTA+GGG - chr5_4:62730966-62730985 Msa0863000:intron 30.0%
! CAGATAGTGATAATTTTTCC+AGG - chr5_4:62735541-62735560 Msa0863000:intron 30.0%
ATCTCATCCTGATACAAAAA+TGG - chr5_4:62735851-62735870 Msa0863000:CDS 30.0%
! TTTTTATTGTGAGTGTGCTA+TGG - chr5_4:62735960-62735979 Msa0863000:intron 30.0%
GTAATACTAATGTGAAAGAG+TGG - chr5_4:62736027-62736046 Msa0863000:intron 30.0%
AGCTGCAAATAATTAAGAAG+CGG + chr5_4:62736160-62736179 None:intergenic 30.0%
CAAGTCTTAAATGCTCAAAT+TGG + chr5_4:62736233-62736252 None:intergenic 30.0%
AAAATTCTGTCAGATGATGA+TGG - chr5_4:62737242-62737261 Msa0863000:intron 30.0%
!!! AGTAGTTCAAGTTTTGAACA+TGG - chr5_4:62737304-62737323 Msa0863000:intron 30.0%
!!! TCAAGTTTTGAACATGGTAT+TGG - chr5_4:62737310-62737329 Msa0863000:intron 30.0%
TGAGACAAAAGAGAATAACA+CGG + chr5_4:62737383-62737402 None:intergenic 30.0%
! TTGACAGTTTTCAACATGTT+TGG + chr5_4:62737539-62737558 None:intergenic 30.0%
TCACAACATCTCCAAAGATT+TGG + chr5_4:62726953-62726972 None:intergenic 35.0%
AATCAATGTTGACAAAGGAG+CGG + chr5_4:62727006-62727025 None:intergenic 35.0%
TGAGTCTGTGAAGCATAAAA+AGG - chr5_4:62727376-62727395 Msa0863000:intron 35.0%
ATCTATCACGAAAGTCAGAT+TGG + chr5_4:62727574-62727593 None:intergenic 35.0%
CGCTTTACATGTTCTCTTAA+AGG - chr5_4:62727783-62727802 Msa0863000:intron 35.0%
TGTGACTAAGTCTACTGAAA+GGG + chr5_4:62727968-62727987 None:intergenic 35.0%
ATGTGACTAAGTCTACTGAA+AGG + chr5_4:62727969-62727988 None:intergenic 35.0%
ACTACATCGGATAATCTATC+CGG + chr5_4:62728989-62729008 None:intergenic 35.0%
GATAGATTATCCGATGTAGT+AGG - chr5_4:62728989-62729008 Msa0863000:intron 35.0%
! GGTCTTATGAACGACTTATT+TGG - chr5_4:62729078-62729097 Msa0863000:intron 35.0%
AGAGAGAAGGAATAACATCT+AGG + chr5_4:62729191-62729210 None:intergenic 35.0%
!! GCAAGTTATTAGCATTGACT+TGG - chr5_4:62729277-62729296 Msa0863000:intron 35.0%
GGTAATTTACGGTTACTTGA+TGG + chr5_4:62729347-62729366 None:intergenic 35.0%
TGCATCAACAGAAATGAACA+TGG - chr5_4:62729561-62729580 Msa0863000:intron 35.0%
!! AAAGCTCTAAGGTGTTGTTA+TGG - chr5_4:62729739-62729758 Msa0863000:intron 35.0%
!! AAGCTCTAAGGTGTTGTTAT+GGG - chr5_4:62729740-62729759 Msa0863000:intron 35.0%
GAATAAAAAGCTTATCAGCG+AGG - chr5_4:62730489-62730508 Msa0863000:intron 35.0%
TATCAGCGAGGAGAAATATT+AGG - chr5_4:62730501-62730520 Msa0863000:intron 35.0%
ATCAGCGAGGAGAAATATTA+GGG - chr5_4:62730502-62730521 Msa0863000:intron 35.0%
!!! GTGCGATGCATTTTTTTAGA+TGG - chr5_4:62730715-62730734 Msa0863000:intron 35.0%
TCTAAATGTGCAAGATCCAA+TGG - chr5_4:62730925-62730944 Msa0863000:intron 35.0%
CAAAAAAGTGGAGGGAAAAA+TGG - chr5_4:62730950-62730969 Msa0863000:intron 35.0%
AAAAAGTGGAGGGAAAAATG+GGG - chr5_4:62730952-62730971 Msa0863000:intron 35.0%
! GGGTTAAGCTTTAGTAAGTT+AGG - chr5_4:62731004-62731023 Msa0863000:intron 35.0%
AAAAAAAGAGGCAAGAGGAT+AGG - chr5_4:62731049-62731068 Msa0863000:intron 35.0%
!!! GTGCGATGCATTATTTTAGA+TGG - chr5_4:62731082-62731101 Msa0863000:intron 35.0%
! ACTTGATAACAAAATTCGGC+TGG - chr5_4:62731230-62731249 Msa0863000:intron 35.0%
! GGGTTAAGCTTTAGTAAGTT+AGG - chr5_4:62731004-62731023 Msa0863000:intron 35.0%
!!! GTGCGATGCATTTTTTTAGA+TGG - chr5_4:62730715-62730734 Msa0863000:intron 35.0%
TCTAAATGTGCAAGATCCAA+TGG - chr5_4:62730925-62730944 Msa0863000:intron 35.0%
! GGGTTAAGCTTTAGTAAGTT+AGG - chr5_4:62731004-62731023 Msa0863000:intron 35.0%
AAAAAAAGAGGCAAGAGGAT+AGG - chr5_4:62731049-62731068 Msa0863000:intron 35.0%
!!! GTGCGATGCATTATTTTAGA+TGG - chr5_4:62731082-62731101 Msa0863000:intron 35.0%
! ACTTGATAACAAAATTCGGC+TGG - chr5_4:62731230-62731249 Msa0863000:intron 35.0%
! GGGTTAAGCTTTAGTAAGTT+AGG - chr5_4:62731004-62731023 Msa0863000:intron 35.0%
! ACTTGATAACAAAATTCGGC+TGG - chr5_4:62731230-62731249 Msa0863000:intron 35.0%
AGAAAAGTGGAGGGAAAAAT+GGG - chr5_4:62732412-62732431 Msa0863000:intron 35.0%
CCATTGGATCTTGTACATTT+AGG + chr5_4:62732611-62732630 None:intergenic 35.0%
CCTAAATGTACAAGATCCAA+TGG - chr5_4:62732608-62732627 Msa0863000:intron 35.0%
AGAAAAGTGGAGGGAAAAAT+GGG - chr5_4:62732412-62732431 Msa0863000:intron 35.0%
TGCATCAACAGAAATGAACA+TGG - chr5_4:62729561-62729580 Msa0863000:intron 35.0%
!! AAAGCTCTAAGGTGTTGTTA+TGG - chr5_4:62729739-62729758 Msa0863000:intron 35.0%
!! AAGCTCTAAGGTGTTGTTAT+GGG - chr5_4:62729740-62729759 Msa0863000:intron 35.0%
GAATAAAAAGCTTATCAGCG+AGG - chr5_4:62730489-62730508 Msa0863000:intron 35.0%
TATCAGCGAGGAGAAATATT+AGG - chr5_4:62730501-62730520 Msa0863000:intron 35.0%
ATCAGCGAGGAGAAATATTA+GGG - chr5_4:62730502-62730521 Msa0863000:intron 35.0%
!!! GTGCGATGCATTTTTTTAGA+TGG - chr5_4:62730715-62730734 Msa0863000:intron 35.0%
TCTAAATGTGCAAGATCCAA+TGG - chr5_4:62730925-62730944 Msa0863000:intron 35.0%
CAAAAAAGTGGAGGGAAAAA+TGG - chr5_4:62730950-62730969 Msa0863000:intron 35.0%
AAAAAGTGGAGGGAAAAATG+GGG - chr5_4:62730952-62730971 Msa0863000:intron 35.0%
! GGGTTAAGCTTTAGTAAGTT+AGG - chr5_4:62731004-62731023 Msa0863000:intron 35.0%
AAAAAAAGAGGCAAGAGGAT+AGG - chr5_4:62731049-62731068 Msa0863000:intron 35.0%
!!! GTGCGATGCATTATTTTAGA+TGG - chr5_4:62731082-62731101 Msa0863000:intron 35.0%
! ACTTGATAACAAAATTCGGC+TGG - chr5_4:62731230-62731249 Msa0863000:intron 35.0%
! GGGTTAAGCTTTAGTAAGTT+AGG - chr5_4:62731004-62731023 Msa0863000:intron 35.0%
!!! GTGCGATGCATTTTTTTAGA+TGG - chr5_4:62730715-62730734 Msa0863000:intron 35.0%
! ACTTGATAACAAAATTCGGC+TGG - chr5_4:62731230-62731249 Msa0863000:intron 35.0%
AGAAAAGTGGAGGGAAAAAT+GGG - chr5_4:62732412-62732431 Msa0863000:intron 35.0%
CCATTGGATCTTGTACATTT+AGG + chr5_4:62732611-62732630 None:intergenic 35.0%
CCTAAATGTACAAGATCCAA+TGG - chr5_4:62732608-62732627 Msa0863000:intron 35.0%
AGAAAAGTGGAGGGAAAAAT+GGG - chr5_4:62732412-62732431 Msa0863000:intron 35.0%
GATTTGAACTTAGTCCATTG+AGG + chr5_4:62735406-62735425 None:intergenic 35.0%
TAAGTTCAAATCTCCTCAAG+CGG - chr5_4:62735414-62735433 Msa0863000:intron 35.0%
AGCGGTTGTAAAATGACAAT+AGG - chr5_4:62735432-62735451 Msa0863000:intron 35.0%
! CATGTTTTCTTTACAGTGTG+TGG - chr5_4:62735827-62735846 Msa0863000:intron 35.0%
ATACTAATGTGAAAGAGTGG+TGG - chr5_4:62736030-62736049 Msa0863000:intron 35.0%
!! TGGTGGATTTGAATTCTCTA+CGG - chr5_4:62736047-62736066 Msa0863000:intron 35.0%
GGTTAGATGTAGTCAATTGT+AGG - chr5_4:62736072-62736091 Msa0863000:intron 35.0%
!! CATTTAAGACTTGCTAGTCT+TGG - chr5_4:62736240-62736259 Msa0863000:intron 35.0%
ATAATGTTCTTAGGGTCACT+TGG - chr5_4:62736629-62736648 Msa0863000:intron 35.0%
! AACATGGTATTGGAAAGTGT+TGG - chr5_4:62737320-62737339 Msa0863000:intron 35.0%
AGTTTCATCAATCGATGTGA+AGG + chr5_4:62737353-62737372 None:intergenic 35.0%
GAGACAAAAGAGAATAACAC+GGG + chr5_4:62737382-62737401 None:intergenic 35.0%
! CTCTTTTGTCTCAACATCAT+AGG - chr5_4:62737390-62737409 Msa0863000:CDS 35.0%
TTTGTCTCAACATCATAGGT+TGG - chr5_4:62737394-62737413 Msa0863000:CDS 35.0%
GATTGCTGAGTTCAAGAACA+AGG + chr5_4:62726841-62726860 None:intergenic 40.0%
AACTCAGCAATCCTGATCTA+AGG - chr5_4:62726849-62726868 Msa0863000:intron 40.0%
ACTCAGCAATCCTGATCTAA+GGG - chr5_4:62726850-62726869 Msa0863000:intron 40.0%
!! AGAGCATTTTCCCTTAGATC+AGG + chr5_4:62726863-62726882 None:intergenic 40.0%
! TGTGATCTTTTCAACAGTCG+AGG - chr5_4:62727640-62727659 Msa0863000:intron 40.0%
GGATTACATGTGTGTGTTCA+GGG + chr5_4:62727856-62727875 None:intergenic 40.0%
TGGATTACATGTGTGTGTTC+AGG + chr5_4:62727857-62727876 None:intergenic 40.0%
TAGAAAATTCCTCGAGGAGT+TGG + chr5_4:62727877-62727896 None:intergenic 40.0%
TAGTGCTAGAAAATTCCTCG+AGG + chr5_4:62727883-62727902 None:intergenic 40.0%
GTGACTAAGTCTACTGAAAG+GGG + chr5_4:62727967-62727986 None:intergenic 40.0%
! CATAATAAAGGTGCAAGGTC+TGG + chr5_4:62728371-62728390 None:intergenic 40.0%
CAGACCTTGCACCTTTATTA+TGG - chr5_4:62728369-62728388 Msa0863000:intron 40.0%
!! TTAAGAGTATTTCACCACCC+CGG - chr5_4:62728967-62728986 Msa0863000:intron 40.0%
TACATCGGATAATCTATCCG+GGG + chr5_4:62728987-62729006 None:intergenic 40.0%
CTACATCGGATAATCTATCC+GGG + chr5_4:62728988-62729007 None:intergenic 40.0%
AGCTATGAGACCTACTACAT+CGG + chr5_4:62729002-62729021 None:intergenic 40.0%
TCTCATAGCTAATACCCTTC+AGG - chr5_4:62729012-62729031 Msa0863000:intron 40.0%
CGACTTATTTGGATTGCTCA+AGG - chr5_4:62729089-62729108 Msa0863000:intron 40.0%
TCCTTCTCTCTTCTATCCTT+CGG - chr5_4:62729200-62729219 Msa0863000:intron 40.0%
TACAAAACCCGTACATCGTA+CGG + chr5_4:62729402-62729421 None:intergenic 40.0%
GTCTAGTGGTAAAAGCTCTA+AGG - chr5_4:62729728-62729747 Msa0863000:intron 40.0%
!! AAGGTGTTGTTATGGGTAGT+TGG - chr5_4:62729747-62729766 Msa0863000:intron 40.0%
TATGTCAACGTGTGGAAAGA+CGG - chr5_4:62730101-62730120 Msa0863000:intron 40.0%
TACACAAACGATGACACAAC+AGG - chr5_4:62730462-62730481 Msa0863000:intron 40.0%
! AGGGATTGCTGCATTTTAGA+AGG - chr5_4:62730521-62730540 Msa0863000:intron 40.0%
! GAAATTGGTGGGCATGAAAT+TGG - chr5_4:62730693-62730712 Msa0863000:intron 40.0%
GATCCAATGGCTCAAAAAAG+TGG - chr5_4:62730938-62730957 Msa0863000:intron 40.0%
CAATGGCTCAAAAAAGTGGA+GGG - chr5_4:62730942-62730961 Msa0863000:intron 40.0%
AAAAGTGGAGGGAAAAATGG+GGG - chr5_4:62730953-62730972 Msa0863000:intron 40.0%
ATTAGGGCAACAATAGCTTG+AGG - chr5_4:62730982-62731001 Msa0863000:intron 40.0%
TTAGGGCAACAATAGCTTGA+GGG - chr5_4:62730983-62731002 Msa0863000:intron 40.0%
CCATTGGATCTTGCACATTT+AGG + chr5_4:62730928-62730947 None:intergenic 40.0%
CCTAAATGTGCAAGATCCAA+TGG - chr5_4:62731291-62731310 Msa0863000:intron 40.0%
ATTAGGGCAACAATAGCTTG+AGG - chr5_4:62730982-62731001 Msa0863000:intron 40.0%
TTAGGGCAACAATAGCTTGA+GGG - chr5_4:62730983-62731002 Msa0863000:intron 40.0%
ATTAGGGCAACAATAGCTTG+AGG - chr5_4:62730982-62731001 Msa0863000:intron 40.0%
TTAGGGCAACAATAGCTTGA+GGG - chr5_4:62730983-62731002 Msa0863000:intron 40.0%
CCATTGGATCTTGCACATTT+AGG + chr5_4:62730928-62730947 None:intergenic 40.0%
CCTAAATGTGCAAGATCCAA+TGG - chr5_4:62731291-62731310 Msa0863000:intron 40.0%
ATTAGGGCAACAATAGCTTG+AGG - chr5_4:62730982-62731001 Msa0863000:intron 40.0%
TTAGGGCAACAATAGCTTGA+GGG - chr5_4:62730983-62731002 Msa0863000:intron 40.0%
CCATTGGATCTTGCACATTT+AGG + chr5_4:62730928-62730947 None:intergenic 40.0%
CCTAAATGTGCAAGATCCAA+TGG - chr5_4:62731291-62731310 Msa0863000:intron 40.0%
CAGAAAAGTGGAGGGAAAAA+TGG - chr5_4:62732411-62732430 Msa0863000:intron 40.0%
GAAAAGTGGAGGGAAAAATG+GGG - chr5_4:62732413-62732432 Msa0863000:intron 40.0%
AAAAGTGGAGGGAAAAATGG+GGG - chr5_4:62730953-62730972 Msa0863000:intron 40.0%
TTAGGGCAACAATAGCTTGA+AGG - chr5_4:62730983-62731002 Msa0863000:intron 40.0%
TAGGGCAACAATAGCTTGAA+GGG - chr5_4:62732445-62732464 Msa0863000:intron 40.0%
CAGAAAAGTGGAGGGAAAAA+TGG - chr5_4:62732411-62732430 Msa0863000:intron 40.0%
GAAAAGTGGAGGGAAAAATG+GGG - chr5_4:62732413-62732432 Msa0863000:intron 40.0%
AAAAGTGGAGGGAAAAATGG+GGG - chr5_4:62730953-62730972 Msa0863000:intron 40.0%
GTCTAGTGGTAAAAGCTCTA+AGG - chr5_4:62729728-62729747 Msa0863000:intron 40.0%
!! AAGGTGTTGTTATGGGTAGT+TGG - chr5_4:62729747-62729766 Msa0863000:intron 40.0%
TATGTCAACGTGTGGAAAGA+CGG - chr5_4:62730101-62730120 Msa0863000:intron 40.0%
TACACAAACGATGACACAAC+AGG - chr5_4:62730462-62730481 Msa0863000:intron 40.0%
! AGGGATTGCTGCATTTTAGA+AGG - chr5_4:62730521-62730540 Msa0863000:intron 40.0%
! GAAATTGGTGGGCATGAAAT+TGG - chr5_4:62730693-62730712 Msa0863000:intron 40.0%
GATCCAATGGCTCAAAAAAG+TGG - chr5_4:62730938-62730957 Msa0863000:intron 40.0%
CAATGGCTCAAAAAAGTGGA+GGG - chr5_4:62730942-62730961 Msa0863000:intron 40.0%
AAAAGTGGAGGGAAAAATGG+GGG - chr5_4:62730953-62730972 Msa0863000:intron 40.0%
ATTAGGGCAACAATAGCTTG+AGG - chr5_4:62730982-62731001 Msa0863000:intron 40.0%
TTAGGGCAACAATAGCTTGA+GGG - chr5_4:62730983-62731002 Msa0863000:intron 40.0%
CCATTGGATCTTGCACATTT+AGG + chr5_4:62730928-62730947 None:intergenic 40.0%
CCTAAATGTGCAAGATCCAA+TGG - chr5_4:62731291-62731310 Msa0863000:intron 40.0%
ATTAGGGCAACAATAGCTTG+AGG - chr5_4:62730982-62731001 Msa0863000:intron 40.0%
TTAGGGCAACAATAGCTTGA+GGG - chr5_4:62730983-62731002 Msa0863000:intron 40.0%
CCATTGGATCTTGCACATTT+AGG + chr5_4:62730928-62730947 None:intergenic 40.0%
CCTAAATGTGCAAGATCCAA+TGG - chr5_4:62731291-62731310 Msa0863000:intron 40.0%
CAGAAAAGTGGAGGGAAAAA+TGG - chr5_4:62732411-62732430 Msa0863000:intron 40.0%
GAAAAGTGGAGGGAAAAATG+GGG - chr5_4:62732413-62732432 Msa0863000:intron 40.0%
AAAAGTGGAGGGAAAAATGG+GGG - chr5_4:62730953-62730972 Msa0863000:intron 40.0%
TTAGGGCAACAATAGCTTGA+AGG - chr5_4:62730983-62731002 Msa0863000:intron 40.0%
TAGGGCAACAATAGCTTGAA+GGG - chr5_4:62732445-62732464 Msa0863000:intron 40.0%
CAGAAAAGTGGAGGGAAAAA+TGG - chr5_4:62732411-62732430 Msa0863000:intron 40.0%
GAAAAGTGGAGGGAAAAATG+GGG - chr5_4:62732413-62732432 Msa0863000:intron 40.0%
AAAAGTGGAGGGAAAAATGG+GGG - chr5_4:62730953-62730972 Msa0863000:intron 40.0%
GGGGGAAAATATTAGGGTTA+GGG - chr5_4:62735137-62735156 Msa0863000:intron 40.0%
!!! TGTCATTTTACAACCGCTTG+AGG + chr5_4:62735430-62735449 None:intergenic 40.0%
GCTTGAGTAAGATTCAACAG+CGG + chr5_4:62735593-62735612 None:intergenic 40.0%
CTTCTACCTCTTAATCGTTC+TGG - chr5_4:62735900-62735919 Msa0863000:intron 40.0%
CACTATCCAGAACGATTAAG+AGG + chr5_4:62735909-62735928 None:intergenic 40.0%
TATTGTGAGTGTGCTATGGA+CGG - chr5_4:62735964-62735983 Msa0863000:intron 40.0%
TGCAATCTTATTCGTGCTCT+TGG - chr5_4:62736701-62736720 Msa0863000:intron 40.0%
TGCCTACGCAATATGGAAAT+CGG - chr5_4:62737029-62737048 Msa0863000:intron 40.0%
ATCAAAGTTGTCATCTCTGC+AGG - chr5_4:62737199-62737218 Msa0863000:intron 40.0%
GGGCTTGCAATGCATTAAAA+AGG - chr5_4:62737507-62737526 Msa0863000:CDS 40.0%
GCGTCGTTTGTAAGTGCTTT+AGG - chr5_4:62726764-62726783 Msa0863000:intron 45.0%
! TTGTGCAGTGGTGCTAGATT+GGG + chr5_4:62726798-62726817 None:intergenic 45.0%
! TTTGTGCAGTGGTGCTAGAT+TGG + chr5_4:62726799-62726818 None:intergenic 45.0%
! TTCAAGAACAAGGCGTTCCA+TGG + chr5_4:62726831-62726850 None:intergenic 45.0%
ACATGTAATCCAACTCCTCG+AGG - chr5_4:62727865-62727884 Msa0863000:intron 45.0%
GGTGACTGTTGTATCCTGAA+GGG + chr5_4:62729029-62729048 None:intergenic 45.0%
AGGTGACTGTTGTATCCTGA+AGG + chr5_4:62729030-62729049 None:intergenic 45.0%
AGACCTTGCTAATTCACGTG+TGG + chr5_4:62729063-62729082 None:intergenic 45.0%
ACCGAAGGATAGAAGAGAGA+AGG + chr5_4:62729204-62729223 None:intergenic 45.0%
CTCTTAACCCGTACGATGTA+CGG - chr5_4:62729391-62729410 Msa0863000:intron 45.0%
TCTTAACCCGTACGATGTAC+GGG - chr5_4:62729392-62729411 Msa0863000:intron 45.0%
ACAAAACCCGTACATCGTAC+GGG + chr5_4:62729401-62729420 None:intergenic 45.0%
ATGTCAACGTGTGGAAAGAC+GGG - chr5_4:62730102-62730121 Msa0863000:intron 45.0%
! TTGGTGCGCTGCATTTTAGA+TGG - chr5_4:62730560-62730579 Msa0863000:intron 45.0%
!!! CCTCCACTTTTTTGAGCCAT+TGG + chr5_4:62730944-62730963 None:intergenic 45.0%
CCAATGGCTCAAAAAAGTGG+AGG - chr5_4:62730941-62730960 Msa0863000:intron 45.0%
AAAGTGGAGGGAAAAATGGG+GGG - chr5_4:62730954-62730973 Msa0863000:intron 45.0%
TAGGGCAACAATAGCTTGAG+GGG - chr5_4:62730984-62731003 Msa0863000:intron 45.0%
CAAAGTGGAGGGGAAAATGT+GGG - chr5_4:62731319-62731338 Msa0863000:intron 45.0%
AAAGTGGAGGGGAAAATGTG+GGG - chr5_4:62731320-62731339 Msa0863000:intron 45.0%
TAGGGCAACAATAGCTTGAG+GGG - chr5_4:62730984-62731003 Msa0863000:intron 45.0%
AAAGTGGAGGGAAAAATGGG+GGG - chr5_4:62730954-62730973 Msa0863000:intron 45.0%
TAGGGCAACAATAGCTTGAG+GGG - chr5_4:62730984-62731003 Msa0863000:intron 45.0%
CAAAGTGGAGGGGAAAATGT+GGG - chr5_4:62731319-62731338 Msa0863000:intron 45.0%
AAAGTGGAGGGGAAAATGTG+GGG - chr5_4:62731320-62731339 Msa0863000:intron 45.0%
TAGGGCAACAATAGCTTGAG+GGG - chr5_4:62730984-62731003 Msa0863000:intron 45.0%
GATCCAATGGCTCAGAAAAG+TGG - chr5_4:62732399-62732418 Msa0863000:intron 45.0%
CAATGGCTCAGAAAAGTGGA+GGG - chr5_4:62732403-62732422 Msa0863000:intron 45.0%
AAAGTGGAGGGAAAAATGGG+GGG - chr5_4:62730954-62730973 Msa0863000:intron 45.0%
GATCCAATGGCTCAGAAAAG+TGG - chr5_4:62732399-62732418 Msa0863000:intron 45.0%
CAATGGCTCAGAAAAGTGGA+GGG - chr5_4:62732403-62732422 Msa0863000:intron 45.0%
AAAGTGGAGGGAAAAATGGG+GGG - chr5_4:62730954-62730973 Msa0863000:intron 45.0%
ATGTCAACGTGTGGAAAGAC+GGG - chr5_4:62730102-62730121 Msa0863000:intron 45.0%
! TTGGTGCGCTGCATTTTAGA+TGG - chr5_4:62730560-62730579 Msa0863000:intron 45.0%
!!! CCTCCACTTTTTTGAGCCAT+TGG + chr5_4:62730944-62730963 None:intergenic 45.0%
CCAATGGCTCAAAAAAGTGG+AGG - chr5_4:62730941-62730960 Msa0863000:intron 45.0%
AAAGTGGAGGGAAAAATGGG+GGG - chr5_4:62730954-62730973 Msa0863000:intron 45.0%
TAGGGCAACAATAGCTTGAG+GGG - chr5_4:62730984-62731003 Msa0863000:intron 45.0%
CAAAGTGGAGGGGAAAATGT+GGG - chr5_4:62731319-62731338 Msa0863000:intron 45.0%
AAAGTGGAGGGGAAAATGTG+GGG - chr5_4:62731320-62731339 Msa0863000:intron 45.0%
TAGGGCAACAATAGCTTGAG+GGG - chr5_4:62730984-62731003 Msa0863000:intron 45.0%
GATCCAATGGCTCAGAAAAG+TGG - chr5_4:62732399-62732418 Msa0863000:intron 45.0%
CAATGGCTCAGAAAAGTGGA+GGG - chr5_4:62732403-62732422 Msa0863000:intron 45.0%
AAAGTGGAGGGAAAAATGGG+GGG - chr5_4:62730954-62730973 Msa0863000:intron 45.0%
GATCCAATGGCTCAGAAAAG+TGG - chr5_4:62732399-62732418 Msa0863000:intron 45.0%
CAATGGCTCAGAAAAGTGGA+GGG - chr5_4:62732403-62732422 Msa0863000:intron 45.0%
AAAGTGGAGGGAAAAATGGG+GGG - chr5_4:62730954-62730973 Msa0863000:intron 45.0%
GGGGGGAAAATATTAGGGTT+AGG - chr5_4:62735136-62735155 Msa0863000:intron 45.0%
!! TTAGGGTTAGGGTTAGCTTC+AGG - chr5_4:62735148-62735167 Msa0863000:intron 45.0%
!! TAGGGTTAGGGTTAGCTTCA+GGG - chr5_4:62735149-62735168 Msa0863000:intron 45.0%
AGATTCAACAGCGGTAGAGT+AGG + chr5_4:62735584-62735603 None:intergenic 45.0%
AACTCGTGTGTGCAATGTTC+TGG - chr5_4:62735619-62735638 Msa0863000:intron 45.0%
CAATGTTCTGGCACTACTTC+AGG - chr5_4:62735631-62735650 Msa0863000:intron 45.0%
GGATTTGAATTCTCTACGGC+TGG - chr5_4:62736051-62736070 Msa0863000:intron 45.0%
! TCGCTTGTCGTTTGAAGGAA+TGG + chr5_4:62736204-62736223 None:intergenic 45.0%
! CTAACTCGCTTGTCGTTTGA+AGG + chr5_4:62736209-62736228 None:intergenic 45.0%
!! CTTGCTAGTCTTGGAGTCAT+CGG - chr5_4:62736249-62736268 Msa0863000:intron 45.0%
CTGTCGTACATGATAGTCAC+AGG - chr5_4:62736953-62736972 Msa0863000:intron 45.0%
TCCACTATGCCTACGCAATA+TGG - chr5_4:62737022-62737041 Msa0863000:intron 45.0%
TCCATATTGCGTAGGCATAG+TGG + chr5_4:62737026-62737045 None:intergenic 45.0%
!! TGCCGATTTCCATATTGCGT+AGG + chr5_4:62737034-62737053 None:intergenic 45.0%
ACGCAATATGGAAATCGGCA+AGG - chr5_4:62737034-62737053 Msa0863000:intron 45.0%
!!! AATTATTTATTTAGTTTAAA+AGG + chr5_4:62727178-62727197 None:intergenic 5.0%
!! AAATATTTGATTAAAAAAAA+AGG - chr5_4:62731145-62731164 Msa0863000:intron 5.0%
!! AAATATTTGATTAAAAAAAA+AGG - chr5_4:62731145-62731164 Msa0863000:intron 5.0%
!! AAATATTTGATTAAAAAAAA+AGG - chr5_4:62731145-62731164 Msa0863000:intron 5.0%
!! AAAACATAAAATTAATTTAT+AGG + chr5_4:62736879-62736898 None:intergenic 5.0%
TAGCACCACTGCACAAAGCA+TGG - chr5_4:62726802-62726821 Msa0863000:intron 50.0%
TGCACAAAGCATGGCATCCA+TGG - chr5_4:62726811-62726830 Msa0863000:intron 50.0%
TGCTCTTCGTGTTCTCTCCA+AGG - chr5_4:62726877-62726896 Msa0863000:CDS 50.0%
ATCGGATAATCTATCCGGGG+TGG + chr5_4:62728984-62729003 None:intergenic 50.0%
GCACCACACGTGAATTAGCA+AGG - chr5_4:62729057-62729076 Msa0863000:intron 50.0%
GGTTTAGTGCACACTACCGA+AGG + chr5_4:62729219-62729238 None:intergenic 50.0%
CTTGCTAGACCCGCCAAAAA+GGG - chr5_4:62729778-62729797 Msa0863000:intron 50.0%
! AACCCTAATCCCGCCCTTTT+TGG + chr5_4:62729794-62729813 None:intergenic 50.0%
GATCCAATGGCTCAGCAAAG+TGG - chr5_4:62731304-62731323 Msa0863000:intron 50.0%
CAATGGCTCAGCAAAGTGGA+GGG - chr5_4:62731308-62731327 Msa0863000:intron 50.0%
AATGGCTCAGCAAAGTGGAG+GGG - chr5_4:62731309-62731328 Msa0863000:intron 50.0%
GCAAAGTGGAGGGGAAAATG+TGG - chr5_4:62731318-62731337 Msa0863000:intron 50.0%
GATCCAATGGCTCAGCAAAG+TGG - chr5_4:62731304-62731323 Msa0863000:intron 50.0%
CAATGGCTCAGCAAAGTGGA+GGG - chr5_4:62731308-62731327 Msa0863000:intron 50.0%
AATGGCTCAGCAAAGTGGAG+GGG - chr5_4:62731309-62731328 Msa0863000:intron 50.0%
GCAAAGTGGAGGGGAAAATG+TGG - chr5_4:62731318-62731337 Msa0863000:intron 50.0%
!! CCTCCACTTTTCTGAGCCAT+TGG + chr5_4:62732405-62732424 None:intergenic 50.0%
CCAATGGCTCAGAAAAGTGG+AGG - chr5_4:62732402-62732421 Msa0863000:intron 50.0%
!! CCTCCACTTTTCTGAGCCAT+TGG + chr5_4:62732405-62732424 None:intergenic 50.0%
CCAATGGCTCAGAAAAGTGG+AGG - chr5_4:62732402-62732421 Msa0863000:intron 50.0%
CTTGCTAGACCCGCCAAAAA+GGG - chr5_4:62729778-62729797 Msa0863000:intron 50.0%
! AACCCTAATCCCGCCCTTTT+TGG + chr5_4:62729794-62729813 None:intergenic 50.0%
GATCCAATGGCTCAGCAAAG+TGG - chr5_4:62731304-62731323 Msa0863000:intron 50.0%
CAATGGCTCAGCAAAGTGGA+GGG - chr5_4:62731308-62731327 Msa0863000:intron 50.0%
AATGGCTCAGCAAAGTGGAG+GGG - chr5_4:62731309-62731328 Msa0863000:intron 50.0%
GCAAAGTGGAGGGGAAAATG+TGG - chr5_4:62731318-62731337 Msa0863000:intron 50.0%
!! CCTCCACTTTTCTGAGCCAT+TGG + chr5_4:62732405-62732424 None:intergenic 50.0%
CCAATGGCTCAGAAAAGTGG+AGG - chr5_4:62732402-62732421 Msa0863000:intron 50.0%
!! CCTCCACTTTTCTGAGCCAT+TGG + chr5_4:62732405-62732424 None:intergenic 50.0%
CCAATGGCTCAGAAAAGTGG+AGG - chr5_4:62732402-62732421 Msa0863000:intron 50.0%
!! AGGGTTAGGGTTAGCTTCAG+GGG - chr5_4:62735150-62735169 Msa0863000:intron 50.0%
AGTCATCGGTGCGTTAGTGA+AGG - chr5_4:62736263-62736282 Msa0863000:intron 50.0%
GGATGCCATGCTTTGTGCAG+TGG + chr5_4:62726810-62726829 None:intergenic 55.0%
! TGAGGCGTGCACAAAGCACT+GGG - chr5_4:62728943-62728962 Msa0863000:intron 55.0%
! TCACGTGTGGTGCTAGCAAG+AGG + chr5_4:62729050-62729069 None:intergenic 55.0%
!! CCTTTTTGGCGGGTCTAGCA+AGG + chr5_4:62729780-62729799 None:intergenic 55.0%
CCTTGCTAGACCCGCCAAAA+AGG - chr5_4:62729777-62729796 Msa0863000:intron 55.0%
!! CTAATCCCGCCCTTTTTGGC+GGG + chr5_4:62729790-62729809 None:intergenic 55.0%
! CCTAATCCCGCCCTTTTTGG+CGG + chr5_4:62729791-62729810 None:intergenic 55.0%
CGCCAAAAAGGGCGGGATTA+GGG - chr5_4:62729789-62729808 Msa0863000:intron 55.0%
CCTCCACTTTGCTGAGCCAT+TGG + chr5_4:62731310-62731329 None:intergenic 55.0%
CCAATGGCTCAGCAAAGTGG+AGG - chr5_4:62731307-62731326 Msa0863000:intron 55.0%
CCTCCACTTTGCTGAGCCAT+TGG + chr5_4:62731310-62731329 None:intergenic 55.0%
CCAATGGCTCAGCAAAGTGG+AGG - chr5_4:62731307-62731326 Msa0863000:intron 55.0%
!! CCTTTTTGGCGGGTCTAGCA+AGG + chr5_4:62729780-62729799 None:intergenic 55.0%
CCTTGCTAGACCCGCCAAAA+AGG - chr5_4:62729777-62729796 Msa0863000:intron 55.0%
!! CTAATCCCGCCCTTTTTGGC+GGG + chr5_4:62729790-62729809 None:intergenic 55.0%
! CCTAATCCCGCCCTTTTTGG+CGG + chr5_4:62729791-62729810 None:intergenic 55.0%
CGCCAAAAAGGGCGGGATTA+GGG - chr5_4:62729789-62729808 Msa0863000:intron 55.0%
CCTCCACTTTGCTGAGCCAT+TGG + chr5_4:62731310-62731329 None:intergenic 55.0%
CCAATGGCTCAGCAAAGTGG+AGG - chr5_4:62731307-62731326 Msa0863000:intron 55.0%
CTGAGGCGTGCACAAAGCAC+TGG - chr5_4:62728942-62728961 Msa0863000:intron 60.0%
GCTAGACCCGCCAAAAAGGG+CGG - chr5_4:62729781-62729800 Msa0863000:intron 60.0%
CTAGACCCGCCAAAAAGGGC+GGG - chr5_4:62729782-62729801 Msa0863000:intron 60.0%
CCGCCAAAAAGGGCGGGATT+AGG - chr5_4:62729788-62729807 Msa0863000:intron 60.0%
GCTAGACCCGCCAAAAAGGG+CGG - chr5_4:62729781-62729800 Msa0863000:intron 60.0%
CTAGACCCGCCAAAAAGGGC+GGG - chr5_4:62729782-62729801 Msa0863000:intron 60.0%
CCGCCAAAAAGGGCGGGATT+AGG - chr5_4:62729788-62729807 Msa0863000:intron 60.0%
!! TCCAAGAGGCGCTAGCTCAG+TGG - chr5_4:62735361-62735380 Msa0863000:intron 60.0%
ACCACTGAGCTAGCGCCTCT+TGG + chr5_4:62735365-62735384 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 62726686 62737577 62726686 ID=Msa0863000;Name=Msa0863000
chr5_4 mRNA 62726686 62737577 62726686 ID=Msa0863000-mRNA-1;Parent=Msa0863000;Name=Msa0863000-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0|0|1|1|0.87|8|0|296
chr5_4 exon 62737365 62737577 62737365 ID=Msa0863000-mRNA-1:exon:19657;Parent=Msa0863000-mRNA-1
chr5_4 exon 62735839 62735910 62735839 ID=Msa0863000-mRNA-1:exon:19656;Parent=Msa0863000-mRNA-1
chr5_4 exon 62728611 62728700 62728611 ID=Msa0863000-mRNA-1:exon:19655;Parent=Msa0863000-mRNA-1
chr5_4 exon 62728378 62728420 62728378 ID=Msa0863000-mRNA-1:exon:19654;Parent=Msa0863000-mRNA-1
chr5_4 exon 62727979 62728085 62727979 ID=Msa0863000-mRNA-1:exon:19653;Parent=Msa0863000-mRNA-1
chr5_4 exon 62727193 62727294 62727193 ID=Msa0863000-mRNA-1:exon:19652;Parent=Msa0863000-mRNA-1
chr5_4 exon 62726852 62727042 62726852 ID=Msa0863000-mRNA-1:exon:19651;Parent=Msa0863000-mRNA-1
chr5_4 exon 62726686 62726755 62726686 ID=Msa0863000-mRNA-1:exon:19650;Parent=Msa0863000-mRNA-1
chr5_4 CDS 62737365 62737577 62737365 ID=Msa0863000-mRNA-1:cds;Parent=Msa0863000-mRNA-1
chr5_4 CDS 62735839 62735910 62735839 ID=Msa0863000-mRNA-1:cds;Parent=Msa0863000-mRNA-1
chr5_4 CDS 62728611 62728700 62728611 ID=Msa0863000-mRNA-1:cds;Parent=Msa0863000-mRNA-1
chr5_4 CDS 62728378 62728420 62728378 ID=Msa0863000-mRNA-1:cds;Parent=Msa0863000-mRNA-1
chr5_4 CDS 62727979 62728085 62727979 ID=Msa0863000-mRNA-1:cds;Parent=Msa0863000-mRNA-1
chr5_4 CDS 62727193 62727294 62727193 ID=Msa0863000-mRNA-1:cds;Parent=Msa0863000-mRNA-1
chr5_4 CDS 62726852 62727042 62726852 ID=Msa0863000-mRNA-1:cds;Parent=Msa0863000-mRNA-1
chr5_4 CDS 62726686 62726755 62726686 ID=Msa0863000-mRNA-1:cds;Parent=Msa0863000-mRNA-1
Gene Sequence

>Msa0863000

CTGAATGCTTATCCTGTAATATCACCTACTCAATATACGACAAAATTTTCTTCTCAGTTGATCTCAATGAAGAACGTTGCGTCGTTTGTAAGTGCTTTAGGTGCTTCTTCCCAATCTAGCACCACTGCACAAAGCATGGCATCCATGGAACGCCTTGTTCTTGAACTCAGCAATCCTGATCTAAGGGAAAATGCTCTTCGTGTTCTCTCCAAGAGGAACAGGTTATTTCCAGACCTTGCACCTTTATTATGGAATTCTTATGGTACTATTGCAATATTTTTACAGGAAATAACTTCAATATATCCTACTCTACCGCTGTTGAATCTTACTCAAGCACAATCAACTCGTGTGTGCAATGTTCTGGCACTACTTCAGTGTGTGGCATCTCATCCTGATACAAAAATGGAATTTCTCAATGCTAACATGCCTTTATATTTTTATCCATTCCTTCAAACGACAAGCGAGTTAGCCCAATTTGAGCATTTAAGACTTGCTAGTCTTGGAGTCATCGGTGCGTTAGTGAAGTCACAGGTTAACACCAAAGAAAGCATAGATTTTCTTCTTAGAAGTGAGATAATTCCACTATGCCTACGCAATATGGAAATCGGCAAGGAATTATCAAAAACTGTTGCAACATTTATAATTCAAAAAATTCTGTCAGATGATGATGGTTTGATTTATATTTGTGGAACAGCAGAACGTTTTTTTGCAGTAGTTCAAGTTTTGAACATGGTATTGGAAAGTGTTGGCAATCAACCTTCACATCGATTGATGAAACTTCTGATCCCGTGTTATTCTCTTTTGTCTCAACATCATAGGGCTTGCAATGCATTAAAAAGGCGACTTCCAAACATGTTGAAAACTGTCAATTTCATCAATTGCCTTCGT

Protein sequence

>Msa0863000

LNAYPVISPTQYTTKFSSQLISMKNVASFVSALGASSQSSTTAQSMASMERLVLELSNPDLRENALRVLSKRNRLFPDLAPLLWNSYGTIAIFLQEITSIYPTLPLLNLTQAQSTRVCNVLALLQCVASHPDTKMEFLNANMPLYFYPFLQTTSELAQFEHLRLASLGVIGALVKSQVNTKESIDFLLRSEIIPLCLRNMEIGKELSKTVATFIIQKILSDDDGLIYICGTAERFFAVVQVLNMVLESVGNQPSHRLMKLLIPCYSLLSQHHRACNALKRRLPNMLKTVNFINCLR