AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0866160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0866160 MtrunA17_Chr5g0448761 97.719 789 15 2 1 789 1 786 0.0 1615
Msa0866160 MtrunA17_Chr5g0448511 54.352 563 238 3 229 787 1 548 0.0 644
Msa0866160 MtrunA17_Chr5g0440451 40.423 710 379 9 22 713 4 687 0.0 550
Msa0866160 MtrunA17_Chr1g0202341 40.458 655 368 7 56 702 44 684 4.81e-172 511
Msa0866160 MtrunA17_Chr3g0118611 45.636 550 267 6 177 704 36 575 5.33e-168 504
Msa0866160 MtrunA17_Chr1g0207551 36.111 648 397 9 44 690 15 646 9.43e-142 437
Msa0866160 MtrunA17_Chr2g0329031 36.738 656 369 15 62 708 13 631 2.14e-141 434
Msa0866160 MtrunA17_Chr3g0080351 35.277 669 377 11 55 707 68 696 3.50e-141 437
Msa0866160 MtrunA17_Chr2g0287061 36.767 631 345 12 61 689 181 759 3.37e-125 394
Msa0866160 MtrunA17_Chr2g0287061 36.449 107 51 2 62 168 28 117 2.57e-13 73.9
Msa0866160 MtrunA17_Chr5g0441581 34.940 664 388 17 62 716 31 659 1.14e-124 389
Msa0866160 MtrunA17_Chr3g0082121 34.380 637 396 7 60 694 40 656 2.90e-120 378
Msa0866160 MtrunA17_Chr2g0296781 36.678 578 338 12 67 633 1 561 4.65e-119 375
Msa0866160 MtrunA17_Chr6g0458391 33.862 567 348 7 63 628 225 765 2.10e-110 354
Msa0866160 MtrunA17_Chr6g0458391 34.694 147 84 4 61 200 89 230 2.84e-17 86.7
Msa0866160 MtrunA17_Chr2g0324011 33.101 574 373 9 60 631 7 571 1.60e-106 338
Msa0866160 MtrunA17_Chr8g0363841 34.683 568 358 10 66 629 20 578 5.64e-106 340
Msa0866160 MtrunA17_Chr6g0477261 40.090 444 255 7 197 633 11 450 3.86e-104 334
Msa0866160 MtrunA17_Chr2g0291581 32.605 641 398 15 63 694 71 686 4.11e-104 335
Msa0866160 MtrunA17_Chr1g0203721 30.660 636 416 8 66 691 66 686 3.12e-103 338
Msa0866160 MtrunA17_Chr2g0287651 32.389 565 370 8 67 629 79 633 4.11e-101 332
Msa0866160 MtrunA17_Chr1g0196541 33.449 577 364 11 67 636 1 564 1.90e-98 321
Msa0866160 MtrunA17_Chr2g0291591 35.146 515 299 14 62 564 63 554 1.11e-95 309
Msa0866160 MtrunA17_Chr1g0203051 29.091 550 376 7 69 616 85 622 2.19e-87 289
Msa0866160 MtrunA17_Chr1g0198761 30.511 626 394 14 37 640 14 620 1.24e-83 282
Msa0866160 MtrunA17_Chr2g0276841 29.291 635 416 14 63 687 70 681 1.88e-82 278
Msa0866160 MtrunA17_Chr2g0294841 28.193 642 435 13 60 692 42 666 2.03e-82 279
Msa0866160 MtrunA17_Chr2g0290391 29.318 689 425 20 37 697 22 676 7.68e-73 251
Msa0866160 MtrunA17_Chr5g0431001 31.136 440 284 9 55 481 50 483 1.53e-62 218
Msa0866160 MtrunA17_Chr1g0164591 34.579 321 197 4 144 463 1 309 4.73e-60 206
Msa0866160 MtrunA17_Chr7g0258861 37.113 291 173 6 60 347 7 290 6.39e-54 189
Msa0866160 MtrunA17_Chr4g0033611 42.857 154 76 4 24 170 30 178 3.85e-28 114
Msa0866160 MtrunA17_Chr3g0078041 52.778 108 48 2 62 169 49 153 1.30e-27 111
Msa0866160 MtrunA17_Chr2g0329421 54.128 109 45 3 62 170 26 129 5.87e-26 106
Msa0866160 MtrunA17_Chr7g0233911 51.852 108 49 3 62 169 33 137 2.01e-25 105
Msa0866160 MtrunA17_Chr2g0329361 44.737 114 61 2 61 174 59 170 3.02e-25 105
Msa0866160 MtrunA17_Chr2g0308841 23.982 221 167 1 408 627 6 226 3.34e-23 100
Msa0866160 MtrunA17_Chr1g0149131 30.909 110 76 0 348 457 1 110 1.31e-16 76.6
Msa0866160 MtrunA17_Chr5g0401121 39.640 111 64 2 63 173 56 163 1.47e-16 78.2
Msa0866160 MtrunA17_Chr2g0331371 40.164 122 65 4 61 178 51 168 9.13e-13 68.2
Msa0866160 MtrunA17_Chr1g0171741 33.621 116 70 3 67 180 137 247 2.02e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0866160 AT4G38180.1 70.705 809 195 8 1 789 2 788 0.0 1158
Msa0866160 AT2G27110.2 46.022 641 306 9 57 696 43 644 0.0 585
Msa0866160 AT2G27110.1 46.022 641 306 9 57 696 43 644 0.0 585
Msa0866160 AT4G38170.1 48.540 548 261 5 241 787 18 545 0.0 546
Msa0866160 AT2G27110.3 52.564 468 214 3 229 696 40 499 1.31e-176 524
Msa0866160 AT4G15090.1 36.228 668 410 9 50 715 38 691 1.30e-150 461
Msa0866160 AT4G15090.5 36.228 668 410 9 50 715 38 691 1.30e-150 461
Msa0866160 AT4G15090.3 36.228 668 410 9 50 715 38 691 1.30e-150 461
Msa0866160 AT4G15090.2 36.228 668 410 9 50 715 38 691 1.30e-150 461
Msa0866160 AT4G15090.4 36.228 668 410 9 50 715 38 691 1.30e-150 461
Msa0866160 AT3G22170.2 34.942 684 389 10 24 690 30 674 1.84e-143 443
Msa0866160 AT3G22170.1 34.942 684 389 10 24 690 30 674 1.84e-143 443
Msa0866160 AT1G76320.3 36.783 628 362 12 67 688 1 599 4.80e-133 410
Msa0866160 AT5G18960.2 37.143 630 337 12 62 687 210 784 1.04e-132 413
Msa0866160 AT5G18960.2 39.837 123 48 4 46 168 35 131 7.21e-17 85.9
Msa0866160 AT5G18960.1 37.143 630 337 12 62 687 210 784 1.04e-132 413
Msa0866160 AT5G18960.1 39.837 123 48 4 46 168 35 131 7.21e-17 85.9
Msa0866160 AT1G76320.2 36.783 628 362 12 67 688 1 599 3.81e-132 410
Msa0866160 AT1G76320.1 36.783 628 362 12 67 688 1 599 4.30e-132 410
Msa0866160 AT1G76320.4 36.783 628 362 12 67 688 1 599 4.30e-132 410
Msa0866160 AT3G06250.2 36.090 665 349 15 40 687 155 760 1.01e-131 410
Msa0866160 AT3G06250.2 41.667 108 46 3 61 168 26 116 1.03e-16 85.1
Msa0866160 AT3G06250.1 36.090 665 349 15 40 687 155 760 1.01e-131 410
Msa0866160 AT3G06250.1 41.667 108 46 3 61 168 26 116 1.03e-16 85.1
Msa0866160 AT3G06250.3 36.090 665 349 15 40 687 155 760 1.01e-131 410
Msa0866160 AT3G06250.3 41.667 108 46 3 61 168 26 116 1.03e-16 85.1
Msa0866160 AT4G19990.3 35.303 643 353 15 60 686 18 613 4.94e-119 377
Msa0866160 AT4G19990.4 35.303 643 353 15 60 686 18 613 4.94e-119 377
Msa0866160 AT4G19990.5 35.303 643 353 15 60 686 18 613 8.52e-119 376
Msa0866160 AT4G19990.7 35.303 643 353 15 60 686 32 627 9.61e-119 376
Msa0866160 AT4G19990.6 35.303 643 353 15 60 686 18 613 1.72e-118 376
Msa0866160 AT4G19990.2 35.303 643 353 15 60 686 18 613 1.72e-118 376
Msa0866160 AT2G32250.5 33.283 661 385 9 25 685 1 605 5.25e-116 369
Msa0866160 AT2G32250.2 33.283 661 385 9 25 685 1 605 1.52e-115 369
Msa0866160 AT2G32250.4 33.283 661 385 9 25 685 1 605 1.52e-115 369
Msa0866160 AT2G32250.6 33.737 661 382 9 25 685 1 605 1.72e-115 369
Msa0866160 AT2G32250.1 33.737 661 382 9 25 685 1 605 1.72e-115 369
Msa0866160 AT2G32250.3 33.737 661 382 9 25 685 1 605 1.72e-115 369
Msa0866160 AT2G32250.8 33.764 619 355 8 67 685 1 564 6.95e-114 363
Msa0866160 AT2G32250.7 33.764 619 355 8 67 685 1 564 9.20e-114 363
Msa0866160 AT4G19990.1 33.943 601 334 15 102 686 3 556 1.21e-103 334
Msa0866160 AT1G52520.1 31.167 677 419 20 35 694 56 702 7.71e-97 317
Msa0866160 AT1G80010.1 30.640 656 403 17 63 693 95 723 7.14e-92 304
Msa0866160 AT1G10240.2 27.937 698 463 17 18 705 3 670 9.25e-84 281
Msa0866160 AT1G10240.1 27.937 698 463 17 18 705 3 670 9.25e-84 281
Msa0866160 AT5G28530.1 31.399 586 361 15 63 627 55 620 2.97e-75 258
Msa0866160 AT5G28530.3 31.399 586 357 16 63 627 55 616 6.18e-75 257
Msa0866160 AT5G28530.2 31.399 586 357 16 63 627 55 616 6.18e-75 257
Msa0866160 AT5G28530.4 28.522 575 329 16 63 627 55 557 3.92e-53 195
Msa0866160 AT5G28530.5 28.522 575 325 17 63 627 55 553 8.24e-53 194
Msa0866160 AT3G59470.3 43.429 175 78 5 12 170 3 172 6.33e-30 119
Msa0866160 AT3G59470.1 43.429 175 78 5 12 170 3 172 6.33e-30 119
Msa0866160 AT3G59470.2 43.429 175 78 5 12 170 15 184 7.98e-30 119
Msa0866160 AT2G43280.1 45.455 143 68 4 37 177 1 135 1.03e-28 114
Msa0866160 AT3G07500.1 47.368 133 65 3 39 170 8 136 1.57e-27 111
Msa0866160 AT2G43280.2 48.039 102 48 3 78 177 2 100 4.36e-21 91.7
Msa0866160 AT4G12850.2 42.982 114 55 3 58 168 3 109 1.01e-20 89.4
Msa0866160 AT4G12850.4 42.982 114 55 3 58 168 3 109 2.50e-20 88.6
Msa0866160 AT4G12850.1 42.982 114 55 3 58 168 3 109 2.62e-20 89.7

Find 197 sgRNAs with CRISPR-Local

Find 416 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTCCCACCGGCAAATTTC+TGG 0.095237 5_4:-67617450 Msa0866160:CDS
CAAAGAAGAAATTAGGATTT+TGG 0.123283 5_4:+67617223 None:intergenic
ACCTTTATCAACAAATTTAA+AGG 0.150987 5_4:+67616006 None:intergenic
TCATGTATATACTTACTATT+TGG 0.183092 5_4:-67616068 Msa0866160:CDS
TTACCCTTTGCTCCCTTTAC+TGG 0.199899 5_4:-67617063 Msa0866160:CDS
ACATATCATGTAGCTAAATT+TGG 0.219908 5_4:-67616301 Msa0866160:CDS
CATGGTCAACCTGTTCTCTT+TGG 0.223496 5_4:-67617030 Msa0866160:CDS
TGAACAGCAAAGAAGAAATT+AGG 0.236435 5_4:+67617216 None:intergenic
CCTTCTTTGCAGACATATTC+TGG 0.237940 5_4:-67616194 Msa0866160:CDS
AGAAGAAGAAGATGATGATT+TGG 0.241377 5_4:-67617871 Msa0866160:CDS
TTTGCAACATCATAAGTTTC+AGG 0.247657 5_4:+67615974 None:intergenic
GCCTTTAAATTTGTTGATAA+AGG 0.252707 5_4:-67616007 Msa0866160:CDS
AACCCTAATTGACACTTTAC+AGG 0.254986 5_4:-67617418 Msa0866160:CDS
TGAAACTCGGCTTCAAAGTT+TGG 0.256048 5_4:+67616784 None:intergenic
CAGCCTGTAAAGTGTCAATT+AGG 0.264947 5_4:+67617415 None:intergenic
TTGCAAACTGACGTTGCTTT+TGG 0.278488 5_4:+67616102 None:intergenic
TAATATCTTGCAGGATGATA+TGG 0.290977 5_4:-67612728 Msa0866160:intron
AATTTCTTCTTTGCTGTTCA+AGG 0.292471 5_4:-67617213 Msa0866160:CDS
CACTTTACAGGCTGCTGGTA+TGG 0.294110 5_4:-67617406 Msa0866160:CDS
TCTGCCAAGTGGATCGTATC+TGG 0.294800 5_4:-67617528 Msa0866160:CDS
GTAGAATTTGATATTGGTTT+GGG 0.307344 5_4:-67617966 Msa0866160:CDS
GGTAGAATTTGATATTGGTT+TGG 0.326592 5_4:-67617967 Msa0866160:CDS
CTTAAAGAACTGATTTAAAC+TGG 0.329541 5_4:+67616537 None:intergenic
GCGTTTGATCTCTCTGTCTT+TGG 0.332960 5_4:+67617611 None:intergenic
AACAAAATGGGGTTATTCAT+AGG 0.335181 5_4:+67612454 None:intergenic
AAGCAATACATTCCGCTTGC+AGG 0.336808 5_4:-67616666 Msa0866160:CDS
TTGACGAATTTGAGTCTTGC+TGG 0.341126 5_4:-67616735 Msa0866160:CDS
GTGTAATTCAACCTTGCCTT+GGG 0.343488 5_4:+67617141 None:intergenic
CAGAAACGGTGACGAGTGTC+TGG 0.344341 5_4:+67616865 None:intergenic
CTCCCCATCATCCTCAGCTT+TGG 0.350878 5_4:+67616330 None:intergenic
GAAGAAGAAGATGATGATTT+GGG 0.351944 5_4:-67617870 Msa0866160:CDS
TACATTCCGCTTGCAGGCAC+TGG 0.358152 5_4:-67616660 Msa0866160:CDS
ATCGCAGATTATCTCAATAA+AGG 0.363015 5_4:+67612388 None:intergenic
TTGTTTGTTTGTTTGTGGTT+TGG 0.366669 5_4:-67618004 Msa0866160:five_prime_UTR
AGCATGAACTCTTACTTTGA+TGG 0.369267 5_4:-67616577 Msa0866160:CDS
TTGCAGATCCAGAAATTTGC+CGG 0.376547 5_4:+67617442 None:intergenic
GGAGATGGGGTCCTCAATAC+TGG 0.377437 5_4:+67616442 None:intergenic
AAACTGAAGCTTCCTTTGTC+TGG 0.378773 5_4:-67616987 Msa0866160:CDS
GCTTTACTGAGGTTGATTGT+AGG 0.379314 5_4:-67617326 Msa0866160:CDS
ACATGGCTTACCGCCATGTC+TGG 0.388564 5_4:-67616955 Msa0866160:CDS
ACACTACTTACCGCTCTAAC+AGG 0.393642 5_4:-67617092 Msa0866160:CDS
GAAACTCGGCTTCAAAGTTT+GGG 0.402169 5_4:+67616785 None:intergenic
GGTATTTGTTTGTTTGTTTG+TGG 0.403783 5_4:-67618009 Msa0866160:five_prime_UTR
CGGCTTCAAAGTTTGGGAAC+TGG 0.404355 5_4:+67616791 None:intergenic
AGAATCATGATCAGTGGTTA+TGG 0.407548 5_4:+67616918 None:intergenic
TCTGCACTCATCAAAGAGTA+TGG 0.412149 5_4:-67617366 Msa0866160:CDS
GGTTGGCACGCTAACATTCA+TGG 0.415317 5_4:-67616356 Msa0866160:CDS
CTTGCCTCTCCATCGGAGAT+GGG 0.427432 5_4:+67616428 None:intergenic
AGGTTCCAGATCTCCGGCCT+CGG 0.431500 5_4:+67617815 None:intergenic
TGGTTTGGGAGGAGAATATG+AGG 0.434179 5_4:-67617952 Msa0866160:CDS
ATGAGCTTGAGTGTGCAAAT+AGG 0.437500 5_4:-67612681 Msa0866160:CDS
GGCCTGAAAACTCAAACATT+TGG 0.440126 5_4:+67616215 None:intergenic
GAGGTGGTAGAATTTGATAT+TGG 0.442215 5_4:-67617972 Msa0866160:CDS
CCATCAGCAATGGGAAGGTT+AGG 0.443830 5_4:-67615889 Msa0866160:CDS
CGAAGGCAGTGAACCTGATC+GGG 0.445748 5_4:+67617471 None:intergenic
TTGTTTGTTTGTGGTTTGGA+TGG 0.447891 5_4:-67618000 Msa0866160:exon
CCAGAATATGTCTGCAAAGA+AGG 0.449302 5_4:+67616194 None:intergenic
CCAACCCTTGTGACTGTTCG+TGG 0.450668 5_4:+67617588 None:intergenic
CGAACTTGTTCCACCCGATC+AGG 0.450679 5_4:-67617484 Msa0866160:CDS
GATTATCTCAATAAAGGATA+AGG 0.455669 5_4:+67612394 None:intergenic
TGAGATGATGGACGAGGATG+AGG 0.456458 5_4:-67617913 Msa0866160:CDS
CACTCGATTCCAAGAGGAGT+TGG 0.457309 5_4:-67616377 Msa0866160:CDS
TTGGGAGAAAGCAGCGGCAG+CGG 0.460216 5_4:-67617852 Msa0866160:CDS
TAATTACACTAGTGGCTGTC+AGG 0.463053 5_4:-67615837 Msa0866160:CDS
AGCCTGTAAAGTGTCAATTA+GGG 0.465989 5_4:+67617416 None:intergenic
GCGTGCCAACCAACTCCTCT+TGG 0.469006 5_4:+67616368 None:intergenic
TTGCAACATCATAAGTTTCA+GGG 0.472255 5_4:+67615975 None:intergenic
GGCTGTCAGGATGAAAGCTT+GGG 0.472435 5_4:-67615824 Msa0866160:CDS
AATGTGTCTCGCAAATATAC+AGG 0.473103 5_4:+67616634 None:intergenic
GCATCCAAAGCTGAGGATGA+TGG 0.473156 5_4:-67616334 Msa0866160:CDS
TCTGGAACCTTCTGAGGGTA+TGG 0.473420 5_4:-67617802 Msa0866160:CDS
TGGCTGTCAGGATGAAAGCT+TGG 0.476969 5_4:-67615825 Msa0866160:CDS
ACTTTACAGGCTGCTGGTAT+GGG 0.477051 5_4:-67617405 Msa0866160:CDS
AAAGCACAACCAAAGAGAAC+AGG 0.481412 5_4:+67617021 None:intergenic
AGATATGCCACTTGCAGAAA+CGG 0.486193 5_4:+67616851 None:intergenic
CATCCAAAGCTGAGGATGAT+GGG 0.487357 5_4:-67616333 Msa0866160:CDS
CGGCCTCTGAGGAGGATTGT+GGG 0.492172 5_4:-67612551 Msa0866160:exon
CCTAACCTTCCCATTGCTGA+TGG 0.492796 5_4:+67615889 None:intergenic
TATAATGAGATGGAAGAGTA+AGG 0.493011 5_4:+67616149 None:intergenic
TGATGGTTTACACCAGTAAA+GGG 0.493735 5_4:+67617051 None:intergenic
CGGAGATCTGGAACCTTCTG+AGG 0.494898 5_4:-67617808 Msa0866160:CDS
TGAATACTTTGCCAGTATTG+AGG 0.495207 5_4:-67616453 Msa0866160:CDS
TTCACTGCCTTCGTTCCCAC+CGG 0.499535 5_4:-67617461 Msa0866160:CDS
CGAGTCTGAAGAGGCTGCTA+AGG 0.500073 5_4:-67617775 Msa0866160:CDS
CTCGTCACCGTTTCTGCAAG+TGG 0.503151 5_4:-67616858 Msa0866160:CDS
GGTTCCAGATCTCCGGCCTC+GGG 0.504308 5_4:+67617816 None:intergenic
AATTCCTATGCTCGTCGTGT+TGG 0.505166 5_4:-67617744 Msa0866160:CDS
GAATTTGATATTGGTTTGGG+AGG 0.506640 5_4:-67617963 Msa0866160:CDS
TAAGCATATCACGAAACTTA+CGG 0.506729 5_4:-67612704 Msa0866160:CDS
ATGATGGTTTACACCAGTAA+AGG 0.513575 5_4:+67617050 None:intergenic
AGTGTAATTCAACCTTGCCT+TGG 0.518295 5_4:+67617140 None:intergenic
CTCATTATATACTCAAACGC+TGG 0.519018 5_4:-67616135 Msa0866160:CDS
GAGACAATTCGTTTGTGCTA+AGG 0.519061 5_4:-67617664 Msa0866160:CDS
AGCCCAGAAAACATTGGTGA+TGG 0.521427 5_4:+67617167 None:intergenic
AAATGTGAGACAACTTCTCC+TGG 0.528603 5_4:+67616818 None:intergenic
GGGAGTACATAGAAACAGAT+AGG 0.530239 5_4:-67612531 Msa0866160:three_prime_UTR
GGAGAACTCCCATCAGCAAT+GGG 0.531715 5_4:-67615898 Msa0866160:CDS
ATTGACACTTTACAGGCTGC+TGG 0.532057 5_4:-67617411 Msa0866160:CDS
ACGGCCTCTGAGGAGGATTG+TGG 0.532458 5_4:-67612552 Msa0866160:exon
GTTAGAGTTGTCAGTAAAGG+TGG 0.534829 5_4:-67612599 Msa0866160:CDS
AGAGAACAGGTTGACCATGA+TGG 0.535460 5_4:+67617034 None:intergenic
CAATTCGTTTGTGCTAAGGA+AGG 0.537258 5_4:-67617660 Msa0866160:CDS
CTCAGAAGGTTCCAGATCTC+CGG 0.537315 5_4:+67617809 None:intergenic
GAAACCAACACGACGAGCAT+AGG 0.538449 5_4:+67617740 None:intergenic
ACGAAGGCAGTGAACCTGAT+CGG 0.539597 5_4:+67617470 None:intergenic
TATGGTGGTATCAGCAAGGT+TGG 0.539841 5_4:-67617348 Msa0866160:CDS
CAAGTTAGAGTTGTCAGTAA+AGG 0.539938 5_4:-67612602 Msa0866160:CDS
TCTGGGCTGACCCCAAGGCA+AGG 0.540324 5_4:-67617152 Msa0866160:CDS
TCTCGTCGTTCTCGCCGCGA+CGG 0.544434 5_4:-67617699 Msa0866160:CDS
GGGAGAACTCCCATCAGCAA+TGG 0.547438 5_4:-67615899 Msa0866160:CDS
AATCGCCATAAAAGTTTACA+AGG 0.550036 5_4:-67617288 Msa0866160:CDS
GCCGCCGCATATTGAGATGA+TGG 0.551096 5_4:-67617925 Msa0866160:CDS
ACACCAGTAAAGGGAGCAAA+GGG 0.551736 5_4:+67617060 None:intergenic
TGATCAGTGGTTATGGAGAG+TGG 0.552554 5_4:+67616925 None:intergenic
GTTAACACATTTGTGAAACT+CGG 0.558202 5_4:+67616771 None:intergenic
TCGGATGCTTGCCTCTCCAT+CGG 0.558570 5_4:+67616421 None:intergenic
AATTCGTTTGTGCTAAGGAA+GGG 0.559501 5_4:-67617659 Msa0866160:CDS
GCGCAGGTAATGCGAAAGGA+GGG 0.559887 5_4:-67615920 Msa0866160:CDS
GATCAGTGGTTATGGAGAGT+GGG 0.560314 5_4:+67616926 None:intergenic
GATGATGGACGAGGATGAGG+AGG 0.560621 5_4:-67617910 Msa0866160:CDS
TATGAGTACAGATAATAAGT+AGG 0.562092 5_4:+67612285 None:intergenic
GCTATCACTTCGCTGAGTGA+TGG 0.562682 5_4:+67616597 None:intergenic
CGATTCCAAGAGGAGTTGGT+TGG 0.567024 5_4:-67616373 Msa0866160:CDS
GCATATCTTTAAGCAATGCC+AGG 0.569808 5_4:-67616836 Msa0866160:CDS
TACACCAGTAAAGGGAGCAA+AGG 0.570161 5_4:+67617059 None:intergenic
ATGATCTCAGGGACAACGAA+TGG 0.573433 5_4:-67616693 Msa0866160:CDS
CTAACCTTCCCATTGCTGAT+GGG 0.576542 5_4:+67615890 None:intergenic
ATAGGAAGTGTGAAATGTAC+CGG 0.577419 5_4:-67612663 Msa0866160:CDS
AAATTTGCCGGTGGGAACGA+AGG 0.578586 5_4:+67617454 None:intergenic
GCCCAGAAAACATTGGTGAT+GGG 0.579481 5_4:+67617168 None:intergenic
TGCACGATTCTTCTGCCAAG+TGG 0.580316 5_4:-67617539 Msa0866160:CDS
ACATTCCGCTTGCAGGCACT+GGG 0.581089 5_4:-67616659 Msa0866160:CDS
ATTGAGGACCCCATCTCCGA+TGG 0.581233 5_4:-67616437 Msa0866160:CDS
CCACGAACAGTCACAAGGGT+TGG 0.582221 5_4:-67617588 Msa0866160:CDS
ATCATATCTGTCTAAAAGTG+TGG 0.585384 5_4:+67616711 None:intergenic
TTTACTGGTGTAAACCATCA+TGG 0.586662 5_4:-67617048 Msa0866160:CDS
ATGAAAGACGGCCTCTGAGG+AGG 0.589614 5_4:-67612559 Msa0866160:exon
TGCAACATCATAAGTTTCAG+GGG 0.590648 5_4:+67615976 None:intergenic
ATCAGTGGTTATGGAGAGTG+GGG 0.594819 5_4:+67616927 None:intergenic
CTTCAAAGTTTGGGAACTGG+AGG 0.598863 5_4:+67616794 None:intergenic
AGATGGAAGAGTAAGGACAT+TGG 0.600676 5_4:+67616156 None:intergenic
CGTTTGAGTATATAATGAGA+TGG 0.602082 5_4:+67616139 None:intergenic
CGCAGGTAATGCGAAAGGAG+GGG 0.602168 5_4:-67615919 Msa0866160:CDS
AACTCCCATCAGCAATGGGA+AGG 0.604290 5_4:-67615894 Msa0866160:CDS
AAACAGAGAGCAAGTTAGAC+CGG 0.606350 5_4:+67612644 None:intergenic
CAACCCTTGTGACTGTTCGT+GGG 0.608141 5_4:+67617589 None:intergenic
TGCGCAGGTAATGCGAAAGG+AGG 0.609788 5_4:-67615921 Msa0866160:CDS
TTGCCTCTCCATCGGAGATG+GGG 0.612305 5_4:+67616429 None:intergenic
CAGATCCAGAAATTTGCCGG+TGG 0.612578 5_4:+67617445 None:intergenic
TGTGGTTTGGATGGAGAACG+AGG 0.614308 5_4:-67617991 Msa0866160:exon
TTTAGACAGATATGATCTCA+GGG 0.617719 5_4:-67616704 Msa0866160:CDS
AACGCCCACGAACAGTCACA+AGG 0.617810 5_4:-67617593 Msa0866160:CDS
AATCATGCTAATTACACTAG+TGG 0.620695 5_4:-67615845 Msa0866160:CDS
ATCCAAAGCTGAGGATGATG+GGG 0.622295 5_4:-67616332 Msa0866160:CDS
AGATCCAGAAATTTGCCGGT+GGG 0.622920 5_4:+67617446 None:intergenic
TATGGAATTCGAGTCTGAAG+AGG 0.624053 5_4:-67617784 Msa0866160:CDS
CTTGGGAGAGCATATGAATG+AGG 0.624492 5_4:-67615807 Msa0866160:intron
CAAATTTAAAGGCTTCATGT+CGG 0.625446 5_4:+67616017 None:intergenic
CAGCAAGGTTGGCTTTACTG+AGG 0.625913 5_4:-67617337 Msa0866160:CDS
CAGTGGTTATGGAGAGTGGG+GGG 0.627461 5_4:+67616929 None:intergenic
TGTGTTGAAAAGCCAGACAA+AGG 0.628839 5_4:+67616975 None:intergenic
TCGAATTCCATACCCTCAGA+AGG 0.628976 5_4:+67617795 None:intergenic
GGACCCCATCTCCGATGGAG+AGG 0.629360 5_4:-67616432 Msa0866160:CDS
ATTAAGATAAGCATGAAAGA+CGG 0.631649 5_4:-67612571 Msa0866160:CDS
AGGCAGTGAACCTGATCGGG+TGG 0.632274 5_4:+67617474 None:intergenic
AGGTACCCAGTGCCTGCAAG+CGG 0.638903 5_4:+67616654 None:intergenic
TTTGGGAGGAGAATATGAGG+AGG 0.639911 5_4:-67617949 Msa0866160:CDS
CAAAGCTGAGGATGATGGGG+AGG 0.640907 5_4:-67616329 Msa0866160:CDS
GGGGTCAGCCCAGAAAACAT+TGG 0.643984 5_4:+67617161 None:intergenic
ATGAATAATGAACTGAAGTG+AGG 0.645021 5_4:-67618030 Msa0866160:five_prime_UTR
AGAAACGGTGACGAGTGTCT+GGG 0.645500 5_4:+67616866 None:intergenic
GGAGATCTGGAACCTTCTGA+GGG 0.646337 5_4:-67617807 Msa0866160:CDS
TGGGAATACTTGCATTATAG+CGG 0.646366 5_4:+67616885 None:intergenic
GCATATTGAGATGATGGACG+AGG 0.650585 5_4:-67617919 Msa0866160:CDS
TGAAACTTATGATGTTGCAA+AGG 0.650987 5_4:-67615972 Msa0866160:CDS
AGCATGAAAGACGGCCTCTG+AGG 0.655501 5_4:-67612562 Msa0866160:exon
TTGATTGTAGGAATTACATG+AGG 0.657971 5_4:-67617314 Msa0866160:CDS
AGTTGCGCAGGTAATGCGAA+AGG 0.657991 5_4:-67615924 Msa0866160:CDS
TCATGTAGCTAAATTTGGAG+AGG 0.661413 5_4:-67616296 Msa0866160:CDS
AATGACAGAATCATGATCAG+TGG 0.665664 5_4:+67616912 None:intergenic
ATTCATGGCATCCAAAGCTG+AGG 0.668434 5_4:-67616341 Msa0866160:CDS
GAAGCCAGATACGATCCACT+TGG 0.669193 5_4:+67617524 None:intergenic
TCGTCCATCATCTCAATATG+CGG 0.670750 5_4:+67617921 None:intergenic
TCAAGGTGATCTTGATGACG+AGG 0.673752 5_4:-67617196 Msa0866160:CDS
AGAGTATGGTGGTATCAGCA+AGG 0.675333 5_4:-67617352 Msa0866160:CDS
TCCATCATCTCAATATGCGG+CGG 0.677985 5_4:+67617924 None:intergenic
GTAATCGATACCTGTTAGAG+CGG 0.683465 5_4:+67617082 None:intergenic
GCACTCATCAAAGAGTATGG+TGG 0.683994 5_4:-67617363 Msa0866160:CDS
CAATGAGAAAGAAGTAAGAG+CGG 0.684122 5_4:-67616488 Msa0866160:CDS
GATGATTTGGGAGAAAGCAG+CGG 0.686560 5_4:-67617858 Msa0866160:CDS
TGTAATTCAACCTTGCCTTG+GGG 0.693919 5_4:+67617142 None:intergenic
TCAGTGGTTATGGAGAGTGG+GGG 0.699327 5_4:+67616928 None:intergenic
ACGCCCACGAACAGTCACAA+GGG 0.715179 5_4:-67617592 Msa0866160:CDS
ACTCCCACAATCCTCCTCAG+AGG 0.731695 5_4:+67612548 None:intergenic
GGTTTGGATGGAGAACGAGG+TGG 0.749123 5_4:-67617988 Msa0866160:exon
TCTGAATGATAGCTCCGTCG+CGG 0.754566 5_4:+67617685 None:intergenic
AGTGCAGACATAATTCTGCG+AGG 0.756220 5_4:+67617381 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTTATTTACATCAAT+TGG - chr5_4:67615802-67615821 Msa0866160:intron 10.0%
!! AAATCATTAGAAAAAAAATA+GGG + chr5_4:67617163-67617182 None:intergenic 10.0%
!! AAAATCATTAGAAAAAAAAT+AGG + chr5_4:67617164-67617183 None:intergenic 10.0%
!! TATGATGATTATATATTAGT+AGG + chr5_4:67615474-67615493 None:intergenic 15.0%
!!! ATTTTATTTGTACATATTCA+GGG - chr5_4:67615680-67615699 Msa0866160:intron 15.0%
!!! ATATGGTTTTGAATTAATTA+AGG - chr5_4:67616549-67616568 Msa0866160:CDS 15.0%
!!! ACATTTTGTGTTTTAATATT+GGG - chr5_4:67616698-67616717 Msa0866160:CDS 15.0%
!! AATGTTGAATAATAATGATA+TGG - chr5_4:67617390-67617409 Msa0866160:CDS 15.0%
!!! TTTTGTCTAATAGATTATAT+CGG - chr5_4:67617533-67617552 Msa0866160:CDS 15.0%
!!! AAAGAAGAAATTAGGATTTT+GGG + chr5_4:67613132-67613151 None:intergenic 20.0%
!! TCATGTATATACTTACTATT+TGG - chr5_4:67614285-67614304 Msa0866160:intron 20.0%
!! ACCTTTATCAACAAATTTAA+AGG + chr5_4:67614350-67614369 None:intergenic 20.0%
!!! CATTTTATTTGTACATATTC+AGG - chr5_4:67615679-67615698 Msa0866160:intron 20.0%
!!! TTTTATTTGTACATATTCAG+GGG - chr5_4:67615681-67615700 Msa0866160:intron 20.0%
!! ATTGTATCACAATCAATATT+TGG + chr5_4:67615768-67615787 None:intergenic 20.0%
!! TAAGGAATTTATCTTTCAAA+AGG + chr5_4:67616005-67616024 None:intergenic 20.0%
!!! TTAGTTTTCTTTTTTCTCTT+AGG - chr5_4:67616447-67616466 Msa0866160:CDS 20.0%
!!! CACATTTTGTGTTTTAATAT+TGG - chr5_4:67616697-67616716 Msa0866160:CDS 20.0%
!!! AATGTTGTTAATGATGTTTT+TGG + chr5_4:67616898-67616917 None:intergenic 20.0%
!! TAAGAAAATAAATCAGATTG+AGG + chr5_4:67617071-67617090 None:intergenic 20.0%
!!! AATCTGATTTATTTTCTTAC+TGG - chr5_4:67617072-67617091 Msa0866160:CDS 20.0%
!!! ATCTGATTTATTTTCTTACT+GGG - chr5_4:67617073-67617092 Msa0866160:CDS 20.0%
!! TACAAAAACTTAACAAAATG+GGG + chr5_4:67617913-67617932 None:intergenic 20.0%
!! CTACAAAAACTTAACAAAAT+GGG + chr5_4:67617914-67617933 None:intergenic 20.0%
!! TCTACAAAAACTTAACAAAA+TGG + chr5_4:67617915-67617934 None:intergenic 20.0%
!!! GTAGAATTTGATATTGGTTT+GGG - chr5_4:67612387-67612406 Msa0866160:three_prime_UTR 25.0%
!! CAAAGAAGAAATTAGGATTT+TGG + chr5_4:67613133-67613152 None:intergenic 25.0%
!!! AGGTTGAATTACACTTTTTT+CGG - chr5_4:67613221-67613240 Msa0866160:intron 25.0%
!! CTTAAAGAACTGATTTAAAC+TGG + chr5_4:67613819-67613838 None:intergenic 25.0%
!! AATTTTTCTTGTGTAAAGCT+CGG + chr5_4:67613954-67613973 None:intergenic 25.0%
! ACATATCATGTAGCTAAATT+TGG - chr5_4:67614052-67614071 Msa0866160:intron 25.0%
!!! GCCTTTAAATTTGTTGATAA+AGG - chr5_4:67614346-67614365 Msa0866160:intron 25.0%
!! TTTTCTACCAACTTTACTAT+AGG + chr5_4:67614818-67614837 None:intergenic 25.0%
!!! TAGTAAAGTTGGTAGAAAAT+AGG - chr5_4:67614819-67614838 Msa0866160:intron 25.0%
!! TCTTTTCTAATGGTTTTCTT+AGG + chr5_4:67614944-67614963 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr5_4:67614949-67614968 Msa0866160:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG + chr5_4:67614989-67615008 None:intergenic 25.0%
!!! TCATCTTTTAAGAACCAAAT+TGG - chr5_4:67615916-67615935 Msa0866160:CDS 25.0%
!! TTTCATTGATTGAACAAAGT+TGG - chr5_4:67615979-67615998 Msa0866160:CDS 25.0%
!! TATTTTTCTTTATGCCCTAA+GGG + chr5_4:67616617-67616636 None:intergenic 25.0%
!! ATATTTTTCTTTATGCCCTA+AGG + chr5_4:67616618-67616637 None:intergenic 25.0%
! TTACTCTATGATACCTTTAT+AGG - chr5_4:67617186-67617205 Msa0866160:CDS 25.0%
! TACTCTATGATACCTTTATA+GGG - chr5_4:67617187-67617206 Msa0866160:CDS 25.0%
!!! ATATTTGTGAAAGCACTTTT+TGG + chr5_4:67617341-67617360 None:intergenic 25.0%
! TAATAATGATATGGAAAGAG+AGG - chr5_4:67617399-67617418 Msa0866160:CDS 25.0%
! AATAATGATATGGAAAGAGA+GGG - chr5_4:67617400-67617419 Msa0866160:CDS 25.0%
! CTTAATATCTAATATCTTGC+AGG - chr5_4:67617616-67617635 Msa0866160:CDS 25.0%
! ATTAAGATAAGCATGAAAGA+CGG - chr5_4:67617782-67617801 Msa0866160:CDS 25.0%
! GATTATCTCAATAAAGGATA+AGG + chr5_4:67617962-67617981 None:intergenic 25.0%
! TATGAGTACAGATAATAAGT+AGG + chr5_4:67618071-67618090 None:intergenic 25.0%
ATGAATAATGAACTGAAGTG+AGG - chr5_4:67612323-67612342 Msa0866160:three_prime_UTR 30.0%
GGTATTTGTTTGTTTGTTTG+TGG - chr5_4:67612344-67612363 Msa0866160:three_prime_UTR 30.0%
TTGTTTGTTTGTTTGTGGTT+TGG - chr5_4:67612349-67612368 Msa0866160:three_prime_UTR 30.0%
! GGTAGAATTTGATATTGGTT+TGG - chr5_4:67612386-67612405 Msa0866160:three_prime_UTR 30.0%
AGAAGAAGAAGATGATGATT+TGG - chr5_4:67612482-67612501 Msa0866160:three_prime_UTR 30.0%
GAAGAAGAAGATGATGATTT+GGG - chr5_4:67612483-67612502 Msa0866160:three_prime_UTR 30.0%
TTGATTGTAGGAATTACATG+AGG - chr5_4:67613039-67613058 Msa0866160:intron 30.0%
AATCGCCATAAAAGTTTACA+AGG - chr5_4:67613065-67613084 Msa0866160:intron 30.0%
TGAACAGCAAAGAAGAAATT+AGG + chr5_4:67613140-67613159 None:intergenic 30.0%
!! AATTTCTTCTTTGCTGTTCA+AGG - chr5_4:67613140-67613159 Msa0866160:intron 30.0%
GTTAACACATTTGTGAAACT+CGG + chr5_4:67613585-67613604 None:intergenic 30.0%
ATCATATCTGTCTAAAAGTG+TGG + chr5_4:67613645-67613664 None:intergenic 30.0%
! TTTTAGACAGATATGATCTC+AGG - chr5_4:67613648-67613667 Msa0866160:intron 30.0%
TTTAGACAGATATGATCTCA+GGG - chr5_4:67613649-67613668 Msa0866160:intron 30.0%
TATAATGAGATGGAAGAGTA+AGG + chr5_4:67614207-67614226 None:intergenic 30.0%
CGTTTGAGTATATAATGAGA+TGG + chr5_4:67614217-67614236 None:intergenic 30.0%
CAAATTTAAAGGCTTCATGT+CGG + chr5_4:67614339-67614358 None:intergenic 30.0%
TTGCAACATCATAAGTTTCA+GGG + chr5_4:67614381-67614400 None:intergenic 30.0%
TTTGCAACATCATAAGTTTC+AGG + chr5_4:67614382-67614401 None:intergenic 30.0%
TGAAACTTATGATGTTGCAA+AGG - chr5_4:67614381-67614400 Msa0866160:intron 30.0%
AATCATGCTAATTACACTAG+TGG - chr5_4:67614508-67614527 Msa0866160:intron 30.0%
GGTTAAAAACAACCGTAAAA+TGG + chr5_4:67614580-67614599 None:intergenic 30.0%
TATATCTCTATTCTCTAGCA+TGG + chr5_4:67614657-67614676 None:intergenic 30.0%
TTACTTTACTCATCCTATCT+TGG + chr5_4:67614700-67614719 None:intergenic 30.0%
TTGATCTACTCTTCTTACAA+CGG + chr5_4:67614885-67614904 None:intergenic 30.0%
TGTAAGAAGAGTAGATCAAA+TGG - chr5_4:67614886-67614905 Msa0866160:intron 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + chr5_4:67614954-67614973 None:intergenic 30.0%
! TGGTTTTTGATAGAACACTA+TGG - chr5_4:67614993-67615012 Msa0866160:intron 30.0%
CAACTTTATTGGAAGAATGA+TGG + chr5_4:67615202-67615221 None:intergenic 30.0%
!! GCTCTGAAATTCAACTTTAT+TGG + chr5_4:67615213-67615232 None:intergenic 30.0%
CAACAAAAATGAAGGTCAAA+GGG + chr5_4:67615416-67615435 None:intergenic 30.0%
TCAACAAAAATGAAGGTCAA+AGG + chr5_4:67615417-67615436 None:intergenic 30.0%
ATAGCACTCAACAAAAATGA+AGG + chr5_4:67615424-67615443 None:intergenic 30.0%
ACAAGACTCATAACTCAAAA+TGG + chr5_4:67615548-67615567 None:intergenic 30.0%
GATCGAACTTATCATCAATT+AGG - chr5_4:67615868-67615887 Msa0866160:CDS 30.0%
TCAGTTAGAACCTTAATGTT+TGG - chr5_4:67616216-67616235 Msa0866160:CDS 30.0%
CAGTTAGAACCTTAATGTTT+GGG - chr5_4:67616217-67616236 Msa0866160:CDS 30.0%
! TTTTATGTTCTCCGTTAACT+CGG - chr5_4:67616332-67616351 Msa0866160:CDS 30.0%
ACATCAAAATGTGAAGTTCT+TGG + chr5_4:67616378-67616397 None:intergenic 30.0%
! ATTTGCAATGTTTTTCCCTT+AGG - chr5_4:67616599-67616618 Msa0866160:CDS 30.0%
! TTTGCAATGTTTTTCCCTTA+GGG - chr5_4:67616600-67616619 Msa0866160:CDS 30.0%
! AGCACAAATGCACAAAATTT+TGG - chr5_4:67616813-67616832 Msa0866160:CDS 30.0%
! ACAAATGCACAAAATTTTGG+TGG - chr5_4:67616816-67616835 Msa0866160:CDS 30.0%
CCAAACTATTAAAAGAGGTT+TGG + chr5_4:67617026-67617045 None:intergenic 30.0%
! CCAAACCTCTTTTAATAGTT+TGG - chr5_4:67617023-67617042 Msa0866160:CDS 30.0%
TCAAGCCAAACTATTAAAAG+AGG + chr5_4:67617031-67617050 None:intergenic 30.0%
!!! GTTTGGCTTGAAGTTTTATT+TGG - chr5_4:67617040-67617059 Msa0866160:CDS 30.0%
! GTTCTACATTCTTTTCTACT+AGG - chr5_4:67617131-67617150 Msa0866160:CDS 30.0%
TGGAAAGAATAACCCTATAA+AGG + chr5_4:67617202-67617221 None:intergenic 30.0%
! ATTTTGTTCTTACGTGCATT+TGG - chr5_4:67617361-67617380 Msa0866160:CDS 30.0%
AAGACGCAGAATATATTAGA+AGG + chr5_4:67617431-67617450 None:intergenic 30.0%
TAATATCTTGCAGGATGATA+TGG - chr5_4:67617625-67617644 Msa0866160:CDS 30.0%
TAAGCATATCACGAAACTTA+CGG - chr5_4:67617649-67617668 Msa0866160:CDS 30.0%
AACAAAATGGGGTTATTCAT+AGG + chr5_4:67617902-67617921 None:intergenic 30.0%
ATCGCAGATTATCTCAATAA+AGG + chr5_4:67617968-67617987 None:intergenic 30.0%
! TTGTTTGTTTGTGGTTTGGA+TGG - chr5_4:67612353-67612372 Msa0866160:three_prime_UTR 35.0%
GAGGTGGTAGAATTTGATAT+TGG - chr5_4:67612381-67612400 Msa0866160:three_prime_UTR 35.0%
!! GAATTTGATATTGGTTTGGG+AGG - chr5_4:67612390-67612409 Msa0866160:three_prime_UTR 35.0%
AATTCGTTTGTGCTAAGGAA+GGG - chr5_4:67612694-67612713 Msa0866160:CDS 35.0%
!! GTGCATTTTGACAGATAAAG+AGG + chr5_4:67612799-67612818 None:intergenic 35.0%
AACCCTAATTGACACTTTAC+AGG - chr5_4:67612935-67612954 Msa0866160:intron 35.0%
! AGCCTGTAAAGTGTCAATTA+GGG + chr5_4:67612940-67612959 None:intergenic 35.0%
! TGTCGCCTTGTAAACTTTTA+TGG + chr5_4:67613073-67613092 None:intergenic 35.0%
TGATGGTTTACACCAGTAAA+GGG + chr5_4:67613305-67613324 None:intergenic 35.0%
ATGATGGTTTACACCAGTAA+AGG + chr5_4:67613306-67613325 None:intergenic 35.0%
TTTACTGGTGTAAACCATCA+TGG - chr5_4:67613305-67613324 Msa0866160:intron 35.0%
AGAATCATGATCAGTGGTTA+TGG + chr5_4:67613438-67613457 None:intergenic 35.0%
AATGACAGAATCATGATCAG+TGG + chr5_4:67613444-67613463 None:intergenic 35.0%
TGGGAATACTTGCATTATAG+CGG + chr5_4:67613471-67613490 None:intergenic 35.0%
AATGTGTCTCGCAAATATAC+AGG + chr5_4:67613722-67613741 None:intergenic 35.0%
AGCATGAACTCTTACTTTGA+TGG - chr5_4:67613776-67613795 Msa0866160:intron 35.0%
CAATGAGAAAGAAGTAAGAG+CGG - chr5_4:67613865-67613884 Msa0866160:intron 35.0%
TGAATACTTTGCCAGTATTG+AGG - chr5_4:67613900-67613919 Msa0866160:intron 35.0%
! AATTTTCACTCGATTCCAAG+AGG - chr5_4:67613970-67613989 Msa0866160:intron 35.0%
TCATGTAGCTAAATTTGGAG+AGG - chr5_4:67614057-67614076 Msa0866160:intron 35.0%
!! TGCCAAATGTTTGAGTTTTC+AGG - chr5_4:67614136-67614155 Msa0866160:intron 35.0%
CTCATTATATACTCAAACGC+TGG - chr5_4:67614218-67614237 Msa0866160:intron 35.0%
TGCAACATCATAAGTTTCAG+GGG + chr5_4:67614380-67614399 None:intergenic 35.0%
! GAGGTCAGAATTCCATTTTA+CGG - chr5_4:67614565-67614584 Msa0866160:intron 35.0%
! GTTTTTAACCTGTTCTACGA+TGG - chr5_4:67614590-67614609 Msa0866160:intron 35.0%
TTCTCTAGCATGGTGAATTA+AGG + chr5_4:67614647-67614666 None:intergenic 35.0%
CATTGAATCTTCACCAAGAT+AGG - chr5_4:67614684-67614703 Msa0866160:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr5_4:67614828-67614847 Msa0866160:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr5_4:67614833-67614852 Msa0866160:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr5_4:67614889-67614908 Msa0866160:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr5_4:67614961-67614980 Msa0866160:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr5_4:67614973-67614992 Msa0866160:intron 35.0%
AATCTTCACCAAATAGCTTG+CGG - chr5_4:67615093-67615112 Msa0866160:intron 35.0%
TTAGAGCCTCTATGATAAAG+TGG - chr5_4:67615145-67615164 Msa0866160:intron 35.0%
TGCTAACCACTTTATCATAG+AGG + chr5_4:67615154-67615173 None:intergenic 35.0%
CTTTATTGGAAGAATGATGG+TGG + chr5_4:67615199-67615218 None:intergenic 35.0%
AAGTTGAATTTCAGAGCACA+AGG - chr5_4:67615216-67615235 Msa0866160:intron 35.0%
TACTTTCAGTTGTACAGCTT+AGG - chr5_4:67615323-67615342 Msa0866160:intron 35.0%
CTTACCTTGAGAGCTAAAAA+GGG + chr5_4:67615364-67615383 None:intergenic 35.0%
TAAAACCGTAGACATGTAGA+AGG + chr5_4:67615508-67615527 None:intergenic 35.0%
GACTCATAACTCAAAATGGT+TGG + chr5_4:67615544-67615563 None:intergenic 35.0%
GTGTTGAATGAGTGTTTCAT+AGG + chr5_4:67615611-67615630 None:intergenic 35.0%
! GAGTAACTAGCTTCTCAATT+GGG + chr5_4:67615660-67615679 None:intergenic 35.0%
! TGAGTAACTAGCTTCTCAAT+TGG + chr5_4:67615661-67615680 None:intergenic 35.0%
ACATATTCAGGGGAAGTTAA+AGG - chr5_4:67615691-67615710 Msa0866160:intron 35.0%
ATGATAAGTTCGATCTTCAG+AGG + chr5_4:67615863-67615882 None:intergenic 35.0%
TTCCTTATCCATTAACCCTT+AGG - chr5_4:67616018-67616037 Msa0866160:CDS 35.0%
AAGTTCGTTAGAGGGAAAAA+TGG - chr5_4:67616098-67616117 Msa0866160:CDS 35.0%
AGTTCGTTAGAGGGAAAAAT+GGG - chr5_4:67616099-67616118 Msa0866160:CDS 35.0%
AAGAAAATGTGCAATTCCAG+AGG - chr5_4:67616173-67616192 Msa0866160:CDS 35.0%
AGAAAATGTGCAATTCCAGA+GGG - chr5_4:67616174-67616193 Msa0866160:CDS 35.0%
TTCTCTCTACCCAAACATTA+AGG + chr5_4:67616229-67616248 None:intergenic 35.0%
AAATGTGAAGTTCTTGGTCA+GGG + chr5_4:67616372-67616391 None:intergenic 35.0%
AAAATGTGAAGTTCTTGGTC+AGG + chr5_4:67616373-67616392 None:intergenic 35.0%
ATTAAGGATGCATACTGTGT+TGG - chr5_4:67616565-67616584 Msa0866160:CDS 35.0%
TTAAGGATGCATACTGTGTT+GGG - chr5_4:67616566-67616585 Msa0866160:CDS 35.0%
!! ACTGAATTGACTTGTAGATG+TGG - chr5_4:67616740-67616759 Msa0866160:CDS 35.0%
! ATGTGGTATGTTGTGGATTT+TGG - chr5_4:67616757-67616776 Msa0866160:CDS 35.0%
GGCAACAATTCAATGTGATA+TGG - chr5_4:67616837-67616856 Msa0866160:CDS 35.0%
! TAAGCACATCATGATGATGA+TGG + chr5_4:67617222-67617241 None:intergenic 35.0%
! AGAAATGAGAGAAAGCACAT+GGG + chr5_4:67617487-67617506 None:intergenic 35.0%
! AAGAAATGAGAGAAAGCACA+TGG + chr5_4:67617488-67617507 None:intergenic 35.0%
! ATAGGAAGTGTGAAATGTAC+CGG - chr5_4:67617690-67617709 Msa0866160:CDS 35.0%
CAAGTTAGAGTTGTCAGTAA+AGG - chr5_4:67617751-67617770 Msa0866160:CDS 35.0%
TCGTCCATCATCTCAATATG+CGG + chr5_4:67612435-67612454 None:intergenic 40.0%
TATGGAATTCGAGTCTGAAG+AGG - chr5_4:67612569-67612588 Msa0866160:CDS 40.0%
GAGACAATTCGTTTGTGCTA+AGG - chr5_4:67612689-67612708 Msa0866160:CDS 40.0%
CAATTCGTTTGTGCTAAGGA+AGG - chr5_4:67612693-67612712 Msa0866160:CDS 40.0%
TTGCAGATCCAGAAATTTGC+CGG + chr5_4:67612914-67612933 None:intergenic 40.0%
! CAGCCTGTAAAGTGTCAATT+AGG + chr5_4:67612941-67612960 None:intergenic 40.0%
TCTGCACTCATCAAAGAGTA+TGG - chr5_4:67612987-67613006 Msa0866160:intron 40.0%
! GCTTTACTGAGGTTGATTGT+AGG - chr5_4:67613027-67613046 Msa0866160:intron 40.0%
! ATCCCATCACCAATGTTTTC+TGG - chr5_4:67613183-67613202 Msa0866160:intron 40.0%
! TCCCATCACCAATGTTTTCT+GGG - chr5_4:67613184-67613203 Msa0866160:intron 40.0%
TGTAATTCAACCTTGCCTTG+GGG + chr5_4:67613214-67613233 None:intergenic 40.0%
GTGTAATTCAACCTTGCCTT+GGG + chr5_4:67613215-67613234 None:intergenic 40.0%
AGTGTAATTCAACCTTGCCT+TGG + chr5_4:67613216-67613235 None:intergenic 40.0%
GTAATCGATACCTGTTAGAG+CGG + chr5_4:67613274-67613293 None:intergenic 40.0%
AAAGCACAACCAAAGAGAAC+AGG + chr5_4:67613335-67613354 None:intergenic 40.0%
AAACTGAAGCTTCCTTTGTC+TGG - chr5_4:67613366-67613385 Msa0866160:intron 40.0%
TGTGTTGAAAAGCCAGACAA+AGG + chr5_4:67613381-67613400 None:intergenic 40.0%
!!! TTGTCTGGCTTTTCAACACA+TGG - chr5_4:67613381-67613400 Msa0866160:intron 40.0%
! AGATATGCCACTTGCAGAAA+CGG + chr5_4:67613505-67613524 None:intergenic 40.0%
GCATATCTTTAAGCAATGCC+AGG - chr5_4:67613517-67613536 Msa0866160:intron 40.0%
AAATGTGAGACAACTTCTCC+TGG + chr5_4:67613538-67613557 None:intergenic 40.0%
GAAACTCGGCTTCAAAGTTT+GGG + chr5_4:67613571-67613590 None:intergenic 40.0%
TGAAACTCGGCTTCAAAGTT+TGG + chr5_4:67613572-67613591 None:intergenic 40.0%
TTGACGAATTTGAGTCTTGC+TGG - chr5_4:67613618-67613637 Msa0866160:intron 40.0%
GGCCTGAAAACTCAAACATT+TGG + chr5_4:67614141-67614160 None:intergenic 40.0%
CCAGAATATGTCTGCAAAGA+AGG + chr5_4:67614162-67614181 None:intergenic 40.0%
CCTTCTTTGCAGACATATTC+TGG - chr5_4:67614159-67614178 Msa0866160:intron 40.0%
AGATGGAAGAGTAAGGACAT+TGG + chr5_4:67614200-67614219 None:intergenic 40.0%
!! TTGCAAACTGACGTTGCTTT+TGG + chr5_4:67614254-67614273 None:intergenic 40.0%
TAATTACACTAGTGGCTGTC+AGG - chr5_4:67614516-67614535 Msa0866160:intron 40.0%
ATAACATGCCATCGTAGAAC+AGG + chr5_4:67614601-67614620 None:intergenic 40.0%
GATGAGTAAAGTAAGCGTAG+CGG - chr5_4:67614706-67614725 Msa0866160:intron 40.0%
AGACTAGACAGGATAGGATT+AGG - chr5_4:67614759-67614778 Msa0866160:intron 40.0%
GGTAGCACCTATAGTAAAGT+TGG - chr5_4:67614808-67614827 Msa0866160:intron 40.0%
TCTTCTTACAACGGCATCTA+CGG + chr5_4:67614876-67614895 None:intergenic 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr5_4:67614914-67614933 Msa0866160:intron 40.0%
AGGTTAAAAGAGGTAGAGGA+AGG - chr5_4:67614918-67614937 Msa0866160:intron 40.0%
!!! GGTAGTTTTGACTTGTGTGT+TGG - chr5_4:67615237-67615256 Msa0866160:intron 40.0%
!! TCCAAAGGTTTTGTGGATGA+GGG - chr5_4:67615272-67615291 Msa0866160:intron 40.0%
CCTTACCTTGAGAGCTAAAA+AGG + chr5_4:67615365-67615384 None:intergenic 40.0%
!!! CCTTTTTAGCTCTCAAGGTA+AGG - chr5_4:67615362-67615381 Msa0866160:intron 40.0%
TGTGTCCTTCTACATGTCTA+CGG - chr5_4:67615500-67615519 Msa0866160:intron 40.0%
GCTTGAAGTACACGTCAATT+TGG - chr5_4:67615824-67615843 Msa0866160:CDS 40.0%
ATCTCAGTGCACTACCAATT+TGG + chr5_4:67615933-67615952 None:intergenic 40.0%
! GACCTAAGGGTTAATGGATA+AGG + chr5_4:67616023-67616042 None:intergenic 40.0%
ATCCTATCAGAGAGACCTAA+GGG + chr5_4:67616036-67616055 None:intergenic 40.0%
CCATTGGGCTATTCTCTTAA+TGG + chr5_4:67616059-67616078 None:intergenic 40.0%
CCATTAAGAGAATAGCCCAA+TGG - chr5_4:67616056-67616075 Msa0866160:CDS 40.0%
AATAGCCCAATGGATAGTAG+AGG - chr5_4:67616066-67616085 Msa0866160:CDS 40.0%
ACTCACCTCTACTATCCATT+GGG + chr5_4:67616074-67616093 None:intergenic 40.0%
AACTCACCTCTACTATCCAT+TGG + chr5_4:67616075-67616094 None:intergenic 40.0%
AATGGATAGTAGAGGTGAGT+TGG - chr5_4:67616074-67616093 Msa0866160:CDS 40.0%
GGAAAAATGGGAAACACATG+TGG - chr5_4:67616111-67616130 Msa0866160:CDS 40.0%
! TGATCTAAGATAACTCCCTC+TGG + chr5_4:67616192-67616211 None:intergenic 40.0%
AGTGATAGGAACCGAGTTAA+CGG + chr5_4:67616346-67616365 None:intergenic 40.0%
AATGTGAAGTTCTTGGTCAG+GGG + chr5_4:67616371-67616390 None:intergenic 40.0%
CTTGTAGATGTGGTATGTTG+TGG - chr5_4:67616750-67616769 Msa0866160:CDS 40.0%
AGAATGTAGAACCTCGTCTT+AGG + chr5_4:67617123-67617142 None:intergenic 40.0%
GGATATTGTCTGACAGTTGT+TGG - chr5_4:67617271-67617290 Msa0866160:CDS 40.0%
TTCTTACGTGCATTTGGTTG+AGG - chr5_4:67617367-67617386 Msa0866160:CDS 40.0%
! GAAATGAGAGAAAGCACATG+GGG + chr5_4:67617486-67617505 None:intergenic 40.0%
ATGAGCTTGAGTGTGCAAAT+AGG - chr5_4:67617672-67617691 Msa0866160:CDS 40.0%
AAACAGAGAGCAAGTTAGAC+CGG + chr5_4:67617712-67617731 None:intergenic 40.0%
!!! CTCTGTTTTGAAAGCTGTTG+AGG - chr5_4:67617724-67617743 Msa0866160:CDS 40.0%
GTTAGAGTTGTCAGTAAAGG+TGG - chr5_4:67617754-67617773 Msa0866160:CDS 40.0%
! GGGAGTACATAGAAACAGAT+AGG - chr5_4:67617822-67617841 Msa0866160:CDS 40.0%
! TGGTTTGGGAGGAGAATATG+AGG - chr5_4:67612401-67612420 Msa0866160:three_prime_UTR 45.0%
TTTGGGAGGAGAATATGAGG+AGG - chr5_4:67612404-67612423 Msa0866160:three_prime_UTR 45.0%
TCCATCATCTCAATATGCGG+CGG + chr5_4:67612432-67612451 None:intergenic 45.0%
!! GCATATTGAGATGATGGACG+AGG - chr5_4:67612434-67612453 Msa0866160:three_prime_UTR 45.0%
! GATGATTTGGGAGAAAGCAG+CGG - chr5_4:67612495-67612514 Msa0866160:three_prime_UTR 45.0%
TCGAATTCCATACCCTCAGA+AGG + chr5_4:67612561-67612580 None:intergenic 45.0%
AATTCCTATGCTCGTCGTGT+TGG - chr5_4:67612609-67612628 Msa0866160:CDS 45.0%
GCGTTTGATCTCTCTGTCTT+TGG + chr5_4:67612745-67612764 None:intergenic 45.0%
AGATCCAGAAATTTGCCGGT+GGG + chr5_4:67612910-67612929 None:intergenic 45.0%
ATTGACACTTTACAGGCTGC+TGG - chr5_4:67612942-67612961 Msa0866160:intron 45.0%
ACTTTACAGGCTGCTGGTAT+GGG - chr5_4:67612948-67612967 Msa0866160:intron 45.0%
AGTGCAGACATAATTCTGCG+AGG + chr5_4:67612975-67612994 None:intergenic 45.0%
! GCACTCATCAAAGAGTATGG+TGG - chr5_4:67612990-67613009 Msa0866160:intron 45.0%
AGAGTATGGTGGTATCAGCA+AGG - chr5_4:67613001-67613020 Msa0866160:intron 45.0%
TATGGTGGTATCAGCAAGGT+TGG - chr5_4:67613005-67613024 Msa0866160:intron 45.0%
!! TCAAGGTGATCTTGATGACG+AGG - chr5_4:67613157-67613176 Msa0866160:intron 45.0%
! GCCCAGAAAACATTGGTGAT+GGG + chr5_4:67613188-67613207 None:intergenic 45.0%
AGCCCAGAAAACATTGGTGA+TGG + chr5_4:67613189-67613208 None:intergenic 45.0%
ACACTACTTACCGCTCTAAC+AGG - chr5_4:67613261-67613280 Msa0866160:intron 45.0%
TTACCCTTTGCTCCCTTTAC+TGG - chr5_4:67613290-67613309 Msa0866160:intron 45.0%
ACACCAGTAAAGGGAGCAAA+GGG + chr5_4:67613296-67613315 None:intergenic 45.0%
TACACCAGTAAAGGGAGCAA+AGG + chr5_4:67613297-67613316 None:intergenic 45.0%
! AGAGAACAGGTTGACCATGA+TGG + chr5_4:67613322-67613341 None:intergenic 45.0%
CATGGTCAACCTGTTCTCTT+TGG - chr5_4:67613323-67613342 Msa0866160:intron 45.0%
ATCAGTGGTTATGGAGAGTG+GGG + chr5_4:67613429-67613448 None:intergenic 45.0%
GATCAGTGGTTATGGAGAGT+GGG + chr5_4:67613430-67613449 None:intergenic 45.0%
TGATCAGTGGTTATGGAGAG+TGG + chr5_4:67613431-67613450 None:intergenic 45.0%
CTTCAAAGTTTGGGAACTGG+AGG + chr5_4:67613562-67613581 None:intergenic 45.0%
ATGATCTCAGGGACAACGAA+TGG - chr5_4:67613660-67613679 Msa0866160:intron 45.0%
AAGCAATACATTCCGCTTGC+AGG - chr5_4:67613687-67613706 Msa0866160:intron 45.0%
ATTCATGGCATCCAAAGCTG+AGG - chr5_4:67614012-67614031 Msa0866160:intron 45.0%
CATCCAAAGCTGAGGATGAT+GGG - chr5_4:67614020-67614039 Msa0866160:intron 45.0%
ATCCAAAGCTGAGGATGATG+GGG - chr5_4:67614021-67614040 Msa0866160:intron 45.0%
CTAACCTTCCCATTGCTGAT+GGG + chr5_4:67614466-67614485 None:intergenic 45.0%
! CTTGGGAGAGCATATGAATG+AGG - chr5_4:67614546-67614565 Msa0866160:intron 45.0%
GATGAGTGGTAAGACTAGAC+AGG - chr5_4:67614748-67614767 Msa0866160:intron 45.0%
GTGGTAAGACTAGACAGGAT+AGG - chr5_4:67614753-67614772 Msa0866160:intron 45.0%
TGACACCATTAGAGAGAGAG+TGG - chr5_4:67614784-67614803 Msa0866160:intron 45.0%
GACACCATTAGAGAGAGAGT+GGG - chr5_4:67614785-67614804 Msa0866160:intron 45.0%
ACACCATTAGAGAGAGAGTG+GGG - chr5_4:67614786-67614805 Msa0866160:intron 45.0%
CTTCTTACAACGGCATCTAC+GGG + chr5_4:67614875-67614894 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr5_4:67614898-67614917 Msa0866160:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr5_4:67614908-67614927 Msa0866160:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr5_4:67615042-67615061 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr5_4:67615043-67615062 None:intergenic 45.0%
! ACCAAATAGCTTGCGGTCTT+GGG - chr5_4:67615100-67615119 Msa0866160:intron 45.0%
AAACCTTTGGACTTGAGGTG+TGG + chr5_4:67615263-67615282 None:intergenic 45.0%
CCACAAAACCTTTGGACTTG+AGG + chr5_4:67615268-67615287 None:intergenic 45.0%
! CCTCAAGTCCAAAGGTTTTG+TGG - chr5_4:67615265-67615284 Msa0866160:intron 45.0%
!! GTCCAAAGGTTTTGTGGATG+AGG - chr5_4:67615271-67615290 Msa0866160:intron 45.0%
TCCCTCATCCACAAAACCTT+TGG + chr5_4:67615276-67615295 None:intergenic 45.0%
!!! CACACCCTTTTTAGCTCTCA+AGG - chr5_4:67615357-67615376 Msa0866160:intron 45.0%
CAGAGAGACCTAAGGGTTAA+TGG + chr5_4:67616029-67616048 None:intergenic 45.0%
AACCCTTAGGTCTCTCTGAT+AGG - chr5_4:67616031-67616050 Msa0866160:CDS 45.0%
GATCCTATCAGAGAGACCTA+AGG + chr5_4:67616037-67616056 None:intergenic 45.0%
! TGAGTTGGCAAGTTCGTTAG+AGG - chr5_4:67616089-67616108 Msa0866160:CDS 45.0%
GAGTTGGCAAGTTCGTTAGA+GGG - chr5_4:67616090-67616109 Msa0866160:CDS 45.0%
GGGTAGAGAGAAATGTCTCT+AGG - chr5_4:67616237-67616256 Msa0866160:CDS 45.0%
!! TCTCTAGGAGCTTTTGCTCT+GGG - chr5_4:67616252-67616271 Msa0866160:CDS 45.0%
!!! AGCTTTTGCTCTGGGATTAC+AGG - chr5_4:67616260-67616279 Msa0866160:CDS 45.0%
!!! GCTTTTGCTCTGGGATTACA+GGG - chr5_4:67616261-67616280 Msa0866160:CDS 45.0%
!!! CTTTTGCTCTGGGATTACAG+GGG - chr5_4:67616262-67616281 Msa0866160:CDS 45.0%
! ATGCGTTTTCTTCCCAACGT+GGG - chr5_4:67616930-67616949 Msa0866160:CDS 45.0%
CATGTAACTGATCCCACGTT+GGG + chr5_4:67616945-67616964 None:intergenic 45.0%
!! ATAATTCTATTAATAAATTT+GGG + chr5_4:67616531-67616550 None:intergenic 5.0%
!! TATAATTCTATTAATAAATT+TGG + chr5_4:67616532-67616551 None:intergenic 5.0%
!! AATTTATTAATAGAATTATA+TGG - chr5_4:67616532-67616551 Msa0866160:CDS 5.0%
!!! AATATCATAAATTTAAAATA+TGG + chr5_4:67617562-67617581 None:intergenic 5.0%
! TGTGGTTTGGATGGAGAACG+AGG - chr5_4:67612362-67612381 Msa0866160:three_prime_UTR 50.0%
!! TGAGATGATGGACGAGGATG+AGG - chr5_4:67612440-67612459 Msa0866160:three_prime_UTR 50.0%
!!! CGGTGCTGTTTATTTTCCCG+AGG - chr5_4:67612521-67612540 Msa0866160:three_prime_UTR 50.0%
!! GCTGTTTATTTTCCCGAGGC+CGG - chr5_4:67612525-67612544 Msa0866160:three_prime_UTR 50.0%
CTCAGAAGGTTCCAGATCTC+CGG + chr5_4:67612547-67612566 None:intergenic 50.0%
! GGAGATCTGGAACCTTCTGA+GGG - chr5_4:67612546-67612565 Msa0866160:exon 50.0%
! TCTGGAACCTTCTGAGGGTA+TGG - chr5_4:67612551-67612570 Msa0866160:exon 50.0%
GAAACCAACACGACGAGCAT+AGG + chr5_4:67612616-67612635 None:intergenic 50.0%
TCTGAATGATAGCTCCGTCG+CGG + chr5_4:67612671-67612690 None:intergenic 50.0%
CAACCCTTGTGACTGTTCGT+GGG + chr5_4:67612767-67612786 None:intergenic 50.0%
TGCACGATTCTTCTGCCAAG+TGG - chr5_4:67612814-67612833 Msa0866160:intron 50.0%
TCTGCCAAGTGGATCGTATC+TGG - chr5_4:67612825-67612844 Msa0866160:intron 50.0%
GAAGCCAGATACGATCCACT+TGG + chr5_4:67612832-67612851 None:intergenic 50.0%
ACGAAGGCAGTGAACCTGAT+CGG + chr5_4:67612886-67612905 None:intergenic 50.0%
AAATTTGCCGGTGGGAACGA+AGG + chr5_4:67612902-67612921 None:intergenic 50.0%
CAGATCCAGAAATTTGCCGG+TGG + chr5_4:67612911-67612930 None:intergenic 50.0%
CACTTTACAGGCTGCTGGTA+TGG - chr5_4:67612947-67612966 Msa0866160:intron 50.0%
!! CAGCAAGGTTGGCTTTACTG+AGG - chr5_4:67613016-67613035 Msa0866160:intron 50.0%
TCAGTGGTTATGGAGAGTGG+GGG + chr5_4:67613428-67613447 None:intergenic 50.0%
AGAAACGGTGACGAGTGTCT+GGG + chr5_4:67613490-67613509 None:intergenic 50.0%
CGGCTTCAAAGTTTGGGAAC+TGG + chr5_4:67613565-67613584 None:intergenic 50.0%
GCTATCACTTCGCTGAGTGA+TGG + chr5_4:67613759-67613778 None:intergenic 50.0%
CACTCGATTCCAAGAGGAGT+TGG - chr5_4:67613976-67613995 Msa0866160:intron 50.0%
! CGATTCCAAGAGGAGTTGGT+TGG - chr5_4:67613980-67613999 Msa0866160:intron 50.0%
GGTTGGCACGCTAACATTCA+TGG - chr5_4:67613997-67614016 Msa0866160:intron 50.0%
GCATCCAAAGCTGAGGATGA+TGG - chr5_4:67614019-67614038 Msa0866160:intron 50.0%
AGCTGCAAAAAGAGTTGCGC+AGG - chr5_4:67614417-67614436 Msa0866160:intron 50.0%
AGTTGCGCAGGTAATGCGAA+AGG - chr5_4:67614429-67614448 Msa0866160:intron 50.0%
GGAGAACTCCCATCAGCAAT+GGG - chr5_4:67614455-67614474 Msa0866160:intron 50.0%
AACTCCCATCAGCAATGGGA+AGG - chr5_4:67614459-67614478 Msa0866160:intron 50.0%
CCTAACCTTCCCATTGCTGA+TGG + chr5_4:67614467-67614486 None:intergenic 50.0%
CCATCAGCAATGGGAAGGTT+AGG - chr5_4:67614464-67614483 Msa0866160:intron 50.0%
TGGCTGTCAGGATGAAAGCT+TGG - chr5_4:67614528-67614547 Msa0866160:intron 50.0%
GGCTGTCAGGATGAAAGCTT+GGG - chr5_4:67614529-67614548 Msa0866160:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+CGG - chr5_4:67614714-67614733 Msa0866160:intron 50.0%
CACCATTAGAGAGAGAGTGG+GGG - chr5_4:67614787-67614806 Msa0866160:intron 50.0%
TACCCCCACTCTCTCTCTAA+TGG + chr5_4:67614792-67614811 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr5_4:67615038-67615057 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr5_4:67615044-67615063 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr5_4:67615041-67615060 Msa0866160:intron 50.0%
! CACCAAATAGCTTGCGGTCT+TGG - chr5_4:67615099-67615118 Msa0866160:intron 50.0%
TCCCAAGACCGCAAGCTATT+TGG + chr5_4:67615104-67615123 None:intergenic 50.0%
GCTCTCAAGGTAAGGCTAGT+TGG - chr5_4:67615370-67615389 Msa0866160:intron 50.0%
GAAACACATGTGGCAGAGAG+TGG - chr5_4:67616121-67616140 Msa0866160:CDS 50.0%
!! GTCTCTAGGAGCTTTTGCTC+TGG - chr5_4:67616251-67616270 Msa0866160:CDS 50.0%
! GATGCGTTTTCTTCCCAACG+TGG - chr5_4:67616929-67616948 Msa0866160:CDS 50.0%
CCATGTAACTGATCCCACGT+TGG + chr5_4:67616946-67616965 None:intergenic 50.0%
CCAACGTGGGATCAGTTACA+TGG - chr5_4:67616943-67616962 Msa0866160:CDS 50.0%
TCGTCTTAGGTGCGTTAGGT+AGG + chr5_4:67617110-67617129 None:intergenic 50.0%
TACCTAACGCACCTAAGACG+AGG - chr5_4:67617109-67617128 Msa0866160:CDS 50.0%
AACCTCGTCTTAGGTGCGTT+AGG + chr5_4:67617114-67617133 None:intergenic 50.0%
GGTTTGGATGGAGAACGAGG+TGG - chr5_4:67612365-67612384 Msa0866160:three_prime_UTR 55.0%
GCCGCCGCATATTGAGATGA+TGG - chr5_4:67612428-67612447 Msa0866160:three_prime_UTR 55.0%
!! GATGATGGACGAGGATGAGG+AGG - chr5_4:67612443-67612462 Msa0866160:three_prime_UTR 55.0%
! CGGAGATCTGGAACCTTCTG+AGG - chr5_4:67612545-67612564 Msa0866160:exon 55.0%
CGAGTCTGAAGAGGCTGCTA+AGG - chr5_4:67612578-67612597 Msa0866160:CDS 55.0%
AACGCCCACGAACAGTCACA+AGG - chr5_4:67612760-67612779 Msa0866160:intron 55.0%
ACGCCCACGAACAGTCACAA+GGG - chr5_4:67612761-67612780 Msa0866160:intron 55.0%
CCAACCCTTGTGACTGTTCG+TGG + chr5_4:67612768-67612787 None:intergenic 55.0%
CCACGAACAGTCACAAGGGT+TGG - chr5_4:67612765-67612784 Msa0866160:intron 55.0%
! CGAACTTGTTCCACCCGATC+AGG - chr5_4:67612869-67612888 Msa0866160:intron 55.0%
CGAAGGCAGTGAACCTGATC+GGG + chr5_4:67612885-67612904 None:intergenic 55.0%
TTCACTGCCTTCGTTCCCAC+CGG - chr5_4:67612892-67612911 Msa0866160:intron 55.0%
CGTTCCCACCGGCAAATTTC+TGG - chr5_4:67612903-67612922 Msa0866160:intron 55.0%
GGGGTCAGCCCAGAAAACAT+TGG + chr5_4:67613195-67613214 None:intergenic 55.0%
! TGTTTTCTGGGCTGACCCCA+AGG - chr5_4:67613196-67613215 Msa0866160:intron 55.0%
ACATGGCTTACCGCCATGTC+TGG - chr5_4:67613398-67613417 Msa0866160:intron 55.0%
CAGTGGTTATGGAGAGTGGG+GGG + chr5_4:67613427-67613446 None:intergenic 55.0%
CAGAAACGGTGACGAGTGTC+TGG + chr5_4:67613491-67613510 None:intergenic 55.0%
CTCGTCACCGTTTCTGCAAG+TGG - chr5_4:67613495-67613514 Msa0866160:intron 55.0%
TACATTCCGCTTGCAGGCAC+TGG - chr5_4:67613693-67613712 Msa0866160:intron 55.0%
ACATTCCGCTTGCAGGCACT+GGG - chr5_4:67613694-67613713 Msa0866160:intron 55.0%
GGAGATGGGGTCCTCAATAC+TGG + chr5_4:67613914-67613933 None:intergenic 55.0%
ATTGAGGACCCCATCTCCGA+TGG - chr5_4:67613916-67613935 Msa0866160:intron 55.0%
TTGCCTCTCCATCGGAGATG+GGG + chr5_4:67613927-67613946 None:intergenic 55.0%
CTTGCCTCTCCATCGGAGAT+GGG + chr5_4:67613928-67613947 None:intergenic 55.0%
TCGGATGCTTGCCTCTCCAT+CGG + chr5_4:67613935-67613954 None:intergenic 55.0%
CTCCCCATCATCCTCAGCTT+TGG + chr5_4:67614026-67614045 None:intergenic 55.0%
!! CAAAGCTGAGGATGATGGGG+AGG - chr5_4:67614024-67614043 Msa0866160:intron 55.0%
TGCGCAGGTAATGCGAAAGG+AGG - chr5_4:67614432-67614451 Msa0866160:intron 55.0%
GCGCAGGTAATGCGAAAGGA+GGG - chr5_4:67614433-67614452 Msa0866160:intron 55.0%
CGCAGGTAATGCGAAAGGAG+GGG - chr5_4:67614434-67614453 Msa0866160:intron 55.0%
GGGAGAACTCCCATCAGCAA+TGG - chr5_4:67614454-67614473 Msa0866160:intron 55.0%
CGGATGTTGCGTTGGATGAG+TGG - chr5_4:67614734-67614753 Msa0866160:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr5_4:67615030-67615049 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr5_4:67615029-67615048 Msa0866160:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr5_4:67615030-67615049 Msa0866160:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr5_4:67615036-67615055 Msa0866160:intron 55.0%
TGGCCACACCTCAAGTCCAA+AGG - chr5_4:67615257-67615276 Msa0866160:intron 55.0%
ACACATGTGGCAGAGAGTGG+TGG - chr5_4:67616124-67616143 Msa0866160:CDS 55.0%
CACATGTGGCAGAGAGTGGT+GGG - chr5_4:67616125-67616144 Msa0866160:CDS 55.0%
CTTGGTCAGGGGAGAGTGAT+AGG + chr5_4:67616360-67616379 None:intergenic 55.0%
AGGTGCGTTAGGTAGGTGTG+TGG + chr5_4:67617103-67617122 None:intergenic 55.0%
AGCATGAAAGACGGCCTCTG+AGG - chr5_4:67617791-67617810 Msa0866160:CDS 55.0%
! ATGAAAGACGGCCTCTGAGG+AGG - chr5_4:67617794-67617813 Msa0866160:CDS 55.0%
ACTCCCACAATCCTCCTCAG+AGG + chr5_4:67617808-67617827 None:intergenic 55.0%
TTGGGAGAAAGCAGCGGCAG+CGG - chr5_4:67612501-67612520 Msa0866160:three_prime_UTR 60.0%
! TTTTCCCGAGGCCGGAGATC+TGG - chr5_4:67612533-67612552 Msa0866160:three_prime_UTR 60.0%
AGGTTCCAGATCTCCGGCCT+CGG + chr5_4:67612541-67612560 None:intergenic 60.0%
AGGCAGTGAACCTGATCGGG+TGG + chr5_4:67612882-67612901 None:intergenic 60.0%
AGGTACCCAGTGCCTGCAAG+CGG + chr5_4:67613702-67613721 None:intergenic 60.0%
GCTTGCCTCTCCATCGGAGA+TGG + chr5_4:67613929-67613948 None:intergenic 60.0%
GCGTGCCAACCAACTCCTCT+TGG + chr5_4:67613988-67614007 None:intergenic 60.0%
CGGAGATGCGGATGTTGCGT+TGG - chr5_4:67614726-67614745 Msa0866160:intron 60.0%
! ACGGCCTCTGAGGAGGATTG+TGG - chr5_4:67617801-67617820 Msa0866160:CDS 60.0%
! CGGCCTCTGAGGAGGATTGT+GGG - chr5_4:67617802-67617821 Msa0866160:CDS 60.0%
GGTTCCAGATCTCCGGCCTC+GGG + chr5_4:67612540-67612559 None:intergenic 65.0%
TCTCGTCGTTCTCGCCGCGA+CGG - chr5_4:67612654-67612673 Msa0866160:CDS 65.0%
TCTGGGCTGACCCCAAGGCA+AGG - chr5_4:67613201-67613220 Msa0866160:intron 65.0%
GGACCCCATCTCCGATGGAG+AGG - chr5_4:67613921-67613940 Msa0866160:intron 65.0%
!! GTGGCAGAGAGTGGTGGGTG+AGG - chr5_4:67616130-67616149 Msa0866160:CDS 65.0%
!! TGGGGGGCGTCCAGACATGG+CGG + chr5_4:67613411-67613430 None:intergenic 70.0%
!! GAGTGGGGGGCGTCCAGACA+TGG + chr5_4:67613414-67613433 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 67612270 67618105 67612270 ID=Msa0866160;Name=Msa0866160
chr5_4 mRNA 67612270 67618105 67612270 ID=Msa0866160-mRNA-1;Parent=Msa0866160;Name=Msa0866160-mRNA-1;_AED=0.00;_eAED=0.00;_QI=102|1|1|1|1|1|2|294|789
chr5_4 exon 67612270 67612737 67612270 ID=Msa0866160-mRNA-1:exon:21384;Parent=Msa0866160-mRNA-1
chr5_4 exon 67615808 67618105 67615808 ID=Msa0866160-mRNA-1:exon:21383;Parent=Msa0866160-mRNA-1
chr5_4 five_prime_UTR 67618004 67618105 67618004 ID=Msa0866160-mRNA-1:five_prime_utr;Parent=Msa0866160-mRNA-1
chr5_4 CDS 67615808 67618003 67615808 ID=Msa0866160-mRNA-1:cds;Parent=Msa0866160-mRNA-1
chr5_4 CDS 67612564 67612737 67612564 ID=Msa0866160-mRNA-1:cds;Parent=Msa0866160-mRNA-1
chr5_4 three_prime_UTR 67612270 67612563 67612270 ID=Msa0866160-mRNA-1:three_prime_utr;Parent=Msa0866160-mRNA-1
Gene Sequence

>Msa0866160

ATGGAGAACGAGGTGGTAGAATTTGATATTGGTTTGGGAGGAGAATATGAGGAGGAGCCGCCGCATATTGAGATGATGGACGAGGATGAGGAGGAAGAATATGAAGAAGTAGAAGAAGAAGATGATGATTTGGGAGAAAGCAGCGGCAGCGGTGCTGTTTATTTTCCCGAGGCCGGAGATCTGGAACCTTCTGAGGGTATGGAATTCGAGTCTGAAGAGGCTGCTAAGGCTTTCTATAATTCCTATGCTCGTCGTGTTGGTTTCAGTACTCGAGTCAGTTCTTCTCGTCGTTCTCGCCGCGACGGAGCTATCATTCAGAGACAATTCGTTTGTGCTAAGGAAGGGTTTCGCAATTTGAACGAGAAACGTACCAAAGACAGAGAGATCAAACGCCCACGAACAGTCACAAGGGTTGGATGCAAAGCCTCTTTATCTGTCAAAATGCACGATTCTTCTGCCAAGTGGATCGTATCTGGCTTCGTCAGAGAACACAATCACGAACTTGTTCCACCCGATCAGGTTCACTGCCTTCGTTCCCACCGGCAAATTTCTGGATCTGCAAAAACCCTAATTGACACTTTACAGGCTGCTGGTATGGGTCCTCGCAGAATTATGTCTGCACTCATCAAAGAGTATGGTGGTATCAGCAAGGTTGGCTTTACTGAGGTTGATTGTAGGAATTACATGAGGAATAATCGCCATAAAAGTTTACAAGGCGACATTCAACTTGTTCTTGATTATTTGAGACAAATGCATGCCCAAAATCCTAATTTCTTCTTTGCTGTTCAAGGTGATCTTGATGACGAGGATCATCCCATCACCAATGTTTTCTGGGCTGACCCCAAGGCAAGGTTGAATTACACTTTTTTCGGAGATACTGTCACTTTTGACACTACTTACCGCTCTAACAGGTATCGATTACCCTTTGCTCCCTTTACTGGTGTAAACCATCATGGTCAACCTGTTCTCTTTGGTTGTGCTTTTCTAATTAATGAAACTGAAGCTTCCTTTGTCTGGCTTTTCAACACATGGCTTACCGCCATGTCTGGACGCCCCCCACTCTCCATAACCACTGATCATGATTCTGTCATTCAGTCCGCTATAATGCAAGTATTCCCAGACACTCGTCACCGTTTCTGCAAGTGGCATATCTTTAAGCAATGCCAGGAGAAGTTGTCTCACATTTTCCTCCAGTTCCCAAACTTTGAAGCCGAGTTTCACAAATGTGTTAACTTGACTGACTCAATTGACGAATTTGAGTCTTGCTGGTCCACACTTTTAGACAGATATGATCTCAGGGACAACGAATGGCTTCAAGCAATACATTCCGCTTGCAGGCACTGGGTACCTGTATATTTGCGAGACACATTCTTTGCAGAGATGTCCATCACTCAGCGAAGTGATAGCATGAACTCTTACTTTGATGGCTATGTGAATGCTTCAACCAGTTTAAATCAGTTCTTTAAGCTTTATGAGAAAACGCTTGAAAGTCGCAATGAGAAAGAAGTAAGAGCGGATTATGACACAATGAATACTTTGCCAGTATTGAGGACCCCATCTCCGATGGAGAGGCAAGCATCCGAGCTTTACACAAGAAAAATTTTCACTCGATTCCAAGAGGAGTTGGTTGGCACGCTAACATTCATGGCATCCAAAGCTGAGGATGATGGGGAGGTCATTACATATCATGTAGCTAAATTTGGAGAGGATCATAAAGCATTCAATGTTAGATTCAATGTTTTAGAGATGAAAGCGACTTGCAGTTGCCAAATGTTTGAGTTTTCAGGCCTTCTTTGCAGACATATTCTGGCAGTATTTAGAGTTACCAATGTCCTTACTCTTCCATCTCATTATATACTCAAACGCTGGACAAAAAATGCCAAAAGCAACGTCAGTTTGCAAGAACATTCTTCTCATGTATATACTTACTATTTGGAATCTCATACAGTTAGATATAATACTCTCCGACATGAAGCCTTTAAATTTGTTGATAAAGGTGCAAGCTCCCCTGAAACTTATGATGTTGCAAAGGATGCTTTACAAGAAGCTGCAAAAAGAGTTGCGCAGGTAATGCGAAAGGAGGGGAGAACTCCCATCAGCAATGGGAAGGTTAGGAGTCACTTGCTGAATGATGAAAATCATGCTAATTACACTAGTGGCTGTCAGGATGAAAGCTTGGGAGAGCATATGAATGAGGATGATATGGATAAGCATATCACGAAACTTACGGATGAGCTTGAGTGTGCAAATAGGAAGTGTGAAATGTACCGGTCTAACTTGCTCTCTGTTTTGAAAGCTGTTGAGGATCACAAGTTAGAGTTGTCAGTAAAGGTGGAAAACATTAAGATAAGCATGAAAGACGGCCTCTGA
Protein sequence

>Msa0866160

MENEVVEFDIGLGGEYEEEPPHIEMMDEDEEEEYEEVEEEDDDLGESSGSGAVYFPEAGDLEPSEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSSAKWIVSGFVREHNHELVPPDQVHCLRSHRQISGSAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRHKSLQGDIQLVLDYLRQMHAQNPNFFFAVQGDLDDEDHPITNVFWADPKARLNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINETEASFVWLFNTWLTAMSGRPPLSITTDHDSVIQSAIMQVFPDTRHRFCKWHIFKQCQEKLSHIFLQFPNFEAEFHKCVNLTDSIDEFESCWSTLLDRYDLRDNEWLQAIHSACRHWVPVYLRDTFFAEMSITQRSDSMNSYFDGYVNASTSLNQFFKLYEKTLESRNEKEVRADYDTMNTLPVLRTPSPMERQASELYTRKIFTRFQEELVGTLTFMASKAEDDGEVITYHVAKFGEDHKAFNVRFNVLEMKATCSCQMFEFSGLLCRHILAVFRVTNVLTLPSHYILKRWTKNAKSNVSLQEHSSHVYTYYLESHTVRYNTLRHEAFKFVDKGASSPETYDVAKDALQEAAKRVAQVMRKEGRTPISNGKVRSHLLNDENHANYTSGCQDESLGEHMNEDDMDKHITKLTDELECANRKCEMYRSNLLSVLKAVEDHKLELSVKVENIKISMKDGL*