Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864670 | RHN58098.1 | 79.528 | 127 | 25 | 1 | 254 | 379 | 17 | 143 | 6.87e-68 | 221 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864670 | sp|F4JL28|EBS_ARATH | 46.243 | 173 | 83 | 5 | 205 | 377 | 33 | 195 | 1.66e-44 | 156 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864670 | A0A396I035 | 79.528 | 127 | 25 | 1 | 254 | 379 | 17 | 143 | 3.28e-68 | 221 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0864670 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864670 | MtrunA17_Chr5g0447451 | 79.528 | 127 | 25 | 1 | 254 | 379 | 17 | 143 | 6.32e-72 | 221 |
| Msa0864670 | MtrunA17_Chr5g0446171 | 64.467 | 197 | 53 | 4 | 1 | 188 | 19 | 207 | 3.81e-65 | 207 |
| Msa0864670 | MtrunA17_Chr5g0446231 | 60.190 | 211 | 54 | 5 | 4 | 203 | 1 | 192 | 5.22e-65 | 216 |
| Msa0864670 | MtrunA17_Chr5g0446191 | 60.680 | 206 | 51 | 5 | 8 | 202 | 20 | 206 | 1.02e-61 | 207 |
| Msa0864670 | MtrunA17_Chr5g0413371 | 52.736 | 201 | 67 | 4 | 1 | 201 | 3 | 175 | 3.73e-49 | 175 |
| Msa0864670 | MtrunA17_Chr2g0316511 | 46.243 | 173 | 83 | 5 | 205 | 377 | 25 | 187 | 2.00e-42 | 147 |
| Msa0864670 | MtrunA17_Chr3g0145031 | 42.286 | 175 | 92 | 4 | 205 | 379 | 27 | 192 | 8.44e-42 | 146 |
| Msa0864670 | MtrunA17_Chr3g0145041 | 38.286 | 175 | 93 | 6 | 206 | 379 | 10 | 170 | 1.63e-31 | 118 |
| Msa0864670 | MtrunA17_Chr5g0445881 | 37.736 | 212 | 70 | 5 | 1 | 157 | 24 | 228 | 5.42e-25 | 105 |
| Msa0864670 | MtrunA17_Chr5g0445861 | 44.118 | 170 | 63 | 5 | 1 | 140 | 29 | 196 | 5.42e-25 | 105 |
| Msa0864670 | MtrunA17_Chr5g0445861 | 59.016 | 61 | 22 | 1 | 98 | 155 | 240 | 300 | 1.81e-11 | 65.1 |
| Msa0864670 | MtrunA17_Chr5g0445771 | 38.916 | 203 | 77 | 4 | 1 | 164 | 21 | 215 | 1.45e-21 | 96.3 |
| Msa0864670 | MtrunA17_Chr5g0445831 | 38.122 | 181 | 81 | 3 | 1 | 157 | 20 | 193 | 9.19e-21 | 93.2 |
| Msa0864670 | MtrunA17_Chr2g0324381 | 39.706 | 136 | 71 | 5 | 244 | 377 | 69 | 195 | 1.38e-20 | 89.0 |
| Msa0864670 | MtrunA17_Chr5g0445961 | 38.415 | 164 | 84 | 3 | 1 | 150 | 37 | 197 | 6.34e-16 | 79.3 |
| Msa0864670 | MtrunA17_Chr5g0446181 | 39.655 | 174 | 78 | 4 | 1 | 157 | 24 | 187 | 3.53e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864670 | AT4G22140.2 | 46.243 | 173 | 83 | 5 | 205 | 377 | 33 | 195 | 7.28e-46 | 157 |
| Msa0864670 | AT4G22140.1 | 46.243 | 173 | 83 | 5 | 205 | 377 | 33 | 195 | 1.68e-45 | 156 |
| Msa0864670 | AT4G22140.3 | 46.243 | 173 | 83 | 5 | 205 | 377 | 33 | 195 | 1.68e-45 | 156 |
| Msa0864670 | AT4G39100.1 | 39.665 | 179 | 85 | 4 | 206 | 377 | 26 | 188 | 3.77e-35 | 129 |
| Msa0864670 | AT4G04260.2 | 37.714 | 175 | 94 | 6 | 205 | 377 | 8 | 169 | 1.57e-27 | 108 |
| Msa0864670 | AT4G39100.2 | 40.136 | 147 | 79 | 4 | 206 | 352 | 26 | 163 | 8.28e-27 | 105 |
| Msa0864670 | AT4G04260.1 | 36.686 | 169 | 92 | 6 | 211 | 377 | 1 | 156 | 4.57e-25 | 101 |
| Msa0864670 | AT4G04260.3 | 42.241 | 116 | 62 | 3 | 205 | 320 | 26 | 136 | 1.48e-19 | 84.7 |
Find 67 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACTTCCTCATAATGATTT+TGG | 0.150660 | 5_4:+65167538 | None:intergenic |
| CTTACCAATGAAATCCTTAT+TGG | 0.178930 | 5_4:+65167601 | None:intergenic |
| AACTATGTGAAAGAGGAAAA+AGG | 0.272254 | 5_4:-65168722 | Msa0864670:CDS |
| TGAGAAAGGTGAAGGGAAAA+TGG | 0.276513 | 5_4:-65168581 | Msa0864670:CDS |
| TTACCAATGAAATCCTTATT+GGG | 0.288571 | 5_4:+65167602 | None:intergenic |
| AAGTGATACAATGGTGAATT+TGG | 0.296448 | 5_4:-65167657 | Msa0864670:CDS |
| ATCTGTCTGTGTGGCAGAAT+TGG | 0.318589 | 5_4:+65167403 | None:intergenic |
| TGTCAGGATCATATTTATAT+CGG | 0.322892 | 5_4:+65167444 | None:intergenic |
| GTTTGTGAAGAAAATCATTC+CGG | 0.362416 | 5_4:-65167690 | Msa0864670:CDS |
| CGAAACCGCATTCCCCAATA+AGG | 0.363476 | 5_4:-65167615 | Msa0864670:CDS |
| GTATCACTTCTGCATGTTCC+CGG | 0.367443 | 5_4:+65167671 | None:intergenic |
| TTTACTTTCAGTTGGGGATA+AGG | 0.368044 | 5_4:-65167756 | Msa0864670:intron |
| TAGAATCAGATTTGGTGCTT+TGG | 0.379662 | 5_4:-65168529 | Msa0864670:CDS |
| CATGGAAGACATGAGCATTC+AGG | 0.388356 | 5_4:-65168919 | Msa0864670:CDS |
| AGACATGAGCATTCAGGAAC+TGG | 0.397300 | 5_4:-65168913 | Msa0864670:CDS |
| TTCCCCAATAAGGATTTCAT+TGG | 0.412854 | 5_4:-65167605 | Msa0864670:CDS |
| GCTGAGCTTAGAATCAGATT+TGG | 0.423087 | 5_4:-65168537 | Msa0864670:CDS |
| TCTTGAGAATGTCGGTCCTC+TGG | 0.444484 | 5_4:-65167477 | Msa0864670:CDS |
| CATTGAATCATAAAGAGATC+CGG | 0.446125 | 5_4:+65167260 | None:intergenic |
| GAAGATGTAGAATATCTGTT+TGG | 0.446250 | 5_4:+65168811 | None:intergenic |
| AGAGATGAACTATGTGAAAG+AGG | 0.460027 | 5_4:-65168729 | Msa0864670:CDS |
| CAAATGAACCACCCAACAAA+AGG | 0.461572 | 5_4:-65168362 | Msa0864670:CDS |
| TCTGTCTGTGTGGCAGAATT+GGG | 0.463922 | 5_4:+65167404 | None:intergenic |
| TTCTTCACAAACCCCACATA+CGG | 0.468286 | 5_4:+65167701 | None:intergenic |
| GGTGGTTCATTTGTCTGCAA+AGG | 0.475330 | 5_4:+65168372 | None:intergenic |
| GAGAAAGGTGAAGGGAAAAT+GGG | 0.475879 | 5_4:-65168580 | Msa0864670:CDS |
| CTACAATCAGTGCAAAGAAA+AGG | 0.480807 | 5_4:+65167045 | None:intergenic |
| TTTGTGAAGAAAATCATTCC+GGG | 0.487459 | 5_4:-65167689 | Msa0864670:CDS |
| TTAGCTGACAGAGACATGAT+TGG | 0.490113 | 5_4:-65168651 | Msa0864670:CDS |
| CAATAAGGATTTCATTGGTA+AGG | 0.490339 | 5_4:-65167600 | Msa0864670:CDS |
| TCTTCAAAAGGACGTTGAAA+AGG | 0.496162 | 5_4:-65168793 | Msa0864670:CDS |
| AAAGGTGCATCATCATCATC+AGG | 0.499288 | 5_4:-65168327 | Msa0864670:intron |
| ATAAATATGATCCTGACAAA+GGG | 0.501141 | 5_4:-65167439 | Msa0864670:CDS |
| TCTTCACAAACCCCACATAC+GGG | 0.501969 | 5_4:+65167702 | None:intergenic |
| ACAAAGATAGTCCCTTTGTC+AGG | 0.510559 | 5_4:+65167428 | None:intergenic |
| ATGTCAGTTGCCTCGTAACC+CGG | 0.518126 | 5_4:-65167279 | Msa0864670:CDS |
| AGATATTCTACATCTTCAAA+AGG | 0.518205 | 5_4:-65168805 | Msa0864670:CDS |
| CTCTTTATGATTCAATGTGA+AGG | 0.534716 | 5_4:-65167254 | Msa0864670:CDS |
| TTGGGGATAAGGTTCTCCTC+AGG | 0.542548 | 5_4:-65167745 | Msa0864670:CDS |
| AGTTGGAGAAATCAGTGAAG+AGG | 0.544810 | 5_4:-65168470 | Msa0864670:CDS |
| CCTCAGGCCTTCTAAACGTA+AGG | 0.554213 | 5_4:-65167729 | Msa0864670:CDS |
| AAAAGGAGCAAGAATGCTAA+AGG | 0.563448 | 5_4:-65168345 | Msa0864670:CDS |
| AAAGTGCCAAAATCATTATG+AGG | 0.564737 | 5_4:-65167544 | Msa0864670:CDS |
| TATAAATATGATCCTGACAA+AGG | 0.565003 | 5_4:-65167440 | Msa0864670:CDS |
| ATTGAATCATAAAGAGATCC+GGG | 0.568614 | 5_4:+65167261 | None:intergenic |
| TTTGAGTTGAGAAAGGTGAA+GGG | 0.569481 | 5_4:-65168588 | Msa0864670:CDS |
| GTGACTATGATGAGATTGAA+AGG | 0.569941 | 5_4:-65168413 | Msa0864670:CDS |
| TCTTTATGATTCAATGTGAA+GGG | 0.570089 | 5_4:-65167253 | Msa0864670:CDS |
| TTGGGGAATGCGGTTTCGTG+AGG | 0.577003 | 5_4:+65167620 | None:intergenic |
| TTCGTGAGGCCTGTAAAACC+AGG | 0.578182 | 5_4:+65167634 | None:intergenic |
| GAAGAACAATGAACTCGAGT+CGG | 0.583685 | 5_4:-65168616 | Msa0864670:CDS |
| TACCAATGAAATCCTTATTG+GGG | 0.587082 | 5_4:+65167603 | None:intergenic |
| CTTTCTGATCTTGAGAATGT+CGG | 0.588538 | 5_4:-65167485 | Msa0864670:CDS |
| GACAAGGATGAAGAGAATGT+TGG | 0.590848 | 5_4:-65168435 | Msa0864670:CDS |
| GAAATCCTTATTGGGGAATG+CGG | 0.598917 | 5_4:+65167610 | None:intergenic |
| CTTCACAAACCCCACATACG+GGG | 0.600813 | 5_4:+65167703 | None:intergenic |
| ATACAATGGTGAATTTGGCC+TGG | 0.606944 | 5_4:-65167652 | Msa0864670:CDS |
| ACTAACGAGGTTTCAAGCTG+AGG | 0.619227 | 5_4:-65168766 | Msa0864670:CDS |
| TGAGATTGAAAGGGACATTG+TGG | 0.628338 | 5_4:-65168403 | Msa0864670:CDS |
| TGACTATGATGAGATTGAAA+GGG | 0.639185 | 5_4:-65168412 | Msa0864670:CDS |
| TTCACAAACCCCACATACGG+GGG | 0.650762 | 5_4:+65167704 | None:intergenic |
| ATAAAGAGATCCGGGTTACG+AGG | 0.661418 | 5_4:+65167269 | None:intergenic |
| CCTTACGTTTAGAAGGCCTG+AGG | 0.667711 | 5_4:+65167729 | None:intergenic |
| TTACGCAATATCTGTCTGTG+TGG | 0.669496 | 5_4:+65167394 | None:intergenic |
| AACATGCAGAAGTGATACAA+TGG | 0.672535 | 5_4:-65167666 | Msa0864670:CDS |
| TATCGGCAATAGAAATCCAG+AGG | 0.685970 | 5_4:+65167461 | None:intergenic |
| TTGAAAAGGAGAAACTAACG+AGG | 0.777274 | 5_4:-65168779 | Msa0864670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTACAAACTAATAATAATTT+GGG | + | chr5_4:65167687-65167706 | None:intergenic | 10.0% |
| !! | ATTACAAACTAATAATAATT+TGG | + | chr5_4:65167688-65167707 | None:intergenic | 10.0% |
| !! | TTACAAACTAATAATAATTT+GGG | + | chr5_4:65167687-65167706 | None:intergenic | 10.0% |
| !! | ATTACAAACTAATAATAATT+TGG | + | chr5_4:65167688-65167707 | None:intergenic | 10.0% |
| !! | TGATTCTAATTAGTATTAGT+TGG | - | chr5_4:65167710-65167729 | Msa0864670:CDS | 20.0% |
| !! | TATTTCTTTGTATAGGAAAT+AGG | - | chr5_4:65167759-65167778 | Msa0864670:intron | 20.0% |
| !! | ATTTCTTTGTATAGGAAATA+GGG | - | chr5_4:65167760-65167779 | Msa0864670:intron | 20.0% |
| !!! | TTGTTTTTTAAAATAGGACT+AGG | - | chr5_4:65167787-65167806 | Msa0864670:intron | 20.0% |
| !!! | CTCTTATATTTTGAACATAA+TGG | - | chr5_4:65167884-65167903 | Msa0864670:intron | 20.0% |
| !!! | AATATTTGATTTATTGTTCC+TGG | - | chr5_4:65168002-65168021 | Msa0864670:intron | 20.0% |
| !! | ATATACAAAATAACAAATCC+AGG | + | chr5_4:65168023-65168042 | None:intergenic | 20.0% |
| !!! | GGATTTGTTATTTTGTATAT+TGG | - | chr5_4:65168023-65168042 | Msa0864670:intron | 20.0% |
| !!! | TTTGGAGAACTTAATTATTT+TGG | - | chr5_4:65168623-65168642 | Msa0864670:CDS | 20.0% |
| !! | TATAGAAAATAGATAGATAC+TGG | + | chr5_4:65168762-65168781 | None:intergenic | 20.0% |
| !! | TGATTCTAATTAGTATTAGT+TGG | - | chr5_4:65167710-65167729 | Msa0864670:CDS | 20.0% |
| !! | TATTTCTTTGTATAGGAAAT+AGG | - | chr5_4:65167759-65167778 | Msa0864670:intron | 20.0% |
| !! | ATTTCTTTGTATAGGAAATA+GGG | - | chr5_4:65167760-65167779 | Msa0864670:intron | 20.0% |
| !!! | TTGTTTTTTAAAATAGGACT+AGG | - | chr5_4:65167787-65167806 | Msa0864670:intron | 20.0% |
| !!! | CTCTTATATTTTGAACATAA+TGG | - | chr5_4:65167884-65167903 | Msa0864670:intron | 20.0% |
| !!! | AATATTTGATTTATTGTTCC+TGG | - | chr5_4:65168002-65168021 | Msa0864670:intron | 20.0% |
| !! | ATATACAAAATAACAAATCC+AGG | + | chr5_4:65168023-65168042 | None:intergenic | 20.0% |
| !!! | GGATTTGTTATTTTGTATAT+TGG | - | chr5_4:65168023-65168042 | Msa0864670:intron | 20.0% |
| !!! | TTTGGAGAACTTAATTATTT+TGG | - | chr5_4:65168623-65168642 | Msa0864670:CDS | 20.0% |
| !! | TATAGAAAATAGATAGATAC+TGG | + | chr5_4:65168762-65168781 | None:intergenic | 20.0% |
| ! | AGATATTCTACATCTTCAAA+AGG | - | chr5_4:65167148-65167167 | Msa0864670:intron | 25.0% |
| !! | TAATTAGTATTAGTTGGTAC+TGG | - | chr5_4:65167716-65167735 | Msa0864670:CDS | 25.0% |
| !!! | GGAGACTTGTTTTTTAAAAT+AGG | - | chr5_4:65167781-65167800 | Msa0864670:intron | 25.0% |
| ! | TTTGTACCATCATACAAAAA+TGG | - | chr5_4:65167860-65167879 | Msa0864670:intron | 25.0% |
| !! | TGATTTTGTTCATTGTCTAT+TGG | - | chr5_4:65167976-65167995 | Msa0864670:intron | 25.0% |
| ! | TGAATAATATTCAAGGACAT+GGG | + | chr5_4:65168162-65168181 | None:intergenic | 25.0% |
| ! | TTGAATAATATTCAAGGACA+TGG | + | chr5_4:65168163-65168182 | None:intergenic | 25.0% |
| !!! | TCTTTGTTTTACTTTCAGTT+GGG | - | chr5_4:65168190-65168209 | Msa0864670:intron | 25.0% |
| ! | TTACCAATGAAATCCTTATT+GGG | + | chr5_4:65168354-65168373 | None:intergenic | 25.0% |
| ! | TGTCAGGATCATATTTATAT+CGG | + | chr5_4:65168512-65168531 | None:intergenic | 25.0% |
| ! | TATAAATATGATCCTGACAA+AGG | - | chr5_4:65168513-65168532 | Msa0864670:CDS | 25.0% |
| ! | ATAAATATGATCCTGACAAA+GGG | - | chr5_4:65168514-65168533 | Msa0864670:CDS | 25.0% |
| !!! | CACTAGTTTTGTTTTTGATT+TGG | - | chr5_4:65168605-65168624 | Msa0864670:CDS | 25.0% |
| ! | TCTTTATGATTCAATGTGAA+GGG | - | chr5_4:65168700-65168719 | Msa0864670:CDS | 25.0% |
| !!! | TTAGTCATTTTTAAGCAAGA+AGG | + | chr5_4:65168866-65168885 | None:intergenic | 25.0% |
| ! | AGATATTCTACATCTTCAAA+AGG | - | chr5_4:65167148-65167167 | Msa0864670:intron | 25.0% |
| !! | TAATTAGTATTAGTTGGTAC+TGG | - | chr5_4:65167716-65167735 | Msa0864670:CDS | 25.0% |
| !!! | GGAGACTTGTTTTTTAAAAT+AGG | - | chr5_4:65167781-65167800 | Msa0864670:intron | 25.0% |
| ! | TTTGTACCATCATACAAAAA+TGG | - | chr5_4:65167860-65167879 | Msa0864670:intron | 25.0% |
| !! | TGATTTTGTTCATTGTCTAT+TGG | - | chr5_4:65167976-65167995 | Msa0864670:intron | 25.0% |
| ! | TGAATAATATTCAAGGACAT+GGG | + | chr5_4:65168162-65168181 | None:intergenic | 25.0% |
| ! | TTGAATAATATTCAAGGACA+TGG | + | chr5_4:65168163-65168182 | None:intergenic | 25.0% |
| !!! | TCTTTGTTTTACTTTCAGTT+GGG | - | chr5_4:65168190-65168209 | Msa0864670:intron | 25.0% |
| ! | TTACCAATGAAATCCTTATT+GGG | + | chr5_4:65168354-65168373 | None:intergenic | 25.0% |
| ! | TGTCAGGATCATATTTATAT+CGG | + | chr5_4:65168512-65168531 | None:intergenic | 25.0% |
| ! | TATAAATATGATCCTGACAA+AGG | - | chr5_4:65168513-65168532 | Msa0864670:CDS | 25.0% |
| ! | ATAAATATGATCCTGACAAA+GGG | - | chr5_4:65168514-65168533 | Msa0864670:CDS | 25.0% |
| !!! | CACTAGTTTTGTTTTTGATT+TGG | - | chr5_4:65168605-65168624 | Msa0864670:CDS | 25.0% |
| ! | TCTTTATGATTCAATGTGAA+GGG | - | chr5_4:65168700-65168719 | Msa0864670:CDS | 25.0% |
| !!! | TTAGTCATTTTTAAGCAAGA+AGG | + | chr5_4:65168866-65168885 | None:intergenic | 25.0% |
| !! | AGATTTTGATAGAGTTGAAG+AGG | - | chr5_4:65167094-65167113 | Msa0864670:CDS | 30.0% |
| GAAGATGTAGAATATCTGTT+TGG | + | chr5_4:65167145-65167164 | None:intergenic | 30.0% | |
| AACTATGTGAAAGAGGAAAA+AGG | - | chr5_4:65167231-65167250 | Msa0864670:intron | 30.0% | |
| ACTATGTGAAAGAGGAAAAA+GGG | - | chr5_4:65167232-65167251 | Msa0864670:intron | 30.0% | |
| GGAGAATGAAAAAAATGCTT+TGG | - | chr5_4:65167445-65167464 | Msa0864670:CDS | 30.0% | |
| GGTTGTGAAAAATATTGAGT+TGG | - | chr5_4:65167466-65167485 | Msa0864670:CDS | 30.0% | |
| TGACTATGATGAGATTGAAA+GGG | - | chr5_4:65167541-65167560 | Msa0864670:CDS | 30.0% | |
| CTATACAAAGAAATAGAACC+GGG | + | chr5_4:65167754-65167773 | None:intergenic | 30.0% | |
| CCTATACAAAGAAATAGAAC+CGG | + | chr5_4:65167755-65167774 | None:intergenic | 30.0% | |
| GTAAACAATTGATCAACATG+TGG | - | chr5_4:65167825-65167844 | Msa0864670:intron | 30.0% | |
| !! | AAGAGTCCATTTTTGTATGA+TGG | + | chr5_4:65167869-65167888 | None:intergenic | 30.0% |
| !! | CAGGCTTTGAATAATATTCA+AGG | + | chr5_4:65168169-65168188 | None:intergenic | 30.0% |
| CTTGAATATTATTCAAAGCC+TGG | - | chr5_4:65168167-65168186 | Msa0864670:intron | 30.0% | |
| !!! | GTCTTTGTTTTACTTTCAGT+TGG | - | chr5_4:65168189-65168208 | Msa0864670:intron | 30.0% |
| !!! | CTTTGTTTTACTTTCAGTTG+GGG | - | chr5_4:65168191-65168210 | Msa0864670:intron | 30.0% |
| GTTTGTGAAGAAAATCATTC+CGG | - | chr5_4:65168263-65168282 | Msa0864670:intron | 30.0% | |
| TTTGTGAAGAAAATCATTCC+GGG | - | chr5_4:65168264-65168283 | Msa0864670:intron | 30.0% | |
| AAGTGATACAATGGTGAATT+TGG | - | chr5_4:65168296-65168315 | Msa0864670:intron | 30.0% | |
| TACCAATGAAATCCTTATTG+GGG | + | chr5_4:65168353-65168372 | None:intergenic | 30.0% | |
| CTTACCAATGAAATCCTTAT+TGG | + | chr5_4:65168355-65168374 | None:intergenic | 30.0% | |
| CAATAAGGATTTCATTGGTA+AGG | - | chr5_4:65168353-65168372 | Msa0864670:CDS | 30.0% | |
| ! | AAAGTGCCAAAATCATTATG+AGG | - | chr5_4:65168409-65168428 | Msa0864670:CDS | 30.0% |
| ! | ACACTTCCTCATAATGATTT+TGG | + | chr5_4:65168418-65168437 | None:intergenic | 30.0% |
| !! | TGGTTTGTGTTTCTTTTTGA+AGG | - | chr5_4:65168643-65168662 | Msa0864670:CDS | 30.0% |
| ATTGAATCATAAAGAGATCC+GGG | + | chr5_4:65168695-65168714 | None:intergenic | 30.0% | |
| CATTGAATCATAAAGAGATC+CGG | + | chr5_4:65168696-65168715 | None:intergenic | 30.0% | |
| CTCTTTATGATTCAATGTGA+AGG | - | chr5_4:65168699-65168718 | Msa0864670:CDS | 30.0% | |
| !! | TCATTTTTAAGCAAGAAGGA+TGG | + | chr5_4:65168862-65168881 | None:intergenic | 30.0% |
| !! | AGATTTTGATAGAGTTGAAG+AGG | - | chr5_4:65167094-65167113 | Msa0864670:CDS | 30.0% |
| GAAGATGTAGAATATCTGTT+TGG | + | chr5_4:65167145-65167164 | None:intergenic | 30.0% | |
| AACTATGTGAAAGAGGAAAA+AGG | - | chr5_4:65167231-65167250 | Msa0864670:intron | 30.0% | |
| ACTATGTGAAAGAGGAAAAA+GGG | - | chr5_4:65167232-65167251 | Msa0864670:intron | 30.0% | |
| GGAGAATGAAAAAAATGCTT+TGG | - | chr5_4:65167445-65167464 | Msa0864670:CDS | 30.0% | |
| GGTTGTGAAAAATATTGAGT+TGG | - | chr5_4:65167466-65167485 | Msa0864670:CDS | 30.0% | |
| TGACTATGATGAGATTGAAA+GGG | - | chr5_4:65167541-65167560 | Msa0864670:CDS | 30.0% | |
| CTATACAAAGAAATAGAACC+GGG | + | chr5_4:65167754-65167773 | None:intergenic | 30.0% | |
| CCTATACAAAGAAATAGAAC+CGG | + | chr5_4:65167755-65167774 | None:intergenic | 30.0% | |
| GTAAACAATTGATCAACATG+TGG | - | chr5_4:65167825-65167844 | Msa0864670:intron | 30.0% | |
| !! | AAGAGTCCATTTTTGTATGA+TGG | + | chr5_4:65167869-65167888 | None:intergenic | 30.0% |
| !! | CAGGCTTTGAATAATATTCA+AGG | + | chr5_4:65168169-65168188 | None:intergenic | 30.0% |
| CTTGAATATTATTCAAAGCC+TGG | - | chr5_4:65168167-65168186 | Msa0864670:intron | 30.0% | |
| !!! | GTCTTTGTTTTACTTTCAGT+TGG | - | chr5_4:65168189-65168208 | Msa0864670:intron | 30.0% |
| !!! | CTTTGTTTTACTTTCAGTTG+GGG | - | chr5_4:65168191-65168210 | Msa0864670:intron | 30.0% |
| GTTTGTGAAGAAAATCATTC+CGG | - | chr5_4:65168263-65168282 | Msa0864670:intron | 30.0% | |
| TTTGTGAAGAAAATCATTCC+GGG | - | chr5_4:65168264-65168283 | Msa0864670:intron | 30.0% | |
| AAGTGATACAATGGTGAATT+TGG | - | chr5_4:65168296-65168315 | Msa0864670:intron | 30.0% | |
| TACCAATGAAATCCTTATTG+GGG | + | chr5_4:65168353-65168372 | None:intergenic | 30.0% | |
| CTTACCAATGAAATCCTTAT+TGG | + | chr5_4:65168355-65168374 | None:intergenic | 30.0% | |
| CAATAAGGATTTCATTGGTA+AGG | - | chr5_4:65168353-65168372 | Msa0864670:CDS | 30.0% | |
| ! | AAAGTGCCAAAATCATTATG+AGG | - | chr5_4:65168409-65168428 | Msa0864670:CDS | 30.0% |
| ! | ACACTTCCTCATAATGATTT+TGG | + | chr5_4:65168418-65168437 | None:intergenic | 30.0% |
| !! | TGGTTTGTGTTTCTTTTTGA+AGG | - | chr5_4:65168643-65168662 | Msa0864670:CDS | 30.0% |
| ATTGAATCATAAAGAGATCC+GGG | + | chr5_4:65168695-65168714 | None:intergenic | 30.0% | |
| CATTGAATCATAAAGAGATC+CGG | + | chr5_4:65168696-65168715 | None:intergenic | 30.0% | |
| CTCTTTATGATTCAATGTGA+AGG | - | chr5_4:65168699-65168718 | Msa0864670:CDS | 30.0% | |
| !! | TCATTTTTAAGCAAGAAGGA+TGG | + | chr5_4:65168862-65168881 | None:intergenic | 30.0% |
| !! | TAGAGTTGAAGAGGTTTTAG+TGG | - | chr5_4:65167103-65167122 | Msa0864670:intron | 35.0% |
| TCTTCAAAAGGACGTTGAAA+AGG | - | chr5_4:65167160-65167179 | Msa0864670:intron | 35.0% | |
| TTGAAAAGGAGAAACTAACG+AGG | - | chr5_4:65167174-65167193 | Msa0864670:intron | 35.0% | |
| AGAGATGAACTATGTGAAAG+AGG | - | chr5_4:65167224-65167243 | Msa0864670:intron | 35.0% | |
| !!! | GGAAGTTTTTGAGTTGAGAA+AGG | - | chr5_4:65167358-65167377 | Msa0864670:intron | 35.0% |
| !!! | TTTTGAGTTGAGAAAGGTGA+AGG | - | chr5_4:65167364-65167383 | Msa0864670:intron | 35.0% |
| !! | TTTGAGTTGAGAAAGGTGAA+GGG | - | chr5_4:65167365-65167384 | Msa0864670:intron | 35.0% |
| !! | TAGAATCAGATTTGGTGCTT+TGG | - | chr5_4:65167424-65167443 | Msa0864670:CDS | 35.0% |
| !!! | GAGGAAAAGTTTTGAAGACA+AGG | - | chr5_4:65167502-65167521 | Msa0864670:CDS | 35.0% |
| GTGACTATGATGAGATTGAA+AGG | - | chr5_4:65167540-65167559 | Msa0864670:CDS | 35.0% | |
| AAAAGGAGCAAGAATGCTAA+AGG | - | chr5_4:65167608-65167627 | Msa0864670:CDS | 35.0% | |
| ! | CCGGTTCTATTTCTTTGTAT+AGG | - | chr5_4:65167752-65167771 | Msa0864670:intron | 35.0% |
| AAGAGCTCATTTCTGTATGA+TGG | + | chr5_4:65168072-65168091 | None:intergenic | 35.0% | |
| ATGAGCTCTTATGTCATTGA+AGG | - | chr5_4:65168082-65168101 | Msa0864670:intron | 35.0% | |
| TGAGCTCTTATGTCATTGAA+GGG | - | chr5_4:65168083-65168102 | Msa0864670:intron | 35.0% | |
| ! | TGTTACCTTTTATGATCTCC+CGG | + | chr5_4:65168111-65168130 | None:intergenic | 35.0% |
| GAAGTCAAAGTGAAATGAGT+CGG | + | chr5_4:65168140-65168159 | None:intergenic | 35.0% | |
| CTGAAAGTAAAACAAAGACC+AGG | + | chr5_4:65168188-65168207 | None:intergenic | 35.0% | |
| TTTACTTTCAGTTGGGGATA+AGG | - | chr5_4:65168197-65168216 | Msa0864670:intron | 35.0% | |
| AACATGCAGAAGTGATACAA+TGG | - | chr5_4:65168287-65168306 | Msa0864670:intron | 35.0% | |
| TTCCCCAATAAGGATTTCAT+TGG | - | chr5_4:65168348-65168367 | Msa0864670:CDS | 35.0% | |
| CTTTCTGATCTTGAGAATGT+CGG | - | chr5_4:65168468-65168487 | Msa0864670:CDS | 35.0% | |
| ! | TTTTTAATCACCCTTCTTGC+AGG | - | chr5_4:65168834-65168853 | Msa0864670:CDS | 35.0% |
| CTACAATCAGTGCAAAGAAA+AGG | + | chr5_4:65168911-65168930 | None:intergenic | 35.0% | |
| !! | TAGAGTTGAAGAGGTTTTAG+TGG | - | chr5_4:65167103-65167122 | Msa0864670:intron | 35.0% |
| TCTTCAAAAGGACGTTGAAA+AGG | - | chr5_4:65167160-65167179 | Msa0864670:intron | 35.0% | |
| TTGAAAAGGAGAAACTAACG+AGG | - | chr5_4:65167174-65167193 | Msa0864670:intron | 35.0% | |
| AGAGATGAACTATGTGAAAG+AGG | - | chr5_4:65167224-65167243 | Msa0864670:intron | 35.0% | |
| !!! | GGAAGTTTTTGAGTTGAGAA+AGG | - | chr5_4:65167358-65167377 | Msa0864670:intron | 35.0% |
| !!! | TTTTGAGTTGAGAAAGGTGA+AGG | - | chr5_4:65167364-65167383 | Msa0864670:intron | 35.0% |
| !! | TTTGAGTTGAGAAAGGTGAA+GGG | - | chr5_4:65167365-65167384 | Msa0864670:intron | 35.0% |
| !! | TAGAATCAGATTTGGTGCTT+TGG | - | chr5_4:65167424-65167443 | Msa0864670:CDS | 35.0% |
| !!! | GAGGAAAAGTTTTGAAGACA+AGG | - | chr5_4:65167502-65167521 | Msa0864670:CDS | 35.0% |
| GTGACTATGATGAGATTGAA+AGG | - | chr5_4:65167540-65167559 | Msa0864670:CDS | 35.0% | |
| AAAAGGAGCAAGAATGCTAA+AGG | - | chr5_4:65167608-65167627 | Msa0864670:CDS | 35.0% | |
| ! | CCGGTTCTATTTCTTTGTAT+AGG | - | chr5_4:65167752-65167771 | Msa0864670:intron | 35.0% |
| AAGAGCTCATTTCTGTATGA+TGG | + | chr5_4:65168072-65168091 | None:intergenic | 35.0% | |
| ATGAGCTCTTATGTCATTGA+AGG | - | chr5_4:65168082-65168101 | Msa0864670:intron | 35.0% | |
| TGAGCTCTTATGTCATTGAA+GGG | - | chr5_4:65168083-65168102 | Msa0864670:intron | 35.0% | |
| ! | TGTTACCTTTTATGATCTCC+CGG | + | chr5_4:65168111-65168130 | None:intergenic | 35.0% |
| GAAGTCAAAGTGAAATGAGT+CGG | + | chr5_4:65168140-65168159 | None:intergenic | 35.0% | |
| CTGAAAGTAAAACAAAGACC+AGG | + | chr5_4:65168188-65168207 | None:intergenic | 35.0% | |
| TTTACTTTCAGTTGGGGATA+AGG | - | chr5_4:65168197-65168216 | Msa0864670:intron | 35.0% | |
| AACATGCAGAAGTGATACAA+TGG | - | chr5_4:65168287-65168306 | Msa0864670:intron | 35.0% | |
| TTCCCCAATAAGGATTTCAT+TGG | - | chr5_4:65168348-65168367 | Msa0864670:CDS | 35.0% | |
| CTTTCTGATCTTGAGAATGT+CGG | - | chr5_4:65168468-65168487 | Msa0864670:CDS | 35.0% | |
| ! | TTTTTAATCACCCTTCTTGC+AGG | - | chr5_4:65168834-65168853 | Msa0864670:CDS | 35.0% |
| CTACAATCAGTGCAAAGAAA+AGG | + | chr5_4:65168911-65168930 | None:intergenic | 35.0% | |
| TTAGCTGACAGAGACATGAT+TGG | - | chr5_4:65167302-65167321 | Msa0864670:intron | 40.0% | |
| GAAGAACAATGAACTCGAGT+CGG | - | chr5_4:65167337-65167356 | Msa0864670:intron | 40.0% | |
| TGAGAAAGGTGAAGGGAAAA+TGG | - | chr5_4:65167372-65167391 | Msa0864670:intron | 40.0% | |
| GAGAAAGGTGAAGGGAAAAT+GGG | - | chr5_4:65167373-65167392 | Msa0864670:intron | 40.0% | |
| GCTGAGCTTAGAATCAGATT+TGG | - | chr5_4:65167416-65167435 | Msa0864670:CDS | 40.0% | |
| AGTTGGAGAAATCAGTGAAG+AGG | - | chr5_4:65167483-65167502 | Msa0864670:CDS | 40.0% | |
| GACAAGGATGAAGAGAATGT+TGG | - | chr5_4:65167518-65167537 | Msa0864670:CDS | 40.0% | |
| TGAGATTGAAAGGGACATTG+TGG | - | chr5_4:65167550-65167569 | Msa0864670:CDS | 40.0% | |
| CAAATGAACCACCCAACAAA+AGG | - | chr5_4:65167591-65167610 | Msa0864670:CDS | 40.0% | |
| ! | GCATTCTTGCTCCTTTTGTT+GGG | + | chr5_4:65167605-65167624 | None:intergenic | 40.0% |
| ! | AGCATTCTTGCTCCTTTTGT+TGG | + | chr5_4:65167606-65167625 | None:intergenic | 40.0% |
| ! | AAAGGTGCATCATCATCATC+AGG | - | chr5_4:65167626-65167645 | Msa0864670:CDS | 40.0% |
| ! | GTTACCTTTTATGATCTCCC+GGG | + | chr5_4:65168110-65168129 | None:intergenic | 40.0% |
| TTCTTCACAAACCCCACATA+CGG | + | chr5_4:65168255-65168274 | None:intergenic | 40.0% | |
| ATACAATGGTGAATTTGGCC+TGG | - | chr5_4:65168301-65168320 | Msa0864670:intron | 40.0% | |
| !!! | TGAATTTGGCCTGGTTTTAC+AGG | - | chr5_4:65168310-65168329 | Msa0864670:intron | 40.0% |
| GAAATCCTTATTGGGGAATG+CGG | + | chr5_4:65168346-65168365 | None:intergenic | 40.0% | |
| TATCGGCAATAGAAATCCAG+AGG | + | chr5_4:65168495-65168514 | None:intergenic | 40.0% | |
| ACAAAGATAGTCCCTTTGTC+AGG | + | chr5_4:65168528-65168547 | None:intergenic | 40.0% | |
| TTACGCAATATCTGTCTGTG+TGG | + | chr5_4:65168562-65168581 | None:intergenic | 40.0% | |
| GTGAAGGGAGATGCAAAAAA+TGG | - | chr5_4:65168715-65168734 | Msa0864670:CDS | 40.0% | |
| TTAGCTGACAGAGACATGAT+TGG | - | chr5_4:65167302-65167321 | Msa0864670:intron | 40.0% | |
| GAAGAACAATGAACTCGAGT+CGG | - | chr5_4:65167337-65167356 | Msa0864670:intron | 40.0% | |
| TGAGAAAGGTGAAGGGAAAA+TGG | - | chr5_4:65167372-65167391 | Msa0864670:intron | 40.0% | |
| GAGAAAGGTGAAGGGAAAAT+GGG | - | chr5_4:65167373-65167392 | Msa0864670:intron | 40.0% | |
| GCTGAGCTTAGAATCAGATT+TGG | - | chr5_4:65167416-65167435 | Msa0864670:CDS | 40.0% | |
| AGTTGGAGAAATCAGTGAAG+AGG | - | chr5_4:65167483-65167502 | Msa0864670:CDS | 40.0% | |
| GACAAGGATGAAGAGAATGT+TGG | - | chr5_4:65167518-65167537 | Msa0864670:CDS | 40.0% | |
| TGAGATTGAAAGGGACATTG+TGG | - | chr5_4:65167550-65167569 | Msa0864670:CDS | 40.0% | |
| CAAATGAACCACCCAACAAA+AGG | - | chr5_4:65167591-65167610 | Msa0864670:CDS | 40.0% | |
| ! | GCATTCTTGCTCCTTTTGTT+GGG | + | chr5_4:65167605-65167624 | None:intergenic | 40.0% |
| ! | AGCATTCTTGCTCCTTTTGT+TGG | + | chr5_4:65167606-65167625 | None:intergenic | 40.0% |
| ! | AAAGGTGCATCATCATCATC+AGG | - | chr5_4:65167626-65167645 | Msa0864670:CDS | 40.0% |
| ! | GTTACCTTTTATGATCTCCC+GGG | + | chr5_4:65168110-65168129 | None:intergenic | 40.0% |
| TTCTTCACAAACCCCACATA+CGG | + | chr5_4:65168255-65168274 | None:intergenic | 40.0% | |
| ATACAATGGTGAATTTGGCC+TGG | - | chr5_4:65168301-65168320 | Msa0864670:intron | 40.0% | |
| !!! | TGAATTTGGCCTGGTTTTAC+AGG | - | chr5_4:65168310-65168329 | Msa0864670:intron | 40.0% |
| GAAATCCTTATTGGGGAATG+CGG | + | chr5_4:65168346-65168365 | None:intergenic | 40.0% | |
| TATCGGCAATAGAAATCCAG+AGG | + | chr5_4:65168495-65168514 | None:intergenic | 40.0% | |
| ACAAAGATAGTCCCTTTGTC+AGG | + | chr5_4:65168528-65168547 | None:intergenic | 40.0% | |
| TTACGCAATATCTGTCTGTG+TGG | + | chr5_4:65168562-65168581 | None:intergenic | 40.0% | |
| GTGAAGGGAGATGCAAAAAA+TGG | - | chr5_4:65168715-65168734 | Msa0864670:CDS | 40.0% | |
| AGACATGAGCATTCAGGAAC+TGG | - | chr5_4:65167040-65167059 | Msa0864670:CDS | 45.0% | |
| ACTAACGAGGTTTCAAGCTG+AGG | - | chr5_4:65167187-65167206 | Msa0864670:intron | 45.0% | |
| GGTGGTTCATTTGTCTGCAA+AGG | + | chr5_4:65167584-65167603 | None:intergenic | 45.0% | |
| ! | TTCTTGCTCCTTTTGTTGGG+TGG | + | chr5_4:65167602-65167621 | None:intergenic | 45.0% |
| !!! | TACTGGTTTTGCTTGTTGCC+CGG | - | chr5_4:65167733-65167752 | Msa0864670:CDS | 45.0% |
| CTTATGTCATTGAAGGGTCC+CGG | - | chr5_4:65168089-65168108 | Msa0864670:intron | 45.0% | |
| TTATGTCATTGAAGGGTCCC+GGG | - | chr5_4:65168090-65168109 | Msa0864670:intron | 45.0% | |
| TCTTCACAAACCCCACATAC+GGG | + | chr5_4:65168254-65168273 | None:intergenic | 45.0% | |
| GTATCACTTCTGCATGTTCC+CGG | + | chr5_4:65168285-65168304 | None:intergenic | 45.0% | |
| TCTGTCTGTGTGGCAGAATT+GGG | + | chr5_4:65168552-65168571 | None:intergenic | 45.0% | |
| ATCTGTCTGTGTGGCAGAAT+TGG | + | chr5_4:65168553-65168572 | None:intergenic | 45.0% | |
| ATAAAGAGATCCGGGTTACG+AGG | + | chr5_4:65168687-65168706 | None:intergenic | 45.0% | |
| AAGGATGGTACCTGCAAGAA+GGG | + | chr5_4:65168847-65168866 | None:intergenic | 45.0% | |
| AGACATGAGCATTCAGGAAC+TGG | - | chr5_4:65167040-65167059 | Msa0864670:CDS | 45.0% | |
| ACTAACGAGGTTTCAAGCTG+AGG | - | chr5_4:65167187-65167206 | Msa0864670:intron | 45.0% | |
| GGTGGTTCATTTGTCTGCAA+AGG | + | chr5_4:65167584-65167603 | None:intergenic | 45.0% | |
| ! | TTCTTGCTCCTTTTGTTGGG+TGG | + | chr5_4:65167602-65167621 | None:intergenic | 45.0% |
| !!! | TACTGGTTTTGCTTGTTGCC+CGG | - | chr5_4:65167733-65167752 | Msa0864670:CDS | 45.0% |
| CTTATGTCATTGAAGGGTCC+CGG | - | chr5_4:65168089-65168108 | Msa0864670:intron | 45.0% | |
| TTATGTCATTGAAGGGTCCC+GGG | - | chr5_4:65168090-65168109 | Msa0864670:intron | 45.0% | |
| TCTTCACAAACCCCACATAC+GGG | + | chr5_4:65168254-65168273 | None:intergenic | 45.0% | |
| GTATCACTTCTGCATGTTCC+CGG | + | chr5_4:65168285-65168304 | None:intergenic | 45.0% | |
| TCTGTCTGTGTGGCAGAATT+GGG | + | chr5_4:65168552-65168571 | None:intergenic | 45.0% | |
| ATCTGTCTGTGTGGCAGAAT+TGG | + | chr5_4:65168553-65168572 | None:intergenic | 45.0% | |
| ATAAAGAGATCCGGGTTACG+AGG | + | chr5_4:65168687-65168706 | None:intergenic | 45.0% | |
| AAGGATGGTACCTGCAAGAA+GGG | + | chr5_4:65168847-65168866 | None:intergenic | 45.0% | |
| !! | TTAAAAATTAATTGAATTAA+AGG | + | chr5_4:65168821-65168840 | None:intergenic | 5.0% |
| !! | TTAAAAATTAATTGAATTAA+AGG | + | chr5_4:65168821-65168840 | None:intergenic | 5.0% |
| TTGGGGATAAGGTTCTCCTC+AGG | - | chr5_4:65168208-65168227 | Msa0864670:intron | 50.0% | |
| CCTTACGTTTAGAAGGCCTG+AGG | + | chr5_4:65168227-65168246 | None:intergenic | 50.0% | |
| CCTCAGGCCTTCTAAACGTA+AGG | - | chr5_4:65168224-65168243 | Msa0864670:intron | 50.0% | |
| TTCACAAACCCCACATACGG+GGG | + | chr5_4:65168252-65168271 | None:intergenic | 50.0% | |
| CTTCACAAACCCCACATACG+GGG | + | chr5_4:65168253-65168272 | None:intergenic | 50.0% | |
| TTCGTGAGGCCTGTAAAACC+AGG | + | chr5_4:65168322-65168341 | None:intergenic | 50.0% | |
| CGAAACCGCATTCCCCAATA+AGG | - | chr5_4:65168338-65168357 | Msa0864670:CDS | 50.0% | |
| TCTTGAGAATGTCGGTCCTC+TGG | - | chr5_4:65168476-65168495 | Msa0864670:CDS | 50.0% | |
| ATGTCAGTTGCCTCGTAACC+CGG | - | chr5_4:65168674-65168693 | Msa0864670:CDS | 50.0% | |
| GAAGGATGGTACCTGCAAGA+AGG | + | chr5_4:65168848-65168867 | None:intergenic | 50.0% | |
| TTGGGGATAAGGTTCTCCTC+AGG | - | chr5_4:65168208-65168227 | Msa0864670:intron | 50.0% | |
| CCTTACGTTTAGAAGGCCTG+AGG | + | chr5_4:65168227-65168246 | None:intergenic | 50.0% | |
| CCTCAGGCCTTCTAAACGTA+AGG | - | chr5_4:65168224-65168243 | Msa0864670:intron | 50.0% | |
| TTCACAAACCCCACATACGG+GGG | + | chr5_4:65168252-65168271 | None:intergenic | 50.0% | |
| CTTCACAAACCCCACATACG+GGG | + | chr5_4:65168253-65168272 | None:intergenic | 50.0% | |
| TTCGTGAGGCCTGTAAAACC+AGG | + | chr5_4:65168322-65168341 | None:intergenic | 50.0% | |
| CGAAACCGCATTCCCCAATA+AGG | - | chr5_4:65168338-65168357 | Msa0864670:CDS | 50.0% | |
| TCTTGAGAATGTCGGTCCTC+TGG | - | chr5_4:65168476-65168495 | Msa0864670:CDS | 50.0% | |
| ATGTCAGTTGCCTCGTAACC+CGG | - | chr5_4:65168674-65168693 | Msa0864670:CDS | 50.0% | |
| GAAGGATGGTACCTGCAAGA+AGG | + | chr5_4:65168848-65168867 | None:intergenic | 50.0% | |
| GGGTCCCGGGAGATCATAAA+AGG | - | chr5_4:65168103-65168122 | Msa0864670:intron | 55.0% | |
| GGGGGCTCCTTACGTTTAGA+AGG | + | chr5_4:65168234-65168253 | None:intergenic | 55.0% | |
| TTGGGGAATGCGGTTTCGTG+AGG | + | chr5_4:65168336-65168355 | None:intergenic | 55.0% | |
| GGGTCCCGGGAGATCATAAA+AGG | - | chr5_4:65168103-65168122 | Msa0864670:intron | 55.0% | |
| GGGGGCTCCTTACGTTTAGA+AGG | + | chr5_4:65168234-65168253 | None:intergenic | 55.0% | |
| TTGGGGAATGCGGTTTCGTG+AGG | + | chr5_4:65168336-65168355 | None:intergenic | 55.0% | |
| ACGTAAGGAGCCCCCGTATG+TGG | - | chr5_4:65168239-65168258 | Msa0864670:intron | 60.0% | |
| CGTAAGGAGCCCCCGTATGT+GGG | - | chr5_4:65168240-65168259 | Msa0864670:intron | 60.0% | |
| GTAAGGAGCCCCCGTATGTG+GGG | - | chr5_4:65168241-65168260 | Msa0864670:intron | 60.0% | |
| ACGTAAGGAGCCCCCGTATG+TGG | - | chr5_4:65168239-65168258 | Msa0864670:intron | 60.0% | |
| CGTAAGGAGCCCCCGTATGT+GGG | - | chr5_4:65168240-65168259 | Msa0864670:intron | 60.0% | |
| GTAAGGAGCCCCCGTATGTG+GGG | - | chr5_4:65168241-65168260 | Msa0864670:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 65167035 | 65168940 | 65167035 | ID=Msa0864670;Name=Msa0864670 |
| chr5_4 | mRNA | 65167035 | 65168940 | 65167035 | ID=Msa0864670-mRNA-1;Parent=Msa0864670;Name=Msa0864670-mRNA-1;_AED=0.15;_eAED=0.16;_QI=0|0|0|1|1|1|4|0|379 |
| chr5_4 | exon | 65168328 | 65168940 | 65168328 | ID=Msa0864670-mRNA-1:exon:20566;Parent=Msa0864670-mRNA-1 |
| chr5_4 | exon | 65167398 | 65167767 | 65167398 | ID=Msa0864670-mRNA-1:exon:20565;Parent=Msa0864670-mRNA-1 |
| chr5_4 | exon | 65167239 | 65167310 | 65167239 | ID=Msa0864670-mRNA-1:exon:20564;Parent=Msa0864670-mRNA-1 |
| chr5_4 | exon | 65167035 | 65167119 | 65167035 | ID=Msa0864670-mRNA-1:exon:20563;Parent=Msa0864670-mRNA-1 |
| chr5_4 | CDS | 65168328 | 65168940 | 65168328 | ID=Msa0864670-mRNA-1:cds;Parent=Msa0864670-mRNA-1 |
| chr5_4 | CDS | 65167398 | 65167767 | 65167398 | ID=Msa0864670-mRNA-1:cds;Parent=Msa0864670-mRNA-1 |
| chr5_4 | CDS | 65167239 | 65167310 | 65167239 | ID=Msa0864670-mRNA-1:cds;Parent=Msa0864670-mRNA-1 |
| chr5_4 | CDS | 65167035 | 65167119 | 65167035 | ID=Msa0864670-mRNA-1:cds;Parent=Msa0864670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
