AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0865360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0865360 MtrunA17_Chr1g0211661 76.457 892 138 11 1 847 1 865 0.0 1291
Msa0865360 MtrunA17_Chr1g0211711 68.346 774 209 7 164 907 284 1051 0.0 1084
Msa0865360 MtrunA17_Chr1g0183311 59.293 877 286 9 98 907 10 882 0.0 1001
Msa0865360 MtrunA17_Chr5g0426961 67.089 711 207 4 216 905 129 833 0.0 977
Msa0865360 MtrunA17_Chr1g0211691 52.587 947 295 20 1 795 1 945 0.0 860
Msa0865360 MtrunA17_Chr5g0448301 82.704 503 86 1 316 817 129 631 0.0 854
Msa0865360 MtrunA17_Chr5g0448301 72.340 188 49 1 60 244 1 188 2.92e-70 246
Msa0865360 MtrunA17_Chr5g0420361 60.775 645 202 9 291 888 139 779 0.0 774
Msa0865360 MtrunA17_Chr6g0472441 56.109 663 205 12 291 900 81 710 0.0 711
Msa0865360 MtrunA17_Chr2g0289121 45.157 702 325 11 226 904 155 819 0.0 574
Msa0865360 MtrunA17_Chr4g0075261 42.585 735 327 12 227 904 168 864 0.0 571
Msa0865360 MtrunA17_Chr7g0275771 42.384 604 292 11 174 730 77 671 5.77e-148 463
Msa0865360 MtrunA17_Chr7g0275771 59.236 157 63 1 749 904 768 924 7.54e-54 203
Msa0865360 MtrunA17_Chr1g0192011 35.880 733 400 14 217 905 255 961 4.60e-143 452
Msa0865360 MtrunA17_Chr2g0289031 52.538 394 177 3 513 904 8 393 1.06e-130 400
Msa0865360 MtrunA17_Chr1g0147021 45.312 512 264 9 224 731 867 1366 1.34e-129 430
Msa0865360 MtrunA17_Chr1g0147021 66.176 136 46 0 760 895 1551 1686 1.38e-51 198
Msa0865360 MtrunA17_Chr2g0281051 33.510 755 416 14 227 903 207 953 6.76e-123 398
Msa0865360 MtrunA17_Chr4g0048531 34.551 602 292 15 393 910 699 1282 3.46e-100 342
Msa0865360 MtrunA17_Chr4g0048531 34.091 176 104 4 227 392 260 433 5.56e-25 112
Msa0865360 MtrunA17_Chr8g0364421 48.374 246 100 3 335 572 3 229 8.23e-67 223
Msa0865360 MtrunA17_Chr7g0231061 58.564 181 70 2 574 751 12 190 1.61e-60 205
Msa0865360 MtrunA17_Chr1g0211701 80.000 115 23 0 793 907 4 118 4.02e-58 196
Msa0865360 MtrunA17_Chr8g0361381 47.525 202 102 1 494 695 11 208 1.54e-53 186
Msa0865360 MtrunA17_Chr2g0289091 68.468 111 35 0 759 869 310 420 1.85e-44 167
Msa0865360 MtrunA17_Chr2g0289091 50.625 160 77 1 587 744 23 182 8.73e-43 162
Msa0865360 MtrunA17_Chr8g0361391 72.727 88 23 1 760 847 51 137 1.54e-37 138
Msa0865360 MtrunA17_Chr2g0289041 37.500 208 107 5 249 438 2 204 3.82e-36 135
Msa0865360 MtrunA17_Chr8g0364411 55.357 112 50 0 227 338 33 144 7.45e-35 130
Msa0865360 MtrunA17_Chr8g0340381 60.163 123 30 4 608 730 36 139 5.21e-32 123
Msa0865360 MtrunA17_Chr1g0211671 84.375 64 10 0 846 909 15 78 2.59e-30 116
Msa0865360 MtrunA17_Chr6g0469821 40.500 200 60 7 1 200 1 141 1.70e-19 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0865360 AT1G11950.1 47.429 700 322 11 227 904 193 868 0.0 631
Msa0865360 AT1G11950.3 47.429 700 322 11 227 904 193 868 0.0 631
Msa0865360 AT1G62310.1 46.880 689 330 9 227 893 209 883 0.0 613
Msa0865360 AT1G11950.2 45.972 633 296 11 227 837 193 801 6.93e-180 543
Msa0865360 AT3G07610.1 53.347 493 213 4 419 907 415 894 1.29e-168 520
Msa0865360 AT3G07610.1 33.775 302 183 4 120 405 32 332 1.36e-46 182
Msa0865360 AT3G07610.3 51.172 512 217 5 419 907 415 916 2.18e-160 499
Msa0865360 AT3G07610.3 33.775 302 183 4 120 405 32 332 1.55e-46 181
Msa0865360 AT4G00990.3 45.419 513 255 10 226 723 79 581 4.39e-134 422
Msa0865360 AT4G00990.3 62.105 95 36 0 759 853 684 778 1.52e-31 133
Msa0865360 AT4G00990.2 45.419 513 255 10 226 723 79 581 6.93e-134 422
Msa0865360 AT4G00990.2 66.667 87 29 0 759 845 684 770 4.29e-31 131
Msa0865360 AT4G00990.1 45.419 513 255 10 226 723 79 581 1.19e-133 423
Msa0865360 AT4G00990.1 60.274 146 58 0 759 904 684 829 8.19e-52 196
Msa0865360 AT1G09060.2 32.612 739 434 17 203 905 181 891 7.83e-117 381
Msa0865360 AT1G09060.1 32.612 739 434 17 203 905 181 891 7.83e-117 381
Msa0865360 AT1G09060.4 32.612 739 434 17 203 905 195 905 1.15e-116 381
Msa0865360 AT1G09060.3 32.612 739 434 17 203 905 195 905 1.15e-116 381
Msa0865360 AT4G21430.1 30.000 730 423 15 222 903 222 911 8.61e-97 327
Msa0865360 AT3G07610.2 54.064 283 123 2 419 701 415 690 6.80e-87 296
Msa0865360 AT3G07610.2 33.775 302 183 4 120 405 32 332 1.07e-46 180

Find 222 sgRNAs with CRISPR-Local

Find 418 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTAGATATTCCTTCAATT+TGG 0.122471 5_4:-65989805 None:intergenic
GGATTCCTCTGAACTTAATT+TGG 0.160479 5_4:-65986847 None:intergenic
GCCTCCTTCTGATTTATTTC+AGG 0.172247 5_4:+65988935 Msa0865360:CDS
ACATCGCTCTCATTCAATTT+AGG 0.222022 5_4:-65987119 None:intergenic
CTTATGTCTCAATTTCTTAA+TGG 0.241484 5_4:-65989631 None:intergenic
TGACATTCATTATCGGCTTT+TGG 0.263135 5_4:-65987886 None:intergenic
ATCCCAAAGAGCACCTTCTA+AGG 0.269470 5_4:-65989760 None:intergenic
GGATTTGTATATTCTTTATA+AGG 0.271748 5_4:-65988999 None:intergenic
ATCCCTTAGAAGGTGCTCTT+TGG 0.273656 5_4:+65989757 Msa0865360:CDS
CGTCAGGAATGGGTTCTTCT+TGG 0.274859 5_4:-65986269 None:intergenic
AGTACATTGCTGACAATTAC+AGG 0.278275 5_4:-65988198 None:intergenic
TTCTAAATACGATGAAGTTT+TGG 0.278404 5_4:+65988287 Msa0865360:CDS
CTCCGTGGTGGGAAGCTTCT+AGG 0.287089 5_4:+65987751 Msa0865360:CDS
CCCTCTTCTTACTTCCGATT+TGG 0.289772 5_4:-65992693 None:intergenic
GGAATGGGTTCTTCTTGGTC+TGG 0.294202 5_4:-65986264 None:intergenic
CCCTTACCATTTGTTCAAAC+AGG 0.304071 5_4:-65986952 None:intergenic
TCAGACCATTTATTTGACTA+TGG 0.310342 5_4:+65990154 Msa0865360:CDS
AATGCACGCCACATGACTTT+TGG 0.316385 5_4:-65988249 None:intergenic
TTTAGATATTCCTTCAATTT+GGG 0.317263 5_4:-65989804 None:intergenic
ACTAACTCGTAGATGCAATT+TGG 0.327466 5_4:-65987943 None:intergenic
TATGGATTTGCTCAGGATCT+TGG 0.334162 5_4:+65989104 Msa0865360:CDS
CAACCTTGCTGTGAAGTTGC+CGG 0.339593 5_4:+65989037 Msa0865360:CDS
CTAAAGATGCGCGTGTGTTC+TGG 0.341041 5_4:+65987561 Msa0865360:CDS
GAAACTGCGTCGTTGAATTT+CGG 0.343841 5_4:+65986444 Msa0865360:CDS
TCCCTTAGAAGGTGCTCTTT+GGG 0.346691 5_4:+65989758 Msa0865360:CDS
GTTGAATTTCGGTGAAAATT+CGG 0.348405 5_4:+65986455 Msa0865360:CDS
AACTTCATCGTATTTAGAAT+TGG 0.357620 5_4:-65988283 None:intergenic
ATATCATCGGCGTTACTAAC+TGG 0.357927 5_4:-65988048 None:intergenic
CATCTTTGTTCAACTCGATC+TGG 0.361993 5_4:-65992769 None:intergenic
GCATACCCTGTTTGAACAAA+TGG 0.372456 5_4:+65986946 Msa0865360:CDS
AAGAGGGAGCTACATGGTTA+TGG 0.374355 5_4:+65989669 Msa0865360:CDS
GTCGCAAGGATTGGCGCAAT+TGG 0.374765 5_4:+65988886 Msa0865360:CDS
TTCGGTTGAAGCTGGTGATA+TGG 0.377210 5_4:+65986473 Msa0865360:CDS
ACTCGTGAGTGGTCAAGATC+TGG 0.380477 5_4:+65987829 Msa0865360:CDS
ATGCTCCATAGTCAAATAAA+TGG 0.380895 5_4:-65990159 None:intergenic
TTGGCAGTTCTGTGATTTAT+CGG 0.388228 5_4:-65990847 None:intergenic
TTATTTGACTATGGAGCATA+AGG 0.388980 5_4:+65990163 Msa0865360:CDS
CTCAACTTCCTCATCGTTGT+TGG 0.391735 5_4:-65987322 None:intergenic
TAGAGGAGACTTGTGATAAT+TGG 0.397483 5_4:+65988010 Msa0865360:CDS
GTGAAACTCAAGGAGGAGTA+TGG 0.411308 5_4:+65990185 Msa0865360:CDS
TTCAATGGCACTGGAGCAAA+GGG 0.413215 5_4:+65988172 Msa0865360:CDS
TAAAGGAATACCTTGTATCT+TGG 0.414845 5_4:-65987427 None:intergenic
GATGGAGGGGATCCCTTAGA+AGG 0.417119 5_4:+65989747 Msa0865360:CDS
AATGTACTTGAATGTACATC+TGG 0.421952 5_4:+65988213 Msa0865360:CDS
TCCTTCTCTGAGCTCAGATT+CGG 0.424443 5_4:-65992721 None:intergenic
AGAGGGAGCTACATGGTTAT+GGG 0.424853 5_4:+65989670 Msa0865360:CDS
CTCCCGCGTTTCTTTCTCTC+CGG 0.425830 5_4:-65986759 None:intergenic
GAATGGGTTCTTCTTGGTCT+GGG 0.425933 5_4:-65986263 None:intergenic
ACAGATTTCTATACTGTCCT+AGG 0.426836 5_4:+65988115 Msa0865360:CDS
TTAATGGCAGTAATTTCCTT+AGG 0.427741 5_4:-65989615 None:intergenic
TCTTCCACATTTAAGACAGC+TGG 0.427894 5_4:+65987371 Msa0865360:CDS
AGGTTGAGAGAACCACTAAA+AGG 0.429360 5_4:-65989020 None:intergenic
TCAATGTAAAAGAAGTGATA+AGG 0.432873 5_4:+65986881 Msa0865360:CDS
ATTGAATAACGGTGAAGGTT+CGG 0.432919 5_4:+65986338 Msa0865360:CDS
GAATGTTGGCGCCGCTGAAA+CGG 0.433221 5_4:+65986311 Msa0865360:CDS
CTCTGTTTCATGTTGTTCAC+CGG 0.434267 5_4:-65992553 None:intergenic
CTTCTTCACGAACTTCCCTT+CGG 0.434931 5_4:-65992666 None:intergenic
ACTATAGGAAATGAAGAATA+AGG 0.436610 5_4:+65987293 Msa0865360:intron
TTTGTCTCTCCTGAACATAT+TGG 0.437752 5_4:+65990787 Msa0865360:CDS
GTGCGTTTGTGATGTGTTTG+TGG 0.444380 5_4:-65992495 None:intergenic
ACCATGATGACATTCATTAT+CGG 0.447505 5_4:-65987893 None:intergenic
AATGTACATCTGGTTTAAGC+TGG 0.447849 5_4:+65988223 Msa0865360:CDS
GTAGGAAGTGTTTCATCGTC+AGG 0.448296 5_4:-65986285 None:intergenic
TAAATGGTCTGATCATGAAT+GGG 0.451339 5_4:-65990143 None:intergenic
AGGCTCTTCATCATTTCAAC+CGG 0.452508 5_4:+65986740 Msa0865360:CDS
TTCAACGACGCAGTTTCAGC+AGG 0.454656 5_4:-65986438 None:intergenic
TTCCTCAGTTAAAGCTGCTA+TGG 0.461163 5_4:+65986608 Msa0865360:CDS
AATATCCACCAATTCTTCAC+TGG 0.461911 5_4:+65988852 Msa0865360:CDS
GCTGTTGACGGACGATGAAA+TGG 0.463517 5_4:+65986572 Msa0865360:CDS
GAAGTATCCTTCTCAGTTCA+AGG 0.464781 5_4:-65987918 None:intergenic
GTTGTTAGTGAGCAGAATAA+AGG 0.465943 5_4:+65986695 Msa0865360:CDS
TTACCTTCAGATTTCTGACT+TGG 0.467821 5_4:-65990362 None:intergenic
ATAAATGGTCTGATCATGAA+TGG 0.468212 5_4:-65990144 None:intergenic
AGTGTTTCATCGTCAGGAAT+GGG 0.468408 5_4:-65986279 None:intergenic
CACCGGCTTTGAAACGGAGC+TGG 0.470962 5_4:-65992536 None:intergenic
ACACAAGGGGTCGCAAGGAT+TGG 0.472118 5_4:+65988877 Msa0865360:CDS
TCTTTCAATTTCAACACCTC+AGG 0.472947 5_4:-65988909 None:intergenic
TGTGTTATTGTGTATATCAT+CGG 0.479496 5_4:-65988061 None:intergenic
AGCACCTTGAGCAAGATAAG+AGG 0.480011 5_4:+65989652 Msa0865360:CDS
TTAAGTTTCTTGTGGACTTG+TGG 0.481350 5_4:-65986822 None:intergenic
TATTGCTTATGGATTTGCTC+AGG 0.482748 5_4:+65989097 Msa0865360:CDS
ATTTGGTATTAAGTTTCTTG+TGG 0.482774 5_4:-65986830 None:intergenic
CAACAGCGACTCCACCGTAT+TGG 0.485762 5_4:-65986556 None:intergenic
AAGTGTTTCATCGTCAGGAA+TGG 0.488943 5_4:-65986280 None:intergenic
CACTAATGATAGTGACCTGC+TGG 0.495256 5_4:+65989725 Msa0865360:CDS
GTTGTTCACCGGCTTTGAAA+CGG 0.495272 5_4:-65992542 None:intergenic
GGTGAAAATTCGGTTGAAGC+TGG 0.495633 5_4:+65986465 Msa0865360:CDS
TTGTGTAACCAGTGAAGAAT+TGG 0.496636 5_4:-65988860 None:intergenic
ATCCAGCTCCGTTTCAAAGC+CGG 0.496642 5_4:+65992534 Msa0865360:CDS
TACGGTGGAGTCGCTGTTGA+CGG 0.498655 5_4:+65986560 Msa0865360:CDS
CGTGAAGAAGAAAACCAAAT+CGG 0.501800 5_4:+65992679 Msa0865360:CDS
CGGACGATGAAATGGCAGCT+AGG 0.502074 5_4:+65986580 Msa0865360:CDS
GTAAAAGAAGTGATAAGGGC+AGG 0.502632 5_4:+65986886 Msa0865360:CDS
AAATACCTCAAACTTGTCCT+TGG 0.506309 5_4:-65990866 None:intergenic
CAATGTAAAAGAAGTGATAA+GGG 0.506714 5_4:+65986882 Msa0865360:CDS
AGGTGTTGAAATTGAAAGAT+TGG 0.508050 5_4:+65988913 Msa0865360:CDS
TCAGGCTTTAAACAATAATC+CGG 0.508635 5_4:-65989056 None:intergenic
GGACGATGAAATGGCAGCTA+GGG 0.509416 5_4:+65986581 Msa0865360:CDS
AGATCTGGGTGGCATGCAAA+TGG 0.510153 5_4:+65987844 Msa0865360:CDS
AAGCACTCACCAATATGTTC+AGG 0.510499 5_4:-65990796 None:intergenic
GAGAAAGAGAAAAGCGGAGA+AGG 0.511730 5_4:+65986779 Msa0865360:CDS
TTTCAATGGCACTGGAGCAA+AGG 0.515097 5_4:+65988171 Msa0865360:CDS
AGGCTGTTAATTGCATAGAT+TGG 0.519223 5_4:+65988316 Msa0865360:CDS
ACACTTCCTACTTTGAATGT+TGG 0.519974 5_4:+65986297 Msa0865360:CDS
TGTATATTCTTTATAAGGCA+AGG 0.521531 5_4:-65988994 None:intergenic
GACTTGTAGGAGTCGAACCT+TGG 0.524135 5_4:+65990286 Msa0865360:intron
AGAAGATGTACCCAAATTGA+AGG 0.524585 5_4:+65989794 Msa0865360:CDS
ACCAAATCGGAAGTAAGAAG+AGG 0.524854 5_4:+65992692 Msa0865360:CDS
CTCGTGAGTGGTCAAGATCT+GGG 0.525734 5_4:+65987830 Msa0865360:CDS
TTGCTCAGGATCTTGGACAC+GGG 0.529109 5_4:+65989111 Msa0865360:CDS
TATGAATCTTGGTGCCAATA+CGG 0.529389 5_4:+65986542 Msa0865360:CDS
TGAAGAACAAATGATTGAGA+AGG 0.530667 5_4:+65987395 Msa0865360:CDS
ATGGTTTCCTTGAACTGAGA+AGG 0.533086 5_4:+65987911 Msa0865360:CDS
ACAGCACACAGGACATGCTT+CGG 0.536929 5_4:-65987144 None:intergenic
CCTTACCATTTGTTCAAACA+GGG 0.538038 5_4:-65986951 None:intergenic
TTGAAATGATGAAGAGCCTC+CGG 0.538715 5_4:-65986736 None:intergenic
GAGAGAGAAGCCAAGATACA+AGG 0.541191 5_4:+65987417 Msa0865360:CDS
GCCGATAATGAATGTCATCA+TGG 0.542022 5_4:+65987892 Msa0865360:CDS
GCTCCCTCTTATCTTGCTCA+AGG 0.544578 5_4:-65989656 None:intergenic
TAAGATGCACAAAATGCAAA+CGG 0.545481 5_4:+65986913 Msa0865360:CDS
AACAGATTCTTCTGCTACTG+CGG 0.546201 5_4:-65986499 None:intergenic
GGTGAAGGTTCGGTTGAAGC+TGG 0.546251 5_4:+65986348 Msa0865360:CDS
GAAGAAAGAGACGTGGTAGC+CGG 0.548621 5_4:+65986717 Msa0865360:CDS
TTCTCTAAGTATATGTTGAA+AGG 0.550555 5_4:+65987345 Msa0865360:CDS
AGGGATCCCCTCCATCCAGC+AGG 0.550787 5_4:-65989740 None:intergenic
CAATTGCAGTCCTTTAAAGC+AGG 0.553168 5_4:+65989854 Msa0865360:CDS
GCACCTTGAGCAAGATAAGA+GGG 0.553810 5_4:+65989653 Msa0865360:CDS
AACTGCCAAGGACAAGTTTG+AGG 0.556463 5_4:+65990861 Msa0865360:CDS
GAAGGAATCCACCGAAAATG+AGG 0.556975 5_4:+65986797 Msa0865360:CDS
GAAAATGTCTTAAATCTCCA+TGG 0.559521 5_4:-65988152 None:intergenic
AACTCGTAGATGCAATTTGG+AGG 0.560242 5_4:-65987940 None:intergenic
TGTTGTTGCGAGCTCCGTGG+TGG 0.562600 5_4:+65987739 Msa0865360:CDS
TTCAGATTTCTGACTTGGTG+AGG 0.565040 5_4:-65990357 None:intergenic
TCATCCAGCTGTCTTAAATG+TGG 0.565195 5_4:-65987375 None:intergenic
GTTGTTGCGAGCTCCGTGGT+GGG 0.565282 5_4:+65987740 Msa0865360:CDS
GCTACATGGTTATGGGGAGG+CGG 0.565580 5_4:+65989677 Msa0865360:CDS
ATGTACATCTGGTTTAAGCT+GGG 0.567172 5_4:+65988224 Msa0865360:CDS
GTTGACGCATATCGCTAAAG+TGG 0.567629 5_4:+65989584 Msa0865360:CDS
TATTGTTTAAAGCCTGACAT+GGG 0.567740 5_4:+65989062 Msa0865360:CDS
ACTTGGTGAGGCAAACCAGC+GGG 0.568266 5_4:-65990345 None:intergenic
TAAAGTGGAACTGAAACCTA+AGG 0.569692 5_4:+65989599 Msa0865360:CDS
AACAGACTCTTCTGTTTCTG+CGG 0.571229 5_4:-65986382 None:intergenic
TGGTGTAGATCTACAGCCCT+AGG 0.571725 5_4:-65988132 None:intergenic
TTCTTCACTGGTTACACAAG+GGG 0.572201 5_4:+65988864 Msa0865360:CDS
TTTACATTGATGGCACGCTA+AGG 0.575795 5_4:-65986868 None:intergenic
TTATTGTTTAAAGCCTGACA+TGG 0.576650 5_4:+65989061 Msa0865360:CDS
TCCCAAAGAGCACCTTCTAA+GGG 0.579367 5_4:-65989759 None:intergenic
CAAGATAAGAGGGAGCTACA+TGG 0.579862 5_4:+65989663 Msa0865360:CDS
CGTTCCTGAAATAAATCAGA+AGG 0.580684 5_4:-65988939 None:intergenic
TGTAACCAGTGAAGAATTGG+TGG 0.581894 5_4:-65988857 None:intergenic
TGGTTACACAAGGGGTCGCA+AGG 0.582867 5_4:+65988872 Msa0865360:CDS
ATTTAAGCTTCAAGATGTAG+AGG 0.583091 5_4:+65987993 Msa0865360:CDS
CTCCATAGCAGCTTTAACTG+AGG 0.586676 5_4:-65986610 None:intergenic
AGAAATTCAGAAGAGGAAGA+TGG 0.587534 5_4:+65986662 Msa0865360:CDS
CAACCACATTTCAATGGCGG+AGG 0.588641 5_4:+65986185 None:intergenic
GCGGCGCCAACATTCAAAGT+AGG 0.589375 5_4:-65986303 None:intergenic
ATAGTGACCTGCTGGATGGA+GGG 0.590525 5_4:+65989733 Msa0865360:CDS
ACCGAATCTGAGCTCAGAGA+AGG 0.591441 5_4:+65992720 Msa0865360:CDS
CCAAATCGGAAGTAAGAAGA+GGG 0.594182 5_4:+65992693 Msa0865360:CDS
AGCTTCTGAATAAAAGTCCA+AGG 0.594960 5_4:-65990303 None:intergenic
TAAAAGAAGTGATAAGGGCA+GGG 0.596770 5_4:+65986887 Msa0865360:CDS
TAATACCAAATTAAGTTCAG+AGG 0.597446 5_4:+65986842 Msa0865360:CDS
ATTCAATGACGCCGTTTCAG+CGG 0.599511 5_4:-65986322 None:intergenic
TGTGATTTATCGGAAGCTTG+CGG 0.600229 5_4:-65990837 None:intergenic
GAAACGGCGTCATTGAATAA+CGG 0.603965 5_4:+65986327 Msa0865360:CDS
CACCTAGAAGCTTCCCACCA+CGG 0.608942 5_4:-65987753 None:intergenic
GGAGCATAAGGTGAAACTCA+AGG 0.610104 5_4:+65990175 Msa0865360:CDS
AATGATAGTGACCTGCTGGA+TGG 0.614766 5_4:+65989729 Msa0865360:CDS
GATAGTGACCTGCTGGATGG+AGG 0.617492 5_4:+65989732 Msa0865360:CDS
CAGATTTCTATACTGTCCTA+GGG 0.617894 5_4:+65988116 Msa0865360:CDS
TTTGCTCAGGATCTTGGACA+CGG 0.618370 5_4:+65989110 Msa0865360:CDS
TCAACGACGCAGTTTCAGCA+GGG 0.618616 5_4:-65986437 None:intergenic
CGCAACAACAGAGGAGACAA+AGG 0.621015 5_4:-65987726 None:intergenic
AACCGGAGAGAAAGAAACGC+GGG 0.621363 5_4:+65986757 Msa0865360:CDS
AATTCTTCACTGGTTACACA+AGG 0.621883 5_4:+65988862 Msa0865360:CDS
AACGCTAAATATAAAACCGA+CGG 0.624633 5_4:+65987532 Msa0865360:CDS
TCGATCTGGATGATGTGTGA+TGG 0.633836 5_4:-65992755 None:intergenic
ATAACAAACAGTCAAGCCGA+AGG 0.634502 5_4:+65992650 Msa0865360:intron
CACGGAGCTCGCAACAACAG+AGG 0.634726 5_4:-65987735 None:intergenic
TATACACAATAACACAAGGA+AGG 0.636388 5_4:+65988068 Msa0865360:CDS
ACGAGTCTACGACTCGTGAG+TGG 0.637239 5_4:+65987818 Msa0865360:CDS
TTCGGTTGAAGCTGGTGATG+TGG 0.638000 5_4:+65986356 Msa0865360:CDS
TAACAAACAGTCAAGCCGAA+GGG 0.639808 5_4:+65992651 Msa0865360:intron
TCACCAAGTCAGAAATCTGA+AGG 0.640211 5_4:+65990359 Msa0865360:CDS
TGCTCAGGATCTTGGACACG+GGG 0.642566 5_4:+65989112 Msa0865360:CDS
CTGTATCAAACACATTACAA+TGG 0.650081 5_4:-65989151 None:intergenic
CTCTGTTGTTGCGAGCTCCG+TGG 0.650643 5_4:+65987736 Msa0865360:CDS
GACTTGGTGAGGCAAACCAG+CGG 0.651120 5_4:-65990346 None:intergenic
TCCTGAAATAAATCAGAAGG+AGG 0.651303 5_4:-65988936 None:intergenic
GGGTGGCATGCAAATGGCGA+TGG 0.651622 5_4:+65987850 Msa0865360:CDS
GCGTCATTGAATAACGGTGA+AGG 0.653749 5_4:+65986333 Msa0865360:CDS
ATTGTTTAAAGCCTGACATG+GGG 0.653779 5_4:+65989063 Msa0865360:CDS
GATAAATCACAGAACTGCCA+AGG 0.654153 5_4:+65990849 Msa0865360:CDS
CGTGGTGGGAAGCTTCTAGG+TGG 0.658159 5_4:+65987754 Msa0865360:CDS
GGAGCTACATGGTTATGGGG+AGG 0.658801 5_4:+65989674 Msa0865360:CDS
GAATCTTGGTGCCAATACGG+TGG 0.660922 5_4:+65986545 Msa0865360:CDS
GAAAGAGACGTGGTAGCCGG+AGG 0.662313 5_4:+65986720 Msa0865360:CDS
TGAGTGCTTTCGTTTGACAG+AGG 0.664857 5_4:+65990810 Msa0865360:CDS
AATCCGGCAACTTCACAGCA+AGG 0.666731 5_4:-65989040 None:intergenic
ATTCTTCACTGGTTACACAA+GGG 0.667170 5_4:+65988863 Msa0865360:CDS
ACGCGGGAGAAAGAGAAAAG+CGG 0.667642 5_4:+65986773 Msa0865360:CDS
AAATGGTCTGATCATGAATG+GGG 0.669524 5_4:-65990142 None:intergenic
TAGTGACCTGCTGGATGGAG+GGG 0.670026 5_4:+65989734 Msa0865360:CDS
GAGGGAGCTACATGGTTATG+GGG 0.674948 5_4:+65989671 Msa0865360:CDS
GGATTGGCGCAATTGGCCTG+AGG 0.678244 5_4:+65988893 Msa0865360:CDS
GCTGGGAACCAAAAGTCATG+TGG 0.680165 5_4:+65988241 Msa0865360:CDS
GGTCGAAACCAACAACGATG+AGG 0.694012 5_4:+65987314 Msa0865360:CDS
CGGTGAACAACATGAAACAG+AGG 0.698370 5_4:+65992554 Msa0865360:CDS
AGAGGAGACAAAGGTCAAAG+CGG 0.698562 5_4:-65987717 None:intergenic
CGAGTATGTATCACTGACTG+AGG 0.704840 5_4:+65987795 Msa0865360:CDS
GCATCTTTAGAATAATCCGT+CGG 0.705003 5_4:-65987548 None:intergenic
CAACCGGAGAGAAAGAAACG+CGG 0.707826 5_4:+65986756 Msa0865360:CDS
ATGATATACACAATAACACA+AGG 0.707929 5_4:+65988064 Msa0865360:CDS
TAATTGCATAGATTGGTGTG+AGG 0.719281 5_4:+65988323 Msa0865360:CDS
AGGGCTGTAGATCTACACCA+TGG 0.725512 5_4:+65988135 Msa0865360:CDS
AATAAAGGAAGAAAGAGACG+TGG 0.731452 5_4:+65986710 Msa0865360:CDS
GCTATGGAGATAATGAAACA+CGG 0.732451 5_4:+65986624 Msa0865360:CDS
ATGAACTCAGCATTATGACG+AGG 0.733159 5_4:-65988966 None:intergenic
TTACAATTATCACAGCACAC+AGG 0.736282 5_4:-65987155 None:intergenic
TCAATGGCACTGGAGCAAAG+GGG 0.769506 5_4:+65988173 Msa0865360:CDS
GCATAAGGTGAAACTCAAGG+AGG 0.774009 5_4:+65990178 Msa0865360:CDS
GTGAGTGGTCAAGATCTGGG+TGG 0.774532 5_4:+65987833 Msa0865360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCATTTTATAATTTGATTT+TGG + chr5_4:65987482-65987501 Msa0865360:intron 10.0%
!!! TCATTTTATAATTTGATTTT+GGG + chr5_4:65987483-65987502 Msa0865360:intron 10.0%
!! TAGTATTTATAAATATTTCT+TGG + chr5_4:65990212-65990231 Msa0865360:intron 10.0%
!!! TGATATTAACTATGTTTTTT+TGG + chr5_4:65987077-65987096 Msa0865360:intron 15.0%
!! ATTTCTAAATTTATGATGAA+GGG + chr5_4:65988354-65988373 Msa0865360:intron 15.0%
!!! TGTAATCTTATCTTTTAAAT+TGG + chr5_4:65988621-65988640 Msa0865360:intron 15.0%
!! AAAAAACTCAAATAATTAAG+AGG - chr5_4:65989213-65989232 None:intergenic 15.0%
!! ATAATAACAGTAAAAACTTT+CGG - chr5_4:65989250-65989269 None:intergenic 15.0%
!! TAACATAATCCATAAATAAT+AGG + chr5_4:65989951-65989970 Msa0865360:intron 15.0%
!! AAATTAACACCTATTATTTA+TGG - chr5_4:65989963-65989982 None:intergenic 15.0%
!!! GATTTTAATAAAGAAAATGA+TGG + chr5_4:65990558-65990577 Msa0865360:intron 15.0%
!! ATGAAAATAACTAAGTAATA+TGG + chr5_4:65990974-65990993 Msa0865360:intron 15.0%
!!! AATATTTTAGTTTATCTCAT+AGG - chr5_4:65991038-65991057 None:intergenic 15.0%
!!! TTTAAAATATGGACAAAAAT+GGG - chr5_4:65991470-65991489 None:intergenic 15.0%
!!! TTTTAAAATATGGACAAAAA+TGG - chr5_4:65991471-65991490 None:intergenic 15.0%
!!! TTTTTGTCCATATTTTAAAA+CGG + chr5_4:65991471-65991490 Msa0865360:intron 15.0%
!! GAAAAATAGTTAATCTAGAA+GGG - chr5_4:65987230-65987249 None:intergenic 20.0%
!! AGAAAAATAGTTAATCTAGA+AGG - chr5_4:65987231-65987250 None:intergenic 20.0%
!!! ATTTAGAATTGGTTTTTTGA+CGG - chr5_4:65988275-65988294 None:intergenic 20.0%
!! GATTTCTAAATTTATGATGA+AGG + chr5_4:65988353-65988372 Msa0865360:intron 20.0%
!! TTTCTAAATTTATGATGAAG+GGG + chr5_4:65988355-65988374 Msa0865360:intron 20.0%
!! CCAATTACACTAAAAAAAAT+TGG - chr5_4:65988504-65988523 None:intergenic 20.0%
!!! CCAATTTTTTTTAGTGTAAT+TGG + chr5_4:65988501-65988520 Msa0865360:intron 20.0%
!! GGATTTGTATATTCTTTATA+AGG - chr5_4:65989002-65989021 None:intergenic 20.0%
!!! TAATTTCATAGTTTGATTTG+TGG + chr5_4:65989426-65989445 Msa0865360:intron 20.0%
!!! ATAAACTGCAAAGTATATTT+TGG + chr5_4:65989499-65989518 Msa0865360:intron 20.0%
!! TTTAGATATTCCTTCAATTT+GGG - chr5_4:65989807-65989826 None:intergenic 20.0%
!!! ATTTTTTTACATTGACTTGT+AGG + chr5_4:65990273-65990292 Msa0865360:intron 20.0%
!!! TTCTGCTTTTTCTATTTATA+AGG + chr5_4:65990911-65990930 Msa0865360:intron 20.0%
!! TTGAAAAATTAGAGAAAGAA+AGG + chr5_4:65991372-65991391 Msa0865360:CDS 20.0%
!!! TTCGATAAATAAACCTTTTT+AGG + chr5_4:65991673-65991692 Msa0865360:intron 20.0%
! ATTTGGTATTAAGTTTCTTG+TGG - chr5_4:65986833-65986852 None:intergenic 25.0%
! TAATACCAAATTAAGTTCAG+AGG + chr5_4:65986842-65986861 Msa0865360:CDS 25.0%
!! TATCACTTCTTTTACATTGA+TGG - chr5_4:65986881-65986900 None:intergenic 25.0%
! TCAATGTAAAAGAAGTGATA+AGG + chr5_4:65986881-65986900 Msa0865360:CDS 25.0%
! CAATGTAAAAGAAGTGATAA+GGG + chr5_4:65986882-65986901 Msa0865360:CDS 25.0%
!! AAGATTACATGTTTCGATTT+TGG + chr5_4:65987042-65987061 Msa0865360:intron 25.0%
!! TCTTTTAAACTCATCAATGT+CGG + chr5_4:65987197-65987216 Msa0865360:intron 25.0%
!!! ATTTTTGAAATGTATCCATC+TGG + chr5_4:65987267-65987286 Msa0865360:intron 25.0%
! ACTATAGGAAATGAAGAATA+AGG + chr5_4:65987293-65987312 Msa0865360:intron 25.0%
! TTCTCTAAGTATATGTTGAA+AGG + chr5_4:65987345-65987364 Msa0865360:CDS 25.0%
! AAAATGATCTCTGACTATAA+AGG - chr5_4:65987447-65987466 None:intergenic 25.0%
!! TGTGTTATTGTGTATATCAT+CGG - chr5_4:65988064-65988083 None:intergenic 25.0%
! ATGATATACACAATAACACA+AGG + chr5_4:65988064-65988083 Msa0865360:CDS 25.0%
!!! GAGATTTAAGACATTTTCAA+TGG + chr5_4:65988157-65988176 Msa0865360:CDS 25.0%
!! AACTTCATCGTATTTAGAAT+TGG - chr5_4:65988286-65988305 None:intergenic 25.0%
!! TTCTAAATACGATGAAGTTT+TGG + chr5_4:65988287-65988306 Msa0865360:CDS 25.0%
!!! AATCTAAATTTTAAGAACGC+TGG - chr5_4:65988439-65988458 None:intergenic 25.0%
! GACTATCAAGTAAACAAATT+GGG - chr5_4:65988671-65988690 None:intergenic 25.0%
! TGACTATCAAGTAAACAAAT+TGG - chr5_4:65988672-65988691 None:intergenic 25.0%
! GCAAATTTGGATAAATAATC+AGG - chr5_4:65988701-65988720 None:intergenic 25.0%
! TAGAATAGACTATCAAGTAA+AGG - chr5_4:65988776-65988795 None:intergenic 25.0%
!! TTACTTGATAGTCTATTCTA+TGG + chr5_4:65988776-65988795 Msa0865360:intron 25.0%
! TGTATATTCTTTATAAGGCA+AGG - chr5_4:65988997-65989016 None:intergenic 25.0%
!! GAATATACAAATCCTTTTAG+TGG + chr5_4:65989008-65989027 Msa0865360:CDS 25.0%
!! CCATAAGCAATATATGTTTT+TGG - chr5_4:65989089-65989108 None:intergenic 25.0%
! CCAAAAACATATATTGCTTA+TGG + chr5_4:65989086-65989105 Msa0865360:CDS 25.0%
! CAAATTACAAAGAATTGATC+AGG - chr5_4:65989548-65989567 None:intergenic 25.0%
! CTGATCAATTCTTTGTAATT+TGG + chr5_4:65989546-65989565 Msa0865360:intron 25.0%
! TTCTTTGTAATTTGGCTATA+AGG + chr5_4:65989554-65989573 Msa0865360:intron 25.0%
! CTTATGTCTCAATTTCTTAA+TGG - chr5_4:65989634-65989653 None:intergenic 25.0%
! CTTTAGATATTCCTTCAATT+TGG - chr5_4:65989808-65989827 None:intergenic 25.0%
!!! AGGTGTTAATTTTCTGAAAA+TGG + chr5_4:65989971-65989990 Msa0865360:intron 25.0%
! GAAGGAAAATATTAAACATG+TGG - chr5_4:65990095-65990114 None:intergenic 25.0%
!! ATATTTTCCTTCTACAACTT+TGG + chr5_4:65990103-65990122 Msa0865360:intron 25.0%
!!! AAGGTCTGTAAATTTTTTCT+TGG + chr5_4:65990429-65990448 Msa0865360:intron 25.0%
!!! GTTTTAACTCTCTTATTGTT+GGG - chr5_4:65990507-65990526 None:intergenic 25.0%
!!! TGTTTTAACTCTCTTATTGT+TGG - chr5_4:65990508-65990527 None:intergenic 25.0%
!!! ATGGCTTCTAAAATTGAATT+TGG + chr5_4:65990577-65990596 Msa0865360:intron 25.0%
! AACAATTTGCAAGAAATCAT+AGG - chr5_4:65990637-65990656 None:intergenic 25.0%
! TTTCATATATTCTCACATAC+CGG + chr5_4:65991089-65991108 Msa0865360:intron 25.0%
! ATAAGAAATTCTTGACATGA+TGG - chr5_4:65991267-65991286 None:intergenic 25.0%
!!! AATTGAGCCGTTTTAAAATA+TGG - chr5_4:65991481-65991500 None:intergenic 25.0%
! CAAAAGGAATTTACCTAAAA+AGG - chr5_4:65991689-65991708 None:intergenic 25.0%
!! ATTGGTTTAGATCTTCATTT+GGG - chr5_4:65992133-65992152 None:intergenic 25.0%
! TGAATTGAATCGTAAAAGAT+GGG - chr5_4:65992207-65992226 None:intergenic 25.0%
! ATGAATTGAATCGTAAAAGA+TGG - chr5_4:65992208-65992227 None:intergenic 25.0%
!! ATAATTGTTGATTGTGTTTC+TGG - chr5_4:65992419-65992438 None:intergenic 25.0%
!!! ATAGCTTGTTTTTCTCTATC+AGG - chr5_4:65986408-65986427 None:intergenic 30.0%
AGAGAAAAACAAGCTATGAA+TGG + chr5_4:65986411-65986430 Msa0865360:CDS 30.0%
GTTGAATTTCGGTGAAAATT+CGG + chr5_4:65986455-65986474 Msa0865360:CDS 30.0%
GAAAAACAAGCTATGAATCT+TGG + chr5_4:65986531-65986550 Msa0865360:CDS 30.0%
TAAGATGCACAAAATGCAAA+CGG + chr5_4:65986913-65986932 Msa0865360:CDS 30.0%
!!! TTTTTGGTTGTGTCTTGTTA+AGG + chr5_4:65987093-65987112 Msa0865360:intron 30.0%
ATTTCCTATAGTAAACCAGA+TGG - chr5_4:65987285-65987304 None:intergenic 30.0%
TGAAGAACAAATGATTGAGA+AGG + chr5_4:65987395-65987414 Msa0865360:CDS 30.0%
TAAAGGAATACCTTGTATCT+TGG - chr5_4:65987430-65987449 None:intergenic 30.0%
!! GATTTTGGGAAGTGAATTAT+AGG + chr5_4:65987497-65987516 Msa0865360:intron 30.0%
AACGCTAAATATAAAACCGA+CGG + chr5_4:65987532-65987551 Msa0865360:CDS 30.0%
ACCATGATGACATTCATTAT+CGG - chr5_4:65987896-65987915 None:intergenic 30.0%
ATTTAAGCTTCAAGATGTAG+AGG + chr5_4:65987993-65988012 Msa0865360:CDS 30.0%
TATACACAATAACACAAGGA+AGG + chr5_4:65988068-65988087 Msa0865360:CDS 30.0%
GAAAATGTCTTAAATCTCCA+TGG - chr5_4:65988155-65988174 None:intergenic 30.0%
AATGTACTTGAATGTACATC+TGG + chr5_4:65988213-65988232 Msa0865360:CDS 30.0%
!! CACTAAAAAAAATTGGCTTG+AGG - chr5_4:65988497-65988516 None:intergenic 30.0%
TTAGTGTAATTGGCATATGT+TGG + chr5_4:65988511-65988530 Msa0865360:intron 30.0%
CAAATTTGCCTAACATTCTT+GGG + chr5_4:65988712-65988731 Msa0865360:intron 30.0%
!! AGGTGTTGAAATTGAAAGAT+TGG + chr5_4:65988913-65988932 Msa0865360:CDS 30.0%
!! TCAGGCTTTAAACAATAATC+CGG - chr5_4:65989059-65989078 None:intergenic 30.0%
! TTATTGTTTAAAGCCTGACA+TGG + chr5_4:65989061-65989080 Msa0865360:CDS 30.0%
! TATTGTTTAAAGCCTGACAT+GGG + chr5_4:65989062-65989081 Msa0865360:CDS 30.0%
CTGTATCAAACACATTACAA+TGG - chr5_4:65989154-65989173 None:intergenic 30.0%
!!! TAGTTTGATTTGTGGTGTTT+TGG + chr5_4:65989434-65989453 Msa0865360:intron 30.0%
TTAATGGCAGTAATTTCCTT+AGG - chr5_4:65989618-65989637 None:intergenic 30.0%
!!! TTTTCCATTATCTAGCTCTA+CGG + chr5_4:65989895-65989914 Msa0865360:intron 30.0%
TAAATGGTCTGATCATGAAT+GGG - chr5_4:65990146-65990165 None:intergenic 30.0%
ATAAATGGTCTGATCATGAA+TGG - chr5_4:65990147-65990166 None:intergenic 30.0%
TCAGACCATTTATTTGACTA+TGG + chr5_4:65990154-65990173 Msa0865360:CDS 30.0%
ATGCTCCATAGTCAAATAAA+TGG - chr5_4:65990162-65990181 None:intergenic 30.0%
TTATTTGACTATGGAGCATA+AGG + chr5_4:65990163-65990182 Msa0865360:CDS 30.0%
TGTTTGCCATGAAGAATATA+AGG + chr5_4:65990410-65990429 Msa0865360:intron 30.0%
TACAGACCTTATATTCTTCA+TGG - chr5_4:65990419-65990438 None:intergenic 30.0%
AAAAGTGAGTTTGTGATGTA+TGG - chr5_4:65990664-65990683 None:intergenic 30.0%
!! CACAAACTCACTTTTATTTC+AGG + chr5_4:65990669-65990688 Msa0865360:intron 30.0%
ACTCTTAATCTGCATTGAAT+AGG + chr5_4:65990941-65990960 Msa0865360:intron 30.0%
!! CATAGGATTAGTTTCTTACT+TGG - chr5_4:65991021-65991040 None:intergenic 30.0%
ATGATTTCATACATTCAACG+AGG - chr5_4:65991201-65991220 None:intergenic 30.0%
!!! TATGTACTGTTTTTACCTGA+TGG + chr5_4:65991295-65991314 Msa0865360:intron 30.0%
AGTTTAGTCATACGAACAAA+AGG - chr5_4:65991705-65991724 None:intergenic 30.0%
! TCCACTTGTTACATTGTTAT+TGG + chr5_4:65991934-65991953 Msa0865360:intron 30.0%
ACCAATAACAATGTAACAAG+TGG - chr5_4:65991938-65991957 None:intergenic 30.0%
TTTCTCTCCAAGTTTCATTA+AGG + chr5_4:65991982-65992001 Msa0865360:intron 30.0%
TTCTCTCCAAGTTTCATTAA+GGG + chr5_4:65991983-65992002 Msa0865360:intron 30.0%
TTCATTCCATTTAACCTAGT+TGG + chr5_4:65992025-65992044 Msa0865360:intron 30.0%
AGGAAACACAAATTCCAAAA+CGG + chr5_4:65992102-65992121 Msa0865360:intron 30.0%
!! GATTGGTTTAGATCTTCATT+TGG - chr5_4:65992134-65992153 None:intergenic 30.0%
GAGAAAAATTCAAGGAAGAT+TGG - chr5_4:65992151-65992170 None:intergenic 30.0%
GTGTTCTTGAGAAAAATTCA+AGG - chr5_4:65992159-65992178 None:intergenic 30.0%
GAATTGTAAGAGAGAGAAAT+GGG - chr5_4:65992317-65992336 None:intergenic 30.0%
AGAATTGTAAGAGAGAGAAA+TGG - chr5_4:65992318-65992337 None:intergenic 30.0%
ATTTCTCTCTCTTACAATTC+TGG + chr5_4:65992317-65992336 Msa0865360:intron 30.0%
!!! GATTGTGTTTCTGGAAATTT+TGG - chr5_4:65992410-65992429 None:intergenic 30.0%
! ATTGATGGTTTGATGAATGA+AGG - chr5_4:65992451-65992470 None:intergenic 30.0%
!! TTGTGGAATTGATTTGTATC+TGG - chr5_4:65992481-65992500 None:intergenic 30.0%
ACACTTCCTACTTTGAATGT+TGG + chr5_4:65986297-65986316 Msa0865360:CDS 35.0%
ATTGAATAACGGTGAAGGTT+CGG + chr5_4:65986338-65986357 Msa0865360:CDS 35.0%
GAAAAACAAGCTATGAATGG+TGG + chr5_4:65986414-65986433 Msa0865360:CDS 35.0%
!!! ATAGCTTGTTTTTCTCGATC+AGG - chr5_4:65986525-65986544 None:intergenic 35.0%
!! TATGAATCTTGGTGCCAATA+CGG + chr5_4:65986542-65986561 Msa0865360:CDS 35.0%
GCTATGGAGATAATGAAACA+CGG + chr5_4:65986624-65986643 Msa0865360:CDS 35.0%
! GTTTTGCAGAAATTCAGAAG+AGG + chr5_4:65986655-65986674 Msa0865360:CDS 35.0%
AGAAATTCAGAAGAGGAAGA+TGG + chr5_4:65986662-65986681 Msa0865360:CDS 35.0%
GTTGTTAGTGAGCAGAATAA+AGG + chr5_4:65986695-65986714 Msa0865360:CDS 35.0%
AATAAAGGAAGAAAGAGACG+TGG + chr5_4:65986710-65986729 Msa0865360:CDS 35.0%
TTAAGTTTCTTGTGGACTTG+TGG - chr5_4:65986825-65986844 None:intergenic 35.0%
GGATTCCTCTGAACTTAATT+TGG - chr5_4:65986850-65986869 None:intergenic 35.0%
TAAAAGAAGTGATAAGGGCA+GGG + chr5_4:65986887-65986906 Msa0865360:CDS 35.0%
CCTTACCATTTGTTCAAACA+GGG - chr5_4:65986954-65986973 None:intergenic 35.0%
CCTGTTTGAACAAATGGTAA+GGG + chr5_4:65986952-65986971 Msa0865360:intron 35.0%
CTGTTTGAACAAATGGTAAG+GGG + chr5_4:65986953-65986972 Msa0865360:intron 35.0%
TAACTCGCTTCATATTGTGT+TGG + chr5_4:65987005-65987024 Msa0865360:intron 35.0%
ACATCGCTCTCATTCAATTT+AGG - chr5_4:65987122-65987141 None:intergenic 35.0%
TTACAATTATCACAGCACAC+AGG - chr5_4:65987158-65987177 None:intergenic 35.0%
! GTATCCATCTGGTTTACTAT+AGG + chr5_4:65987278-65987297 Msa0865360:intron 35.0%
!! GCATCTTTAGAATAATCCGT+CGG - chr5_4:65987551-65987570 None:intergenic 35.0%
!!! TGACATTCATTATCGGCTTT+TGG - chr5_4:65987889-65987908 None:intergenic 35.0%
ACTAACTCGTAGATGCAATT+TGG - chr5_4:65987946-65987965 None:intergenic 35.0%
TAGAGGAGACTTGTGATAAT+TGG + chr5_4:65988010-65988029 Msa0865360:CDS 35.0%
ACAGATTTCTATACTGTCCT+AGG + chr5_4:65988115-65988134 Msa0865360:CDS 35.0%
CAGATTTCTATACTGTCCTA+GGG + chr5_4:65988116-65988135 Msa0865360:CDS 35.0%
! TAAGACATTTTCAATGGCAC+TGG + chr5_4:65988163-65988182 Msa0865360:CDS 35.0%
AGTACATTGCTGACAATTAC+AGG - chr5_4:65988201-65988220 None:intergenic 35.0%
! AATGTACATCTGGTTTAAGC+TGG + chr5_4:65988223-65988242 Msa0865360:CDS 35.0%
! ATGTACATCTGGTTTAAGCT+GGG + chr5_4:65988224-65988243 Msa0865360:CDS 35.0%
AGGCTGTTAATTGCATAGAT+TGG + chr5_4:65988316-65988335 Msa0865360:CDS 35.0%
TAATTGCATAGATTGGTGTG+AGG + chr5_4:65988323-65988342 Msa0865360:CDS 35.0%
!! CAGTTTTGTAGAGTTCAGTT+AGG - chr5_4:65988465-65988484 None:intergenic 35.0%
GGTCTAAATTTCTTGATGTC+TGG + chr5_4:65988642-65988661 Msa0865360:intron 35.0%
CCAAGAATGTTAGGCAAATT+TGG - chr5_4:65988714-65988733 None:intergenic 35.0%
CCAAATTTGCCTAACATTCT+TGG + chr5_4:65988711-65988730 Msa0865360:intron 35.0%
AATATCCACCAATTCTTCAC+TGG + chr5_4:65988852-65988871 Msa0865360:CDS 35.0%
TTGTGTAACCAGTGAAGAAT+TGG - chr5_4:65988863-65988882 None:intergenic 35.0%
! AATTCTTCACTGGTTACACA+AGG + chr5_4:65988862-65988881 Msa0865360:CDS 35.0%
! ATTCTTCACTGGTTACACAA+GGG + chr5_4:65988863-65988882 Msa0865360:CDS 35.0%
TCTTTCAATTTCAACACCTC+AGG - chr5_4:65988912-65988931 None:intergenic 35.0%
TCCTGAAATAAATCAGAAGG+AGG - chr5_4:65988939-65988958 None:intergenic 35.0%
CGTTCCTGAAATAAATCAGA+AGG - chr5_4:65988942-65988961 None:intergenic 35.0%
! ATTGTTTAAAGCCTGACATG+GGG + chr5_4:65989063-65989082 Msa0865360:CDS 35.0%
! TATTGCTTATGGATTTGCTC+AGG + chr5_4:65989097-65989116 Msa0865360:CDS 35.0%
TCATGACAGGAAAGTCAAAA+AGG - chr5_4:65989189-65989208 None:intergenic 35.0%
ATAATTAAGAGGCTCATGAC+AGG - chr5_4:65989202-65989221 None:intergenic 35.0%
TAAAGTGGAACTGAAACCTA+AGG + chr5_4:65989599-65989618 Msa0865360:CDS 35.0%
!!! GTGCTCTTTGGGATATTTTT+CGG + chr5_4:65989769-65989788 Msa0865360:CDS 35.0%
AGAAGATGTACCCAAATTGA+AGG + chr5_4:65989794-65989813 Msa0865360:CDS 35.0%
!! GCTGATTTTACCTGCTTTAA+AGG - chr5_4:65989867-65989886 None:intergenic 35.0%
TTAGCAGCAGAGAAAGTAAA+TGG - chr5_4:65989934-65989953 None:intergenic 35.0%
TACATCACCAAAGTTGTAGA+AGG - chr5_4:65990113-65990132 None:intergenic 35.0%
!! TTCTACAACTTTGGTGATGT+AGG + chr5_4:65990112-65990131 Msa0865360:intron 35.0%
AAATGGTCTGATCATGAATG+GGG - chr5_4:65990145-65990164 None:intergenic 35.0%
!! TTTCTTGGTAGTTTGTTGAG+CGG + chr5_4:65990227-65990246 Msa0865360:intron 35.0%
AGCTTCTGAATAAAAGTCCA+AGG - chr5_4:65990306-65990325 None:intergenic 35.0%
! TGGACTTTTATTCAGAAGCT+AGG + chr5_4:65990306-65990325 Msa0865360:CDS 35.0%
TTACCTTCAGATTTCTGACT+TGG - chr5_4:65990365-65990384 None:intergenic 35.0%
!!! GTAAATTTTTTCTTGGAGCG+AGG + chr5_4:65990436-65990455 Msa0865360:intron 35.0%
TCTCTTATTGTTGGGTACAA+AGG - chr5_4:65990499-65990518 None:intergenic 35.0%
! TCCTAATTTGTATAGCGTGA+TGG + chr5_4:65990605-65990624 Msa0865360:intron 35.0%
TTTGTCTCTCCTGAACATAT+TGG + chr5_4:65990787-65990806 Msa0865360:CDS 35.0%
TTGGCAGTTCTGTGATTTAT+CGG - chr5_4:65990850-65990869 None:intergenic 35.0%
AAATACCTCAAACTTGTCCT+TGG - chr5_4:65990869-65990888 None:intergenic 35.0%
ATATATTCTCACATACCGGA+GGG + chr5_4:65991093-65991112 Msa0865360:intron 35.0%
CAGGAATGTAGAACTGAAAT+AGG - chr5_4:65991237-65991256 None:intergenic 35.0%
! GTATGACAATTTTCTTCACC+TGG - chr5_4:65991334-65991353 None:intergenic 35.0%
AGCAAAGTGGTCAAAATTTG+GGG - chr5_4:65991438-65991457 None:intergenic 35.0%
GAGCAAAGTGGTCAAAATTT+GGG - chr5_4:65991439-65991458 None:intergenic 35.0%
AGAGCAAAGTGGTCAAAATT+TGG - chr5_4:65991440-65991459 None:intergenic 35.0%
!! GAAGAAGTTTTAACCGGTTA+AGG - chr5_4:65991517-65991536 None:intergenic 35.0%
!! ACGACTGAAGAAGTTTTAAC+CGG - chr5_4:65991523-65991542 None:intergenic 35.0%
! AAAATGCTTTGGATGCTCTT+TGG - chr5_4:65991961-65991980 None:intergenic 35.0%
TGGAGAGAAAGAAAATGCTT+TGG - chr5_4:65991972-65991991 None:intergenic 35.0%
TCTATATATAGGGACCAACT+AGG - chr5_4:65992042-65992061 None:intergenic 35.0%
TGATTGGGGGTCTATATATA+GGG - chr5_4:65992052-65992071 None:intergenic 35.0%
ATGATTGGGGGTCTATATAT+AGG - chr5_4:65992053-65992072 None:intergenic 35.0%
ATATATAGACCCCCAATCAT+TGG + chr5_4:65992053-65992072 Msa0865360:intron 35.0%
! ATTGTTGATGAATGCGATTC+AGG - chr5_4:65992256-65992275 None:intergenic 35.0%
GAATCGCATTCATCAACAAT+AGG + chr5_4:65992256-65992275 Msa0865360:intron 35.0%
ATGATGTGAAGAACAATGCT+GGG - chr5_4:65992384-65992403 None:intergenic 35.0%
TATGATGTGAAGAACAATGC+TGG - chr5_4:65992385-65992404 None:intergenic 35.0%
!! TGGAATTGATTTGTATCTGG+AGG - chr5_4:65992478-65992497 None:intergenic 35.0%
AGCATCTATTGGTGAGAAAT+TGG - chr5_4:65992611-65992630 None:intergenic 35.0%
!! GACTGTTTGTTATTGATCTC+TGG - chr5_4:65992643-65992662 None:intergenic 35.0%
CGTGAAGAAGAAAACCAAAT+CGG + chr5_4:65992679-65992698 Msa0865360:CDS 35.0%
AGTGTTTCATCGTCAGGAAT+GGG - chr5_4:65986282-65986301 None:intergenic 40.0%
AAGTGTTTCATCGTCAGGAA+TGG - chr5_4:65986283-65986302 None:intergenic 40.0%
GAAACGGCGTCATTGAATAA+CGG + chr5_4:65986327-65986346 Msa0865360:CDS 40.0%
!! AACAGACTCTTCTGTTTCTG+CGG - chr5_4:65986385-65986404 None:intergenic 40.0%
GAAACTGCGTCGTTGAATTT+CGG + chr5_4:65986444-65986463 Msa0865360:CDS 40.0%
AACAGATTCTTCTGCTACTG+CGG - chr5_4:65986502-65986521 None:intergenic 40.0%
TTCCTCAGTTAAAGCTGCTA+TGG + chr5_4:65986608-65986627 Msa0865360:CDS 40.0%
TTGAAATGATGAAGAGCCTC+CGG - chr5_4:65986739-65986758 None:intergenic 40.0%
AGGCTCTTCATCATTTCAAC+CGG + chr5_4:65986740-65986759 Msa0865360:CDS 40.0%
! GACTTGTGGAACCTCATTTT+CGG - chr5_4:65986811-65986830 None:intergenic 40.0%
! TTTACATTGATGGCACGCTA+AGG - chr5_4:65986871-65986890 None:intergenic 40.0%
GTAAAAGAAGTGATAAGGGC+AGG + chr5_4:65986886-65986905 Msa0865360:CDS 40.0%
GCATACCCTGTTTGAACAAA+TGG + chr5_4:65986946-65986965 Msa0865360:CDS 40.0%
CCCTGTTTGAACAAATGGTA+AGG + chr5_4:65986951-65986970 Msa0865360:intron 40.0%
CCCTTACCATTTGTTCAAAC+AGG - chr5_4:65986955-65986974 None:intergenic 40.0%
! TCTTCCACATTTAAGACAGC+TGG + chr5_4:65987371-65987390 Msa0865360:CDS 40.0%
TCATCCAGCTGTCTTAAATG+TGG - chr5_4:65987378-65987397 None:intergenic 40.0%
TGTTCTGGTAAGGACTGATT+TGG + chr5_4:65987576-65987595 Msa0865360:intron 40.0%
!!! TCATTATCGGCTTTTGGACA+GGG - chr5_4:65987883-65987902 None:intergenic 40.0%
!!! TTCATTATCGGCTTTTGGAC+AGG - chr5_4:65987884-65987903 None:intergenic 40.0%
GCCGATAATGAATGTCATCA+TGG + chr5_4:65987892-65987911 Msa0865360:CDS 40.0%
ATGGTTTCCTTGAACTGAGA+AGG + chr5_4:65987911-65987930 Msa0865360:CDS 40.0%
! GAAGTATCCTTCTCAGTTCA+AGG - chr5_4:65987921-65987940 None:intergenic 40.0%
AACTCGTAGATGCAATTTGG+AGG - chr5_4:65987943-65987962 None:intergenic 40.0%
ATATCATCGGCGTTACTAAC+TGG - chr5_4:65988051-65988070 None:intergenic 40.0%
!!! CGATGAAGTTTTGGATGTGA+AGG + chr5_4:65988296-65988315 Msa0865360:CDS 40.0%
ACAATTCGCCCAAGAATGTT+AGG - chr5_4:65988723-65988742 None:intergenic 40.0%
TGTAACCAGTGAAGAATTGG+TGG - chr5_4:65988860-65988879 None:intergenic 40.0%
! TTCTTCACTGGTTACACAAG+GGG + chr5_4:65988864-65988883 Msa0865360:CDS 40.0%
GCCTCCTTCTGATTTATTTC+AGG + chr5_4:65988935-65988954 Msa0865360:CDS 40.0%
ATGAACTCAGCATTATGACG+AGG - chr5_4:65988969-65988988 None:intergenic 40.0%
AGGTTGAGAGAACCACTAAA+AGG - chr5_4:65989023-65989042 None:intergenic 40.0%
! TATGGATTTGCTCAGGATCT+TGG + chr5_4:65989104-65989123 Msa0865360:CDS 40.0%
! TTTTGTTCGTTGCACTGTCA+TGG + chr5_4:65989402-65989421 Msa0865360:intron 40.0%
!! CAATTGCAGTCCTTTAAAGC+AGG + chr5_4:65989854-65989873 Msa0865360:CDS 40.0%
AGAAAGTAAATGGTCACGAG+GGG - chr5_4:65989924-65989943 None:intergenic 40.0%
GAGAAAGTAAATGGTCACGA+GGG - chr5_4:65989925-65989944 None:intergenic 40.0%
AGAGAAAGTAAATGGTCACG+AGG - chr5_4:65989926-65989945 None:intergenic 40.0%
!! TTCAGATTTCTGACTTGGTG+AGG - chr5_4:65990360-65990379 None:intergenic 40.0%
TCACCAAGTCAGAAATCTGA+AGG + chr5_4:65990359-65990378 Msa0865360:CDS 40.0%
GCCATCACGCTATACAAATT+AGG - chr5_4:65990609-65990628 None:intergenic 40.0%
AAGCACTCACCAATATGTTC+AGG - chr5_4:65990799-65990818 None:intergenic 40.0%
TGTGATTTATCGGAAGCTTG+CGG - chr5_4:65990840-65990859 None:intergenic 40.0%
GATAAATCACAGAACTGCCA+AGG + chr5_4:65990849-65990868 Msa0865360:CDS 40.0%
CATATATTCTCACATACCGG+AGG + chr5_4:65991092-65991111 Msa0865360:intron 40.0%
GAGCAAGCTTGCATATATGA+CGG + chr5_4:65991121-65991140 Msa0865360:intron 40.0%
TTGACATGATGGCATAACAC+AGG - chr5_4:65991256-65991275 None:intergenic 40.0%
GGTTAGTGATTGCAAACTTC+AGG + chr5_4:65991393-65991412 Msa0865360:intron 40.0%
TGGGTAAAAACAGAGCAAAG+TGG - chr5_4:65991451-65991470 None:intergenic 40.0%
! TCTCTTCTTTTCGCCTTAAC+CGG + chr5_4:65991501-65991520 Msa0865360:intron 40.0%
AGACTGCCCTTAATGAAACT+TGG - chr5_4:65991992-65992011 None:intergenic 40.0%
TAGGGACCAACTAGGTTAAA+TGG - chr5_4:65992034-65992053 None:intergenic 40.0%
! ATGAATGCGATTCAGGTTTG+AGG - chr5_4:65992249-65992268 None:intergenic 40.0%
GTATCTGGAGGTTGTATTGA+TGG - chr5_4:65992466-65992485 None:intergenic 40.0%
CTCTGTTTCATGTTGTTCAC+CGG - chr5_4:65992556-65992575 None:intergenic 40.0%
GGTTCGAAAACAGCATCTAT+TGG - chr5_4:65992622-65992641 None:intergenic 40.0%
ATAACAAACAGTCAAGCCGA+AGG + chr5_4:65992650-65992669 Msa0865360:intron 40.0%
TAACAAACAGTCAAGCCGAA+GGG + chr5_4:65992651-65992670 Msa0865360:intron 40.0%
ACCAAATCGGAAGTAAGAAG+AGG + chr5_4:65992692-65992711 Msa0865360:CDS 40.0%
CCAAATCGGAAGTAAGAAGA+GGG + chr5_4:65992693-65992712 Msa0865360:CDS 40.0%
CATCTTTGTTCAACTCGATC+TGG - chr5_4:65992772-65992791 None:intergenic 40.0%
! GAATGGGTTCTTCTTGGTCT+GGG - chr5_4:65986266-65986285 None:intergenic 45.0%
!! GTAGGAAGTGTTTCATCGTC+AGG - chr5_4:65986288-65986307 None:intergenic 45.0%
ATTCAATGACGCCGTTTCAG+CGG - chr5_4:65986325-65986344 None:intergenic 45.0%
GCGTCATTGAATAACGGTGA+AGG + chr5_4:65986333-65986352 Msa0865360:CDS 45.0%
GGTGAAAATTCGGTTGAAGC+TGG + chr5_4:65986465-65986484 Msa0865360:CDS 45.0%
TTCGGTTGAAGCTGGTGATA+TGG + chr5_4:65986473-65986492 Msa0865360:CDS 45.0%
! CTCCATAGCAGCTTTAACTG+AGG - chr5_4:65986613-65986632 None:intergenic 45.0%
GAGAAAGAGAAAAGCGGAGA+AGG + chr5_4:65986779-65986798 Msa0865360:CDS 45.0%
GAAGGAATCCACCGAAAATG+AGG + chr5_4:65986797-65986816 Msa0865360:CDS 45.0%
! TTGTGGAACCTCATTTTCGG+TGG - chr5_4:65986808-65986827 None:intergenic 45.0%
AAAGTGAAACAGCAGCTGAG+GGG - chr5_4:65986982-65987001 None:intergenic 45.0%
CAAAGTGAAACAGCAGCTGA+GGG - chr5_4:65986983-65987002 None:intergenic 45.0%
ACAAAGTGAAACAGCAGCTG+AGG - chr5_4:65986984-65987003 None:intergenic 45.0%
! TCGCTTCATATTGTGTTGGC+TGG + chr5_4:65987009-65987028 Msa0865360:intron 45.0%
CTCAACTTCCTCATCGTTGT+TGG - chr5_4:65987325-65987344 None:intergenic 45.0%
GAGAGAGAAGCCAAGATACA+AGG + chr5_4:65987417-65987436 Msa0865360:CDS 45.0%
! GGCATTTTGTACAGCTTCTG+TGG - chr5_4:65987699-65987718 None:intergenic 45.0%
AGAGGAGACAAAGGTCAAAG+CGG - chr5_4:65987720-65987739 None:intergenic 45.0%
! CGAGTATGTATCACTGACTG+AGG + chr5_4:65987795-65987814 Msa0865360:CDS 45.0%
! TTTCAATGGCACTGGAGCAA+AGG + chr5_4:65988171-65988190 Msa0865360:CDS 45.0%
! TTCAATGGCACTGGAGCAAA+GGG + chr5_4:65988172-65988191 Msa0865360:CDS 45.0%
! AATGCACGCCACATGACTTT+TGG - chr5_4:65988252-65988271 None:intergenic 45.0%
AACTCTACAAAACTGCCGTG+TGG + chr5_4:65988470-65988489 Msa0865360:intron 45.0%
!! AAATTGGCTTGAGGTCCACA+CGG - chr5_4:65988488-65988507 None:intergenic 45.0%
!!! TATGTTTTTGGCCCCATGTC+AGG - chr5_4:65989077-65989096 None:intergenic 45.0%
TTTGCTCAGGATCTTGGACA+CGG + chr5_4:65989110-65989129 Msa0865360:CDS 45.0%
GTTGACGCATATCGCTAAAG+TGG + chr5_4:65989584-65989603 Msa0865360:CDS 45.0%
AGCACCTTGAGCAAGATAAG+AGG + chr5_4:65989652-65989671 Msa0865360:CDS 45.0%
GCACCTTGAGCAAGATAAGA+GGG + chr5_4:65989653-65989672 Msa0865360:CDS 45.0%
CAAGATAAGAGGGAGCTACA+TGG + chr5_4:65989663-65989682 Msa0865360:CDS 45.0%
AAGAGGGAGCTACATGGTTA+TGG + chr5_4:65989669-65989688 Msa0865360:CDS 45.0%
AGAGGGAGCTACATGGTTAT+GGG + chr5_4:65989670-65989689 Msa0865360:CDS 45.0%
! CACTAATGATAGTGACCTGC+TGG + chr5_4:65989725-65989744 Msa0865360:CDS 45.0%
! AATGATAGTGACCTGCTGGA+TGG + chr5_4:65989729-65989748 Msa0865360:CDS 45.0%
!! ATCCCTTAGAAGGTGCTCTT+TGG + chr5_4:65989757-65989776 Msa0865360:CDS 45.0%
!! TCCCTTAGAAGGTGCTCTTT+GGG + chr5_4:65989758-65989777 Msa0865360:CDS 45.0%
!! TCCCAAAGAGCACCTTCTAA+GGG - chr5_4:65989762-65989781 None:intergenic 45.0%
!! ATCCCAAAGAGCACCTTCTA+AGG - chr5_4:65989763-65989782 None:intergenic 45.0%
GCATCCGTAGAGCTAGATAA+TGG - chr5_4:65989902-65989921 None:intergenic 45.0%
GATGTAGTTACCAGTCGAAG+AGG + chr5_4:65990056-65990075 Msa0865360:intron 45.0%
TTACCAGTCGAAGAGGTCAT+TGG + chr5_4:65990063-65990082 Msa0865360:intron 45.0%
TGAGTGCTTTCGTTTGACAG+AGG + chr5_4:65990810-65990829 Msa0865360:CDS 45.0%
AACTGCCAAGGACAAGTTTG+AGG + chr5_4:65990861-65990880 Msa0865360:CDS 45.0%
TTTACCTGATGGCTGCTTCT+TGG + chr5_4:65991306-65991325 Msa0865360:intron 45.0%
ACCCCCAATCATTGGTGAAA+GGG + chr5_4:65992061-65992080 Msa0865360:intron 45.0%
TCCCCTTTCACCAATGATTG+GGG - chr5_4:65992066-65992085 None:intergenic 45.0%
GTCCCCTTTCACCAATGATT+GGG - chr5_4:65992067-65992086 None:intergenic 45.0%
AGTCCCCTTTCACCAATGAT+TGG - chr5_4:65992068-65992087 None:intergenic 45.0%
! TTGAGGATTGTGGTTGGTGT+TGG - chr5_4:65992232-65992251 None:intergenic 45.0%
TCAGGTTTGAGGATTGTGGT+TGG - chr5_4:65992238-65992257 None:intergenic 45.0%
! CGATTCAGGTTTGAGGATTG+TGG - chr5_4:65992242-65992261 None:intergenic 45.0%
GTGCGTTTGTGATGTGTTTG+TGG - chr5_4:65992498-65992517 None:intergenic 45.0%
!! GTTGTTCACCGGCTTTGAAA+CGG - chr5_4:65992545-65992564 None:intergenic 45.0%
CGGTGAACAACATGAAACAG+AGG + chr5_4:65992554-65992573 Msa0865360:CDS 45.0%
CTTCTTCACGAACTTCCCTT+CGG - chr5_4:65992669-65992688 None:intergenic 45.0%
CCCTCTTCTTACTTCCGATT+TGG - chr5_4:65992696-65992715 None:intergenic 45.0%
TCCTTCTCTGAGCTCAGATT+CGG - chr5_4:65992724-65992743 None:intergenic 45.0%
TCGATCTGGATGATGTGTGA+TGG - chr5_4:65992758-65992777 None:intergenic 45.0%
! GGAATGGGTTCTTCTTGGTC+TGG - chr5_4:65986267-65986286 None:intergenic 50.0%
! CGTCAGGAATGGGTTCTTCT+TGG - chr5_4:65986272-65986291 None:intergenic 50.0%
! TTCGGTTGAAGCTGGTGATG+TGG + chr5_4:65986356-65986375 Msa0865360:CDS 50.0%
TCAACGACGCAGTTTCAGCA+GGG - chr5_4:65986440-65986459 None:intergenic 50.0%
TTCAACGACGCAGTTTCAGC+AGG - chr5_4:65986441-65986460 None:intergenic 50.0%
!! GAATCTTGGTGCCAATACGG+TGG + chr5_4:65986545-65986564 Msa0865360:CDS 50.0%
! GCTGTTGACGGACGATGAAA+TGG + chr5_4:65986572-65986591 Msa0865360:CDS 50.0%
GGACGATGAAATGGCAGCTA+GGG + chr5_4:65986581-65986600 Msa0865360:CDS 50.0%
GAAGAAAGAGACGTGGTAGC+CGG + chr5_4:65986717-65986736 Msa0865360:CDS 50.0%
CAACCGGAGAGAAAGAAACG+CGG + chr5_4:65986756-65986775 Msa0865360:CDS 50.0%
AACCGGAGAGAAAGAAACGC+GGG + chr5_4:65986757-65986776 Msa0865360:CDS 50.0%
ACGCGGGAGAAAGAGAAAAG+CGG + chr5_4:65986773-65986792 Msa0865360:CDS 50.0%
AAGTGAAACAGCAGCTGAGG+GGG - chr5_4:65986981-65987000 None:intergenic 50.0%
ACAGCACACAGGACATGCTT+CGG - chr5_4:65987147-65987166 None:intergenic 50.0%
GGTCGAAACCAACAACGATG+AGG + chr5_4:65987314-65987333 Msa0865360:CDS 50.0%
CTAAAGATGCGCGTGTGTTC+TGG + chr5_4:65987561-65987580 Msa0865360:CDS 50.0%
CGCAACAACAGAGGAGACAA+AGG - chr5_4:65987729-65987748 None:intergenic 50.0%
ACTCGTGAGTGGTCAAGATC+TGG + chr5_4:65987829-65987848 Msa0865360:CDS 50.0%
CTCGTGAGTGGTCAAGATCT+GGG + chr5_4:65987830-65987849 Msa0865360:CDS 50.0%
AGATCTGGGTGGCATGCAAA+TGG + chr5_4:65987844-65987863 Msa0865360:CDS 50.0%
TGGTGTAGATCTACAGCCCT+AGG - chr5_4:65988135-65988154 None:intergenic 50.0%
AGGGCTGTAGATCTACACCA+TGG + chr5_4:65988135-65988154 Msa0865360:CDS 50.0%
! TCAATGGCACTGGAGCAAAG+GGG + chr5_4:65988173-65988192 Msa0865360:CDS 50.0%
GCTGGGAACCAAAAGTCATG+TGG + chr5_4:65988241-65988260 Msa0865360:CDS 50.0%
! CAACCTTGCTGTGAAGTTGC+CGG + chr5_4:65989037-65989056 Msa0865360:CDS 50.0%
AATCCGGCAACTTCACAGCA+AGG - chr5_4:65989043-65989062 None:intergenic 50.0%
TTGCTCAGGATCTTGGACAC+GGG + chr5_4:65989111-65989130 Msa0865360:CDS 50.0%
GCTCCCTCTTATCTTGCTCA+AGG - chr5_4:65989659-65989678 None:intergenic 50.0%
GAGGGAGCTACATGGTTATG+GGG + chr5_4:65989671-65989690 Msa0865360:CDS 50.0%
ATAGTGACCTGCTGGATGGA+GGG + chr5_4:65989733-65989752 Msa0865360:CDS 50.0%
CAACCAATGACCTCTTCGAC+TGG - chr5_4:65990069-65990088 None:intergenic 50.0%
GACTTGTAGGAGTCGAACCT+TGG + chr5_4:65990286-65990305 Msa0865360:intron 50.0%
!!! GATGCTGTTTTCATTCCCGC+TGG + chr5_4:65990330-65990349 Msa0865360:CDS 50.0%
ATATGACGGCGTTGCTCAGA+TGG + chr5_4:65991135-65991154 Msa0865360:intron 50.0%
ACTGAGACGACTAAGACTCG+CGG - chr5_4:65991760-65991779 None:intergenic 50.0%
GACCCCCAATCATTGGTGAA+AGG + chr5_4:65992060-65992079 Msa0865360:intron 50.0%
CCCCTTTCACCAATGATTGG+GGG - chr5_4:65992065-65992084 None:intergenic 50.0%
CCCCCAATCATTGGTGAAAG+GGG + chr5_4:65992062-65992081 Msa0865360:intron 50.0%
GGGACTGCACTGAATTCTAG+AGG + chr5_4:65992082-65992101 Msa0865360:intron 50.0%
!! TCATTTGGGAGCTGCCGTTT+TGG - chr5_4:65992119-65992138 None:intergenic 50.0%
ATCCAGCTCCGTTTCAAAGC+CGG + chr5_4:65992534-65992553 Msa0865360:CDS 50.0%
ACCGAATCTGAGCTCAGAGA+AGG + chr5_4:65992720-65992739 Msa0865360:CDS 50.0%
GCGGCGCCAACATTCAAAGT+AGG - chr5_4:65986306-65986325 None:intergenic 55.0%
GAATGTTGGCGCCGCTGAAA+CGG + chr5_4:65986311-65986330 Msa0865360:CDS 55.0%
! GGTGAAGGTTCGGTTGAAGC+TGG + chr5_4:65986348-65986367 Msa0865360:CDS 55.0%
CAACAGCGACTCCACCGTAT+TGG - chr5_4:65986559-65986578 None:intergenic 55.0%
TACGGTGGAGTCGCTGTTGA+CGG + chr5_4:65986560-65986579 Msa0865360:CDS 55.0%
CGGACGATGAAATGGCAGCT+AGG + chr5_4:65986580-65986599 Msa0865360:CDS 55.0%
CTCCCGCGTTTCTTTCTCTC+CGG - chr5_4:65986762-65986781 None:intergenic 55.0%
GATGCGCGTGTGTTCTGGTA+AGG + chr5_4:65987566-65987585 Msa0865360:intron 55.0%
CACCTAGAAGCTTCCCACCA+CGG - chr5_4:65987756-65987775 None:intergenic 55.0%
ACGAGTCTACGACTCGTGAG+TGG + chr5_4:65987818-65987837 Msa0865360:CDS 55.0%
GTGAGTGGTCAAGATCTGGG+TGG + chr5_4:65987833-65987852 Msa0865360:CDS 55.0%
TGGTTACACAAGGGGTCGCA+AGG + chr5_4:65988872-65988891 Msa0865360:CDS 55.0%
ACACAAGGGGTCGCAAGGAT+TGG + chr5_4:65988877-65988896 Msa0865360:CDS 55.0%
! GTCGCAAGGATTGGCGCAAT+TGG + chr5_4:65988886-65988905 Msa0865360:CDS 55.0%
TGCTCAGGATCTTGGACACG+GGG + chr5_4:65989112-65989131 Msa0865360:CDS 55.0%
GGAGCTACATGGTTATGGGG+AGG + chr5_4:65989674-65989693 Msa0865360:CDS 55.0%
GCTACATGGTTATGGGGAGG+CGG + chr5_4:65989677-65989696 Msa0865360:CDS 55.0%
GATAGTGACCTGCTGGATGG+AGG + chr5_4:65989732-65989751 Msa0865360:CDS 55.0%
TAGTGACCTGCTGGATGGAG+GGG + chr5_4:65989734-65989753 Msa0865360:CDS 55.0%
GATGGAGGGGATCCCTTAGA+AGG + chr5_4:65989747-65989766 Msa0865360:CDS 55.0%
! ACTTGGTGAGGCAAACCAGC+GGG - chr5_4:65990348-65990367 None:intergenic 55.0%
!! GACTTGGTGAGGCAAACCAG+CGG - chr5_4:65990349-65990368 None:intergenic 55.0%
! AAGCTTGCTCACTTGCCCTC+CGG - chr5_4:65991111-65991130 None:intergenic 55.0%
GGTACCAAGAAGCAGCCATC+AGG - chr5_4:65991313-65991332 None:intergenic 55.0%
GATGGCTGCTTCTTGGTACC+AGG + chr5_4:65991313-65991332 Msa0865360:intron 55.0%
GAAAGAGACGTGGTAGCCGG+AGG + chr5_4:65986720-65986739 Msa0865360:CDS 60.0%
CACGGAGCTCGCAACAACAG+AGG - chr5_4:65987738-65987757 None:intergenic 60.0%
CTCTGTTGTTGCGAGCTCCG+TGG + chr5_4:65987736-65987755 Msa0865360:CDS 60.0%
TGTTGTTGCGAGCTCCGTGG+TGG + chr5_4:65987739-65987758 Msa0865360:CDS 60.0%
GTTGTTGCGAGCTCCGTGGT+GGG + chr5_4:65987740-65987759 Msa0865360:CDS 60.0%
! CTCCGTGGTGGGAAGCTTCT+AGG + chr5_4:65987751-65987770 Msa0865360:CDS 60.0%
! CGTGGTGGGAAGCTTCTAGG+TGG + chr5_4:65987754-65987773 Msa0865360:CDS 60.0%
GGGTGGCATGCAAATGGCGA+TGG + chr5_4:65987850-65987869 Msa0865360:CDS 60.0%
! GGATTGGCGCAATTGGCCTG+AGG + chr5_4:65988893-65988912 Msa0865360:CDS 60.0%
!! CACCGGCTTTGAAACGGAGC+TGG - chr5_4:65992539-65992558 None:intergenic 60.0%
AGGGATCCCCTCCATCCAGC+AGG - chr5_4:65989743-65989762 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 65986198 65992792 65986198 ID=Msa0865360;Name=Msa0865360
chr5_4 mRNA 65986198 65992792 65986198 ID=Msa0865360-mRNA-1;Parent=Msa0865360;Name=Msa0865360-mRNA-1;_AED=0.28;_eAED=0.33;_QI=0|0.16|0.07|1|1|1|13|0|981
chr5_4 exon 65986198 65986967 65986198 ID=Msa0865360-mRNA-1:exon:20858;Parent=Msa0865360-mRNA-1
chr5_4 exon 65987115 65987214 65987115 ID=Msa0865360-mRNA-1:exon:20859;Parent=Msa0865360-mRNA-1
chr5_4 exon 65987300 65987438 65987300 ID=Msa0865360-mRNA-1:exon:20860;Parent=Msa0865360-mRNA-1
chr5_4 exon 65987519 65987582 65987519 ID=Msa0865360-mRNA-1:exon:20861;Parent=Msa0865360-mRNA-1
chr5_4 exon 65987666 65988344 65987666 ID=Msa0865360-mRNA-1:exon:20862;Parent=Msa0865360-mRNA-1
chr5_4 exon 65988843 65989172 65988843 ID=Msa0865360-mRNA-1:exon:20863;Parent=Msa0865360-mRNA-1
chr5_4 exon 65989576 65989875 65989576 ID=Msa0865360-mRNA-1:exon:20864;Parent=Msa0865360-mRNA-1
chr5_4 exon 65990134 65990206 65990134 ID=Msa0865360-mRNA-1:exon:20865;Parent=Msa0865360-mRNA-1
chr5_4 exon 65990295 65990380 65990295 ID=Msa0865360-mRNA-1:exon:20866;Parent=Msa0865360-mRNA-1
chr5_4 exon 65990763 65990882 65990763 ID=Msa0865360-mRNA-1:exon:20867;Parent=Msa0865360-mRNA-1
chr5_4 exon 65991335 65991393 65991335 ID=Msa0865360-mRNA-1:exon:20868;Parent=Msa0865360-mRNA-1
chr5_4 exon 65992482 65992575 65992482 ID=Msa0865360-mRNA-1:exon:20869;Parent=Msa0865360-mRNA-1
chr5_4 exon 65992661 65992792 65992661 ID=Msa0865360-mRNA-1:exon:20870;Parent=Msa0865360-mRNA-1
chr5_4 CDS 65986198 65986967 65986198 ID=Msa0865360-mRNA-1:cds;Parent=Msa0865360-mRNA-1
chr5_4 CDS 65987115 65987214 65987115 ID=Msa0865360-mRNA-1:cds;Parent=Msa0865360-mRNA-1
chr5_4 CDS 65987300 65987438 65987300 ID=Msa0865360-mRNA-1:cds;Parent=Msa0865360-mRNA-1
chr5_4 CDS 65987519 65987582 65987519 ID=Msa0865360-mRNA-1:cds;Parent=Msa0865360-mRNA-1
chr5_4 CDS 65987666 65988344 65987666 ID=Msa0865360-mRNA-1:cds;Parent=Msa0865360-mRNA-1
chr5_4 CDS 65988843 65989172 65988843 ID=Msa0865360-mRNA-1:cds;Parent=Msa0865360-mRNA-1
chr5_4 CDS 65989576 65989875 65989576 ID=Msa0865360-mRNA-1:cds;Parent=Msa0865360-mRNA-1
chr5_4 CDS 65990134 65990206 65990134 ID=Msa0865360-mRNA-1:cds;Parent=Msa0865360-mRNA-1
chr5_4 CDS 65990295 65990380 65990295 ID=Msa0865360-mRNA-1:cds;Parent=Msa0865360-mRNA-1
chr5_4 CDS 65990763 65990882 65990763 ID=Msa0865360-mRNA-1:cds;Parent=Msa0865360-mRNA-1
chr5_4 CDS 65991335 65991393 65991335 ID=Msa0865360-mRNA-1:cds;Parent=Msa0865360-mRNA-1
chr5_4 CDS 65992482 65992575 65992482 ID=Msa0865360-mRNA-1:cds;Parent=Msa0865360-mRNA-1
chr5_4 CDS 65992661 65992792 65992661 ID=Msa0865360-mRNA-1:cds;Parent=Msa0865360-mRNA-1
Gene Sequence

>Msa0865360

ATGGCGGAGGAAGAGAACAACGAAATTGTCACTTATAGAGTGAAAATCAAAGTCACACTCATTGTCCCAGACCAAGAAGAACCCATTCCTGACGATGAAACACTTCCTACTTTGAATGTTGGCGCCGCTGAAACGGCGTCATTGAATAACGGTGAAGGTTCGGTTGAAGCTGGTGATGTGGCAGCCGCAGAAACAGAAGAGTCTGTTCCTGATAGAGAAAAACAAGCTATGAATGGTGGCCCTGCTGAAACTGCGTCGTTGAATTTCGGTGAAAATTCGGTTGAAGCTGGTGATATGGCAGCCGCAGTAGCAGAAGAATCTGTTCCTGATCGAGAAAAACAAGCTATGAATCTTGGTGCCAATACGGTGGAGTCGCTGTTGACGGACGATGAAATGGCAGCTAGGGATTCTTCCTCAGTTAAAGCTGCTATGGAGATAATGAAACACGGAAGAAAGAGTTTTGCAGAAATTCAGAAGAGGAAGATGGATGAAGAAGCGTTGTTAGTGAGCAGAATAAAGGAAGAAAGAGACGTGGTAGCCGGAGGCTCTTCATCATTTCAACCGGAGAGAAAGAAACGCGGGAGAAAGAGAAAAGCGGAGAAGGAATCCACCGAAAATGAGGTTCCACAAGTCCACAAGAAACTTAATACCAAATTAAGTTCAGAGGAATCCTTAGCGTGCCATCAATGTAAAAGAAGTGATAAGGGCAGGGTTATAAGATGCACAAAATGCAAACGGAGAAGATATTGCATACCCTGTTTGAACAAATGGTATCCTAAATTGAATGAGAGCGATGTTGCCGAAGCATGTCCTGTGTGCTGTGATAATTGTAATTGTAAAGCATGCTTGCGATCTTTTAAACTCATCAATGAAATGAAGAATAAGGTCGAAACCAACAACGATGAGGAAGTTGAGTTCTCTAAGTATATGTTGAAAGGACTTCTTCCACATTTAAGACAGCTGGATGAAGAACAAATGATTGAGAAGGAGAGAGAAGCCAAGATACAAGGTCTCTCACTCTCAACGCTAAATATAAAACCGACGGATTATTCTAAAGATGCGCGTGTGTTCTGTGACAACTGCAAAACATCAATATTTGACTACCACAGAAGCTGTACAAAATGCCGCTTTGACCTTTGTCTCCTCTGTTGTTGCGAGCTCCGTGGTGGGAAGCTTCTAGGTGGTGCAGATCAAATTGAGCTCGAGTATGTATCACTGACTGAGGACGAGTCTACGACTCGTGAGTGGTCAAGATCTGGGTGGCATGCAAATGGCGATGGTAGCATTCCCTGTCCAAAAGCCGATAATGAATGTCATCATGGTTTCCTTGAACTGAGAAGGATACTTCCTCCAAATTGCATCTACGAGTTAGTATGTAAAGCAAACGAACTTGCAGAAACATTTAAGCTTCAAGATGTAGAGGAGACTTGTGATAATTGGTGTTCTTGCTTGAAACCAGTTAGTAACGCCGATGATATACACAATAACACAAGGAAGGCAGCTTTTCTTGAAAATTCAAGTGACAGATTTCTATACTGTCCTAGGGCTGTAGATCTACACCATGGAGATTTAAGACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTACTTGAATGTACATCTGGTTTAAGCTGGGAACCAAAAGTCATGTGGCGTGCATTCCGTCAAAAAACCAATTCTAAATACGATGAAGTTTTGGATGTGAAGGCTGTTAATTGCATAGATTGGTGTGAGAGAGATATTAATATCCACCAATTCTTCACTGGTTACACAAGGGGTCGCAAGGATTGGCGCAATTGGCCTGAGGTGTTGAAATTGAAAGATTGGCCTCCTTCTGATTTATTTCAGGAACGTTTACCTCGTCATAATGCTGAGTTCATAACTTCCTTGCCTTATAAAGAATATACAAATCCTTTTAGTGGTTCTCTCAACCTTGCTGTGAAGTTGCCGGATTATTGTTTAAAGCCTGACATGGGGCCAAAAACATATATTGCTTATGGATTTGCTCAGGATCTTGGACACGGGGATTCAGTCACTAAGCTCCATTGTAATGTGTTTGATACAGTAAATGTGTTGACGCATATCGCTAAAGTGGAACTGAAACCTAAGGAAATTACTGCCATTAAGAAATTGAGACATAAGCACCTTGAGCAAGATAAGAGGGAGCTACATGGTTATGGGGAGGCGGTTGATATATTTCATCGACACTCTGACACTAATGATAGTGACCTGCTGGATGGAGGGGATCCCTTAGAAGGTGCTCTTTGGGATATTTTTCGGAAAGAAGATGTACCCAAATTGAAGGAATATCTAAAGAAGCATTTCAGAGAGTTCAGACATGTCAATTGCAGTCCTTTAAAGCAGGTTATTGACCCCATTCATGATCAGACCATTTATTTGACTATGGAGCATAAGGTGAAACTCAAGGAGGAGTATGGAGTCGAACCTTGGACTTTTATTCAGAAGCTAGGAGATGCTGTTTTCATTCCCGCTGGTTTGCCTCACCAAGTCAGAAATCTGAAGTCGTGCATCAATGTTGCACTTGATTTTGTCTCTCCTGAACATATTGGTGAGTGCTTTCGTTTGACAGAGGAATTCCGCAAGCTTCCGATAAATCACAGAACTGCCAAGGACAAGTTTGAGGTGAAGAAAATTGTCATACATGCTATGCTTGATGTGATTGAAAAATTAGAGAAAGAAAGATACAAATCAATTCCACAAACACATCACAAACGCACACAATCACAACACGTGATCCAGCTCCGTTTCAAAGCCGGTGAACAACATGAAACAGAGTCAAGCCGAAGGGAAGTTCGTGAAGAAGAAAACCAAATCGGAAGTAAGAAGAGGGTGAAACCGAATCTGAGCTCAGAGAAGGAATCGCTACTGTCCATCACACATCATCCAGATCGAGTTGAACAAAGATGA
Protein sequence

>Msa0865360

MAEEENNEIVTYRVKIKVTLIVPDQEEPIPDDETLPTLNVGAAETASLNNGEGSVEAGDVAAAETEESVPDREKQAMNGGPAETASLNFGENSVEAGDMAAAVAEESVPDREKQAMNLGANTVESLLTDDEMAARDSSSVKAAMEIMKHGRKSFAEIQKRKMDEEALLVSRIKEERDVVAGGSSSFQPERKKRGRKRKAEKESTENEVPQVHKKLNTKLSSEESLACHQCKRSDKGRVIRCTKCKRRRYCIPCLNKWYPKLNESDVAEACPVCCDNCNCKACLRSFKLINEMKNKVETNNDEEVEFSKYMLKGLLPHLRQLDEEQMIEKEREAKIQGLSLSTLNIKPTDYSKDARVFCDNCKTSIFDYHRSCTKCRFDLCLLCCCELRGGKLLGGADQIELEYVSLTEDESTTREWSRSGWHANGDGSIPCPKADNECHHGFLELRRILPPNCIYELVCKANELAETFKLQDVEETCDNWCSCLKPVSNADDIHNNTRKAAFLENSSDRFLYCPRAVDLHHGDLRHFQWHWSKGEPVIVSNVLECTSGLSWEPKVMWRAFRQKTNSKYDEVLDVKAVNCIDWCERDINIHQFFTGYTRGRKDWRNWPEVLKLKDWPPSDLFQERLPRHNAEFITSLPYKEYTNPFSGSLNLAVKLPDYCLKPDMGPKTYIAYGFAQDLGHGDSVTKLHCNVFDTVNVLTHIAKVELKPKEITAIKKLRHKHLEQDKRELHGYGEAVDIFHRHSDTNDSDLLDGGDPLEGALWDIFRKEDVPKLKEYLKKHFREFRHVNCSPLKQVIDPIHDQTIYLTMEHKVKLKEEYGVEPWTFIQKLGDAVFIPAGLPHQVRNLKSCINVALDFVSPEHIGECFRLTEEFRKLPINHRTAKDKFEVKKIVIHAMLDVIEKLEKERYKSIPQTHHKRTQSQHVIQLRFKAGEQHETESSRREVREEENQIGSKKRVKPNLSSEKESLLSITHHPDRVEQR*