Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868210 | AES68615.2 | 77.821 | 514 | 46 | 8 | 1 | 467 | 4 | 496 | 0.0 | 788 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868210 | sp|Q9SLH0|EIL1_ARATH | 57.561 | 205 | 81 | 2 | 1 | 202 | 107 | 308 | 4.86e-83 | 270 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868210 | G7IVH7 | 77.821 | 514 | 46 | 8 | 1 | 467 | 4 | 496 | 0.0 | 788 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0868210 | TF | EIL |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868210 | MtrunA17_Chr3g0080401 | 86.337 | 344 | 32 | 5 | 1 | 342 | 4 | 334 | 0.0 | 602 |
| Msa0868210 | MtrunA17_Chr6g0476301 | 50.281 | 356 | 155 | 7 | 1 | 341 | 4 | 352 | 5.12e-105 | 317 |
| Msa0868210 | MtrunA17_Chr6g0473191 | 60.851 | 235 | 90 | 2 | 1 | 233 | 4 | 238 | 5.36e-95 | 288 |
| Msa0868210 | MtrunA17_Chr6g0476291 | 58.723 | 235 | 95 | 2 | 1 | 233 | 4 | 238 | 1.37e-91 | 279 |
| Msa0868210 | MtrunA17_Chr3g0118361 | 50.602 | 249 | 117 | 3 | 1 | 249 | 109 | 351 | 1.17e-84 | 272 |
| Msa0868210 | MtrunA17_Chr5g0440591 | 53.982 | 226 | 102 | 2 | 1 | 225 | 106 | 330 | 1.44e-82 | 266 |
| Msa0868210 | MtrunA17_Chr2g0329151 | 58.081 | 198 | 78 | 3 | 1 | 197 | 97 | 290 | 9.96e-78 | 254 |
| Msa0868210 | MtrunA17_Chr3g0124291 | 49.744 | 195 | 97 | 1 | 1 | 194 | 86 | 280 | 1.60e-68 | 224 |
| Msa0868210 | MtrunA17_Chr8g0382561 | 52.792 | 197 | 89 | 3 | 1 | 194 | 76 | 271 | 4.18e-68 | 224 |
| Msa0868210 | MtrunA17_Chr7g0260281 | 43.000 | 100 | 47 | 3 | 9 | 100 | 23 | 120 | 7.61e-15 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868210 | AT2G27050.1 | 57.561 | 205 | 81 | 2 | 1 | 202 | 107 | 308 | 4.94e-84 | 270 |
| Msa0868210 | AT3G20770.1 | 55.310 | 226 | 99 | 2 | 1 | 225 | 106 | 330 | 2.49e-83 | 269 |
| Msa0868210 | AT1G73730.2 | 52.101 | 238 | 97 | 4 | 1 | 228 | 85 | 315 | 4.41e-79 | 256 |
| Msa0868210 | AT1G73730.1 | 52.101 | 238 | 97 | 4 | 1 | 228 | 97 | 327 | 5.46e-79 | 256 |
| Msa0868210 | AT5G10120.1 | 49.495 | 198 | 94 | 2 | 1 | 194 | 80 | 275 | 1.09e-65 | 219 |
| Msa0868210 | AT5G65100.1 | 48.485 | 198 | 100 | 2 | 1 | 196 | 110 | 307 | 5.74e-64 | 216 |
| Msa0868210 | AT5G21120.3 | 44.872 | 234 | 118 | 4 | 2 | 225 | 109 | 341 | 1.33e-63 | 214 |
| Msa0868210 | AT5G21120.1 | 44.872 | 234 | 118 | 4 | 2 | 225 | 109 | 341 | 1.33e-63 | 214 |
| Msa0868210 | AT5G21120.2 | 44.872 | 234 | 118 | 4 | 2 | 225 | 116 | 348 | 1.43e-63 | 214 |
Find 99 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACATTCTTCTTCATATT+TGG | 0.127902 | 6_1:+1726982 | None:intergenic |
| AAGGAGAAGATGTTTCTATT+TGG | 0.240323 | 6_1:-1725753 | Msa0868210:CDS |
| GAAGAATTTAAGAATGATTC+AGG | 0.273405 | 6_1:+1726527 | None:intergenic |
| ATGCTAAGGACACAGCTATT+TGG | 0.278587 | 6_1:-1726595 | Msa0868210:CDS |
| CTCCTGATCTTCTGAAAATT+AGG | 0.282984 | 6_1:+1726656 | None:intergenic |
| TGTTGCTGCTTCCTCCTATT+TGG | 0.284096 | 6_1:+1726246 | None:intergenic |
| CCATTTGAGGCTGCATGTTT+TGG | 0.285639 | 6_1:+1725635 | None:intergenic |
| CACATGATTTGAAGAAGGTT+TGG | 0.299071 | 6_1:-1726718 | Msa0868210:CDS |
| CAACTCCAACCATTTGGAAT+TGG | 0.333568 | 6_1:+1726219 | None:intergenic |
| TAGCTTGGTGTTGCCACATT+AGG | 0.335351 | 6_1:+1725421 | None:intergenic |
| AGCTTCCAACTCCAACCATT+TGG | 0.359268 | 6_1:+1726213 | None:intergenic |
| GATGTTCATGGCTTCGTCTA+TGG | 0.359821 | 6_1:-1727109 | Msa0868210:CDS |
| CAAACCAATGATTGGCTCTT+CGG | 0.371062 | 6_1:-1727068 | Msa0868210:CDS |
| ATTGAACCTAATATTGTATC+AGG | 0.373081 | 6_1:+1726893 | None:intergenic |
| ATCATTGGTTTGCCATTGTC+AGG | 0.373218 | 6_1:+1727079 | None:intergenic |
| CGAATCATGGTGGAAGGAAA+TGG | 0.374307 | 6_1:-1726780 | Msa0868210:CDS |
| CCTCCACCATGGTGGCCAAC+AGG | 0.377036 | 6_1:-1726806 | Msa0868210:CDS |
| GACCTACCTGATACAATATT+AGG | 0.387617 | 6_1:-1726899 | Msa0868210:CDS |
| TCATATTTGGCGATTGCAGC+TGG | 0.389765 | 6_1:+1726995 | None:intergenic |
| AAGAGAAAGGCTGACCAAAT+AGG | 0.390964 | 6_1:-1726260 | Msa0868210:CDS |
| TTCTTAAATTCTTCTTGTGT+TGG | 0.395347 | 6_1:-1726518 | Msa0868210:CDS |
| GTTGGAATCATGTTGGTAAC+TGG | 0.408033 | 6_1:+1725670 | None:intergenic |
| TAGAAATTCTGCTCCATTTG+AGG | 0.408160 | 6_1:+1725622 | None:intergenic |
| CCAAAACATGCAGCCTCAAA+TGG | 0.411657 | 6_1:-1725635 | Msa0868210:CDS |
| CCCTCATCACATGATGATAA+AGG | 0.413199 | 6_1:+1726425 | None:intergenic |
| TATTAGTTATGAAGAAAGAT+TGG | 0.415453 | 6_1:-1726564 | Msa0868210:CDS |
| ACCCCAAAGAAAACATCCTT+TGG | 0.424688 | 6_1:-1726840 | Msa0868210:CDS |
| CGGAAAATCTACGCGGTTGG+TGG | 0.429144 | 6_1:-1727048 | Msa0868210:CDS |
| CAATCTTGTTATTGAGAGTA+GGG | 0.434145 | 6_1:-1726291 | Msa0868210:CDS |
| GGAGTATTGTTAGACATTCC+AGG | 0.438919 | 6_1:-1726637 | Msa0868210:CDS |
| ATCTGATGTTGATGAGTTGA+TGG | 0.442216 | 6_1:-1725458 | Msa0868210:CDS |
| TGAAAGTAGTTATGAGTTTG+TGG | 0.453514 | 6_1:-1726495 | Msa0868210:CDS |
| GAAGGAAATGGGATTTAGTA+AGG | 0.462346 | 6_1:-1726768 | Msa0868210:CDS |
| AGAAGATGTTTCTATTTGGA+TGG | 0.464894 | 6_1:-1725749 | Msa0868210:CDS |
| ACATTAACAACTTCAGCATT+AGG | 0.465031 | 6_1:+1725556 | None:intergenic |
| CACCATGATTCGTTCCCTGT+TGG | 0.467429 | 6_1:+1726791 | None:intergenic |
| GACAATGGCAAACCAATGAT+TGG | 0.467907 | 6_1:-1727076 | Msa0868210:CDS |
| AAAACCACATGATTTGAAGA+AGG | 0.473630 | 6_1:-1726723 | Msa0868210:CDS |
| TGTTGCTTGATGAGCAAGTA+AGG | 0.474666 | 6_1:-1726937 | Msa0868210:CDS |
| CAATTCCAAATGGTTGGAGT+TGG | 0.477252 | 6_1:-1726218 | Msa0868210:CDS |
| GGCCAACAGGGAACGAATCA+TGG | 0.488109 | 6_1:-1726793 | Msa0868210:CDS |
| ACCAACATGATTCCAACTCC+TGG | 0.488765 | 6_1:-1725664 | Msa0868210:CDS |
| GCAAAATAAATTCAATGCTA+AGG | 0.497897 | 6_1:-1726609 | Msa0868210:CDS |
| CCTGTTGGCCACCATGGTGG+AGG | 0.500513 | 6_1:+1726806 | None:intergenic |
| AAAGTAAACTTTGAGGAAAA+CGG | 0.500540 | 6_1:-1727019 | Msa0868210:CDS |
| GTACTGCAGCTTGCTGATGT+TGG | 0.509106 | 6_1:+1726159 | None:intergenic |
| GGTAGGTCATACAAGGAGTA+AGG | 0.514149 | 6_1:+1726914 | None:intergenic |
| GAATCATGGTGGAAGGAAAT+GGG | 0.515364 | 6_1:-1726779 | Msa0868210:CDS |
| TTGGAAAATTTGTGTGTTGA+CGG | 0.518161 | 6_1:-1726699 | Msa0868210:CDS |
| AACAACCAATTCCAAATGGT+TGG | 0.519990 | 6_1:-1726224 | Msa0868210:CDS |
| AAATCTACGCGGTTGGTGGA+AGG | 0.522592 | 6_1:-1727044 | Msa0868210:CDS |
| AACTGGCACAACATGATTCA+CGG | 0.524808 | 6_1:+1725687 | None:intergenic |
| CAAACCTTCTTCAAATCATG+TGG | 0.527454 | 6_1:+1726719 | None:intergenic |
| CAACAACAACCAATTCCAAA+TGG | 0.529692 | 6_1:-1726228 | Msa0868210:CDS |
| AACCTCCATGATGATTGTCT+TGG | 0.533086 | 6_1:+1726324 | None:intergenic |
| GTGATCTGATTTGCAACAGC+AGG | 0.537097 | 6_1:+1726137 | None:intergenic |
| GGATCAGTTTCAACAGTGAA+TGG | 0.537851 | 6_1:-1726962 | Msa0868210:CDS |
| ACCTTTATCATCATGTGATG+AGG | 0.538023 | 6_1:-1726426 | Msa0868210:CDS |
| ACAATCTTGTTATTGAGAGT+AGG | 0.541787 | 6_1:-1726292 | Msa0868210:CDS |
| CTCATCAAGAGATGAATCAA+AGG | 0.542544 | 6_1:+1725501 | None:intergenic |
| CCTTTATCATCATGTGATGA+GGG | 0.544805 | 6_1:-1726425 | Msa0868210:CDS |
| GGCTAAGAGAAATCATAGCT+TGG | 0.544968 | 6_1:+1725406 | None:intergenic |
| GTATAATTCATGTATTGAGA+TGG | 0.547425 | 6_1:-1725722 | Msa0868210:CDS |
| CAGAATTTCTATGATCAACA+AGG | 0.550654 | 6_1:-1725610 | Msa0868210:CDS |
| TAGGGGTGCTAATAAGAGAA+AGG | 0.554483 | 6_1:-1726273 | Msa0868210:CDS |
| CTTCGGAAAATCTACGCGGT+TGG | 0.564527 | 6_1:-1727051 | Msa0868210:CDS |
| AATCAGATCACTATTCATGC+AGG | 0.564840 | 6_1:-1726125 | Msa0868210:intron |
| TCGTTCCCTGTTGGCCACCA+TGG | 0.567749 | 6_1:+1726800 | None:intergenic |
| TGATGATTGTCTTGGTAATG+TGG | 0.571675 | 6_1:+1726332 | None:intergenic |
| GAAGGACAAAGTAAACTTTG+AGG | 0.573836 | 6_1:-1727026 | Msa0868210:CDS |
| GGAGGAATGCCGCTTTCCAA+AGG | 0.574058 | 6_1:+1726824 | None:intergenic |
| CTCCACCATGGTGGCCAACA+GGG | 0.575877 | 6_1:-1726805 | Msa0868210:CDS |
| TTCCCTGTTGGCCACCATGG+TGG | 0.581079 | 6_1:+1726803 | None:intergenic |
| TTCAAGTTGATCAACCATGT+TGG | 0.584606 | 6_1:+1726394 | None:intergenic |
| ATTTATTGACTCTCCTAATG+TGG | 0.589515 | 6_1:-1725434 | Msa0868210:CDS |
| TACCATGCAGGTAATGACTC+AGG | 0.590669 | 6_1:-1725778 | Msa0868210:intron |
| TGTATCAGGTAGGTCATACA+AGG | 0.591621 | 6_1:+1726907 | None:intergenic |
| CATTACCAAGACAATCATCA+TGG | 0.594402 | 6_1:-1726329 | Msa0868210:CDS |
| AGAAAACATCCTTTGGAAAG+CGG | 0.596755 | 6_1:-1726833 | Msa0868210:CDS |
| GCTTGCTGATGTTGGTCAAG+AGG | 0.599308 | 6_1:+1726167 | None:intergenic |
| TCCAGGAGTTGGAATCATGT+TGG | 0.604429 | 6_1:+1725663 | None:intergenic |
| AGGGAACGAATCATGGTGGA+AGG | 0.608968 | 6_1:-1726786 | Msa0868210:CDS |
| GCCAAATATGAAGAAGAATG+TGG | 0.610704 | 6_1:-1726983 | Msa0868210:CDS |
| GCAGGTAATGACTCAGGAGA+AGG | 0.617966 | 6_1:-1725772 | Msa0868210:intron |
| AGAAAGGCTGACCAAATAGG+AGG | 0.621759 | 6_1:-1726257 | Msa0868210:CDS |
| AGAATTTCTATGATCAACAA+GGG | 0.625036 | 6_1:-1725609 | Msa0868210:CDS |
| AATCTTGTTATTGAGAGTAG+GGG | 0.639924 | 6_1:-1726290 | Msa0868210:CDS |
| AGCTCAAAGAATCAACAACA+TGG | 0.679952 | 6_1:-1726194 | Msa0868210:CDS |
| GCGGCATTCCTCCACCATGG+TGG | 0.682914 | 6_1:-1726814 | Msa0868210:CDS |
| AACCTAATATTGTATCAGGT+AGG | 0.686602 | 6_1:+1726897 | None:intergenic |
| GAATTTCTATGATCAACAAG+GGG | 0.696998 | 6_1:-1725608 | Msa0868210:CDS |
| GGAAACAGATGATTATGATG+TGG | 0.698666 | 6_1:-1726474 | Msa0868210:CDS |
| TATGGAGTAGTACCTGACAA+TGG | 0.702873 | 6_1:-1727091 | Msa0868210:CDS |
| AAAGCGGCATTCCTCCACCA+TGG | 0.708484 | 6_1:-1726817 | Msa0868210:CDS |
| TACCAAGACAATCATCATGG+AGG | 0.740488 | 6_1:-1726326 | Msa0868210:CDS |
| GGCTCTTCGGAAAATCTACG+CGG | 0.742332 | 6_1:-1727055 | Msa0868210:CDS |
| CAACAGGGAACGAATCATGG+TGG | 0.754137 | 6_1:-1726790 | Msa0868210:CDS |
| TGGCACAACATGATTCACGG+TGG | 0.797759 | 6_1:+1725690 | None:intergenic |
| TGAGGGTTCTGATACCAACA+TGG | 0.812240 | 6_1:-1726408 | Msa0868210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTACTTAAAAACTAGTTTTT+AGG | - | chr6_1:1726562-1726581 | Msa0868210:CDS | 15.0% |
| !!! | TACTTAAAAACTAGTTTTTA+GGG | - | chr6_1:1726563-1726582 | Msa0868210:CDS | 15.0% |
| !!! | TTACTTAAAAACTAGTTTTT+AGG | - | chr6_1:1726562-1726581 | Msa0868210:CDS | 15.0% |
| !!! | TACTTAAAAACTAGTTTTTA+GGG | - | chr6_1:1726563-1726582 | Msa0868210:CDS | 15.0% |
| !! | TATTAGTTATGAAGAAAGAT+TGG | - | chr6_1:1725968-1725987 | Msa0868210:intron | 20.0% |
| !! | TATTAGTTATGAAGAAAGAT+TGG | - | chr6_1:1725968-1725987 | Msa0868210:intron | 20.0% |
| !! | AAAGTAAACTTTGAGGAAAA+CGG | - | chr6_1:1725513-1725532 | Msa0868210:CDS | 25.0% |
| ! | ATTGAACCTAATATTGTATC+AGG | + | chr6_1:1725642-1725661 | None:intergenic | 25.0% |
| !!! | AAATCATGTGGTTTTTTGTA+TGG | + | chr6_1:1725804-1725823 | None:intergenic | 25.0% |
| ! | GCAAAATAAATTCAATGCTA+AGG | - | chr6_1:1725923-1725942 | Msa0868210:intron | 25.0% |
| ! | GAAGAATTTAAGAATGATTC+AGG | + | chr6_1:1726008-1726027 | None:intergenic | 25.0% |
| ! | TTCTTAAATTCTTCTTGTGT+TGG | - | chr6_1:1726014-1726033 | Msa0868210:intron | 25.0% |
| !! | TTTTTCATATGTAAGTAGCT+CGG | + | chr6_1:1726647-1726666 | None:intergenic | 25.0% |
| ! | GTATAATTCATGTATTGAGA+TGG | - | chr6_1:1726810-1726829 | Msa0868210:CDS | 25.0% |
| ! | AGAATTTCTATGATCAACAA+GGG | - | chr6_1:1726923-1726942 | Msa0868210:CDS | 25.0% |
| !! | AAAGTAAACTTTGAGGAAAA+CGG | - | chr6_1:1725513-1725532 | Msa0868210:CDS | 25.0% |
| ! | ATTGAACCTAATATTGTATC+AGG | + | chr6_1:1725642-1725661 | None:intergenic | 25.0% |
| !!! | AAATCATGTGGTTTTTTGTA+TGG | + | chr6_1:1725804-1725823 | None:intergenic | 25.0% |
| ! | GCAAAATAAATTCAATGCTA+AGG | - | chr6_1:1725923-1725942 | Msa0868210:intron | 25.0% |
| ! | GAAGAATTTAAGAATGATTC+AGG | + | chr6_1:1726008-1726027 | None:intergenic | 25.0% |
| ! | TTCTTAAATTCTTCTTGTGT+TGG | - | chr6_1:1726014-1726033 | Msa0868210:intron | 25.0% |
| !! | TTTTTCATATGTAAGTAGCT+CGG | + | chr6_1:1726647-1726666 | None:intergenic | 25.0% |
| ! | GTATAATTCATGTATTGAGA+TGG | - | chr6_1:1726810-1726829 | Msa0868210:CDS | 25.0% |
| ! | AGAATTTCTATGATCAACAA+GGG | - | chr6_1:1726923-1726942 | Msa0868210:CDS | 25.0% |
| TCCACATTCTTCTTCATATT+TGG | + | chr6_1:1725553-1725572 | None:intergenic | 30.0% | |
| AACCTAATATTGTATCAGGT+AGG | + | chr6_1:1725638-1725657 | None:intergenic | 30.0% | |
| ! | TTCCAAAGGATGTTTTCTTT+GGG | + | chr6_1:1725697-1725716 | None:intergenic | 30.0% |
| ! | TTTCCAAAGGATGTTTTCTT+TGG | + | chr6_1:1725698-1725717 | None:intergenic | 30.0% |
| AAAACCACATGATTTGAAGA+AGG | - | chr6_1:1725809-1725828 | Msa0868210:intron | 30.0% | |
| TTGGAAAATTTGTGTGTTGA+CGG | - | chr6_1:1725833-1725852 | Msa0868210:intron | 30.0% | |
| TGAAAGTAGTTATGAGTTTG+TGG | - | chr6_1:1726037-1726056 | Msa0868210:intron | 30.0% | |
| !! | ACAATCTTGTTATTGAGAGT+AGG | - | chr6_1:1726240-1726259 | Msa0868210:CDS | 30.0% |
| !! | CAATCTTGTTATTGAGAGTA+GGG | - | chr6_1:1726241-1726260 | Msa0868210:CDS | 30.0% |
| !! | AATCTTGTTATTGAGAGTAG+GGG | - | chr6_1:1726242-1726261 | Msa0868210:CDS | 30.0% |
| ATGCATGACAAATGTAGATA+GGG | + | chr6_1:1726522-1726541 | None:intergenic | 30.0% | |
| ! | AAGGAGAAGATGTTTCTATT+TGG | - | chr6_1:1726779-1726798 | Msa0868210:CDS | 30.0% |
| ! | AGAAGATGTTTCTATTTGGA+TGG | - | chr6_1:1726783-1726802 | Msa0868210:CDS | 30.0% |
| CAGAATTTCTATGATCAACA+AGG | - | chr6_1:1726922-1726941 | Msa0868210:CDS | 30.0% | |
| GAATTTCTATGATCAACAAG+GGG | - | chr6_1:1726924-1726943 | Msa0868210:CDS | 30.0% | |
| ACATTAACAACTTCAGCATT+AGG | + | chr6_1:1726979-1726998 | None:intergenic | 30.0% | |
| ! | ATTGAGACATTTTCATGCAT+TGG | + | chr6_1:1727003-1727022 | None:intergenic | 30.0% |
| !! | ATTTATTGACTCTCCTAATG+TGG | - | chr6_1:1727098-1727117 | Msa0868210:CDS | 30.0% |
| TCCACATTCTTCTTCATATT+TGG | + | chr6_1:1725553-1725572 | None:intergenic | 30.0% | |
| AACCTAATATTGTATCAGGT+AGG | + | chr6_1:1725638-1725657 | None:intergenic | 30.0% | |
| ! | TTCCAAAGGATGTTTTCTTT+GGG | + | chr6_1:1725697-1725716 | None:intergenic | 30.0% |
| ! | TTTCCAAAGGATGTTTTCTT+TGG | + | chr6_1:1725698-1725717 | None:intergenic | 30.0% |
| AAAACCACATGATTTGAAGA+AGG | - | chr6_1:1725809-1725828 | Msa0868210:intron | 30.0% | |
| TTGGAAAATTTGTGTGTTGA+CGG | - | chr6_1:1725833-1725852 | Msa0868210:intron | 30.0% | |
| TGAAAGTAGTTATGAGTTTG+TGG | - | chr6_1:1726037-1726056 | Msa0868210:intron | 30.0% | |
| !! | ACAATCTTGTTATTGAGAGT+AGG | - | chr6_1:1726240-1726259 | Msa0868210:CDS | 30.0% |
| !! | CAATCTTGTTATTGAGAGTA+GGG | - | chr6_1:1726241-1726260 | Msa0868210:CDS | 30.0% |
| !! | AATCTTGTTATTGAGAGTAG+GGG | - | chr6_1:1726242-1726261 | Msa0868210:CDS | 30.0% |
| ATGCATGACAAATGTAGATA+GGG | + | chr6_1:1726522-1726541 | None:intergenic | 30.0% | |
| ! | AAGGAGAAGATGTTTCTATT+TGG | - | chr6_1:1726779-1726798 | Msa0868210:CDS | 30.0% |
| ! | AGAAGATGTTTCTATTTGGA+TGG | - | chr6_1:1726783-1726802 | Msa0868210:CDS | 30.0% |
| CAGAATTTCTATGATCAACA+AGG | - | chr6_1:1726922-1726941 | Msa0868210:CDS | 30.0% | |
| GAATTTCTATGATCAACAAG+GGG | - | chr6_1:1726924-1726943 | Msa0868210:CDS | 30.0% | |
| ACATTAACAACTTCAGCATT+AGG | + | chr6_1:1726979-1726998 | None:intergenic | 30.0% | |
| ! | ATTGAGACATTTTCATGCAT+TGG | + | chr6_1:1727003-1727022 | None:intergenic | 30.0% |
| !! | ATTTATTGACTCTCCTAATG+TGG | - | chr6_1:1727098-1727117 | Msa0868210:CDS | 30.0% |
| ! | GTGGAATTTTGTGATGTTCA+TGG | - | chr6_1:1725411-1725430 | Msa0868210:CDS | 35.0% |
| GAAGGACAAAGTAAACTTTG+AGG | - | chr6_1:1725506-1725525 | Msa0868210:CDS | 35.0% | |
| GCCAAATATGAAGAAGAATG+TGG | - | chr6_1:1725549-1725568 | Msa0868210:CDS | 35.0% | |
| GACCTACCTGATACAATATT+AGG | - | chr6_1:1725633-1725652 | Msa0868210:CDS | 35.0% | |
| ! | TCCAAAGGATGTTTTCTTTG+GGG | + | chr6_1:1725696-1725715 | None:intergenic | 35.0% |
| ! | AGAAAACATCCTTTGGAAAG+CGG | - | chr6_1:1725699-1725718 | Msa0868210:CDS | 35.0% |
| GAAGGAAATGGGATTTAGTA+AGG | - | chr6_1:1725764-1725783 | Msa0868210:CDS | 35.0% | |
| !!! | TCATGTGGTTTTTTGTATGG+TGG | + | chr6_1:1725801-1725820 | None:intergenic | 35.0% |
| CAAACCTTCTTCAAATCATG+TGG | + | chr6_1:1725816-1725835 | None:intergenic | 35.0% | |
| CACATGATTTGAAGAAGGTT+TGG | - | chr6_1:1725814-1725833 | Msa0868210:intron | 35.0% | |
| ! | CTCCTAATTTTCAGAAGATC+AGG | - | chr6_1:1725874-1725893 | Msa0868210:intron | 35.0% |
| ! | CTCCTGATCTTCTGAAAATT+AGG | + | chr6_1:1725879-1725898 | None:intergenic | 35.0% |
| !!! | GAATTTATTTTGCAAGCTCC+TGG | + | chr6_1:1725916-1725935 | None:intergenic | 35.0% |
| GGAAACAGATGATTATGATG+TGG | - | chr6_1:1726058-1726077 | Msa0868210:intron | 35.0% | |
| ACCTTTATCATCATGTGATG+AGG | - | chr6_1:1726106-1726125 | Msa0868210:intron | 35.0% | |
| CCTTTATCATCATGTGATGA+GGG | - | chr6_1:1726107-1726126 | Msa0868210:intron | 35.0% | |
| !! | TTCAAGTTGATCAACCATGT+TGG | + | chr6_1:1726141-1726160 | None:intergenic | 35.0% |
| !! | TGATGATTGTCTTGGTAATG+TGG | + | chr6_1:1726203-1726222 | None:intergenic | 35.0% |
| CATTACCAAGACAATCATCA+TGG | - | chr6_1:1726203-1726222 | Msa0868210:CDS | 35.0% | |
| CAACAACAACCAATTCCAAA+TGG | - | chr6_1:1726304-1726323 | Msa0868210:CDS | 35.0% | |
| AACAACCAATTCCAAATGGT+TGG | - | chr6_1:1726308-1726327 | Msa0868210:CDS | 35.0% | |
| AGCTCAAAGAATCAACAACA+TGG | - | chr6_1:1726338-1726357 | Msa0868210:CDS | 35.0% | |
| AATCAGATCACTATTCATGC+AGG | - | chr6_1:1726407-1726426 | Msa0868210:CDS | 35.0% | |
| ACTATTCATGCAGGTAATCA+TGG | - | chr6_1:1726416-1726435 | Msa0868210:CDS | 35.0% | |
| GATGCATGACAAATGTAGAT+AGG | + | chr6_1:1726523-1726542 | None:intergenic | 35.0% | |
| ! | TCTTGATTTGATTACCATGC+AGG | - | chr6_1:1726742-1726761 | Msa0868210:CDS | 35.0% |
| !! | TTTTGGTTAAATCCAGGAGT+TGG | + | chr6_1:1726883-1726902 | None:intergenic | 35.0% |
| !!! | TGCATGTTTTGGTTAAATCC+AGG | + | chr6_1:1726889-1726908 | None:intergenic | 35.0% |
| TAGAAATTCTGCTCCATTTG+AGG | + | chr6_1:1726913-1726932 | None:intergenic | 35.0% | |
| CTCATCAAGAGATGAATCAA+AGG | + | chr6_1:1727034-1727053 | None:intergenic | 35.0% | |
| ! | ATCTGATGTTGATGAGTTGA+TGG | - | chr6_1:1727074-1727093 | Msa0868210:CDS | 35.0% |
| ! | GTGGAATTTTGTGATGTTCA+TGG | - | chr6_1:1725411-1725430 | Msa0868210:CDS | 35.0% |
| GAAGGACAAAGTAAACTTTG+AGG | - | chr6_1:1725506-1725525 | Msa0868210:CDS | 35.0% | |
| GCCAAATATGAAGAAGAATG+TGG | - | chr6_1:1725549-1725568 | Msa0868210:CDS | 35.0% | |
| GACCTACCTGATACAATATT+AGG | - | chr6_1:1725633-1725652 | Msa0868210:CDS | 35.0% | |
| ! | TCCAAAGGATGTTTTCTTTG+GGG | + | chr6_1:1725696-1725715 | None:intergenic | 35.0% |
| ! | AGAAAACATCCTTTGGAAAG+CGG | - | chr6_1:1725699-1725718 | Msa0868210:CDS | 35.0% |
| GAAGGAAATGGGATTTAGTA+AGG | - | chr6_1:1725764-1725783 | Msa0868210:CDS | 35.0% | |
| !!! | TCATGTGGTTTTTTGTATGG+TGG | + | chr6_1:1725801-1725820 | None:intergenic | 35.0% |
| CAAACCTTCTTCAAATCATG+TGG | + | chr6_1:1725816-1725835 | None:intergenic | 35.0% | |
| CACATGATTTGAAGAAGGTT+TGG | - | chr6_1:1725814-1725833 | Msa0868210:intron | 35.0% | |
| ! | CTCCTAATTTTCAGAAGATC+AGG | - | chr6_1:1725874-1725893 | Msa0868210:intron | 35.0% |
| ! | CTCCTGATCTTCTGAAAATT+AGG | + | chr6_1:1725879-1725898 | None:intergenic | 35.0% |
| !!! | GAATTTATTTTGCAAGCTCC+TGG | + | chr6_1:1725916-1725935 | None:intergenic | 35.0% |
| GGAAACAGATGATTATGATG+TGG | - | chr6_1:1726058-1726077 | Msa0868210:intron | 35.0% | |
| ACCTTTATCATCATGTGATG+AGG | - | chr6_1:1726106-1726125 | Msa0868210:intron | 35.0% | |
| CCTTTATCATCATGTGATGA+GGG | - | chr6_1:1726107-1726126 | Msa0868210:intron | 35.0% | |
| !! | TTCAAGTTGATCAACCATGT+TGG | + | chr6_1:1726141-1726160 | None:intergenic | 35.0% |
| !! | TGATGATTGTCTTGGTAATG+TGG | + | chr6_1:1726203-1726222 | None:intergenic | 35.0% |
| CATTACCAAGACAATCATCA+TGG | - | chr6_1:1726203-1726222 | Msa0868210:CDS | 35.0% | |
| CAACAACAACCAATTCCAAA+TGG | - | chr6_1:1726304-1726323 | Msa0868210:CDS | 35.0% | |
| AACAACCAATTCCAAATGGT+TGG | - | chr6_1:1726308-1726327 | Msa0868210:CDS | 35.0% | |
| AGCTCAAAGAATCAACAACA+TGG | - | chr6_1:1726338-1726357 | Msa0868210:CDS | 35.0% | |
| AATCAGATCACTATTCATGC+AGG | - | chr6_1:1726407-1726426 | Msa0868210:CDS | 35.0% | |
| ACTATTCATGCAGGTAATCA+TGG | - | chr6_1:1726416-1726435 | Msa0868210:CDS | 35.0% | |
| GATGCATGACAAATGTAGAT+AGG | + | chr6_1:1726523-1726542 | None:intergenic | 35.0% | |
| ! | TCTTGATTTGATTACCATGC+AGG | - | chr6_1:1726742-1726761 | Msa0868210:CDS | 35.0% |
| !! | TTTTGGTTAAATCCAGGAGT+TGG | + | chr6_1:1726883-1726902 | None:intergenic | 35.0% |
| !!! | TGCATGTTTTGGTTAAATCC+AGG | + | chr6_1:1726889-1726908 | None:intergenic | 35.0% |
| TAGAAATTCTGCTCCATTTG+AGG | + | chr6_1:1726913-1726932 | None:intergenic | 35.0% | |
| CTCATCAAGAGATGAATCAA+AGG | + | chr6_1:1727034-1727053 | None:intergenic | 35.0% | |
| ! | ATCTGATGTTGATGAGTTGA+TGG | - | chr6_1:1727074-1727093 | Msa0868210:CDS | 35.0% |
| TATGGAGTAGTACCTGACAA+TGG | - | chr6_1:1725441-1725460 | Msa0868210:CDS | 40.0% | |
| !! | ATCATTGGTTTGCCATTGTC+AGG | + | chr6_1:1725456-1725475 | None:intergenic | 40.0% |
| GACAATGGCAAACCAATGAT+TGG | - | chr6_1:1725456-1725475 | Msa0868210:CDS | 40.0% | |
| ! | CAAACCAATGATTGGCTCTT+CGG | - | chr6_1:1725464-1725483 | Msa0868210:CDS | 40.0% |
| ! | TTTTCCGAAGAGCCAATCAT+TGG | + | chr6_1:1725471-1725490 | None:intergenic | 40.0% |
| GGATCAGTTTCAACAGTGAA+TGG | - | chr6_1:1725570-1725589 | Msa0868210:CDS | 40.0% | |
| ! | TGTTGCTTGATGAGCAAGTA+AGG | - | chr6_1:1725595-1725614 | Msa0868210:CDS | 40.0% |
| TGTATCAGGTAGGTCATACA+AGG | + | chr6_1:1725628-1725647 | None:intergenic | 40.0% | |
| !! | AAAGGATGTTTTCTTTGGGG+TGG | + | chr6_1:1725693-1725712 | None:intergenic | 40.0% |
| ACCCCAAAGAAAACATCCTT+TGG | - | chr6_1:1725692-1725711 | Msa0868210:CDS | 40.0% | |
| ! | GAATCATGGTGGAAGGAAAT+GGG | - | chr6_1:1725753-1725772 | Msa0868210:CDS | 40.0% |
| !!! | GTGGTTTTTTGTATGGTGGT+GGG | + | chr6_1:1725797-1725816 | None:intergenic | 40.0% |
| !!! | TGTGGTTTTTTGTATGGTGG+TGG | + | chr6_1:1725798-1725817 | None:intergenic | 40.0% |
| !! | GGAGTATTGTTAGACATTCC+AGG | - | chr6_1:1725895-1725914 | Msa0868210:intron | 40.0% |
| ATGCTAAGGACACAGCTATT+TGG | - | chr6_1:1725937-1725956 | Msa0868210:intron | 40.0% | |
| CCCTCATCACATGATGATAA+AGG | + | chr6_1:1726110-1726129 | None:intergenic | 40.0% | |
| TACCAAGACAATCATCATGG+AGG | - | chr6_1:1726206-1726225 | Msa0868210:CDS | 40.0% | |
| AACCTCCATGATGATTGTCT+TGG | + | chr6_1:1726211-1726230 | None:intergenic | 40.0% | |
| !! | TAGGGGTGCTAATAAGAGAA+AGG | - | chr6_1:1726259-1726278 | Msa0868210:CDS | 40.0% |
| AAGAGAAAGGCTGACCAAAT+AGG | - | chr6_1:1726272-1726291 | Msa0868210:CDS | 40.0% | |
| ! | CAACTCCAACCATTTGGAAT+TGG | + | chr6_1:1726316-1726335 | None:intergenic | 40.0% |
| CAATTCCAAATGGTTGGAGT+TGG | - | chr6_1:1726314-1726333 | Msa0868210:CDS | 40.0% | |
| TCATATGTAAGTAGCTCGGT+TGG | + | chr6_1:1726643-1726662 | None:intergenic | 40.0% | |
| AACTGGCACAACATGATTCA+CGG | + | chr6_1:1726848-1726867 | None:intergenic | 40.0% | |
| !! | GTTGGAATCATGTTGGTAAC+TGG | + | chr6_1:1726865-1726884 | None:intergenic | 40.0% |
| TATGGAGTAGTACCTGACAA+TGG | - | chr6_1:1725441-1725460 | Msa0868210:CDS | 40.0% | |
| !! | ATCATTGGTTTGCCATTGTC+AGG | + | chr6_1:1725456-1725475 | None:intergenic | 40.0% |
| GACAATGGCAAACCAATGAT+TGG | - | chr6_1:1725456-1725475 | Msa0868210:CDS | 40.0% | |
| ! | CAAACCAATGATTGGCTCTT+CGG | - | chr6_1:1725464-1725483 | Msa0868210:CDS | 40.0% |
| ! | TTTTCCGAAGAGCCAATCAT+TGG | + | chr6_1:1725471-1725490 | None:intergenic | 40.0% |
| GGATCAGTTTCAACAGTGAA+TGG | - | chr6_1:1725570-1725589 | Msa0868210:CDS | 40.0% | |
| ! | TGTTGCTTGATGAGCAAGTA+AGG | - | chr6_1:1725595-1725614 | Msa0868210:CDS | 40.0% |
| TGTATCAGGTAGGTCATACA+AGG | + | chr6_1:1725628-1725647 | None:intergenic | 40.0% | |
| !! | AAAGGATGTTTTCTTTGGGG+TGG | + | chr6_1:1725693-1725712 | None:intergenic | 40.0% |
| ACCCCAAAGAAAACATCCTT+TGG | - | chr6_1:1725692-1725711 | Msa0868210:CDS | 40.0% | |
| ! | GAATCATGGTGGAAGGAAAT+GGG | - | chr6_1:1725753-1725772 | Msa0868210:CDS | 40.0% |
| !!! | GTGGTTTTTTGTATGGTGGT+GGG | + | chr6_1:1725797-1725816 | None:intergenic | 40.0% |
| !!! | TGTGGTTTTTTGTATGGTGG+TGG | + | chr6_1:1725798-1725817 | None:intergenic | 40.0% |
| !! | GGAGTATTGTTAGACATTCC+AGG | - | chr6_1:1725895-1725914 | Msa0868210:intron | 40.0% |
| ATGCTAAGGACACAGCTATT+TGG | - | chr6_1:1725937-1725956 | Msa0868210:intron | 40.0% | |
| CCCTCATCACATGATGATAA+AGG | + | chr6_1:1726110-1726129 | None:intergenic | 40.0% | |
| TACCAAGACAATCATCATGG+AGG | - | chr6_1:1726206-1726225 | Msa0868210:CDS | 40.0% | |
| AACCTCCATGATGATTGTCT+TGG | + | chr6_1:1726211-1726230 | None:intergenic | 40.0% | |
| !! | TAGGGGTGCTAATAAGAGAA+AGG | - | chr6_1:1726259-1726278 | Msa0868210:CDS | 40.0% |
| AAGAGAAAGGCTGACCAAAT+AGG | - | chr6_1:1726272-1726291 | Msa0868210:CDS | 40.0% | |
| ! | CAACTCCAACCATTTGGAAT+TGG | + | chr6_1:1726316-1726335 | None:intergenic | 40.0% |
| CAATTCCAAATGGTTGGAGT+TGG | - | chr6_1:1726314-1726333 | Msa0868210:CDS | 40.0% | |
| TCATATGTAAGTAGCTCGGT+TGG | + | chr6_1:1726643-1726662 | None:intergenic | 40.0% | |
| AACTGGCACAACATGATTCA+CGG | + | chr6_1:1726848-1726867 | None:intergenic | 40.0% | |
| !! | GTTGGAATCATGTTGGTAAC+TGG | + | chr6_1:1726865-1726884 | None:intergenic | 40.0% |
| GATGTTCATGGCTTCGTCTA+TGG | - | chr6_1:1725423-1725442 | Msa0868210:CDS | 45.0% | |
| TCATATTTGGCGATTGCAGC+TGG | + | chr6_1:1725540-1725559 | None:intergenic | 45.0% | |
| GGTAGGTCATACAAGGAGTA+AGG | + | chr6_1:1725621-1725640 | None:intergenic | 45.0% | |
| ! | CGAATCATGGTGGAAGGAAA+TGG | - | chr6_1:1725752-1725771 | Msa0868210:CDS | 45.0% |
| ! | TGAGGGTTCTGATACCAACA+TGG | - | chr6_1:1726124-1726143 | Msa0868210:intron | 45.0% |
| AGAAAGGCTGACCAAATAGG+AGG | - | chr6_1:1726275-1726294 | Msa0868210:CDS | 45.0% | |
| ! | TGTTGCTGCTTCCTCCTATT+TGG | + | chr6_1:1726289-1726308 | None:intergenic | 45.0% |
| AGCTTCCAACTCCAACCATT+TGG | + | chr6_1:1726322-1726341 | None:intergenic | 45.0% | |
| ! | GTGATCTGATTTGCAACAGC+AGG | + | chr6_1:1726398-1726417 | None:intergenic | 45.0% |
| TACCATGCAGGTAATGACTC+AGG | - | chr6_1:1726754-1726773 | Msa0868210:CDS | 45.0% | |
| ACCAACATGATTCCAACTCC+TGG | - | chr6_1:1726868-1726887 | Msa0868210:CDS | 45.0% | |
| TCCAGGAGTTGGAATCATGT+TGG | + | chr6_1:1726872-1726891 | None:intergenic | 45.0% | |
| !! | CCATTTGAGGCTGCATGTTT+TGG | + | chr6_1:1726900-1726919 | None:intergenic | 45.0% |
| CCAAAACATGCAGCCTCAAA+TGG | - | chr6_1:1726897-1726916 | Msa0868210:CDS | 45.0% | |
| !! | TAGCTTGGTGTTGCCACATT+AGG | + | chr6_1:1727114-1727133 | None:intergenic | 45.0% |
| GATGTTCATGGCTTCGTCTA+TGG | - | chr6_1:1725423-1725442 | Msa0868210:CDS | 45.0% | |
| TCATATTTGGCGATTGCAGC+TGG | + | chr6_1:1725540-1725559 | None:intergenic | 45.0% | |
| GGTAGGTCATACAAGGAGTA+AGG | + | chr6_1:1725621-1725640 | None:intergenic | 45.0% | |
| ! | CGAATCATGGTGGAAGGAAA+TGG | - | chr6_1:1725752-1725771 | Msa0868210:CDS | 45.0% |
| ! | TGAGGGTTCTGATACCAACA+TGG | - | chr6_1:1726124-1726143 | Msa0868210:intron | 45.0% |
| AGAAAGGCTGACCAAATAGG+AGG | - | chr6_1:1726275-1726294 | Msa0868210:CDS | 45.0% | |
| ! | TGTTGCTGCTTCCTCCTATT+TGG | + | chr6_1:1726289-1726308 | None:intergenic | 45.0% |
| AGCTTCCAACTCCAACCATT+TGG | + | chr6_1:1726322-1726341 | None:intergenic | 45.0% | |
| ! | GTGATCTGATTTGCAACAGC+AGG | + | chr6_1:1726398-1726417 | None:intergenic | 45.0% |
| TACCATGCAGGTAATGACTC+AGG | - | chr6_1:1726754-1726773 | Msa0868210:CDS | 45.0% | |
| ACCAACATGATTCCAACTCC+TGG | - | chr6_1:1726868-1726887 | Msa0868210:CDS | 45.0% | |
| TCCAGGAGTTGGAATCATGT+TGG | + | chr6_1:1726872-1726891 | None:intergenic | 45.0% | |
| !! | CCATTTGAGGCTGCATGTTT+TGG | + | chr6_1:1726900-1726919 | None:intergenic | 45.0% |
| CCAAAACATGCAGCCTCAAA+TGG | - | chr6_1:1726897-1726916 | Msa0868210:CDS | 45.0% | |
| !! | TAGCTTGGTGTTGCCACATT+AGG | + | chr6_1:1727114-1727133 | None:intergenic | 45.0% |
| GGCTCTTCGGAAAATCTACG+CGG | - | chr6_1:1725477-1725496 | Msa0868210:CDS | 50.0% | |
| CTTCGGAAAATCTACGCGGT+TGG | - | chr6_1:1725481-1725500 | Msa0868210:CDS | 50.0% | |
| !! | AAATCTACGCGGTTGGTGGA+AGG | - | chr6_1:1725488-1725507 | Msa0868210:CDS | 50.0% |
| CACCATGATTCGTTCCCTGT+TGG | + | chr6_1:1725744-1725763 | None:intergenic | 50.0% | |
| CAACAGGGAACGAATCATGG+TGG | - | chr6_1:1725742-1725761 | Msa0868210:CDS | 50.0% | |
| ! | AGGGAACGAATCATGGTGGA+AGG | - | chr6_1:1725746-1725765 | Msa0868210:CDS | 50.0% |
| ! | GCTTGCTGATGTTGGTCAAG+AGG | + | chr6_1:1726368-1726387 | None:intergenic | 50.0% |
| !! | GTACTGCAGCTTGCTGATGT+TGG | + | chr6_1:1726376-1726395 | None:intergenic | 50.0% |
| CTCCTGAGTCATTACCTGCA+TGG | + | chr6_1:1726759-1726778 | None:intergenic | 50.0% | |
| GCAGGTAATGACTCAGGAGA+AGG | - | chr6_1:1726760-1726779 | Msa0868210:CDS | 50.0% | |
| TGGCACAACATGATTCACGG+TGG | + | chr6_1:1726845-1726864 | None:intergenic | 50.0% | |
| GGCTCTTCGGAAAATCTACG+CGG | - | chr6_1:1725477-1725496 | Msa0868210:CDS | 50.0% | |
| CTTCGGAAAATCTACGCGGT+TGG | - | chr6_1:1725481-1725500 | Msa0868210:CDS | 50.0% | |
| !! | AAATCTACGCGGTTGGTGGA+AGG | - | chr6_1:1725488-1725507 | Msa0868210:CDS | 50.0% |
| CACCATGATTCGTTCCCTGT+TGG | + | chr6_1:1725744-1725763 | None:intergenic | 50.0% | |
| CAACAGGGAACGAATCATGG+TGG | - | chr6_1:1725742-1725761 | Msa0868210:CDS | 50.0% | |
| ! | AGGGAACGAATCATGGTGGA+AGG | - | chr6_1:1725746-1725765 | Msa0868210:CDS | 50.0% |
| ! | GCTTGCTGATGTTGGTCAAG+AGG | + | chr6_1:1726368-1726387 | None:intergenic | 50.0% |
| !! | GTACTGCAGCTTGCTGATGT+TGG | + | chr6_1:1726376-1726395 | None:intergenic | 50.0% |
| CTCCTGAGTCATTACCTGCA+TGG | + | chr6_1:1726759-1726778 | None:intergenic | 50.0% | |
| GCAGGTAATGACTCAGGAGA+AGG | - | chr6_1:1726760-1726779 | Msa0868210:CDS | 50.0% | |
| TGGCACAACATGATTCACGG+TGG | + | chr6_1:1726845-1726864 | None:intergenic | 50.0% | |
| CGGAAAATCTACGCGGTTGG+TGG | - | chr6_1:1725484-1725503 | Msa0868210:CDS | 55.0% | |
| !! | GGAGGAATGCCGCTTTCCAA+AGG | + | chr6_1:1725711-1725730 | None:intergenic | 55.0% |
| AAAGCGGCATTCCTCCACCA+TGG | - | chr6_1:1725715-1725734 | Msa0868210:CDS | 55.0% | |
| GGCCAACAGGGAACGAATCA+TGG | - | chr6_1:1725739-1725758 | Msa0868210:CDS | 55.0% | |
| CGGAAAATCTACGCGGTTGG+TGG | - | chr6_1:1725484-1725503 | Msa0868210:CDS | 55.0% | |
| !! | GGAGGAATGCCGCTTTCCAA+AGG | + | chr6_1:1725711-1725730 | None:intergenic | 55.0% |
| AAAGCGGCATTCCTCCACCA+TGG | - | chr6_1:1725715-1725734 | Msa0868210:CDS | 55.0% | |
| GGCCAACAGGGAACGAATCA+TGG | - | chr6_1:1725739-1725758 | Msa0868210:CDS | 55.0% | |
| CTCCACCATGGTGGCCAACA+GGG | - | chr6_1:1725727-1725746 | Msa0868210:CDS | 60.0% | |
| TTCCCTGTTGGCCACCATGG+TGG | + | chr6_1:1725732-1725751 | None:intergenic | 60.0% | |
| TCGTTCCCTGTTGGCCACCA+TGG | + | chr6_1:1725735-1725754 | None:intergenic | 60.0% | |
| CTCCACCATGGTGGCCAACA+GGG | - | chr6_1:1725727-1725746 | Msa0868210:CDS | 60.0% | |
| TTCCCTGTTGGCCACCATGG+TGG | + | chr6_1:1725732-1725751 | None:intergenic | 60.0% | |
| TCGTTCCCTGTTGGCCACCA+TGG | + | chr6_1:1725735-1725754 | None:intergenic | 60.0% | |
| GCGGCATTCCTCCACCATGG+TGG | - | chr6_1:1725718-1725737 | Msa0868210:CDS | 65.0% | |
| CCTGTTGGCCACCATGGTGG+AGG | + | chr6_1:1725729-1725748 | None:intergenic | 65.0% | |
| CCTCCACCATGGTGGCCAAC+AGG | - | chr6_1:1725726-1725745 | Msa0868210:CDS | 65.0% | |
| GCGGCATTCCTCCACCATGG+TGG | - | chr6_1:1725718-1725737 | Msa0868210:CDS | 65.0% | |
| CCTGTTGGCCACCATGGTGG+AGG | + | chr6_1:1725729-1725748 | None:intergenic | 65.0% | |
| CCTCCACCATGGTGGCCAAC+AGG | - | chr6_1:1725726-1725745 | Msa0868210:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 1725408 | 1727146 | 1725408 | ID=Msa0868210;Name=Msa0868210 |
| chr6_1 | mRNA | 1725408 | 1727146 | 1725408 | ID=Msa0868210-mRNA-1;Parent=Msa0868210;Name=Msa0868210-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|2|0|467 |
| chr6_1 | exon | 1726126 | 1727146 | 1726126 | ID=Msa0868210-mRNA-1:exon:458;Parent=Msa0868210-mRNA-1 |
| chr6_1 | exon | 1725408 | 1725790 | 1725408 | ID=Msa0868210-mRNA-1:exon:457;Parent=Msa0868210-mRNA-1 |
| chr6_1 | CDS | 1726126 | 1727146 | 1726126 | ID=Msa0868210-mRNA-1:cds;Parent=Msa0868210-mRNA-1 |
| chr6_1 | CDS | 1725408 | 1725790 | 1725408 | ID=Msa0868210-mRNA-1:cds;Parent=Msa0868210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
