AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0868930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0868930 MtrunA17_Chr6g0450101 99.043 209 1 1 1 208 1 209 2.74e-156 430
Msa0868930 MtrunA17_Chr7g0228231 73.611 216 41 5 1 208 1 208 1.62e-107 307
Msa0868930 MtrunA17_Chr1g0209661 73.333 120 32 0 3 122 16 135 1.34e-65 204
Msa0868930 MtrunA17_Chr1g0194291 75.000 108 27 0 14 121 21 128 3.69e-59 186
Msa0868930 MtrunA17_Chr2g0293911 78.947 114 24 0 8 121 18 131 7.02e-58 185
Msa0868930 MtrunA17_Chr1g0194301 72.222 108 30 0 14 121 33 140 9.22e-58 183
Msa0868930 MtrunA17_Chr4g0068921 78.378 111 24 0 11 121 21 131 2.37e-56 177
Msa0868930 MtrunA17_Chr1g0168661 69.524 105 32 0 15 119 22 126 9.02e-52 167
Msa0868930 MtrunA17_Chr1g0186061 66.667 105 35 0 15 119 21 125 1.94e-49 161
Msa0868930 MtrunA17_Chr4g0039971 58.678 121 48 1 1 121 2 120 2.15e-46 156
Msa0868930 MtrunA17_Chr7g0275911 60.504 119 45 1 1 119 1 117 3.44e-46 153
Msa0868930 MtrunA17_Chr4g0068061 61.017 118 44 1 1 118 1 116 5.20e-46 155
Msa0868930 MtrunA17_Chr5g0410961 58.678 121 48 1 1 121 1 119 6.23e-46 155
Msa0868930 MtrunA17_Chr2g0327821 60.577 104 41 0 13 116 5 108 1.31e-45 151
Msa0868930 MtrunA17_Chr2g0330041 60.909 110 43 0 13 122 11 120 1.81e-45 155
Msa0868930 MtrunA17_Chr4g0070611 55.469 128 55 1 1 128 1 126 2.44e-45 152
Msa0868930 MtrunA17_Chr4g0070641 49.664 149 73 1 1 149 1 147 2.90e-45 148
Msa0868930 MtrunA17_Chr8g0385321 61.017 118 44 1 1 118 1 116 5.58e-45 151
Msa0868930 MtrunA17_Chr8g0346561 58.333 120 48 1 1 120 1 118 5.62e-45 151
Msa0868930 MtrunA17_Chr7g0261281 54.198 131 58 1 1 131 1 129 8.83e-45 150
Msa0868930 MtrunA17_Chr4g0037141 44.444 171 83 2 1 161 1 169 9.10e-45 150
Msa0868930 MtrunA17_Chr3g0131121 60.169 118 45 1 1 118 1 116 2.15e-44 149
Msa0868930 MtrunA17_Chr2g0323411 58.475 118 47 1 1 118 1 116 2.46e-44 150
Msa0868930 MtrunA17_Chr1g0203411 55.833 120 51 1 1 120 1 118 3.94e-44 149
Msa0868930 MtrunA17_Chr1g0167661 48.667 150 70 3 1 145 1 148 4.66e-44 147
Msa0868930 MtrunA17_Chr8g0349261 57.983 119 48 2 1 118 1 118 4.71e-44 149
Msa0868930 MtrunA17_Chr5g0395281 57.895 114 48 0 8 121 6 119 5.39e-44 149
Msa0868930 MtrunA17_Chr7g0274581 50.370 135 65 1 1 135 1 133 7.06e-44 145
Msa0868930 MtrunA17_Chr1g0187761 55.738 122 52 1 1 122 1 120 9.90e-44 147
Msa0868930 MtrunA17_Chr1g0193371 46.512 172 82 4 1 164 1 170 1.04e-43 149
Msa0868930 MtrunA17_Chr3g0115821 55.372 121 52 1 1 121 1 119 1.06e-43 149
Msa0868930 MtrunA17_Chr4g0030881 57.522 113 41 1 15 120 8 120 1.75e-43 146
Msa0868930 MtrunA17_Chr1g0180391 60.377 106 42 0 14 119 19 124 1.86e-43 145
Msa0868930 MtrunA17_Chr2g0281071 56.780 118 50 1 1 118 1 117 1.86e-43 148
Msa0868930 MtrunA17_Chr4g0032401 46.707 167 76 4 13 166 16 182 2.58e-43 147
Msa0868930 MtrunA17_Chr8g0387421 55.833 120 51 1 1 120 1 118 3.37e-43 147
Msa0868930 MtrunA17_Chr1g0167691 55.932 118 50 1 1 118 1 116 3.87e-43 145
Msa0868930 MtrunA17_Chr7g0228891 56.303 119 50 1 1 119 1 117 7.24e-43 145
Msa0868930 MtrunA17_Chr3g0110351 55.372 121 52 1 1 121 1 119 7.37e-43 146
Msa0868930 MtrunA17_Chr5g0434571 55.372 121 52 1 1 121 37 155 1.22e-42 146
Msa0868930 MtrunA17_Chr8g0342541 60.377 106 42 0 13 118 11 116 1.35e-42 146
Msa0868930 MtrunA17_Chr5g0435101 56.034 116 49 1 3 118 2 115 1.38e-42 142
Msa0868930 MtrunA17_Chr4g0057031 55.372 121 52 1 1 121 1 119 1.88e-42 144
Msa0868930 MtrunA17_Chr8g0354661 61.165 103 40 0 14 116 37 139 1.89e-42 149
Msa0868930 MtrunA17_Chr4g0048511 55.932 118 51 1 1 118 1 117 2.98e-42 145
Msa0868930 MtrunA17_Chr3g0099131 57.944 107 45 0 14 120 41 147 3.15e-42 149
Msa0868930 MtrunA17_Chr7g0217741 53.719 121 54 1 1 121 1 119 5.14e-42 144
Msa0868930 MtrunA17_Chr8g0342521 60.377 106 42 0 13 118 11 116 7.11e-42 144
Msa0868930 MtrunA17_Chr4g0044421 57.627 118 48 1 1 118 1 116 7.33e-42 140
Msa0868930 MtrunA17_Chr7g0270891 55.000 120 52 1 1 120 1 118 8.95e-42 144
Msa0868930 MtrunA17_Chr3g0121241 57.895 114 46 1 5 118 35 146 9.66e-42 143
Msa0868930 MtrunA17_Chr3g0080861 55.660 106 47 0 14 119 37 142 1.43e-41 147
Msa0868930 MtrunA17_Chr2g0309911 56.637 113 47 1 6 118 5 115 1.46e-41 142
Msa0868930 MtrunA17_Chr2g0328771 56.481 108 47 0 14 121 20 127 1.73e-41 142
Msa0868930 MtrunA17_Chr5g0397231 58.036 112 45 1 1 112 1 110 2.03e-41 143
Msa0868930 MtrunA17_Chr1g0193801 55.000 120 52 1 1 120 1 118 2.31e-41 144
Msa0868930 MtrunA17_Chr1g0151941 52.941 119 53 2 1 118 1 117 2.74e-41 140
Msa0868930 MtrunA17_Chr1g0154031 61.165 103 40 0 14 116 76 178 4.27e-41 144
Msa0868930 MtrunA17_Chr8g0343831 58.333 108 45 0 13 120 7 114 9.74e-41 139
Msa0868930 MtrunA17_Chr3g0088461 53.448 116 54 0 4 119 12 127 1.12e-40 141
Msa0868930 MtrunA17_Chr6g0453471 52.893 121 55 1 1 121 1 119 1.74e-40 141
Msa0868930 MtrunA17_Chr1g0211161 57.547 106 45 0 13 118 12 117 1.78e-40 137
Msa0868930 MtrunA17_Chr4g0022931 58.491 106 44 0 14 119 13 118 1.93e-40 139
Msa0868930 MtrunA17_Chr1g0194951 55.932 118 50 1 1 118 1 116 3.63e-40 140
Msa0868930 MtrunA17_Chr3g0117091 53.333 120 54 1 1 120 1 118 3.70e-40 140
Msa0868930 MtrunA17_Chr7g0271241 59.091 110 43 1 1 110 1 108 4.64e-40 140
Msa0868930 MtrunA17_Chr6g0452271 51.240 121 57 1 1 121 1 119 5.43e-40 139
Msa0868930 MtrunA17_Chr3g0092401 49.219 128 63 1 1 128 2 127 5.85e-40 138
Msa0868930 MtrunA17_Chr7g0254411 43.137 153 75 2 1 143 1 151 9.64e-40 139
Msa0868930 MtrunA17_Chr4g0042671 52.893 121 55 1 1 121 1 119 1.03e-39 140
Msa0868930 MtrunA17_Chr4g0022901 61.165 103 40 0 14 116 13 115 1.04e-39 137
Msa0868930 MtrunA17_Chr7g0217221 50.833 120 57 1 1 120 1 118 1.16e-39 136
Msa0868930 MtrunA17_Chr4g0022911 46.053 152 68 2 14 165 13 150 1.17e-39 137
Msa0868930 MtrunA17_Chr1g0203441 54.545 110 50 0 12 121 11 120 1.48e-39 136
Msa0868930 MtrunA17_Chr8g0342481 55.856 111 48 1 13 122 11 121 3.64e-39 138
Msa0868930 MtrunA17_Chr4g0058631 53.390 118 53 1 1 118 1 116 5.06e-39 137
Msa0868930 MtrunA17_Chr2g0323351 59.048 105 43 0 14 118 12 116 5.45e-39 134
Msa0868930 MtrunA17_Chr4g0022881 57.547 106 45 0 14 119 12 117 6.76e-39 133
Msa0868930 MtrunA17_Chr2g0311221 57.944 107 42 1 6 112 9 112 1.13e-38 135
Msa0868930 MtrunA17_Chr4g0060721 50.000 120 58 1 1 120 2 119 2.88e-38 134
Msa0868930 MtrunA17_Chr7g0269831 50.758 132 63 1 1 132 1 130 6.12e-38 134
Msa0868930 MtrunA17_Chr6g0453211 53.571 112 50 1 1 112 1 110 1.09e-37 132
Msa0868930 MtrunA17_Chr7g0264641 47.407 135 68 2 1 134 1 133 1.28e-37 131
Msa0868930 MtrunA17_Chr4g0028311 50.400 125 59 2 1 124 1 123 1.42e-37 132
Msa0868930 MtrunA17_Chr5g0400821 38.350 206 108 6 1 199 1 194 1.59e-37 132
Msa0868930 MtrunA17_Chr6g0470971 55.140 107 48 0 10 116 10 116 2.02e-37 131
Msa0868930 MtrunA17_Chr2g0322521 58.252 103 43 0 14 116 29 131 3.25e-37 133
Msa0868930 MtrunA17_Chr1g0192411 50.000 126 56 1 7 125 5 130 7.62e-37 132
Msa0868930 MtrunA17_Chr4g0055981 50.420 119 59 0 16 134 57 175 1.01e-36 128
Msa0868930 MtrunA17_Chr3g0135311 39.683 189 104 4 1 181 1 187 1.08e-36 130
Msa0868930 MtrunA17_Chr5g0440781 41.916 167 86 4 13 178 11 167 1.12e-36 126
Msa0868930 MtrunA17_Chr2g0327351 54.867 113 48 2 1 112 1 111 3.17e-36 129
Msa0868930 MtrunA17_Chr4g0022891 54.902 102 46 0 14 115 12 113 4.05e-36 127
Msa0868930 MtrunA17_Chr1g0152011 52.101 119 54 2 1 118 1 117 4.10e-36 129
Msa0868930 MtrunA17_Chr3g0103281 46.377 138 70 2 1 136 1 136 5.85e-36 128
Msa0868930 MtrunA17_Chr5g0441141 41.916 167 86 4 13 178 11 167 7.50e-36 127
Msa0868930 MtrunA17_Chr5g0440761 41.916 167 86 4 13 178 11 167 8.10e-36 126
Msa0868930 MtrunA17_Chr5g0417821 53.636 110 51 0 9 118 2 111 2.25e-34 123
Msa0868930 MtrunA17_Chr5g0441131 43.836 146 78 2 8 152 3 145 2.89e-34 120
Msa0868930 MtrunA17_Chr4g0072751 53.097 113 50 2 1 112 1 111 7.85e-34 123
Msa0868930 MtrunA17_Chr8g0334881 49.541 109 53 2 14 121 10 117 9.93e-34 122
Msa0868930 MtrunA17_Chr7g0240821 33.778 225 112 5 18 207 5 227 1.06e-33 120
Msa0868930 MtrunA17_Chr4g0054391 53.153 111 49 2 1 110 1 109 1.11e-33 122
Msa0868930 MtrunA17_Chr6g0487491 48.800 125 53 3 1 116 1 123 1.91e-32 117
Msa0868930 MtrunA17_Chr7g0247131 64.474 76 27 0 46 121 10 85 5.12e-32 117
Msa0868930 MtrunA17_Chr8g0360111 53.465 101 47 0 14 114 25 125 1.05e-31 115
Msa0868930 MtrunA17_Chr5g0434931 47.009 117 62 0 2 118 23 139 1.45e-31 116
Msa0868930 MtrunA17_Chr4g0013361 46.154 104 55 1 14 116 10 113 2.18e-31 115
Msa0868930 MtrunA17_Chr5g0434831 50.476 105 52 0 14 118 7 111 5.07e-31 112
Msa0868930 MtrunA17_Chr5g0434911 50.476 105 52 0 14 118 21 125 5.82e-31 114
Msa0868930 MtrunA17_Chr3g0099141 52.941 85 40 0 11 95 37 121 1.29e-30 109
Msa0868930 MtrunA17_Chr7g0228991 50.476 105 52 0 14 118 29 133 2.01e-30 112
Msa0868930 MtrunA17_Chr7g0220341 49.533 107 52 1 14 118 25 131 7.23e-30 111
Msa0868930 MtrunA17_Chr2g0294811 56.667 90 37 1 1 90 1 88 1.09e-29 106
Msa0868930 MtrunA17_Chr5g0434841 49.524 105 53 0 14 118 20 124 1.39e-29 111
Msa0868930 MtrunA17_Chr2g0323321 52.128 94 42 1 1 94 1 91 3.29e-27 100
Msa0868930 MtrunA17_Chr4g0042611 52.222 90 41 1 1 90 1 88 4.28e-27 99.0
Msa0868930 MtrunA17_Chr8g0342531 51.648 91 42 1 1 91 1 89 8.03e-27 100
Msa0868930 MtrunA17_Chr8g0342511 51.685 89 41 1 1 89 1 87 8.27e-27 98.6
Msa0868930 MtrunA17_Chr7g0238631 46.296 108 57 1 11 118 108 214 2.60e-26 105
Msa0868930 MtrunA17_Chr7g0238631 37.736 106 64 2 16 120 61 165 3.92e-12 64.7
Msa0868930 MtrunA17_Chr4g0008551 46.789 109 56 2 16 123 38 145 5.20e-26 102
Msa0868930 MtrunA17_Chr6g0454921 50.526 95 46 1 16 110 15 108 9.59e-26 99.0
Msa0868930 MtrunA17_Chr8g0342461 53.750 80 36 1 13 91 11 90 3.34e-25 95.9
Msa0868930 MtrunA17_Chr5g0395221 53.247 77 36 0 14 90 12 88 6.07e-25 93.6
Msa0868930 MtrunA17_Chr5g0425591 47.778 90 46 1 7 95 2 91 7.49e-25 93.6
Msa0868930 MtrunA17_Chr8g0342471 53.750 80 36 1 13 91 11 90 7.63e-25 94.7
Msa0868930 MtrunA17_Chr5g0401731 44.340 106 58 1 16 121 15 119 9.34e-25 99.0
Msa0868930 MtrunA17_Chr5g0429661 43.590 117 62 3 16 130 122 236 9.61e-25 99.4
Msa0868930 MtrunA17_Chr3g0139671 40.741 108 63 1 11 118 80 186 3.41e-24 99.8
Msa0868930 MtrunA17_Chr3g0133601 44.118 102 56 1 16 117 37 137 4.08e-24 95.1
Msa0868930 MtrunA17_Chr1g0157731 40.741 108 63 1 11 118 86 192 6.11e-24 99.0
Msa0868930 MtrunA17_Chr4g0053431 33.728 169 99 4 16 174 5 170 7.06e-24 95.5
Msa0868930 MtrunA17_Chr6g0460661 45.263 95 51 1 16 110 16 109 3.28e-23 91.3
Msa0868930 MtrunA17_Chr4g0058991 45.918 98 50 2 14 110 207 302 1.74e-22 94.4
Msa0868930 MtrunA17_Chr3g0117511 40.741 108 63 1 3 110 170 276 2.51e-22 93.6
Msa0868930 MtrunA17_Chr6g0480581 34.270 178 101 6 16 185 4 173 3.24e-22 90.5
Msa0868930 MtrunA17_Chr5g0417621 33.750 160 101 3 4 162 122 277 2.13e-21 90.9
Msa0868930 MtrunA17_Chr6g0453751 47.253 91 39 2 14 95 20 110 2.55e-21 85.5
Msa0868930 MtrunA17_Chr4g0042501 34.682 173 100 6 16 179 105 273 7.39e-21 89.4
Msa0868930 MtrunA17_Chr5g0437321 43.434 99 55 1 16 114 19 116 1.76e-20 87.0
Msa0868930 MtrunA17_Chr7g0228531 43.363 113 60 3 10 120 214 324 1.91e-20 88.2
Msa0868930 MtrunA17_Chr7g0229101 54.286 70 32 0 46 115 4 73 4.32e-20 84.3
Msa0868930 MtrunA17_Chr5g0416341 40.541 111 65 1 19 129 29 138 4.36e-20 87.4
Msa0868930 MtrunA17_Chr3g0093811 50.000 76 38 0 46 121 14 89 6.68e-20 85.1
Msa0868930 MtrunA17_Chr7g0238651 38.095 105 63 1 19 121 10 114 1.28e-19 85.5
Msa0868930 MtrunA17_Chr8g0362231 42.574 101 57 1 19 119 25 124 2.20e-19 85.5
Msa0868930 MtrunA17_Chr5g0434901 54.412 68 31 0 48 115 7 74 3.99e-19 79.3
Msa0868930 MtrunA17_Chr7g0229131 47.945 73 38 0 46 118 4 76 8.02e-19 80.1
Msa0868930 MtrunA17_Chr5g0397841 41.837 98 56 1 13 110 107 203 1.82e-18 82.8
Msa0868930 MtrunA17_Chr5g0397841 33.945 109 69 2 15 120 54 162 2.18e-11 62.4
Msa0868930 MtrunA17_Chr7g0228401 37.500 104 63 2 25 128 288 389 4.16e-18 82.0
Msa0868930 MtrunA17_Chr1g0177901 44.186 86 47 1 25 110 3 87 5.18e-18 79.0
Msa0868930 MtrunA17_Chr3g0125801 36.567 134 81 3 1 132 1 132 2.08e-17 78.6
Msa0868930 MtrunA17_Chr7g0228481 40.594 101 58 2 10 110 214 312 7.28e-17 78.2
Msa0868930 MtrunA17_Chr7g0233061 42.000 100 49 3 16 112 180 273 1.41e-16 77.0
Msa0868930 MtrunA17_Chr6g0460671 36.792 106 66 1 16 121 99 203 1.67e-16 76.6
Msa0868930 MtrunA17_Chr7g0254261 41.053 95 55 1 16 110 89 182 2.50e-16 76.3
Msa0868930 MtrunA17_Chr1g0193901 44.086 93 50 2 5 95 2 94 1.25e-15 70.1
Msa0868930 MtrunA17_Chr1g0193891 44.086 93 50 2 5 95 2 94 1.25e-15 70.1
Msa0868930 MtrunA17_Chr1g0193871 44.086 93 50 2 5 95 2 94 1.25e-15 70.1
Msa0868930 MtrunA17_Chr1g0193881 44.086 93 50 2 5 95 2 94 1.25e-15 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0868930 AT3G27810.1 66.981 212 54 6 11 208 17 226 2.03e-91 267
Msa0868930 AT5G40350.1 62.562 203 69 2 11 208 14 214 1.84e-85 252
Msa0868930 AT3G01530.1 59.809 209 62 6 4 208 12 202 5.97e-77 230
Msa0868930 AT3G27810.2 62.500 176 50 6 47 208 4 177 5.11e-65 199
Msa0868930 AT1G25340.1 68.293 123 38 1 1 122 4 126 1.40e-61 193
Msa0868930 AT1G68320.1 74.107 112 29 0 11 122 16 127 1.51e-61 193
Msa0868930 AT1G48000.1 73.832 107 28 0 13 119 31 137 3.26e-59 186
Msa0868930 AT2G47190.1 70.536 112 33 0 10 121 16 127 9.17e-58 183
Msa0868930 AT5G40350.2 55.689 167 67 2 47 208 5 169 1.34e-57 179
Msa0868930 AT5G49620.1 80.357 112 22 0 10 121 22 133 1.16e-56 182
Msa0868930 AT1G25340.2 65.041 123 37 2 1 122 4 121 4.75e-56 179
Msa0868930 AT1G25340.3 65.041 123 37 2 1 122 4 121 7.64e-56 179
Msa0868930 AT3G06490.1 73.913 115 30 0 7 121 12 126 4.77e-54 176
Msa0868930 AT5G49620.2 71.429 126 22 1 10 121 22 147 5.07e-53 173
Msa0868930 AT3G24310.1 71.429 105 30 0 15 119 19 123 3.61e-52 169
Msa0868930 AT4G13480.1 66.102 118 36 1 15 132 7 120 3.99e-52 169
Msa0868930 AT3G30210.1 64.762 105 37 0 15 119 28 132 2.28e-49 162
Msa0868930 AT5G59780.3 59.821 112 45 0 13 124 7 118 3.95e-48 157
Msa0868930 AT1G22640.1 42.788 208 98 7 1 204 1 191 5.52e-48 158
Msa0868930 AT3G46130.1 58.261 115 48 0 10 124 5 119 1.64e-47 157
Msa0868930 AT5G14750.1 48.077 156 75 2 3 152 2 157 1.43e-45 150
Msa0868930 AT3G02940.2 58.678 121 48 1 1 121 1 119 1.57e-45 153
Msa0868930 AT3G02940.1 58.678 121 48 1 1 121 1 119 2.38e-45 153
Msa0868930 AT3G02940.3 58.678 121 48 1 1 121 1 119 2.38e-45 153
Msa0868930 AT2G47460.1 59.322 118 46 1 1 118 1 116 6.69e-45 153
Msa0868930 AT1G09540.1 59.167 120 47 1 1 120 1 118 8.26e-45 153
Msa0868930 AT3G13890.2 61.321 106 41 0 13 118 11 116 8.58e-45 152
Msa0868930 AT4G09460.1 57.627 118 48 1 1 118 1 116 1.35e-44 149
Msa0868930 AT1G35515.1 57.627 118 48 1 1 118 1 116 3.20e-44 147
Msa0868930 AT4G38620.1 47.826 161 80 2 1 159 1 159 3.52e-44 149
Msa0868930 AT1G57560.1 50.331 151 71 2 1 149 1 149 4.04e-44 149
Msa0868930 AT1G06180.1 58.475 118 47 1 1 118 1 116 4.14e-44 147
Msa0868930 AT5G65230.1 59.649 114 46 0 8 121 6 119 6.01e-44 149
Msa0868930 AT1G57560.2 59.322 118 46 1 1 118 1 116 7.58e-44 148
Msa0868930 AT5G40330.1 56.522 115 50 0 9 123 7 121 7.64e-44 146
Msa0868930 AT2G31180.1 57.500 120 49 1 1 120 1 118 9.34e-44 147
Msa0868930 AT5G26660.1 41.837 196 104 3 1 188 1 194 1.03e-43 149
Msa0868930 AT5G16770.4 56.198 121 51 1 1 121 1 119 1.19e-43 149
Msa0868930 AT5G16770.3 56.198 121 51 1 1 121 1 119 1.19e-43 149
Msa0868930 AT2G16720.1 57.627 118 48 1 1 118 1 116 1.20e-43 147
Msa0868930 AT5G16770.1 56.198 121 51 1 1 121 1 119 2.05e-43 148
Msa0868930 AT5G16770.2 56.198 121 51 1 1 121 1 119 2.05e-43 148
Msa0868930 AT5G10280.1 54.545 121 53 1 1 121 1 119 2.11e-43 148
Msa0868930 AT3G01140.2 54.545 132 53 2 1 127 1 130 2.51e-43 148
Msa0868930 AT4G34990.1 57.627 118 48 1 1 118 1 116 2.52e-43 146
Msa0868930 AT4G17785.2 58.678 121 49 1 1 121 1 120 3.62e-43 148
Msa0868930 AT5G54230.1 51.351 148 61 2 14 156 12 153 3.83e-43 147
Msa0868930 AT4G21440.1 56.780 118 49 1 1 118 1 116 4.30e-43 148
Msa0868930 AT4G17785.1 58.678 121 49 1 1 121 1 120 4.70e-43 148
Msa0868930 AT5G07690.1 56.897 116 48 1 1 116 1 114 5.42e-43 147
Msa0868930 AT5G61420.2 54.167 120 53 1 1 120 1 118 5.51e-43 148
Msa0868930 AT5G60890.1 50.714 140 62 2 1 135 1 138 5.64e-43 146
Msa0868930 AT3G62610.1 56.780 118 49 1 1 118 1 116 6.41e-43 147
Msa0868930 AT3G23250.1 55.462 119 51 1 1 119 1 117 6.61e-43 145
Msa0868930 AT3G13540.1 56.198 121 48 1 3 118 7 127 1.01e-42 144
Msa0868930 AT1G63910.1 55.285 123 53 1 1 123 1 121 1.15e-42 147
Msa0868930 AT4G12350.1 55.738 122 52 1 1 122 1 120 1.47e-42 145
Msa0868930 AT4G22680.1 55.372 121 52 1 1 121 1 119 2.02e-42 144
Msa0868930 AT5G14340.1 56.198 121 51 1 1 121 13 131 2.29e-42 144
Msa0868930 AT5G49330.1 56.780 118 49 1 1 118 1 116 3.00e-42 145
Msa0868930 AT4G28110.1 57.627 118 48 1 1 118 1 116 3.10e-42 144
Msa0868930 AT4G05100.1 55.372 121 53 1 1 121 1 120 3.27e-42 145
Msa0868930 AT2G32460.1 48.438 128 66 0 14 141 18 145 4.66e-42 148
Msa0868930 AT3G27920.1 54.464 112 51 0 7 118 7 118 4.70e-42 142
Msa0868930 AT1G34670.1 55.372 121 52 1 1 121 1 119 4.97e-42 145
Msa0868930 AT2G32460.2 48.438 128 66 0 14 141 6 133 5.06e-42 148
Msa0868930 AT3G01140.1 57.983 119 45 1 14 127 55 173 6.13e-42 145
Msa0868930 AT3G11440.2 59.223 103 42 0 14 116 41 143 6.32e-42 147
Msa0868930 AT5G07700.1 46.250 160 67 3 14 156 12 169 8.59e-42 144
Msa0868930 AT5G07700.2 46.250 160 67 3 14 156 12 169 8.59e-42 144
Msa0868930 AT5G16600.1 54.545 121 53 1 1 121 1 119 9.06e-42 144
Msa0868930 AT3G13890.1 56.522 115 41 1 13 118 11 125 9.38e-42 145
Msa0868930 AT1G16490.1 56.034 116 49 1 3 118 5 118 1.00e-41 142
Msa0868930 AT1G66230.1 52.893 121 55 1 1 121 1 119 1.14e-41 142
Msa0868930 AT1G79180.1 55.085 118 51 1 3 120 5 120 1.34e-41 142
Msa0868930 AT5G06100.1 60.194 103 41 0 14 116 32 134 1.58e-41 146
Msa0868930 AT1G08810.1 41.379 174 91 3 1 165 1 172 1.63e-41 142
Msa0868930 AT5G12870.1 53.448 116 54 0 6 121 10 125 1.64e-41 142
Msa0868930 AT5G15310.4 54.545 121 53 1 1 121 1 119 1.71e-41 141
Msa0868930 AT3G08500.1 57.407 108 46 0 12 119 28 135 2.66e-41 143
Msa0868930 AT3G61250.1 54.237 118 52 1 1 118 1 116 2.94e-41 142
Msa0868930 AT5G15310.1 54.545 121 53 1 1 121 1 119 3.05e-41 142
Msa0868930 AT5G15310.2 54.545 121 53 1 1 121 1 119 3.31e-41 142
Msa0868930 AT1G18570.1 55.932 118 51 1 1 118 1 117 3.44e-41 143
Msa0868930 AT3G11440.3 59.223 103 42 0 14 116 41 143 3.53e-41 147
Msa0868930 AT3G11440.4 59.223 103 42 0 14 116 41 143 3.53e-41 147
Msa0868930 AT3G11440.1 59.223 103 42 0 14 116 41 143 3.53e-41 147
Msa0868930 AT5G06100.5 60.194 103 41 0 14 116 32 134 6.40e-41 145
Msa0868930 AT5G06100.2 60.194 103 41 0 14 116 32 134 6.40e-41 145
Msa0868930 AT5G06100.3 60.194 103 41 0 14 116 32 134 6.40e-41 145
Msa0868930 AT5G06100.4 60.194 103 41 0 14 116 32 134 6.40e-41 145
Msa0868930 AT4G01680.3 54.622 119 52 1 1 119 1 117 6.63e-41 139
Msa0868930 AT5G35550.1 55.932 118 52 0 1 118 1 118 7.65e-41 139
Msa0868930 AT4G26930.1 55.140 107 48 0 14 120 19 125 1.34e-40 142
Msa0868930 AT3G53200.1 57.944 107 45 0 10 116 5 111 1.47e-40 138
Msa0868930 AT4G01680.1 54.622 119 52 1 1 119 1 117 1.96e-40 140
Msa0868930 AT1G56160.1 55.172 116 50 1 3 118 5 118 2.28e-40 139
Msa0868930 AT3G47600.1 46.405 153 72 3 1 145 1 151 2.37e-40 140
Msa0868930 AT3G12720.1 56.604 106 46 0 13 118 21 126 2.65e-40 139
Msa0868930 AT5G62470.2 51.639 122 57 1 1 122 1 120 4.04e-40 140
Msa0868930 AT5G52600.1 57.282 103 44 0 14 116 12 114 8.34e-40 135
Msa0868930 AT5G55020.1 54.206 107 49 0 14 120 26 132 1.35e-39 142
Msa0868930 AT5G62320.1 44.720 161 72 4 3 148 4 162 2.12e-39 135
Msa0868930 AT1G74650.1 53.390 118 53 1 1 118 1 116 2.57e-39 137
Msa0868930 AT1G74080.1 55.172 116 50 1 1 116 1 114 5.95e-39 137
Msa0868930 AT2G26960.1 56.436 101 44 0 16 116 22 122 1.77e-38 137
Msa0868930 AT1G74430.1 57.009 107 46 0 14 120 12 118 2.04e-38 134
Msa0868930 AT4G37780.1 51.938 129 57 3 1 126 1 127 2.79e-38 134
Msa0868930 AT3G28910.1 50.407 123 59 1 1 123 1 121 3.46e-38 134
Msa0868930 AT5G62470.1 51.639 122 56 2 1 122 1 119 3.76e-38 135
Msa0868930 AT3G12820.1 54.867 113 48 1 6 118 9 118 3.40e-37 130
Msa0868930 AT4G01680.2 49.618 131 52 2 1 119 1 129 5.96e-37 132
Msa0868930 AT5G23000.1 51.261 119 55 2 1 118 1 117 8.35e-37 131
Msa0868930 AT3G49690.1 52.101 119 54 2 1 118 1 117 2.00e-36 129
Msa0868930 AT5G57620.1 50.420 119 56 2 1 118 1 117 4.77e-36 129
Msa0868930 AT2G36890.1 50.400 125 59 2 1 124 1 123 9.68e-36 127
Msa0868930 AT5G65790.1 51.261 119 55 2 1 118 1 117 1.29e-35 129
Msa0868930 AT2G36890.2 52.101 119 54 2 1 118 42 158 1.93e-35 127
Msa0868930 AT5G56110.1 43.226 155 82 3 1 153 1 151 1.99e-35 127
Msa0868930 AT3G28470.1 51.786 112 52 1 1 112 1 110 2.44e-35 127
Msa0868930 AT1G79180.2 43.046 151 51 2 3 120 5 153 6.48e-35 126
Msa0868930 AT4G25560.1 52.941 102 48 0 15 116 11 112 1.25e-34 124
Msa0868930 AT3G46130.3 65.000 80 28 0 45 124 8 87 1.27e-34 122
Msa0868930 AT1G18710.1 54.206 107 49 0 14 120 12 118 1.38e-34 124
Msa0868930 AT5G59780.2 66.667 78 26 0 47 124 20 97 1.70e-34 122
Msa0868930 AT5G52260.1 53.922 102 47 0 15 116 13 114 1.82e-34 123
Msa0868930 AT3G48920.1 45.600 125 64 1 15 135 19 143 2.06e-34 123
Msa0868930 AT3G46130.4 66.667 78 26 0 47 124 20 97 3.05e-34 122
Msa0868930 AT3G60460.1 47.321 112 57 2 13 123 10 120 3.19e-34 124
Msa0868930 AT1G66370.1 42.857 140 75 1 14 153 8 142 1.74e-33 120
Msa0868930 AT3G53200.2 67.143 70 23 0 47 116 9 78 5.69e-30 110
Msa0868930 AT5G26660.2 63.514 74 27 0 47 120 14 87 1.06e-29 112
Msa0868930 AT1G66380.1 52.427 103 49 0 14 116 8 110 2.00e-29 107
Msa0868930 AT1G56650.1 52.427 103 49 0 14 116 8 110 9.08e-29 108
Msa0868930 AT2G26950.1 35.119 168 92 3 16 166 18 185 1.30e-28 110
Msa0868930 AT5G14750.3 44.538 119 58 2 42 152 5 123 3.93e-28 104
Msa0868930 AT1G66390.1 52.427 103 49 0 14 116 8 110 5.93e-28 106
Msa0868930 AT5G35550.2 62.338 77 29 0 42 118 45 121 4.74e-27 104
Msa0868930 AT3G12820.2 62.319 69 26 0 50 118 2 70 5.12e-26 99.8
Msa0868930 AT3G47600.2 46.729 107 49 2 47 145 39 145 1.13e-25 102
Msa0868930 AT3G27785.1 42.593 108 61 1 3 110 176 282 1.53e-25 102
Msa0868930 AT5G11510.3 42.593 108 61 1 11 118 76 182 4.49e-25 102
Msa0868930 AT5G11510.1 42.593 108 61 1 11 118 76 182 4.49e-25 102
Msa0868930 AT5G11510.4 42.593 108 61 1 11 118 76 182 4.49e-25 102
Msa0868930 AT5G11510.5 42.593 108 61 1 11 118 76 182 4.56e-25 102
Msa0868930 AT5G11510.2 42.593 108 61 1 11 118 76 182 4.68e-25 102
Msa0868930 AT5G02320.1 44.037 109 60 1 11 119 122 229 4.76e-25 102
Msa0868930 AT5G02320.2 44.037 109 60 1 11 119 122 229 4.76e-25 102
Msa0868930 AT5G02320.3 44.037 109 60 1 11 119 62 169 6.02e-25 101
Msa0868930 AT3G09230.1 37.589 141 85 2 16 156 55 192 3.94e-24 98.6
Msa0868930 AT3G09370.2 43.396 106 59 1 11 116 130 234 4.45e-24 99.4
Msa0868930 AT3G09370.1 43.396 106 59 1 11 116 125 229 4.68e-24 99.4
Msa0868930 AT3G09370.3 43.396 106 59 1 11 116 138 242 6.01e-24 99.0
Msa0868930 AT5G58850.1 42.105 114 63 2 16 128 105 216 1.37e-23 97.4
Msa0868930 AT4G18770.1 46.316 95 50 1 16 110 217 310 1.50e-23 97.4
Msa0868930 AT3G55730.1 36.310 168 90 5 16 178 56 211 5.26e-23 95.5
Msa0868930 AT1G69560.1 36.842 133 81 2 4 135 95 225 6.23e-23 94.4
Msa0868930 AT1G69560.2 36.842 133 81 2 4 135 111 241 7.00e-23 94.7
Msa0868930 AT2G23290.1 45.545 101 54 1 16 116 13 112 8.41e-23 94.0
Msa0868930 AT4G32730.1 38.889 108 65 1 11 118 82 188 9.47e-23 95.9
Msa0868930 AT4G32730.5 38.889 108 65 1 11 118 82 188 1.08e-22 95.9
Msa0868930 AT4G32730.4 38.889 108 65 1 11 118 82 188 1.08e-22 95.9
Msa0868930 AT4G32730.3 38.889 108 65 1 11 118 82 188 1.08e-22 95.9
Msa0868930 AT4G32730.2 38.889 108 65 1 11 118 82 188 1.08e-22 95.9
Msa0868930 AT5G11050.1 40.517 116 66 2 14 128 103 216 1.14e-22 94.7
Msa0868930 AT5G67300.1 41.667 108 62 1 16 123 6 112 9.18e-22 90.9
Msa0868930 AT4G37260.1 43.564 101 56 1 16 116 13 112 1.00e-21 91.3
Msa0868930 AT3G50060.1 42.157 102 58 1 16 117 6 106 1.32e-21 90.5
Msa0868930 AT1G22640.3 37.584 149 74 6 60 204 1 134 1.33e-21 88.6
Msa0868930 AT2G39880.1 45.545 101 54 1 16 116 50 149 1.63e-21 91.3
Msa0868930 AT5G40360.1 42.268 97 55 1 14 110 156 251 2.09e-21 90.9
Msa0868930 AT3G29020.1 34.921 126 81 1 16 141 65 189 2.72e-21 88.2
Msa0868930 AT3G29020.2 34.921 126 81 1 16 141 67 191 4.19e-21 89.4
Msa0868930 AT1G26780.1 40.566 106 60 2 16 120 98 201 5.91e-20 85.9
Msa0868930 AT1G14350.2 43.564 101 56 1 19 119 28 127 6.56e-20 87.4
Msa0868930 AT1G14350.1 43.564 101 56 1 19 119 28 127 6.56e-20 87.4
Msa0868930 AT1G26780.2 39.048 105 63 1 16 120 98 201 7.39e-20 86.7
Msa0868930 AT5G14750.4 42.708 96 52 1 60 152 1 96 9.93e-20 82.0
Msa0868930 AT5G14750.2 42.708 96 52 1 60 152 1 96 9.93e-20 82.0
Msa0868930 AT3G23250.2 58.333 60 25 0 60 119 1 60 1.54e-19 83.6
Msa0868930 AT5G59780.1 64.151 53 19 0 72 124 1 53 1.60e-19 82.0
Msa0868930 AT1G73410.1 41.818 110 61 2 16 124 6 113 2.89e-19 83.2
Msa0868930 AT5G17800.1 36.036 111 70 1 16 126 93 202 3.01e-19 84.3
Msa0868930 AT3G46130.2 64.151 53 19 0 72 124 1 53 3.14e-19 82.0
Msa0868930 AT4G00540.2 38.596 114 66 2 11 121 98 210 3.47e-19 85.1
Msa0868930 AT1G66380.3 52.632 76 36 0 41 116 2 77 5.09e-19 79.0
Msa0868930 AT1G17950.1 45.833 96 49 2 16 110 5 98 6.37e-19 82.4
Msa0868930 AT1G73410.2 41.818 110 61 2 16 124 6 113 6.44e-19 81.3
Msa0868930 AT4G00540.1 38.596 114 66 2 11 121 96 208 6.73e-19 84.3
Msa0868930 AT1G18960.1 39.286 112 59 4 16 123 10 116 8.41e-19 82.8
Msa0868930 AT2G25230.1 37.500 120 71 2 13 129 23 141 2.03e-18 80.9
Msa0868930 AT2G37630.1 37.500 104 63 1 19 120 7 110 3.67e-18 82.0
Msa0868930 AT4G33450.1 40.404 99 58 1 10 108 13 110 5.58e-18 79.7
Msa0868930 AT5G39700.1 38.679 106 64 1 15 120 55 159 6.29e-18 78.6
Msa0868930 AT1G66380.2 50.000 78 39 0 14 91 8 85 7.87e-18 76.3
Msa0868930 AT1G71030.2 31.613 155 83 3 53 199 5 144 1.07e-17 77.8
Msa0868930 AT2G02820.2 42.574 101 57 1 19 119 33 132 1.25e-17 80.9
Msa0868930 AT2G02820.3 42.574 101 57 1 19 119 33 132 1.33e-17 80.1
Msa0868930 AT2G02820.1 42.574 101 57 1 19 119 33 132 1.36e-17 80.9
Msa0868930 AT1G71030.1 31.613 155 83 3 53 199 19 158 1.52e-17 77.4
Msa0868930 AT5G40430.1 37.000 100 61 2 13 112 51 148 7.31e-14 68.6
Msa0868930 AT3G18100.4 38.776 98 59 1 14 111 383 479 1.57e-12 66.2
Msa0868930 AT3G18100.1 38.776 98 59 1 14 111 544 640 1.62e-12 66.2
Msa0868930 AT1G14350.3 46.774 62 33 0 58 119 23 84 1.94e-12 65.5
Msa0868930 AT1G14350.4 46.774 62 33 0 58 119 23 84 1.94e-12 65.5
Msa0868930 AT3G18100.3 38.776 98 59 1 14 111 496 592 1.99e-12 65.9
Msa0868930 AT3G18100.2 38.776 98 59 1 14 111 331 427 2.19e-12 65.9
Msa0868930 AT4G25560.2 55.556 45 20 0 72 116 2 46 7.95e-12 62.4

Find 47 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAAGATGCTTTGCAATTT+TGG 0.072305 6_1:+2759341 None:intergenic
TCATTTGTTGGAAATTATTT+TGG 0.165796 6_1:+2759241 None:intergenic
ACAACAATAACAACAATTAT+TGG 0.250956 6_1:-2759056 Msa0868930:CDS
CAAATCATGGTGAAGGAGTT+TGG 0.269405 6_1:-2763337 Msa0868930:CDS
ATCAATTATATTGCAAATCA+TGG 0.336651 6_1:-2763350 Msa0868930:CDS
TTATCTCTAAACTCATTTGT+TGG 0.351444 6_1:+2759229 None:intergenic
ATCTCATTGTCAGTTCTTCC+TGG 0.357351 6_1:+2759321 None:intergenic
AAATAAATTACCAGCAGCTT+TGG 0.372375 6_1:+2763304 None:intergenic
TTCATGCAAAGTGGGGAAAT+AGG 0.374488 6_1:-2763050 Msa0868930:intron
GAGAAAAGGGCCATGGACTA+TGG 0.379680 6_1:-2763390 Msa0868930:CDS
ACCTTCATACCAAGGAACTT+TGG 0.419393 6_1:-2759139 Msa0868930:CDS
AAAATTGCAAAGCATCTTCC+AGG 0.422621 6_1:-2759339 Msa0868930:CDS
ATATTCCCTCTTCTAACATC+TGG 0.433582 6_1:+2763105 None:intergenic
TTCCATTGGCTCTACAATGT+TGG 0.446256 6_1:+2759173 None:intergenic
GCTCTACAATGTTGGAAACT+TGG 0.458115 6_1:+2759181 None:intergenic
ATTGGAGCATGGAGGACATC+TGG 0.460578 6_1:-2759038 Msa0868930:CDS
TCCAAAGTTCCTTGGTATGA+AGG 0.461178 6_1:+2759138 None:intergenic
GTTGGAAATTGAGCTGGAAA+TGG 0.461208 6_1:+2759114 None:intergenic
ATGATCAAAAGTTGTTCCTC+AGG 0.466285 6_1:+2763078 None:intergenic
CAAGATCCTGAAGTGAGAAA+AGG 0.475828 6_1:-2763404 Msa0868930:CDS
TTGATAGTTGGAAATTGAGC+TGG 0.478961 6_1:+2759108 None:intergenic
AAGATCCTGAAGTGAGAAAA+GGG 0.481473 6_1:-2763403 Msa0868930:CDS
GAGGGATGATCATTGATAGT+TGG 0.483902 6_1:+2759096 None:intergenic
CTTCTAGGTCTTAAACGTAC+AGG 0.498742 6_1:-2763165 Msa0868930:intron
TTCCAACATTGTAGAGCCAA+TGG 0.503331 6_1:-2759175 Msa0868930:CDS
CATGGAACTTCATGCAAAGT+GGG 0.506898 6_1:-2763058 Msa0868930:CDS
GTCATTTGTACAACAACTTG+AGG 0.527781 6_1:+2759077 None:intergenic
TGGTCTATGCAATTACTCAA+TGG 0.528133 6_1:-2759018 Msa0868930:CDS
ATTACCAGCAGCTTTGGCTA+AGG 0.529834 6_1:+2763310 None:intergenic
TCATTTGTACAACAACTTGA+GGG 0.534266 6_1:+2759078 None:intergenic
GAAATGGCTCCAAAGTTCCT+TGG 0.536462 6_1:+2759130 None:intergenic
AATTCCTTAGCCAAAGCTGC+TGG 0.538366 6_1:-2763314 Msa0868930:intron
GGTGGAGAGTAAGTTTCCAT+TGG 0.555924 6_1:+2759159 None:intergenic
TATATTGCAAATCATGGTGA+AGG 0.562615 6_1:-2763344 Msa0868930:CDS
CTGAAGTGAGAAAAGGGCCA+TGG 0.578308 6_1:-2763397 Msa0868930:CDS
TAACAACAATTATTGGAGCA+TGG 0.585348 6_1:-2759049 Msa0868930:CDS
TTCGTCCAGATGTTAGAAGA+GGG 0.588722 6_1:-2763110 Msa0868930:CDS
TCATGGAACTTCATGCAAAG+TGG 0.594009 6_1:-2763059 Msa0868930:CDS
AAGTCTTCTTCCATAGTCCA+TGG 0.596815 6_1:+2763380 None:intergenic
CTTCGTCCAGATGTTAGAAG+AGG 0.620193 6_1:-2763111 Msa0868930:CDS
AAAGTTCCTTGGTATGAAGG+TGG 0.624657 6_1:+2759141 None:intergenic
TACTCTCCACCTTCATACCA+AGG 0.630508 6_1:-2759147 Msa0868930:CDS
GGATCTTGAGATGAGTTACA+CGG 0.649211 6_1:+2763419 None:intergenic
CTCTTCTAACATCTGGACGA+AGG 0.659555 6_1:+2763112 None:intergenic
ATGGAACTTCATGCAAAGTG+GGG 0.673203 6_1:-2763057 Msa0868930:CDS
AAGAGGGAATATTACACCTG+AGG 0.685444 6_1:-2763094 Msa0868930:CDS
CAACAATTATTGGAGCATGG+AGG 0.738401 6_1:-2759046 Msa0868930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG - chr6_1:2759466-2759485 Msa0868930:intron 0.0%
!!! TTAATTTTTTGTTAAAGAAA+TGG - chr6_1:2759563-2759582 Msa0868930:intron 10.0%
!! AAATAAATTAGAAAAAAAGA+AGG + chr6_1:2760214-2760233 None:intergenic 10.0%
!! AAATTAAAAATATATGAACT+AGG - chr6_1:2761402-2761421 Msa0868930:intron 10.0%
!! TACTATAATAATTATTATTG+AGG + chr6_1:2761442-2761461 None:intergenic 10.0%
!! ATAAATAATATTTCAAAACT+TGG + chr6_1:2761840-2761859 None:intergenic 10.0%
!! ATATAAAGACAATAAAATGT+TGG - chr6_1:2761285-2761304 Msa0868930:intron 15.0%
!! TTATTATATAGGAAAATGAA+TGG + chr6_1:2761490-2761509 None:intergenic 15.0%
!!! ATCATTGAAATATTTGAAAT+TGG - chr6_1:2762030-2762049 Msa0868930:intron 15.0%
!! TAGCAACAAAAATATTAAAT+AGG + chr6_1:2762341-2762360 None:intergenic 15.0%
!!! TATTTTATGTTTTTAAGTAG+TGG - chr6_1:2762772-2762791 Msa0868930:intron 15.0%
!!! AAAAATGTTTTGTGAATATT+GGG + chr6_1:2762875-2762894 None:intergenic 15.0%
!!! AAAAAATGTTTTGTGAATAT+TGG + chr6_1:2762876-2762895 None:intergenic 15.0%
!! ATCAATTATATTGCAAATCA+TGG - chr6_1:2759092-2759111 Msa0868930:CDS 20.0%
!!! ACTTTATTTTTTCTTCTTCT+AGG - chr6_1:2759262-2759281 Msa0868930:CDS 20.0%
!! AAAATTAAGATCTAGTAGTT+AGG + chr6_1:2759551-2759570 None:intergenic 20.0%
!!! CTTTTATCTTTGTAAGATAA+AGG + chr6_1:2759635-2759654 None:intergenic 20.0%
!! TTACTTATATAATAAGGAGA+GGG + chr6_1:2759680-2759699 None:intergenic 20.0%
!! TAAGGAAACATTAATTAGTA+TGG - chr6_1:2759721-2759740 Msa0868930:intron 20.0%
!!! ATCAGTTTCTATGTTTTTAA+AGG - chr6_1:2759855-2759874 Msa0868930:intron 20.0%
!! ATCTTCATTTATATTTCTCA+AGG + chr6_1:2760022-2760041 None:intergenic 20.0%
!! TTGAGAAATATAAATGAAGA+TGG - chr6_1:2760021-2760040 Msa0868930:intron 20.0%
!!! ATTTGTTTTCTTGAAAAGAA+GGG + chr6_1:2760164-2760183 None:intergenic 20.0%
!!! AAACATTTTAGCTTTACAAT+TGG - chr6_1:2760303-2760322 Msa0868930:intron 20.0%
!! AAAAGATTGAAACCTATATA+AGG + chr6_1:2760340-2760359 None:intergenic 20.0%
!! TTAATCAACTTGTAGTAAAT+TGG - chr6_1:2760544-2760563 Msa0868930:intron 20.0%
!! TGAAATCATTTCATCTTATT+CGG + chr6_1:2761145-2761164 None:intergenic 20.0%
!! CATATAGTAAAAAACATACT+TGG - chr6_1:2761163-2761182 Msa0868930:intron 20.0%
!!! TTAATTTTCTTTGTAGGAAA+AGG + chr6_1:2761207-2761226 None:intergenic 20.0%
!!! TTTTCCTACAAAGAAAATTA+AGG - chr6_1:2761206-2761225 Msa0868930:intron 20.0%
!! AAAAATATATGAACTAGGAT+AGG - chr6_1:2761407-2761426 Msa0868930:intron 20.0%
!! GTTCTCAATCATTATTATAT+AGG + chr6_1:2761501-2761520 None:intergenic 20.0%
!! AATAATATTTCAAAACTTGG+TGG + chr6_1:2761837-2761856 None:intergenic 20.0%
!! TTTAAGAGTCATAAAAGAAA+AGG - chr6_1:2761983-2762002 Msa0868930:intron 20.0%
!! ATTAATTAAAAGCTGTCAAA+TGG + chr6_1:2762390-2762409 None:intergenic 20.0%
!!! TTTTCATCACTAATTTATGT+CGG + chr6_1:2762659-2762678 None:intergenic 20.0%
!!! ACAATGAGATTAAGAATTTT+TGG - chr6_1:2763134-2763153 Msa0868930:CDS 20.0%
!!! TCATTTGTTGGAAATTATTT+TGG + chr6_1:2763204-2763223 None:intergenic 20.0%
!! ACAACAATAACAACAATTAT+TGG - chr6_1:2763386-2763405 Msa0868930:CDS 20.0%
! TTCAAATATTACCCTAGTTA+GGG + chr6_1:2759239-2759258 None:intergenic 25.0%
! ATTCAAATATTACCCTAGTT+AGG + chr6_1:2759240-2759259 None:intergenic 25.0%
! CTTTGTAAGATAAAGGTTAA+TGG + chr6_1:2759628-2759647 None:intergenic 25.0%
! CTTACTTATATAATAAGGAG+AGG + chr6_1:2759681-2759700 None:intergenic 25.0%
! GTGTGCTTACTTATATAATA+AGG + chr6_1:2759686-2759705 None:intergenic 25.0%
!!! TAAGTAATATTTTGAGCCAT+AGG + chr6_1:2759825-2759844 None:intergenic 25.0%
!!! CTTCAAAATGATTTGTTTTG+TGG - chr6_1:2759878-2759897 Msa0868930:intron 25.0%
! AGATGTTGAATTAAGCAAAA+AGG + chr6_1:2759956-2759975 None:intergenic 25.0%
!! TTTCCATGCATATGTTTTAT+AGG + chr6_1:2760048-2760067 None:intergenic 25.0%
! AATATAAAGGAAAAAGAGGA+AGG + chr6_1:2760134-2760153 None:intergenic 25.0%
! GAGAAATATAAAGGAAAAAG+AGG + chr6_1:2760138-2760157 None:intergenic 25.0%
!!! GATTTGTTTTCTTGAAAAGA+AGG + chr6_1:2760165-2760184 None:intergenic 25.0%
! CAAAACAAATAACTTGAGTT+TGG + chr6_1:2760490-2760509 None:intergenic 25.0%
! AGAGAAAATGAAATGTACAA+TGG - chr6_1:2760613-2760632 Msa0868930:intron 25.0%
! AATAGTAAAAGACAAAGACT+AGG - chr6_1:2760950-2760969 Msa0868930:intron 25.0%
!! TTTTGCAAAGATAAATGCAA+AGG + chr6_1:2761010-2761029 None:intergenic 25.0%
! AAAGAGATAGAGAGAATAAA+TGG - chr6_1:2761090-2761109 Msa0868930:intron 25.0%
! AAGAGATAGAGAGAATAAAT+GGG - chr6_1:2761091-2761110 Msa0868930:intron 25.0%
! GAAATCATTTCATCTTATTC+GGG + chr6_1:2761144-2761163 None:intergenic 25.0%
! CAAAGAAATTTCAAGAAGTT+TGG - chr6_1:2761607-2761626 Msa0868930:intron 25.0%
!! ACAACTTTTATAACTAGCTA+TGG - chr6_1:2761888-2761907 Msa0868930:intron 25.0%
! TATGGATAATGAAATCTACT+AGG - chr6_1:2761906-2761925 Msa0868930:intron 25.0%
! AATGAAATCTACTAGGTAAT+TGG - chr6_1:2761913-2761932 Msa0868930:intron 25.0%
!! TGAAATATTTGAAATTGGAG+CGG - chr6_1:2762035-2762054 Msa0868930:intron 25.0%
! AACACAACTACTTTATAAAG+AGG - chr6_1:2762058-2762077 Msa0868930:intron 25.0%
! ATATAAGAAAGAGAGAAGTT+TGG - chr6_1:2762086-2762105 Msa0868930:intron 25.0%
!! ATTTTCCATTGTATCATCAA+AGG - chr6_1:2762211-2762230 Msa0868930:intron 25.0%
!! TTTTCCATTGTATCATCAAA+GGG - chr6_1:2762212-2762231 Msa0868930:intron 25.0%
!! ATATCTCCTCATTTTACATA+TGG - chr6_1:2762475-2762494 Msa0868930:intron 25.0%
! TGAAAACCATATGTAAAATG+AGG + chr6_1:2762484-2762503 None:intergenic 25.0%
!! ACCATGTTCATTTTATAAAG+AGG - chr6_1:2762509-2762528 Msa0868930:intron 25.0%
! ACCTCTTTATAAAATGAACA+TGG + chr6_1:2762513-2762532 None:intergenic 25.0%
! AAACTAATCATTAGCTACAA+AGG - chr6_1:2762574-2762593 Msa0868930:intron 25.0%
! TTTATGAAGATGGAATAAGA+GGG + chr6_1:2762693-2762712 None:intergenic 25.0%
! ATTTATGAAGATGGAATAAG+AGG + chr6_1:2762694-2762713 None:intergenic 25.0%
! GTCACTAAAATTTATGAAGA+TGG + chr6_1:2762703-2762722 None:intergenic 25.0%
! ATATATTAACACCTTCACTT+TGG + chr6_1:2763002-2763021 None:intergenic 25.0%
!!! GAAAAAGTTATTTTCATGCT+TGG + chr6_1:2763031-2763050 None:intergenic 25.0%
!!! ATGAGATTAAGAATTTTTGG+AGG - chr6_1:2763137-2763156 Msa0868930:CDS 25.0%
! TTATCTCTAAACTCATTTGT+TGG + chr6_1:2763216-2763235 None:intergenic 25.0%
TATATTGCAAATCATGGTGA+AGG - chr6_1:2759098-2759117 Msa0868930:CDS 30.0%
AAATAAATTACCAGCAGCTT+TGG + chr6_1:2759141-2759160 None:intergenic 30.0%
!! TTCCTTATAGACCTTTTTCA+TGG + chr6_1:2759708-2759727 None:intergenic 30.0%
!!! TTTGTGGTTTTATATCCGTA+TGG - chr6_1:2759894-2759913 Msa0868930:intron 30.0%
!!! TTGTGGTTTTATATCCGTAT+GGG - chr6_1:2759895-2759914 Msa0868930:intron 30.0%
CACATAACATGTACCTTTAA+AGG + chr6_1:2759929-2759948 None:intergenic 30.0%
AAAATTGTGAGAGAGATAGA+GGG + chr6_1:2759997-2760016 None:intergenic 30.0%
AAAAATTGTGAGAGAGATAG+AGG + chr6_1:2759998-2760017 None:intergenic 30.0%
AAACATATGCATGGAAAGTT+TGG - chr6_1:2760051-2760070 Msa0868930:intron 30.0%
TTTGATCTCACTAGAACATA+AGG - chr6_1:2760078-2760097 Msa0868930:intron 30.0%
CTAGAACATAAGGAATAAAG+AGG - chr6_1:2760088-2760107 Msa0868930:intron 30.0%
! CTTTGTCTTTTACTATTGAG+AGG + chr6_1:2760947-2760966 None:intergenic 30.0%
GAAGATAGATATCTAGAAGA+TGG - chr6_1:2760975-2760994 Msa0868930:intron 30.0%
AAAGTGAGAGAAAGAAAAAG+AGG - chr6_1:2761035-2761054 Msa0868930:intron 30.0%
TCCTACAAAGAAAATTAAGG+AGG - chr6_1:2761209-2761228 Msa0868930:intron 30.0%
! TCCTCCTTAATTTTCTTTGT+AGG + chr6_1:2761213-2761232 None:intergenic 30.0%
AAGACAATAAAATGTTGGAG+AGG - chr6_1:2761290-2761309 Msa0868930:intron 30.0%
AGACAATAAAATGTTGGAGA+GGG - chr6_1:2761291-2761310 Msa0868930:intron 30.0%
AATATATGAACTAGGATAGG+TGG - chr6_1:2761410-2761429 Msa0868930:intron 30.0%
!! TTGTACTTGTTTTCTTGGTT+GGG + chr6_1:2761769-2761788 None:intergenic 30.0%
!! TTTGTACTTGTTTTCTTGGT+TGG + chr6_1:2761770-2761789 None:intergenic 30.0%
!! GTGTTTTGTACTTGTTTTCT+TGG + chr6_1:2761774-2761793 None:intergenic 30.0%
ACAAGTACAAAACACTAAGA+AGG - chr6_1:2761779-2761798 Msa0868930:intron 30.0%
GTAAGTGAGAAATGTGATAT+TGG - chr6_1:2762152-2762171 Msa0868930:intron 30.0%
! AAATGTGATATTGGTGATCT+TGG - chr6_1:2762161-2762180 Msa0868930:intron 30.0%
CTATTGTTATAAGATGCTGA+AGG + chr6_1:2762239-2762258 None:intergenic 30.0%
TTATTCTCAACCAAAGAACA+TGG - chr6_1:2762295-2762314 Msa0868930:intron 30.0%
TGAAAAAGAAATGCAACAAG+TGG + chr6_1:2762415-2762434 None:intergenic 30.0%
ATATGTAAAATGTGCATGTG+TGG + chr6_1:2762457-2762476 None:intergenic 30.0%
TTATGAAGATGGAATAAGAG+GGG + chr6_1:2762692-2762711 None:intergenic 30.0%
TTAGTGACAAAATTAGAGAG+TGG - chr6_1:2762715-2762734 Msa0868930:intron 30.0%
CCTCTAGTATCTAATATCAA+AGG + chr6_1:2762817-2762836 None:intergenic 30.0%
CCTTTGATATTAGATACTAG+AGG - chr6_1:2762814-2762833 Msa0868930:intron 30.0%
! GAGTTTTTATTATCACAAGC+AGG + chr6_1:2762906-2762925 None:intergenic 30.0%
TACAAATTATTCACCATTGC+AGG - chr6_1:2763074-2763093 Msa0868930:CDS 30.0%
!! TTAAGAATTTTTGGAGGACT+AGG - chr6_1:2763143-2763162 Msa0868930:CDS 30.0%
!!! TGTTGGAAATTATTTTGGTG+AGG + chr6_1:2763199-2763218 None:intergenic 30.0%
TCATTTGTACAACAACTTGA+GGG + chr6_1:2763367-2763386 None:intergenic 30.0%
TAACAACAATTATTGGAGCA+TGG - chr6_1:2763393-2763412 Msa0868930:CDS 30.0%
AAGATCCTGAAGTGAGAAAA+GGG - chr6_1:2759039-2759058 Msa0868930:CDS 35.0%
TTTCTCAGTAAACCCTAACT+AGG - chr6_1:2759224-2759243 Msa0868930:CDS 35.0%
TTCTCAGTAAACCCTAACTA+GGG - chr6_1:2759225-2759244 Msa0868930:CDS 35.0%
ATATTCCCTCTTCTAACATC+TGG + chr6_1:2759340-2759359 None:intergenic 35.0%
ATGATCAAAAGTTGTTCCTC+AGG + chr6_1:2759367-2759386 None:intergenic 35.0%
! TGAGGAACAACTTTTGATCA+TGG - chr6_1:2759366-2759385 Msa0868930:intron 35.0%
AAGTAAGCACACCATGAAAA+AGG - chr6_1:2759694-2759713 Msa0868930:intron 35.0%
CACCATGAAAAAGGTCTATA+AGG - chr6_1:2759703-2759722 Msa0868930:intron 35.0%
TAGTATGGTCATGAAGACTA+AGG - chr6_1:2759736-2759755 Msa0868930:intron 35.0%
AGTATGGTCATGAAGACTAA+GGG - chr6_1:2759737-2759756 Msa0868930:intron 35.0%
TAAAGGAAAACTCTCCCATA+CGG + chr6_1:2759912-2759931 None:intergenic 35.0%
! ATGGGAGAGTTTTCCTTTAA+AGG - chr6_1:2759913-2759932 Msa0868930:intron 35.0%
GGACCTATAAAACATATGCA+TGG - chr6_1:2760042-2760061 Msa0868930:intron 35.0%
! GAAGGGCATGAGAAATATAA+AGG + chr6_1:2760147-2760166 None:intergenic 35.0%
GAGCTTAGTATGCCTTATAT+AGG - chr6_1:2760325-2760344 Msa0868930:intron 35.0%
TCTACATCCTTTGCAACATA+GGG - chr6_1:2760583-2760602 Msa0868930:intron 35.0%
!!! TTTTTTCCCCTATGTTGCAA+AGG + chr6_1:2760593-2760612 None:intergenic 35.0%
CAAATGGAGAGACTGATAAA+TGG - chr6_1:2760740-2760759 Msa0868930:intron 35.0%
CTCTCTCTTTCTCTCAATAA+AGG + chr6_1:2760840-2760859 None:intergenic 35.0%
AGTAAAAGACAAAGACTAGG+AGG - chr6_1:2760953-2760972 Msa0868930:intron 35.0%
CAAAGAAAATTAAGGAGGAG+AGG - chr6_1:2761214-2761233 Msa0868930:intron 35.0%
AATAAAATGTTGGAGAGGGA+TGG - chr6_1:2761295-2761314 Msa0868930:intron 35.0%
TGATTGAGAACCAAATAGCT+TGG - chr6_1:2761510-2761529 Msa0868930:intron 35.0%
! ACAAGGTCAGCTTCTATTTT+AGG - chr6_1:2761533-2761552 Msa0868930:intron 35.0%
! AAGTTGCATGGCATTTTGTT+TGG + chr6_1:2761644-2761663 None:intergenic 35.0%
! ACAAAATGCCATGCAACTTT+TGG - chr6_1:2761645-2761664 Msa0868930:intron 35.0%
TACACGTGGCATAAAAGAAA+AGG - chr6_1:2761936-2761955 Msa0868930:intron 35.0%
TTCTCACTTACATGTCTCAA+AGG + chr6_1:2762143-2762162 None:intergenic 35.0%
TCAAGTAAGACCATGTTCTT+TGG + chr6_1:2762308-2762327 None:intergenic 35.0%
GTGGATTTATAGTTGTATCG+CGG - chr6_1:2762791-2762810 Msa0868930:intron 35.0%
AAATTATTCACCATTGCAGG+TGG - chr6_1:2763077-2763096 Msa0868930:CDS 35.0%
! TGGAAGATGCTTTGCAATTT+TGG + chr6_1:2763104-2763123 None:intergenic 35.0%
! AAAATTGCAAAGCATCTTCC+AGG - chr6_1:2763103-2763122 Msa0868930:CDS 35.0%
! TTGATAGTTGGAAATTGAGC+TGG + chr6_1:2763337-2763356 None:intergenic 35.0%
GTCATTTGTACAACAACTTG+AGG + chr6_1:2763368-2763387 None:intergenic 35.0%
TGGTCTATGCAATTACTCAA+TGG - chr6_1:2763424-2763443 Msa0868930:CDS 35.0%
GGATCTTGAGATGAGTTACA+CGG + chr6_1:2759026-2759045 None:intergenic 40.0%
CAAGATCCTGAAGTGAGAAA+AGG - chr6_1:2759038-2759057 Msa0868930:CDS 40.0%
AAGTCTTCTTCCATAGTCCA+TGG + chr6_1:2759065-2759084 None:intergenic 40.0%
CAAATCATGGTGAAGGAGTT+TGG - chr6_1:2759105-2759124 Msa0868930:CDS 40.0%
CTTCTAGGTCTTAAACGTAC+AGG - chr6_1:2759277-2759296 Msa0868930:CDS 40.0%
AACGTACAGGAAAAAGTTGC+AGG - chr6_1:2759290-2759309 Msa0868930:CDS 40.0%
TTCGTCCAGATGTTAGAAGA+GGG - chr6_1:2759332-2759351 Msa0868930:CDS 40.0%
AAGAGGGAATATTACACCTG+AGG - chr6_1:2759348-2759367 Msa0868930:CDS 40.0%
TCATGGAACTTCATGCAAAG+TGG - chr6_1:2759383-2759402 Msa0868930:intron 40.0%
CATGGAACTTCATGCAAAGT+GGG - chr6_1:2759384-2759403 Msa0868930:intron 40.0%
ATGGAACTTCATGCAAAGTG+GGG - chr6_1:2759385-2759404 Msa0868930:intron 40.0%
TTCATGCAAAGTGGGGAAAT+AGG - chr6_1:2759392-2759411 Msa0868930:intron 40.0%
ATGTGTTGAAGTCTTCCTCT+TGG + chr6_1:2759791-2759810 None:intergenic 40.0%
AAGAGGAAGACTTCAACACA+TGG - chr6_1:2759790-2759809 Msa0868930:intron 40.0%
AGAGGAAGACTTCAACACAT+GGG - chr6_1:2759791-2759810 Msa0868930:intron 40.0%
CACATGGGAGTTAAAACCTA+TGG - chr6_1:2759806-2759825 Msa0868930:intron 40.0%
ATGTTGTGAAAGATGCAGCA+AGG - chr6_1:2760267-2760286 Msa0868930:intron 40.0%
CTATGTTGCAAAGGATGTAG+AGG + chr6_1:2760584-2760603 None:intergenic 40.0%
CTCTACATCCTTTGCAACAT+AGG - chr6_1:2760582-2760601 Msa0868930:intron 40.0%
CTACATCCTTTGCAACATAG+GGG - chr6_1:2760584-2760603 Msa0868930:intron 40.0%
TTGCAAAGGGAAGGAACAAA+TGG - chr6_1:2760724-2760743 Msa0868930:intron 40.0%
AAATGGAGAGGATCTTGACT+CGG - chr6_1:2760757-2760776 Msa0868930:intron 40.0%
AGAACCAAATAGCTTGGACA+AGG - chr6_1:2761516-2761535 Msa0868930:intron 40.0%
!! TCTATTTTAGGCTGAGCTCA+TGG - chr6_1:2761545-2761564 Msa0868930:intron 40.0%
! TTGGGAAGGTACACTAGATA+GGG + chr6_1:2761732-2761751 None:intergenic 40.0%
! ATTGGGAAGGTACACTAGAT+AGG + chr6_1:2761733-2761752 None:intergenic 40.0%
!! ACTTGTTTTCTTGGTTGGGA+AGG + chr6_1:2761765-2761784 None:intergenic 40.0%
TACTAGGTAATTGGTACACG+TGG - chr6_1:2761922-2761941 Msa0868930:intron 40.0%
ATGCCTTTGCTTTGTAGCTT+GGG + chr6_1:2762189-2762208 None:intergenic 40.0%
TATGCCTTTGCTTTGTAGCT+TGG + chr6_1:2762190-2762209 None:intergenic 40.0%
! AGGTCCCTTTGATGATACAA+TGG + chr6_1:2762219-2762238 None:intergenic 40.0%
ATTGATCATTCGAGAAGCCT+AGG - chr6_1:2762971-2762990 Msa0868930:intron 40.0%
CCTTCACTTTGGATTAACCT+AGG + chr6_1:2762991-2763010 None:intergenic 40.0%
CCTAGGTTAATCCAAAGTGA+AGG - chr6_1:2762988-2763007 Msa0868930:intron 40.0%
ATCTCATTGTCAGTTCTTCC+TGG + chr6_1:2763124-2763143 None:intergenic 40.0%
GCTCTACAATGTTGGAAACT+TGG + chr6_1:2763264-2763283 None:intergenic 40.0%
TTCCAACATTGTAGAGCCAA+TGG - chr6_1:2763267-2763286 Msa0868930:intron 40.0%
!! TTCCATTGGCTCTACAATGT+TGG + chr6_1:2763272-2763291 None:intergenic 40.0%
AAAGTTCCTTGGTATGAAGG+TGG + chr6_1:2763304-2763323 None:intergenic 40.0%
ACCTTCATACCAAGGAACTT+TGG - chr6_1:2763303-2763322 Msa0868930:intron 40.0%
TCCAAAGTTCCTTGGTATGA+AGG + chr6_1:2763307-2763326 None:intergenic 40.0%
GTTGGAAATTGAGCTGGAAA+TGG + chr6_1:2763331-2763350 None:intergenic 40.0%
! GAGGGATGATCATTGATAGT+TGG + chr6_1:2763349-2763368 None:intergenic 40.0%
CAACAATTATTGGAGCATGG+AGG - chr6_1:2763396-2763415 Msa0868930:CDS 40.0%
AATTCCTTAGCCAAAGCTGC+TGG - chr6_1:2759128-2759147 Msa0868930:CDS 45.0%
! ATTACCAGCAGCTTTGGCTA+AGG + chr6_1:2759135-2759154 None:intergenic 45.0%
GAAAAAGTTGCAGGCTTCGA+TGG - chr6_1:2759299-2759318 Msa0868930:CDS 45.0%
CTCTTCTAACATCTGGACGA+AGG + chr6_1:2759333-2759352 None:intergenic 45.0%
CTTCGTCCAGATGTTAGAAG+AGG - chr6_1:2759331-2759350 Msa0868930:CDS 45.0%
TCGAGAGAAATCTAGCCAAG+AGG - chr6_1:2759773-2759792 Msa0868930:intron 45.0%
TGTGAAAGATGCAGCAAGGT+TGG - chr6_1:2760271-2760290 Msa0868930:intron 45.0%
TGTTGCAAAGGATGTAGAGG+CGG + chr6_1:2760581-2760600 None:intergenic 45.0%
AGAGAGAGAGAGGTTGCAAA+GGG - chr6_1:2760711-2760730 Msa0868930:intron 45.0%
GGAGAGACTGATAAATGGAG+AGG - chr6_1:2760745-2760764 Msa0868930:intron 45.0%
TGTAGGAAAAGGATGCACGT+TGG + chr6_1:2761196-2761215 None:intergenic 45.0%
CTGACCTTGTCCAAGCTATT+TGG + chr6_1:2761523-2761542 None:intergenic 45.0%
CACAAGAGCCAAAAGTTGCA+TGG + chr6_1:2761656-2761675 None:intergenic 45.0%
AAGGTACACTAGATAGGGTG+TGG + chr6_1:2761727-2761746 None:intergenic 45.0%
AAGGAGTTGGAAGATTGGGA+AGG + chr6_1:2761746-2761765 None:intergenic 45.0%
TGGGAAGGAGTTGGAAGATT+GGG + chr6_1:2761750-2761769 None:intergenic 45.0%
TTGGGAAGGAGTTGGAAGAT+TGG + chr6_1:2761751-2761770 None:intergenic 45.0%
TTTCTTGGTTGGGAAGGAGT+TGG + chr6_1:2761759-2761778 None:intergenic 45.0%
! CAATTTTGGACCACCTGCAA+TGG + chr6_1:2763090-2763109 None:intergenic 45.0%
GGTGGAGAGTAAGTTTCCAT+TGG + chr6_1:2763286-2763305 None:intergenic 45.0%
TACTCTCCACCTTCATACCA+AGG - chr6_1:2763295-2763314 Msa0868930:intron 45.0%
GAAATGGCTCCAAAGTTCCT+TGG + chr6_1:2763315-2763334 None:intergenic 45.0%
! CATGGCCCTTTTCTCACTTC+AGG + chr6_1:2759047-2759066 None:intergenic 50.0%
CTGAAGTGAGAAAAGGGCCA+TGG - chr6_1:2759045-2759064 Msa0868930:CDS 50.0%
! GAGAAAAGGGCCATGGACTA+TGG - chr6_1:2759052-2759071 Msa0868930:CDS 50.0%
AGATAGAGGGAGAGAGAGGA+GGG + chr6_1:2759984-2760003 None:intergenic 50.0%
AGAGAGATAGAGGGAGAGAG+AGG + chr6_1:2759988-2760007 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr6_1:2760671-2760690 Msa0868930:intron 50.0%
GAGAGAGAGAGAGGTTGCAA+AGG - chr6_1:2760710-2760729 Msa0868930:intron 50.0%
AGAGAGAGGTTGCAAAGGGA+AGG - chr6_1:2760715-2760734 Msa0868930:intron 50.0%
TGAGAGAACTCTCACAGTCG+AGG - chr6_1:2761117-2761136 Msa0868930:intron 50.0%
GAAAAGGATGCACGTTGGAG+AGG + chr6_1:2761191-2761210 None:intergenic 50.0%
TAGGCTGAGCTCATGGAAAG+TGG - chr6_1:2761552-2761571 Msa0868930:intron 50.0%
AGGCTGAGCTCATGGAAAGT+GGG - chr6_1:2761553-2761572 Msa0868930:intron 50.0%
GAGCCCAAGCTACAAAGCAA+AGG - chr6_1:2762183-2762202 Msa0868930:intron 50.0%
ATTGGAGCATGGAGGACATC+TGG - chr6_1:2763404-2763423 Msa0868930:CDS 50.0%
ATAGAGGGAGAGAGAGGAGG+GGG + chr6_1:2759982-2760001 None:intergenic 55.0%
GATAGAGGGAGAGAGAGGAG+GGG + chr6_1:2759983-2760002 None:intergenic 55.0%
GAGATAGAGGGAGAGAGAGG+AGG + chr6_1:2759985-2760004 None:intergenic 55.0%
GGATGTAGAGGCGGTACGTA+GGG + chr6_1:2760572-2760591 None:intergenic 55.0%
AGGATGTAGAGGCGGTACGT+AGG + chr6_1:2760573-2760592 None:intergenic 55.0%
GGCTGAGCTCATGGAAAGTG+GGG - chr6_1:2761554-2761573 Msa0868930:intron 55.0%
GCTGAGCTCATGGAAAGTGG+GGG - chr6_1:2761555-2761574 Msa0868930:intron 55.0%
TAGAGGGAGAGAGAGGAGGG+GGG + chr6_1:2759981-2760000 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 2759011 2763453 2759011 ID=Msa0868930;Name=Msa0868930
chr6_1 mRNA 2759011 2763453 2759011 ID=Msa0868930-mRNA-1;Parent=Msa0868930;Name=Msa0868930-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|3|0|208
chr6_1 exon 2763315 2763453 2763315 ID=Msa0868930-mRNA-1:exon:841;Parent=Msa0868930-mRNA-1
chr6_1 exon 2763051 2763180 2763051 ID=Msa0868930-mRNA-1:exon:840;Parent=Msa0868930-mRNA-1
chr6_1 exon 2759011 2759368 2759011 ID=Msa0868930-mRNA-1:exon:839;Parent=Msa0868930-mRNA-1
chr6_1 CDS 2763315 2763453 2763315 ID=Msa0868930-mRNA-1:cds;Parent=Msa0868930-mRNA-1
chr6_1 CDS 2763051 2763180 2763051 ID=Msa0868930-mRNA-1:cds;Parent=Msa0868930-mRNA-1
chr6_1 CDS 2759011 2759368 2759011 ID=Msa0868930-mRNA-1:cds;Parent=Msa0868930-mRNA-1
Gene Sequence

>Msa0868930

ATGGATAAAAAACCGTGTAACTCATCTCAAGATCCTGAAGTGAGAAAAGGGCCATGGACTATGGAAGAAGACTTGATTTTAATCAATTATATTGCAAATCATGGTGAAGGAGTTTGGAATTCCTTAGCCAAAGCTGCTGGTCTTAAACGTACAGGAAAAAGTTGCAGGCTTCGATGGCTAAACTACCTTCGTCCAGATGTTAGAAGAGGGAATATTACACCTGAGGAACAACTTTTGATCATGGAACTTCATGCAAAGTGGGGAAATAGGTGGTCCAAAATTGCAAAGCATCTTCCAGGAAGAACTGACAATGAGATTAAGAATTTTTGGAGGACTAGGATACAAAAGCACATTAAGCAAGTTGATCATCCTCACCAAAATAATTTCCAACAAATGAGTTTAGAGATAAATGATCATCATCAATCAAGTAGTAGCCAAGTTTCCAACATTGTAGAGCCAATGGAAACTTACTCTCCACCTTCATACCAAGGAACTTTGGAGCCATTTCCAGCTCAATTTCCAACTATCAATGATCATCCCTCAAGTTGTTGTACAAATGACAACAATAACAACAATTATTGGAGCATGGAGGACATCTGGTCTATGCAATTACTCAATGGAGATTAA
Protein sequence

>Msa0868930

MDKKPCNSSQDPEVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKHIKQVDHPHQNNFQQMSLEINDHHQSSSSQVSNIVEPMETYSPPSYQGTLEPFPAQFPTINDHPSSCCTNDNNNNNYWSMEDIWSMQLLNGD*