AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0870740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0870740 MtrunA17_Chr6g0452271 96.142 337 12 1 1 337 1 336 0.0 672
Msa0870740 MtrunA17_Chr3g0103281 57.310 171 73 0 1 171 1 171 1.49e-66 212
Msa0870740 MtrunA17_Chr5g0410961 51.485 202 86 4 1 191 1 201 3.68e-63 204
Msa0870740 MtrunA17_Chr6g0453471 61.224 147 56 1 1 146 1 147 6.76e-63 204
Msa0870740 MtrunA17_Chr4g0039971 56.954 151 65 0 1 151 2 152 1.91e-62 202
Msa0870740 MtrunA17_Chr4g0048511 62.857 140 50 2 1 139 1 139 6.25e-62 201
Msa0870740 MtrunA17_Chr7g0217741 62.406 133 50 0 1 133 1 133 8.29e-62 199
Msa0870740 MtrunA17_Chr3g0115821 56.643 143 62 0 1 143 1 143 1.53e-61 200
Msa0870740 MtrunA17_Chr1g0151941 52.284 197 85 6 1 194 1 191 1.70e-61 197
Msa0870740 MtrunA17_Chr2g0281071 65.116 129 44 1 1 128 1 129 3.79e-61 199
Msa0870740 MtrunA17_Chr2g0323411 59.310 145 59 0 1 145 1 145 7.79e-61 197
Msa0870740 MtrunA17_Chr1g0193371 54.167 168 73 2 1 166 1 166 1.32e-59 196
Msa0870740 MtrunA17_Chr4g0037141 60.606 132 52 0 1 132 1 132 2.63e-59 192
Msa0870740 MtrunA17_Chr4g0057031 62.595 131 49 0 1 131 1 131 3.04e-58 189
Msa0870740 MtrunA17_Chr4g0042671 56.291 151 57 1 1 142 1 151 3.54e-58 193
Msa0870740 MtrunA17_Chr3g0117091 51.744 172 66 3 1 169 1 158 7.34e-58 190
Msa0870740 MtrunA17_Chr7g0270891 62.121 132 50 0 1 132 1 132 8.99e-58 191
Msa0870740 MtrunA17_Chr4g0058631 58.333 132 55 0 1 132 1 132 1.21e-57 190
Msa0870740 MtrunA17_Chr1g0193801 60.606 132 52 0 1 132 1 132 1.35e-57 191
Msa0870740 MtrunA17_Chr7g0228891 61.832 131 50 0 1 131 1 131 6.73e-57 186
Msa0870740 MtrunA17_Chr1g0152011 51.136 176 75 3 1 170 1 171 6.80e-57 187
Msa0870740 MtrunA17_Chr5g0435101 52.201 159 75 1 3 161 2 159 8.96e-57 183
Msa0870740 MtrunA17_Chr1g0211161 60.630 127 50 0 3 129 4 130 2.00e-56 183
Msa0870740 MtrunA17_Chr5g0395281 54.225 142 65 0 1 142 1 142 3.74e-56 184
Msa0870740 MtrunA17_Chr7g0264641 65.833 120 40 1 1 119 1 120 6.35e-56 183
Msa0870740 MtrunA17_Chr4g0028311 63.281 128 46 1 1 127 1 128 6.66e-56 184
Msa0870740 MtrunA17_Chr5g0434571 51.075 186 66 4 1 186 37 197 1.74e-55 184
Msa0870740 MtrunA17_Chr3g0110351 60.902 133 52 0 1 133 1 133 3.08e-55 182
Msa0870740 MtrunA17_Chr2g0309911 61.600 125 48 0 6 130 5 129 5.79e-55 182
Msa0870740 MtrunA17_Chr8g0349261 59.848 132 51 2 1 130 1 132 1.39e-54 180
Msa0870740 MtrunA17_Chr3g0135311 54.777 157 69 2 1 155 1 157 2.33e-54 181
Msa0870740 MtrunA17_Chr8g0385321 56.818 132 57 0 1 132 1 132 2.85e-54 180
Msa0870740 MtrunA17_Chr5g0400821 64.407 118 41 1 1 117 1 118 4.75e-54 179
Msa0870740 MtrunA17_Chr3g0131121 56.923 130 56 0 1 130 1 130 2.13e-53 177
Msa0870740 MtrunA17_Chr7g0217221 63.559 118 43 0 1 118 1 118 2.85e-52 174
Msa0870740 MtrunA17_Chr4g0054391 69.091 110 33 1 1 109 1 110 5.32e-52 174
Msa0870740 MtrunA17_Chr2g0330041 60.000 125 50 0 1 125 1 125 5.40e-52 176
Msa0870740 MtrunA17_Chr8g0387421 60.169 118 47 0 1 118 1 118 6.78e-52 174
Msa0870740 MtrunA17_Chr2g0327351 65.766 111 37 1 1 110 1 111 2.08e-51 173
Msa0870740 MtrunA17_Chr3g0121241 59.200 125 51 0 5 129 35 159 2.58e-51 172
Msa0870740 MtrunA17_Chr7g0271241 60.305 131 52 0 1 131 1 131 3.41e-51 174
Msa0870740 MtrunA17_Chr5g0397231 63.636 110 40 0 1 110 1 110 4.32e-51 172
Msa0870740 MtrunA17_Chr8g0342521 51.592 157 68 2 1 154 1 152 4.62e-51 172
Msa0870740 MtrunA17_Chr7g0275911 62.931 116 43 0 1 116 1 116 4.84e-51 170
Msa0870740 MtrunA17_Chr8g0342541 50.000 156 76 1 1 154 1 156 8.55e-51 172
Msa0870740 MtrunA17_Chr7g0254411 58.400 125 50 1 1 123 1 125 1.43e-50 171
Msa0870740 MtrunA17_Chr1g0203411 61.207 116 45 0 1 116 1 116 1.66e-50 170
Msa0870740 MtrunA17_Chr4g0072751 64.865 111 38 1 1 110 1 111 1.40e-49 169
Msa0870740 MtrunA17_Chr1g0187761 62.069 116 44 0 1 116 1 116 4.07e-49 165
Msa0870740 MtrunA17_Chr4g0060721 57.627 118 50 0 1 118 2 119 5.57e-49 167
Msa0870740 MtrunA17_Chr8g0346561 61.017 118 46 0 1 118 1 118 5.74e-49 166
Msa0870740 MtrunA17_Chr3g0092401 59.664 119 48 0 1 119 2 120 6.74e-49 166
Msa0870740 MtrunA17_Chr2g0323351 59.322 118 48 0 1 118 1 118 2.25e-48 163
Msa0870740 MtrunA17_Chr4g0068061 58.621 116 48 0 1 116 1 116 4.30e-48 165
Msa0870740 MtrunA17_Chr7g0261281 58.621 116 48 0 1 116 1 116 7.40e-48 162
Msa0870740 MtrunA17_Chr1g0167691 58.120 117 49 0 1 117 1 117 9.64e-48 161
Msa0870740 MtrunA17_Chr4g0022931 59.829 117 46 1 1 116 1 117 2.46e-47 160
Msa0870740 MtrunA17_Chr2g0311221 64.220 109 39 0 2 110 4 112 2.57e-47 162
Msa0870740 MtrunA17_Chr7g0274581 54.237 118 54 0 1 118 1 118 4.44e-47 158
Msa0870740 MtrunA17_Chr6g0453211 61.818 110 42 0 1 110 1 110 4.92e-47 161
Msa0870740 MtrunA17_Chr4g0044421 56.349 126 55 0 1 126 1 126 8.36e-47 157
Msa0870740 MtrunA17_Chr4g0070611 59.483 116 47 0 1 116 1 116 1.20e-46 160
Msa0870740 MtrunA17_Chr4g0022901 58.475 118 48 1 1 117 1 118 1.77e-46 159
Msa0870740 MtrunA17_Chr4g0070641 59.483 116 47 0 1 116 1 116 2.50e-46 155
Msa0870740 MtrunA17_Chr1g0167661 56.410 117 51 0 1 117 1 117 3.84e-46 157
Msa0870740 MtrunA17_Chr6g0487491 59.524 126 42 2 1 117 1 126 5.14e-46 157
Msa0870740 MtrunA17_Chr5g0417821 55.462 119 53 0 12 130 7 125 5.72e-46 157
Msa0870740 MtrunA17_Chr8g0342481 49.045 157 76 3 1 154 1 156 1.94e-45 159
Msa0870740 MtrunA17_Chr4g0022911 55.932 118 51 1 1 117 1 118 2.16e-45 156
Msa0870740 MtrunA17_Chr4g0032401 57.658 111 47 0 12 122 17 127 6.12e-45 156
Msa0870740 MtrunA17_Chr3g0088461 57.798 109 46 0 8 116 18 126 1.05e-43 153
Msa0870740 MtrunA17_Chr2g0328771 56.481 108 47 0 12 119 20 127 7.92e-43 150
Msa0870740 MtrunA17_Chr4g0022891 50.000 136 64 1 1 132 1 136 1.64e-42 147
Msa0870740 MtrunA17_Chr1g0194951 51.562 128 62 0 1 128 1 128 3.85e-42 150
Msa0870740 MtrunA17_Chr1g0203441 53.488 129 56 3 1 127 1 127 1.43e-41 145
Msa0870740 MtrunA17_Chr3g0093811 34.667 300 144 7 44 337 14 267 5.30e-41 144
Msa0870740 MtrunA17_Chr7g0228231 57.547 106 45 0 11 116 13 118 1.09e-40 141
Msa0870740 MtrunA17_Chr4g0022881 51.754 114 55 0 1 114 1 114 1.79e-40 142
Msa0870740 MtrunA17_Chr6g0470971 48.905 137 69 1 9 145 11 146 2.22e-40 143
Msa0870740 MtrunA17_Chr7g0247131 63.736 91 33 0 44 134 10 100 3.56e-40 142
Msa0870740 MtrunA17_Chr6g0450101 51.240 121 57 1 1 119 1 121 1.25e-39 139
Msa0870740 MtrunA17_Chr1g0209661 47.200 125 66 0 8 132 23 147 1.33e-39 142
Msa0870740 MtrunA17_Chr3g0099131 56.190 105 46 0 11 115 40 144 6.39e-39 144
Msa0870740 MtrunA17_Chr7g0269831 56.897 116 50 0 1 116 1 116 6.76e-39 141
Msa0870740 MtrunA17_Chr4g0055981 50.394 127 63 0 9 135 52 178 2.54e-38 136
Msa0870740 MtrunA17_Chr3g0080861 57.692 104 44 0 12 115 37 140 4.77e-38 142
Msa0870740 MtrunA17_Chr8g0343831 57.009 107 46 0 12 118 8 114 5.52e-38 136
Msa0870740 MtrunA17_Chr5g0434911 54.054 111 51 0 7 117 16 126 6.28e-38 136
Msa0870740 MtrunA17_Chr5g0434931 55.660 106 47 0 12 117 35 140 7.12e-38 136
Msa0870740 MtrunA17_Chr1g0168661 56.311 103 45 0 13 115 22 124 7.51e-37 133
Msa0870740 MtrunA17_Chr1g0186061 56.311 103 45 0 13 115 21 123 1.35e-36 132
Msa0870740 MtrunA17_Chr4g0042611 59.091 88 36 0 1 88 1 88 2.28e-36 126
Msa0870740 MtrunA17_Chr7g0240821 56.604 106 46 0 17 122 6 111 3.44e-36 130
Msa0870740 MtrunA17_Chr8g0354661 54.808 104 47 0 12 115 37 140 3.95e-36 137
Msa0870740 MtrunA17_Chr5g0434831 54.717 106 48 0 12 117 7 112 4.05e-36 129
Msa0870740 MtrunA17_Chr1g0180391 52.830 106 50 0 11 116 18 123 4.98e-36 130
Msa0870740 MtrunA17_Chr1g0194301 49.565 115 58 0 8 122 29 143 5.43e-36 131
Msa0870740 MtrunA17_Chr7g0220341 54.630 108 47 1 12 117 25 132 8.82e-36 130
Msa0870740 MtrunA17_Chr1g0194291 49.565 115 58 0 8 122 17 131 1.49e-35 130
Msa0870740 MtrunA17_Chr7g0228991 54.717 106 48 0 12 117 29 134 1.88e-35 130
Msa0870740 MtrunA17_Chr2g0327821 52.885 104 49 0 12 115 6 109 3.89e-35 128
Msa0870740 MtrunA17_Chr5g0434841 53.774 106 49 0 12 117 20 125 3.95e-35 130
Msa0870740 MtrunA17_Chr1g0192411 51.754 114 54 1 8 121 8 120 7.58e-35 131
Msa0870740 MtrunA17_Chr2g0322521 54.206 107 49 0 9 115 26 132 2.40e-34 130
Msa0870740 MtrunA17_Chr5g0440781 48.276 116 58 2 10 124 10 124 4.46e-34 124
Msa0870740 MtrunA17_Chr1g0154031 52.885 104 49 0 12 115 76 179 4.75e-34 129
Msa0870740 MtrunA17_Chr8g0342511 59.302 86 35 0 1 86 1 86 7.95e-34 120
Msa0870740 MtrunA17_Chr8g0360111 54.455 101 46 0 12 112 25 125 1.01e-33 125
Msa0870740 MtrunA17_Chr5g0440761 48.276 116 58 2 10 124 10 124 3.46e-33 124
Msa0870740 MtrunA17_Chr5g0441141 48.276 116 58 2 10 124 10 124 3.68e-33 124
Msa0870740 MtrunA17_Chr8g0342531 57.303 89 38 0 1 89 1 89 3.84e-33 120
Msa0870740 MtrunA17_Chr2g0293911 50.435 115 57 0 8 122 20 134 7.03e-33 124
Msa0870740 MtrunA17_Chr4g0030881 50.000 110 48 1 13 115 8 117 1.32e-32 122
Msa0870740 MtrunA17_Chr4g0068921 52.336 107 51 0 8 114 20 126 9.17e-32 117
Msa0870740 MtrunA17_Chr2g0294811 53.763 93 42 1 1 93 1 92 1.91e-31 114
Msa0870740 MtrunA17_Chr8g0342461 55.556 90 39 1 1 89 1 90 2.32e-30 112
Msa0870740 MtrunA17_Chr5g0441131 46.552 116 60 2 10 124 7 121 2.78e-30 114
Msa0870740 MtrunA17_Chr2g0323321 54.348 92 41 1 1 92 1 91 3.85e-30 111
Msa0870740 MtrunA17_Chr8g0342471 55.556 90 39 1 1 89 1 90 6.50e-30 111
Msa0870740 MtrunA17_Chr5g0401731 42.975 121 68 1 14 134 15 134 3.58e-29 114
Msa0870740 MtrunA17_Chr5g0395221 53.571 84 39 0 5 88 5 88 7.82e-29 106
Msa0870740 MtrunA17_Chr3g0099141 53.488 86 40 0 8 93 36 121 9.71e-29 108
Msa0870740 MtrunA17_Chr8g0334881 46.018 113 59 2 8 119 6 117 2.90e-28 112
Msa0870740 MtrunA17_Chr5g0429661 31.553 206 130 3 14 209 122 326 5.45e-28 112
Msa0870740 MtrunA17_Chr4g0013361 42.222 135 74 3 8 141 6 137 2.84e-27 108
Msa0870740 MtrunA17_Chr6g0454921 45.045 111 60 1 14 124 15 124 4.19e-27 106
Msa0870740 MtrunA17_Chr4g0053431 45.098 102 55 1 14 115 5 105 8.68e-27 106
Msa0870740 MtrunA17_Chr4g0008551 38.889 144 72 3 14 157 38 165 1.80e-26 107
Msa0870740 MtrunA17_Chr4g0058991 45.455 110 59 1 9 118 204 312 4.54e-26 107
Msa0870740 MtrunA17_Chr3g0117511 42.727 110 62 1 9 118 178 286 1.42e-25 106
Msa0870740 MtrunA17_Chr6g0480581 42.500 120 64 3 14 129 4 122 2.38e-25 102
Msa0870740 MtrunA17_Chr7g0229101 62.857 70 26 0 44 113 4 73 2.48e-25 101
Msa0870740 MtrunA17_Chr5g0434901 64.706 68 24 0 46 113 7 74 2.76e-25 98.6
Msa0870740 MtrunA17_Chr3g0133601 43.519 108 60 1 8 115 31 137 3.14e-25 101
Msa0870740 MtrunA17_Chr7g0238631 48.544 103 52 1 14 116 113 214 9.93e-25 104
Msa0870740 MtrunA17_Chr7g0229131 56.757 74 32 0 44 117 4 77 2.58e-24 97.4
Msa0870740 MtrunA17_Chr6g0460661 40.594 101 59 1 10 110 12 111 2.36e-23 94.7
Msa0870740 MtrunA17_Chr5g0417621 45.098 102 55 1 14 115 134 234 5.13e-23 99.0
Msa0870740 MtrunA17_Chr7g0228531 42.593 108 60 2 11 118 217 322 6.54e-23 98.6
Msa0870740 MtrunA17_Chr5g0425591 48.235 85 43 1 10 93 7 91 2.01e-22 90.1
Msa0870740 MtrunA17_Chr4g0042501 44.118 102 56 1 14 115 105 205 2.01e-22 97.4
Msa0870740 MtrunA17_Chr5g0437321 42.424 99 56 1 14 112 19 116 2.12e-22 95.1
Msa0870740 MtrunA17_Chr3g0139671 40.777 103 60 1 14 116 85 186 1.24e-20 93.2
Msa0870740 MtrunA17_Chr7g0254261 35.294 170 94 4 14 168 89 257 3.53e-20 90.1
Msa0870740 MtrunA17_Chr7g0228401 36.923 130 56 3 8 113 250 377 4.22e-20 90.9
Msa0870740 MtrunA17_Chr3g0125801 42.593 108 61 1 8 115 10 116 4.79e-20 88.6
Msa0870740 MtrunA17_Chr6g0453751 45.055 91 41 2 12 93 20 110 5.29e-20 84.7
Msa0870740 MtrunA17_Chr6g0460671 42.157 102 58 1 14 115 99 199 2.62e-19 87.4
Msa0870740 MtrunA17_Chr1g0157731 38.835 103 62 1 14 116 91 192 2.74e-19 89.0
Msa0870740 MtrunA17_Chr1g0177901 43.956 91 47 2 23 113 6 92 7.65e-19 83.6
Msa0870740 MtrunA17_Chr7g0228481 38.835 103 61 2 11 113 217 317 8.48e-19 86.7
Msa0870740 MtrunA17_Chr5g0397841 42.857 98 54 2 12 109 109 204 4.19e-18 85.1
Msa0870740 MtrunA17_Chr7g0238651 40.404 99 57 1 14 110 7 105 9.72e-18 83.2
Msa0870740 MtrunA17_Chr7g0233061 36.207 116 59 3 10 119 176 282 2.08e-16 79.3
Msa0870740 MtrunA17_Chr5g0395231 58.824 51 21 0 78 128 5 55 3.82e-16 77.0
Msa0870740 MtrunA17_Chr8g0362231 37.719 114 69 2 17 130 25 136 1.24e-15 77.4
Msa0870740 MtrunA17_Chr5g0416341 37.374 99 61 1 17 115 29 126 7.31e-15 75.1
Msa0870740 MtrunA17_Chr3g0104491 40.404 99 50 4 53 144 1 97 2.69e-14 72.4
Msa0870740 MtrunA17_Chr1g0193901 52.308 65 28 2 5 66 2 66 2.76e-14 68.6
Msa0870740 MtrunA17_Chr1g0193891 52.308 65 28 2 5 66 2 66 2.76e-14 68.6
Msa0870740 MtrunA17_Chr1g0193871 52.308 65 28 2 5 66 2 66 2.76e-14 68.6
Msa0870740 MtrunA17_Chr1g0193881 52.308 65 28 2 5 66 2 66 2.76e-14 68.6
Msa0870740 MtrunA17_Chr3g0145551 70.000 40 12 0 92 131 2 41 2.80e-14 67.4
Msa0870740 MtrunA17_Chr4g0042621 52.381 63 21 1 89 142 15 77 3.93e-14 72.4
Msa0870740 MtrunA17_Chr5g0434871 61.364 44 17 0 74 117 2 45 7.82e-14 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0870740 AT3G28470.1 48.588 354 128 10 1 337 1 317 2.02e-87 266
Msa0870740 AT5G56110.1 55.747 174 77 0 1 174 1 174 1.90e-67 214
Msa0870740 AT5G15310.4 63.768 138 49 1 1 137 1 138 9.15e-64 202
Msa0870740 AT5G16770.4 57.895 152 64 0 1 152 1 152 1.01e-63 205
Msa0870740 AT5G16770.3 57.895 152 64 0 1 152 1 152 1.01e-63 205
Msa0870740 AT5G16770.1 57.895 152 64 0 1 152 1 152 1.91e-63 205
Msa0870740 AT5G16770.2 57.895 152 64 0 1 152 1 152 1.91e-63 205
Msa0870740 AT5G15310.2 51.042 192 79 4 1 177 1 192 1.94e-63 204
Msa0870740 AT5G15310.1 63.768 138 49 1 1 137 1 138 2.36e-63 204
Msa0870740 AT3G02940.2 65.625 128 44 0 1 128 1 128 2.94e-63 203
Msa0870740 AT3G02940.1 65.625 128 44 0 1 128 1 128 6.68e-63 203
Msa0870740 AT3G02940.3 65.625 128 44 0 1 128 1 128 6.68e-63 203
Msa0870740 AT3G01140.2 64.179 134 48 0 1 134 1 134 6.94e-63 204
Msa0870740 AT4G21440.1 59.060 149 57 1 1 149 1 145 8.99e-62 201
Msa0870740 AT4G05100.1 66.667 129 42 1 1 128 1 129 1.00e-61 200
Msa0870740 AT5G10280.1 56.944 144 62 0 1 144 1 144 3.51e-61 199
Msa0870740 AT1G57560.1 55.828 163 66 2 1 158 1 162 6.61e-61 197
Msa0870740 AT4G28110.1 64.844 128 45 0 1 128 1 128 9.45e-61 196
Msa0870740 AT1G09540.1 62.687 134 50 0 1 134 1 134 3.90e-60 197
Msa0870740 AT1G34670.1 57.343 143 61 0 1 143 1 143 5.17e-60 197
Msa0870740 AT3G01140.1 63.846 130 47 0 5 134 48 177 1.33e-59 196
Msa0870740 AT1G57560.2 61.832 131 50 0 1 131 1 131 4.95e-59 191
Msa0870740 AT5G26660.1 63.566 129 47 0 1 129 1 129 5.43e-59 194
Msa0870740 AT4G38620.1 60.305 131 52 0 1 131 1 131 3.05e-58 189
Msa0870740 AT5G65230.1 59.398 133 54 0 1 133 1 133 5.45e-58 190
Msa0870740 AT4G22680.1 57.639 144 61 0 1 144 1 144 7.48e-58 188
Msa0870740 AT4G34990.1 58.333 132 55 0 1 132 1 132 1.53e-57 187
Msa0870740 AT2G16720.1 57.664 137 57 1 1 136 1 137 2.84e-57 187
Msa0870740 AT3G61250.1 59.690 129 52 0 1 129 1 129 3.01e-57 187
Msa0870740 AT4G17785.2 55.333 150 66 1 1 149 1 150 3.08e-57 189
Msa0870740 AT5G61420.2 58.462 130 54 0 1 130 1 130 3.48e-57 189
Msa0870740 AT4G12350.1 54.305 151 69 0 1 151 1 151 3.79e-57 187
Msa0870740 AT4G17785.1 55.333 150 66 1 1 149 1 150 4.71e-57 189
Msa0870740 AT4G01680.3 59.848 132 53 0 1 132 1 132 2.69e-56 183
Msa0870740 AT4G09460.1 57.252 131 56 0 1 131 1 131 6.94e-56 182
Msa0870740 AT4G01680.1 59.848 132 53 0 1 132 1 132 8.63e-56 185
Msa0870740 AT1G22640.1 47.647 170 80 1 1 170 1 161 9.90e-56 182
Msa0870740 AT5G60890.1 58.140 129 54 0 1 129 1 129 1.26e-55 183
Msa0870740 AT5G07690.1 57.692 130 55 0 1 130 1 130 2.05e-55 184
Msa0870740 AT1G66230.1 60.606 132 52 0 1 132 1 132 2.47e-55 182
Msa0870740 AT5G07700.1 42.727 220 86 4 1 220 1 180 2.98e-55 184
Msa0870740 AT5G07700.2 42.727 220 86 4 1 220 1 180 2.98e-55 184
Msa0870740 AT5G16600.1 52.023 173 76 2 1 170 1 169 4.22e-55 183
Msa0870740 AT3G49690.1 66.102 118 39 1 1 117 1 118 8.20e-55 182
Msa0870740 AT5G54230.1 60.156 128 51 0 1 128 1 128 4.72e-54 180
Msa0870740 AT1G18570.1 59.542 131 52 1 1 130 1 131 4.92e-54 181
Msa0870740 AT2G36890.1 53.846 169 75 2 1 168 1 167 6.35e-54 179
Msa0870740 AT5G57620.1 64.407 118 41 1 1 117 1 118 6.99e-54 180
Msa0870740 AT1G35515.1 56.589 129 56 0 1 129 1 129 7.77e-54 176
Msa0870740 AT5G23000.1 66.949 118 38 1 1 117 1 118 1.14e-53 179
Msa0870740 AT2G36890.2 53.846 169 75 2 1 168 42 208 1.64e-53 179
Msa0870740 AT5G14340.1 57.576 132 56 0 1 132 13 144 2.32e-53 177
Msa0870740 AT1G63910.1 52.817 142 67 0 1 142 1 142 3.54e-53 179
Msa0870740 AT5G65790.1 65.254 118 40 1 1 117 1 118 4.43e-53 179
Msa0870740 AT3G12720.1 61.157 121 47 0 6 126 16 136 1.80e-52 176
Msa0870740 AT3G13540.1 59.200 125 51 0 5 129 16 140 1.88e-52 174
Msa0870740 AT4G01680.2 54.861 144 53 1 1 132 1 144 2.31e-52 176
Msa0870740 AT2G31180.1 50.641 156 66 1 1 145 1 156 5.94e-52 172
Msa0870740 AT1G74430.1 55.385 130 58 0 1 130 1 130 6.38e-52 173
Msa0870740 AT3G23250.1 61.207 116 45 0 1 116 1 116 9.84e-52 173
Msa0870740 AT3G13890.2 56.835 139 60 0 1 139 1 139 1.02e-51 175
Msa0870740 AT3G47600.1 61.345 119 46 0 1 119 1 119 2.82e-51 173
Msa0870740 AT4G37780.1 61.864 118 44 1 1 117 1 118 3.47e-51 172
Msa0870740 AT1G74080.1 56.589 129 56 0 1 129 1 129 3.53e-51 173
Msa0870740 AT1G08810.1 61.017 118 46 0 1 118 1 118 8.72e-51 170
Msa0870740 AT5G62320.1 56.204 137 53 1 2 131 3 139 2.16e-50 168
Msa0870740 AT1G74650.1 60.504 119 47 0 1 119 1 119 3.74e-50 170
Msa0870740 AT1G18710.1 53.488 129 60 0 1 129 1 129 3.78e-50 168
Msa0870740 AT5G62470.2 59.664 119 48 0 1 119 1 119 6.07e-50 170
Msa0870740 AT3G28910.1 59.836 122 49 0 1 122 1 122 2.68e-49 168
Msa0870740 AT2G47460.1 56.391 133 58 0 1 133 1 133 5.00e-49 168
Msa0870740 AT1G79180.1 60.684 117 46 0 2 118 4 120 6.14e-49 166
Msa0870740 AT3G13890.1 53.378 148 60 1 1 139 1 148 1.09e-48 167
Msa0870740 AT1G06180.1 59.483 116 47 0 1 116 1 116 2.49e-48 163
Msa0870740 AT5G62470.1 59.664 119 47 1 1 119 1 118 2.75e-48 166
Msa0870740 AT1G16490.1 44.068 177 96 1 2 175 4 180 1.22e-47 162
Msa0870740 AT5G49330.1 58.621 116 48 0 1 116 1 116 1.28e-46 161
Msa0870740 AT3G62610.1 57.759 116 49 0 1 116 1 116 1.72e-46 161
Msa0870740 AT1G56160.1 57.391 115 49 0 2 116 4 118 1.63e-45 157
Msa0870740 AT5G12870.1 60.185 108 43 0 12 119 18 125 2.73e-45 156
Msa0870740 AT5G52600.1 54.615 130 50 1 9 129 9 138 6.88e-44 150
Msa0870740 AT3G12820.1 57.759 116 49 0 3 118 5 120 7.62e-44 151
Msa0870740 AT5G14750.1 63.462 104 38 0 13 116 17 120 8.74e-44 150
Msa0870740 AT3G27920.1 61.905 105 40 0 13 117 15 119 5.60e-43 148
Msa0870740 AT1G79180.2 46.667 150 47 1 2 118 4 153 1.79e-42 150
Msa0870740 AT5G40330.1 62.500 104 39 0 13 116 13 116 2.83e-42 146
Msa0870740 AT3G08500.1 56.881 109 47 0 8 116 26 134 5.70e-42 149
Msa0870740 AT4G25560.1 57.547 106 45 0 13 118 11 116 9.79e-41 144
Msa0870740 AT5G40350.1 55.963 109 48 0 12 120 17 125 1.04e-40 142
Msa0870740 AT5G35550.1 46.980 149 65 2 9 157 11 145 1.88e-40 143
Msa0870740 AT3G27810.1 41.436 181 98 5 12 191 20 193 8.39e-40 140
Msa0870740 AT2G32460.2 57.692 104 44 0 12 115 6 109 1.51e-39 145
Msa0870740 AT2G32460.1 57.692 104 44 0 12 115 18 121 1.78e-39 145
Msa0870740 AT4G26930.1 56.364 110 47 1 12 121 19 127 3.62e-39 143
Msa0870740 AT1G18960.1 32.653 343 161 11 17 337 13 307 5.59e-39 140
Msa0870740 AT3G01530.1 55.238 105 47 0 12 116 25 129 9.32e-39 137
Msa0870740 AT5G55020.1 57.273 110 46 1 12 121 26 134 1.67e-38 143
Msa0870740 AT1G25340.1 49.180 122 62 0 13 134 19 140 2.56e-38 138
Msa0870740 AT2G26960.1 43.949 157 83 2 9 161 17 172 4.74e-38 140
Msa0870740 AT5G26660.2 66.667 87 29 0 43 129 12 98 8.57e-38 137
Msa0870740 AT1G48000.1 42.759 145 75 2 12 148 32 176 1.62e-37 135
Msa0870740 AT3G48920.1 52.830 106 50 0 9 114 15 120 1.95e-37 135
Msa0870740 AT4G13480.1 58.252 103 43 0 13 115 7 109 2.96e-37 134
Msa0870740 AT5G52260.1 56.364 110 48 0 9 118 9 118 4.40e-37 134
Msa0870740 AT3G11440.2 51.402 107 52 0 9 115 38 144 6.61e-37 138
Msa0870740 AT3G24310.1 57.282 103 44 0 13 115 19 121 1.48e-36 133
Msa0870740 AT3G11440.3 51.402 107 52 0 9 115 38 144 2.03e-36 138
Msa0870740 AT3G11440.4 51.402 107 52 0 9 115 38 144 2.03e-36 138
Msa0870740 AT3G11440.1 51.402 107 52 0 9 115 38 144 2.03e-36 138
Msa0870740 AT3G30210.1 56.863 102 44 0 13 114 28 129 2.70e-36 132
Msa0870740 AT5G06100.1 52.778 108 51 0 8 115 28 135 3.02e-36 136
Msa0870740 AT2G47190.1 35.266 207 123 4 4 200 12 217 3.16e-36 132
Msa0870740 AT1G68320.1 45.070 142 70 1 12 145 19 160 4.39e-36 132
Msa0870740 AT5G06100.5 52.778 108 51 0 8 115 28 135 9.04e-36 136
Msa0870740 AT5G06100.2 52.778 108 51 0 8 115 28 135 9.04e-36 136
Msa0870740 AT5G06100.3 52.778 108 51 0 8 115 28 135 9.04e-36 136
Msa0870740 AT5G06100.4 52.778 108 51 0 8 115 28 135 9.04e-36 136
Msa0870740 AT5G59780.3 53.398 103 48 0 13 115 9 111 8.49e-34 124
Msa0870740 AT1G25340.2 46.721 122 60 1 13 134 19 135 8.76e-34 125
Msa0870740 AT3G46130.1 52.427 103 49 0 13 115 10 112 1.70e-33 124
Msa0870740 AT1G25340.3 46.721 122 60 1 13 134 19 135 1.70e-33 125
Msa0870740 AT1G66370.1 50.435 115 53 1 1 115 1 111 2.21e-33 124
Msa0870740 AT3G06490.1 51.304 115 56 0 8 122 15 129 1.64e-32 124
Msa0870740 AT1G66380.1 54.808 104 47 0 12 115 8 111 1.22e-31 116
Msa0870740 AT5G49620.1 49.565 115 58 0 8 122 22 136 3.27e-31 120
Msa0870740 AT1G56650.1 43.885 139 68 1 12 150 8 136 3.18e-30 115
Msa0870740 AT3G53200.1 49.038 104 53 0 12 115 9 112 4.22e-30 115
Msa0870740 AT1G66390.1 53.846 104 48 0 12 115 8 111 8.72e-30 114
Msa0870740 AT5G14750.3 58.511 94 30 3 23 116 2 86 2.63e-29 111
Msa0870740 AT5G35550.2 50.442 113 42 2 45 157 50 148 2.94e-28 110
Msa0870740 AT2G26950.1 43.363 113 63 1 9 121 13 124 4.00e-28 113
Msa0870740 AT1G22640.3 44.643 112 53 1 59 170 2 104 9.42e-28 107
Msa0870740 AT5G49620.2 44.186 129 58 1 8 122 22 150 1.09e-27 110
Msa0870740 AT5G40350.2 59.211 76 31 0 45 120 5 80 1.60e-27 106
Msa0870740 AT5G59780.2 61.644 73 28 0 43 115 18 90 2.81e-27 107
Msa0870740 AT3G46130.3 62.500 72 27 0 44 115 9 80 3.00e-27 107
Msa0870740 AT3G46130.4 61.644 73 28 0 43 115 18 90 4.24e-27 107
Msa0870740 AT3G47600.2 62.667 75 28 0 45 119 39 113 4.58e-27 109
Msa0870740 AT3G27810.2 39.865 148 81 5 45 191 4 144 8.85e-27 104
Msa0870740 AT3G60460.1 43.750 112 61 2 9 119 8 118 1.64e-26 107
Msa0870740 AT3G27785.1 44.860 107 58 1 9 115 184 289 2.70e-26 108
Msa0870740 AT1G71030.2 55.844 77 34 0 51 127 5 81 2.83e-26 103
Msa0870740 AT3G12820.2 64.789 71 25 0 48 118 2 72 3.40e-26 103
Msa0870740 AT1G71030.1 55.844 77 34 0 51 127 19 95 3.79e-26 103
Msa0870740 AT3G50060.1 46.078 102 54 1 14 115 6 106 8.24e-26 105
Msa0870740 AT5G11050.1 43.810 105 58 1 11 115 102 205 1.80e-25 106
Msa0870740 AT2G23290.1 46.078 102 54 1 14 115 13 113 2.11e-25 104
Msa0870740 AT5G67300.1 46.078 102 54 1 14 115 6 106 3.44e-25 103
Msa0870740 AT4G18770.1 40.909 110 64 1 9 118 212 320 3.59e-25 105
Msa0870740 AT5G58850.1 43.810 105 58 1 11 115 102 205 3.62e-25 105
Msa0870740 AT5G40360.1 42.718 103 58 1 12 114 156 257 7.09e-25 103
Msa0870740 AT4G37260.1 45.098 102 55 1 14 115 13 113 8.07e-25 102
Msa0870740 AT1G69560.1 44.444 108 59 1 9 116 102 208 8.88e-25 102
Msa0870740 AT1G69560.2 44.444 108 59 1 9 116 118 224 1.02e-24 103
Msa0870740 AT3G53200.2 58.904 73 30 0 43 115 7 79 1.77e-24 99.4
Msa0870740 AT2G39880.1 46.729 107 55 2 9 115 46 150 8.04e-24 100
Msa0870740 AT1G17950.1 46.078 102 54 1 14 115 5 105 8.67e-24 98.6
Msa0870740 AT5G02320.1 45.631 103 55 1 14 116 127 228 1.60e-23 101
Msa0870740 AT5G02320.2 45.631 103 55 1 14 116 127 228 1.60e-23 101
Msa0870740 AT5G02320.3 45.631 103 55 1 14 116 67 168 2.17e-23 100
Msa0870740 AT3G09370.2 45.098 102 55 1 14 115 135 235 3.53e-23 100
Msa0870740 AT3G09370.1 45.098 102 55 1 14 115 130 230 4.10e-23 100
Msa0870740 AT3G09370.3 45.098 102 55 1 14 115 143 243 4.80e-23 100
Msa0870740 AT3G09230.1 44.231 104 57 1 14 117 55 157 4.84e-23 99.0
Msa0870740 AT3G55730.1 44.860 107 56 2 14 119 56 160 5.88e-23 99.0
Msa0870740 AT1G26780.1 44.118 102 56 1 14 115 98 198 8.62e-23 96.7
Msa0870740 AT1G26780.2 44.118 102 56 1 14 115 98 198 1.59e-22 97.1
Msa0870740 AT5G17800.1 44.118 102 56 1 14 115 93 193 2.91e-22 95.9
Msa0870740 AT2G25230.1 38.983 118 69 2 9 124 21 137 4.17e-22 93.6
Msa0870740 AT1G66380.3 62.500 72 27 0 44 115 7 78 6.54e-22 89.4
Msa0870740 AT5G14750.4 67.241 58 19 0 59 116 2 59 4.45e-21 88.2
Msa0870740 AT5G14750.2 67.241 58 19 0 59 116 2 59 4.45e-21 88.2
Msa0870740 AT3G29020.1 39.806 103 61 1 14 116 65 166 6.67e-21 90.1
Msa0870740 AT1G73410.1 46.078 102 54 1 14 115 6 106 1.35e-20 89.7
Msa0870740 AT3G29020.2 39.806 103 61 1 14 116 67 168 1.69e-20 90.5
Msa0870740 AT5G11510.2 34.058 138 90 1 14 151 81 217 2.05e-20 92.8
Msa0870740 AT5G11510.5 34.058 138 90 1 14 151 81 217 2.10e-20 92.8
Msa0870740 AT5G11510.3 39.806 103 61 1 14 116 81 182 2.49e-20 92.8
Msa0870740 AT5G11510.1 39.806 103 61 1 14 116 81 182 2.49e-20 92.8
Msa0870740 AT5G11510.4 39.806 103 61 1 14 116 81 182 2.49e-20 92.8
Msa0870740 AT4G33450.1 40.187 107 63 1 9 115 14 119 2.54e-20 89.0
Msa0870740 AT1G73410.2 46.078 102 54 1 14 115 6 106 2.91e-20 87.8
Msa0870740 AT3G23250.2 60.345 58 23 0 59 116 2 59 1.24e-19 86.7
Msa0870740 AT4G32730.1 38.835 103 62 1 14 116 87 188 4.77e-19 88.6
Msa0870740 AT4G32730.5 38.835 103 62 1 14 116 87 188 5.59e-19 88.6
Msa0870740 AT4G32730.4 38.835 103 62 1 14 116 87 188 5.59e-19 88.6
Msa0870740 AT4G32730.3 38.835 103 62 1 14 116 87 188 5.59e-19 88.6
Msa0870740 AT4G32730.2 38.835 103 62 1 14 116 87 188 5.59e-19 88.6
Msa0870740 AT5G40430.1 38.393 112 67 2 9 120 49 158 2.04e-18 84.0
Msa0870740 AT5G61420.1 64.000 50 18 0 81 130 2 51 3.36e-18 84.0
Msa0870740 AT5G15310.3 66.667 51 16 1 88 137 9 59 8.13e-17 79.3
Msa0870740 AT1G66380.2 43.210 81 46 0 12 92 8 88 2.01e-16 74.7
Msa0870740 AT2G37630.1 40.000 100 58 1 13 110 3 102 2.20e-16 79.7
Msa0870740 AT4G28110.2 70.732 41 12 0 88 128 4 44 3.88e-16 76.3
Msa0870740 AT5G39700.1 34.266 143 84 2 15 157 57 189 1.21e-15 74.7
Msa0870740 AT4G00540.2 35.185 108 66 2 12 116 101 207 2.88e-15 76.6
Msa0870740 AT4G00540.1 35.185 108 66 2 12 116 99 205 3.93e-15 76.3
Msa0870740 AT2G02820.3 36.364 99 62 1 17 115 33 130 4.91e-15 75.5
Msa0870740 AT2G02820.1 36.364 99 62 1 17 115 33 130 6.21e-15 75.9
Msa0870740 AT2G02820.2 36.364 99 62 1 17 115 33 130 9.48e-15 75.5
Msa0870740 AT5G59780.1 60.870 46 18 0 70 115 1 46 1.22e-14 71.2
Msa0870740 AT1G14350.2 36.364 99 62 1 17 115 28 125 1.28e-14 74.7
Msa0870740 AT1G14350.1 36.364 99 62 1 17 115 28 125 1.28e-14 74.7
Msa0870740 AT3G46130.2 60.870 46 18 0 70 115 1 46 1.73e-14 71.6
Msa0870740 AT4G25560.2 58.333 48 20 0 71 118 3 50 3.53e-14 71.2
Msa0870740 AT1G22640.2 38.554 83 42 1 88 170 16 89 4.08e-14 70.5
Msa0870740 AT1G74430.2 51.852 54 26 0 77 130 8 61 5.86e-14 70.1
Msa0870740 AT5G14340.2 50.943 53 25 1 81 132 2 54 2.73e-13 67.8
Msa0870740 AT1G74650.3 60.465 43 17 0 77 119 1 43 1.44e-11 64.3
Msa0870740 AT3G28910.2 56.522 46 20 0 77 122 1 46 3.85e-11 62.8

Find 57 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATCACTATTGAAATTAT+TGG 0.125380 6_1:+5344781 None:intergenic
GGCAACATTTCCAGAAATTT+TGG 0.126640 6_1:-5344609 Msa0870740:CDS
TTCATTTGTGGATGGTATTT+TGG 0.129696 6_1:-5344651 Msa0870740:CDS
CTCTCAAAACAACCTAATTT+TGG 0.147885 6_1:-5345143 Msa0870740:CDS
AAGAAAGAAGCTTATGAAAA+TGG 0.185126 6_1:-5345245 Msa0870740:CDS
ATGTCATCATTGAGCCTTTC+AGG 0.188665 6_1:-5344830 Msa0870740:CDS
AAAGAAGCATCCAAAATTTC+TGG 0.229497 6_1:+5344599 None:intergenic
GAGCTGATTATTACCCTTCA+TGG 0.280333 6_1:-5346328 Msa0870740:CDS
ACAATGATGTCAAGAATTAT+TGG 0.314255 6_1:-5345279 Msa0870740:CDS
ACATCATTGTCTGTTCTTCC+AGG 0.314381 6_1:+5345292 None:intergenic
AAATTAATTCTAACTTTGAT+TGG 0.317413 6_1:-5344931 Msa0870740:CDS
CCAATTTCCAATTCCATGAT+TGG 0.323465 6_1:+5346765 None:intergenic
GAAACTGGCTTATGAGTTAC+TGG 0.324766 6_1:+5345214 None:intergenic
ATTACCCTTCATGGAGCTAT+AGG 0.324847 6_1:-5346319 Msa0870740:CDS
TCAGAAATCACTTGTGAAAC+TGG 0.330362 6_1:+5345199 None:intergenic
GGACAAGGACAGTGAGATTA+GGG 0.332557 6_1:-5344630 Msa0870740:CDS
CTAATGTGAAAAGAGGTTTA+TGG 0.335428 6_1:-5346825 Msa0870740:CDS
CCAATCATGGAATTGGAAAT+TGG 0.338514 6_1:-5346765 Msa0870740:CDS
TATGTAGCCAATCATGGAAT+TGG 0.348613 6_1:-5346772 Msa0870740:CDS
ATCAACTTGATATTCTTTGC+TGG 0.355936 6_1:+5344706 None:intergenic
AATTCTCTTGGTTTGTGAAT+TGG 0.359504 6_1:+5345065 None:intergenic
TGGACAAGGACAGTGAGATT+AGG 0.386964 6_1:-5344631 Msa0870740:CDS
ATAGGTGTGGTAAGAGTTGC+AGG 0.392561 6_1:-5346414 Msa0870740:CDS
GCTTAACCTAGTGAGATTAG+AGG 0.394233 6_1:+5344991 None:intergenic
CATGTTGTTGGAAATTCTCT+TGG 0.405895 6_1:+5345053 None:intergenic
TCCAATAATTTCAATAGTGA+TGG 0.428001 6_1:-5344782 Msa0870740:CDS
CTTCACTTAAGACATGTTGT+TGG 0.429030 6_1:+5345041 None:intergenic
AGAAAGAAGCTTATGAAAAT+GGG 0.435037 6_1:-5345244 Msa0870740:CDS
CTTGCTTATGTAGCCAATCA+TGG 0.462672 6_1:-5346778 Msa0870740:CDS
GATAAGACTAATGTGAAAAG+AGG 0.471476 6_1:-5346832 Msa0870740:CDS
TCACAAGTGATTTCTGACTT+AGG 0.476952 6_1:-5345193 Msa0870740:CDS
CATCTTCCTCTAATCTCACT+AGG 0.484654 6_1:-5344997 Msa0870740:CDS
ATAATCAGCTCTTCTTCCTC+AGG 0.485175 6_1:+5346340 None:intergenic
TGTATGTCACATTGTTGAAT+CGG 0.491930 6_1:+5344860 None:intergenic
AAACTATCATGCTTGAGATC+AGG 0.493104 6_1:+5346367 None:intergenic
TGAATCTCGGTCCACACTAA+AGG 0.507802 6_1:+5344884 None:intergenic
GTGTTGCAAGAGTACGAAAT+CGG 0.514008 6_1:+5344965 None:intergenic
TTCAACAATGTGACATACAA+AGG 0.521243 6_1:-5344856 Msa0870740:CDS
TTGTTGAATCGGTTGAATCT+CGG 0.522665 6_1:+5344871 None:intergenic
AAACAAGGTGGTTCAAGTGA+AGG 0.532114 6_1:-5344752 Msa0870740:CDS
TGCTTCCTATAGCTCCATGA+AGG 0.532634 6_1:+5346314 None:intergenic
TCAGGTATAATGCAAAATGA+AGG 0.541879 6_1:-5344812 Msa0870740:CDS
ACAGCTGTTCCAAAGAAAGC+AGG 0.547976 6_1:-5346742 Msa0870740:intron
TCAGGGAATTCATTTGTGGA+TGG 0.549178 6_1:-5344659 Msa0870740:CDS
TCAACAATGTGACATACAAA+GGG 0.560280 6_1:-5344855 Msa0870740:CDS
TTCATGGAGCTATAGGAAGC+AGG 0.564282 6_1:-5346312 Msa0870740:intron
CAAGTTGATAAGAAGTGTGA+AGG 0.566295 6_1:-5344692 Msa0870740:CDS
TGAATTTGATGAGGTTGCAA+TGG 0.572172 6_1:+5345094 None:intergenic
TTTGAGAGTTTGTGCTTGTG+AGG 0.591112 6_1:+5345158 None:intergenic
TGGTGATATTGAATTTGATG+AGG 0.618333 6_1:+5345085 None:intergenic
ACAATGATGAGCCTTTAGTG+TGG 0.648778 6_1:-5344895 Msa0870740:CDS
ACATTAGTCTTATCACAACA+AGG 0.651452 6_1:+5346841 None:intergenic
AAGAGGTTTATGGACTCCTG+AGG 0.664726 6_1:-5346815 Msa0870740:CDS
GCTTCCTATAGCTCCATGAA+GGG 0.674390 6_1:+5346315 None:intergenic
AGTGATGGAAATGATAAACA+AGG 0.685979 6_1:-5344767 Msa0870740:CDS
GATGGAAATGATAAACAAGG+TGG 0.686684 6_1:-5344764 Msa0870740:CDS
TTAGTCTTATCACAACAAGG+AGG 0.797603 6_1:+5346844 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAGATGTATAAAAAAA+TGG + chr6_1:5345196-5345215 None:intergenic 10.0%
!! CAAAATTAAATAAAAAGAAA+GGG + chr6_1:5345625-5345644 None:intergenic 10.0%
!! ACAAAATTAAATAAAAAGAA+AGG + chr6_1:5345626-5345645 None:intergenic 10.0%
!!! TTTTTAGATGTATAAAAAAA+TGG + chr6_1:5345196-5345215 None:intergenic 10.0%
!! CAAAATTAAATAAAAAGAAA+GGG + chr6_1:5345625-5345644 None:intergenic 10.0%
!! ACAAAATTAAATAAAAAGAA+AGG + chr6_1:5345626-5345645 None:intergenic 10.0%
!! TACATCAAGAAAATTAAATA+AGG + chr6_1:5345572-5345591 None:intergenic 15.0%
!! AAAACAATAAAATCAATGTT+TGG + chr6_1:5346091-5346110 None:intergenic 15.0%
!!! GTTTTTTTAATTAATGTAGA+TGG - chr6_1:5346106-5346125 Msa0870740:intron 15.0%
!! AAATTAATTCTAACTTTGAT+TGG - chr6_1:5346511-5346530 Msa0870740:intron 15.0%
!! TACATCAAGAAAATTAAATA+AGG + chr6_1:5345572-5345591 None:intergenic 15.0%
!! AAAACAATAAAATCAATGTT+TGG + chr6_1:5346091-5346110 None:intergenic 15.0%
!!! GTTTTTTTAATTAATGTAGA+TGG - chr6_1:5346106-5346125 Msa0870740:intron 15.0%
!! AAATTAATTCTAACTTTGAT+TGG - chr6_1:5346511-5346530 Msa0870740:intron 15.0%
!! ATCTCAAATCTTATATATTG+AGG - chr6_1:5344819-5344838 Msa0870740:CDS 20.0%
!! TTTCAAACTATTTATGAACA+TGG + chr6_1:5344877-5344896 None:intergenic 20.0%
!! ATTATATAATACTCAGTATC+CGG + chr6_1:5344950-5344969 None:intergenic 20.0%
!! AAAAAAATGCATAATTCACA+TGG - chr6_1:5345278-5345297 Msa0870740:CDS 20.0%
!! AAAAAATGCATAATTCACAT+GGG - chr6_1:5345279-5345298 Msa0870740:CDS 20.0%
!!! CTATATGTTTTAGTATAACA+TGG - chr6_1:5345316-5345335 Msa0870740:CDS 20.0%
!! GAAAATGAGATTTAATATCT+AGG - chr6_1:5345414-5345433 Msa0870740:intron 20.0%
!!! TTTTTACTTATAATTGAGAC+TGG + chr6_1:5345507-5345526 None:intergenic 20.0%
!!! TTGAAAACCTGTTTTATTAA+AGG - chr6_1:5345646-5345665 Msa0870740:intron 20.0%
!!! TGAAAACCTGTTTTATTAAA+GGG - chr6_1:5345647-5345666 Msa0870740:intron 20.0%
!! AAAATACCCTTTAATAAAAC+AGG + chr6_1:5345656-5345675 None:intergenic 20.0%
!!! GAGTTTTAAATGTATCAAAA+TGG - chr6_1:5345847-5345866 Msa0870740:intron 20.0%
!!! TTTTAAATGTATCAAAATGG+AGG - chr6_1:5345850-5345869 Msa0870740:intron 20.0%
!!! TCTTATCGTTTTTTAATTTG+TGG + chr6_1:5345881-5345900 None:intergenic 20.0%
!!! TGTTAAATTTTACTTAGTGT+TGG + chr6_1:5345964-5345983 None:intergenic 20.0%
!!! TTATGATCTTTTATCTCAAA+AGG + chr6_1:5346049-5346068 None:intergenic 20.0%
!!! TTGGAATGTGATTTTAAATT+AGG + chr6_1:5346072-5346091 None:intergenic 20.0%
!! ATCTCAAATCTTATATATTG+AGG - chr6_1:5344819-5344838 Msa0870740:CDS 20.0%
!! TTTCAAACTATTTATGAACA+TGG + chr6_1:5344877-5344896 None:intergenic 20.0%
!! ATTATATAATACTCAGTATC+CGG + chr6_1:5344950-5344969 None:intergenic 20.0%
!! AAAAAAATGCATAATTCACA+TGG - chr6_1:5345278-5345297 Msa0870740:CDS 20.0%
!! AAAAAATGCATAATTCACAT+GGG - chr6_1:5345279-5345298 Msa0870740:CDS 20.0%
!!! CTATATGTTTTAGTATAACA+TGG - chr6_1:5345316-5345335 Msa0870740:CDS 20.0%
!! GAAAATGAGATTTAATATCT+AGG - chr6_1:5345414-5345433 Msa0870740:intron 20.0%
!!! TTTTTACTTATAATTGAGAC+TGG + chr6_1:5345507-5345526 None:intergenic 20.0%
!!! TTGAAAACCTGTTTTATTAA+AGG - chr6_1:5345646-5345665 Msa0870740:intron 20.0%
!!! TGAAAACCTGTTTTATTAAA+GGG - chr6_1:5345647-5345666 Msa0870740:intron 20.0%
!! AAAATACCCTTTAATAAAAC+AGG + chr6_1:5345656-5345675 None:intergenic 20.0%
!!! GAGTTTTAAATGTATCAAAA+TGG - chr6_1:5345847-5345866 Msa0870740:intron 20.0%
!!! TTTTAAATGTATCAAAATGG+AGG - chr6_1:5345850-5345869 Msa0870740:intron 20.0%
!!! TCTTATCGTTTTTTAATTTG+TGG + chr6_1:5345881-5345900 None:intergenic 20.0%
!!! TGTTAAATTTTACTTAGTGT+TGG + chr6_1:5345964-5345983 None:intergenic 20.0%
!!! TTATGATCTTTTATCTCAAA+AGG + chr6_1:5346049-5346068 None:intergenic 20.0%
!!! TTGGAATGTGATTTTAAATT+AGG + chr6_1:5346072-5346091 None:intergenic 20.0%
! TATCGTGTGTTATATTAAGT+CGG - chr6_1:5344916-5344935 Msa0870740:CDS 25.0%
!!! TTATACTTGAACTTGTTTTC+AGG - chr6_1:5345000-5345019 Msa0870740:CDS 25.0%
!!! TATACTTGAACTTGTTTTCA+GGG - chr6_1:5345001-5345020 Msa0870740:CDS 25.0%
! ATGACATGAATCTCAAATTT+AGG - chr6_1:5346018-5346037 Msa0870740:intron 25.0%
! ACAATGATGTCAAGAATTAT+TGG - chr6_1:5346163-5346182 Msa0870740:intron 25.0%
! AAGAAAGAAGCTTATGAAAA+TGG - chr6_1:5346197-5346216 Msa0870740:intron 25.0%
! AGAAAGAAGCTTATGAAAAT+GGG - chr6_1:5346198-5346217 Msa0870740:intron 25.0%
!!! CTTTTGTTTGATCCAAAATT+AGG + chr6_1:5346314-5346333 None:intergenic 25.0%
! TCCAATAATTTCAATAGTGA+TGG - chr6_1:5346660-5346679 Msa0870740:intron 25.0%
! TCCATCACTATTGAAATTAT+TGG + chr6_1:5346664-5346683 None:intergenic 25.0%
! TATCGTGTGTTATATTAAGT+CGG - chr6_1:5344916-5344935 Msa0870740:CDS 25.0%
!!! TTATACTTGAACTTGTTTTC+AGG - chr6_1:5345000-5345019 Msa0870740:CDS 25.0%
!!! TATACTTGAACTTGTTTTCA+GGG - chr6_1:5345001-5345020 Msa0870740:CDS 25.0%
! ATGACATGAATCTCAAATTT+AGG - chr6_1:5346018-5346037 Msa0870740:intron 25.0%
! ACAATGATGTCAAGAATTAT+TGG - chr6_1:5346163-5346182 Msa0870740:intron 25.0%
! AAGAAAGAAGCTTATGAAAA+TGG - chr6_1:5346197-5346216 Msa0870740:intron 25.0%
! AGAAAGAAGCTTATGAAAAT+GGG - chr6_1:5346198-5346217 Msa0870740:intron 25.0%
!!! CTTTTGTTTGATCCAAAATT+AGG + chr6_1:5346314-5346333 None:intergenic 25.0%
! TCCAATAATTTCAATAGTGA+TGG - chr6_1:5346660-5346679 Msa0870740:intron 25.0%
! TCCATCACTATTGAAATTAT+TGG + chr6_1:5346664-5346683 None:intergenic 25.0%
!! ACATTAGTCTTATCACAACA+AGG + chr6_1:5344604-5344623 None:intergenic 30.0%
GATAAGACTAATGTGAAAAG+AGG - chr6_1:5344610-5344629 Msa0870740:CDS 30.0%
CTAATGTGAAAAGAGGTTTA+TGG - chr6_1:5344617-5344636 Msa0870740:CDS 30.0%
AAAACCATGTTCGTGAATAA+AGG + chr6_1:5344740-5344759 None:intergenic 30.0%
AGACTATAGAATCAGTGTAA+TGG - chr6_1:5345225-5345244 Msa0870740:CDS 30.0%
TGAAGAAGCAAATATGTACA+TGG + chr6_1:5345391-5345410 None:intergenic 30.0%
AGTTCGGTCTTAAATATAAG+AGG + chr6_1:5345739-5345758 None:intergenic 30.0%
TCAAAAGTGAATAAATCGTG+AGG - chr6_1:5345825-5345844 Msa0870740:intron 30.0%
TCCTAAAATAAGAGTTCGTT+TGG - chr6_1:5345925-5345944 Msa0870740:intron 30.0%
!!! TTTTACTTAGTGTTGGCTTA+AGG + chr6_1:5345957-5345976 None:intergenic 30.0%
! CTCTCAAAACAACCTAATTT+TGG - chr6_1:5346299-5346318 Msa0870740:intron 30.0%
TGGTGATATTGAATTTGATG+AGG + chr6_1:5346360-5346379 None:intergenic 30.0%
!! AATTCTCTTGGTTTGTGAAT+TGG + chr6_1:5346380-5346399 None:intergenic 30.0%
TGTATGTCACATTGTTGAAT+CGG + chr6_1:5346585-5346604 None:intergenic 30.0%
TTCAACAATGTGACATACAA+AGG - chr6_1:5346586-5346605 Msa0870740:intron 30.0%
TCAACAATGTGACATACAAA+GGG - chr6_1:5346587-5346606 Msa0870740:intron 30.0%
! CATTTTGCATTATACCTGAA+AGG + chr6_1:5346629-5346648 None:intergenic 30.0%
TCAGGTATAATGCAAAATGA+AGG - chr6_1:5346630-5346649 Msa0870740:intron 30.0%
! AGTGATGGAAATGATAAACA+AGG - chr6_1:5346675-5346694 Msa0870740:intron 30.0%
ATCAACTTGATATTCTTTGC+TGG + chr6_1:5346739-5346758 None:intergenic 30.0%
! TGTGAAGGAAATTCATTTTC+AGG - chr6_1:5346765-5346784 Msa0870740:CDS 30.0%
! GTGAAGGAAATTCATTTTCA+GGG - chr6_1:5346766-5346785 Msa0870740:CDS 30.0%
!! ATTTTCAGGGAATTCATTTG+TGG - chr6_1:5346779-5346798 Msa0870740:CDS 30.0%
! TTCATTTGTGGATGGTATTT+TGG - chr6_1:5346791-5346810 Msa0870740:CDS 30.0%
!! AAAGAAGCATCCAAAATTTC+TGG + chr6_1:5346846-5346865 None:intergenic 30.0%
!! ACATTAGTCTTATCACAACA+AGG + chr6_1:5344604-5344623 None:intergenic 30.0%
GATAAGACTAATGTGAAAAG+AGG - chr6_1:5344610-5344629 Msa0870740:CDS 30.0%
CTAATGTGAAAAGAGGTTTA+TGG - chr6_1:5344617-5344636 Msa0870740:CDS 30.0%
AAAACCATGTTCGTGAATAA+AGG + chr6_1:5344740-5344759 None:intergenic 30.0%
AGACTATAGAATCAGTGTAA+TGG - chr6_1:5345225-5345244 Msa0870740:CDS 30.0%
TGAAGAAGCAAATATGTACA+TGG + chr6_1:5345391-5345410 None:intergenic 30.0%
AGTTCGGTCTTAAATATAAG+AGG + chr6_1:5345739-5345758 None:intergenic 30.0%
TCAAAAGTGAATAAATCGTG+AGG - chr6_1:5345825-5345844 Msa0870740:intron 30.0%
TCCTAAAATAAGAGTTCGTT+TGG - chr6_1:5345925-5345944 Msa0870740:intron 30.0%
!!! TTTTACTTAGTGTTGGCTTA+AGG + chr6_1:5345957-5345976 None:intergenic 30.0%
! CTCTCAAAACAACCTAATTT+TGG - chr6_1:5346299-5346318 Msa0870740:intron 30.0%
TGGTGATATTGAATTTGATG+AGG + chr6_1:5346360-5346379 None:intergenic 30.0%
!! AATTCTCTTGGTTTGTGAAT+TGG + chr6_1:5346380-5346399 None:intergenic 30.0%
TGTATGTCACATTGTTGAAT+CGG + chr6_1:5346585-5346604 None:intergenic 30.0%
TTCAACAATGTGACATACAA+AGG - chr6_1:5346586-5346605 Msa0870740:intron 30.0%
TCAACAATGTGACATACAAA+GGG - chr6_1:5346587-5346606 Msa0870740:intron 30.0%
! CATTTTGCATTATACCTGAA+AGG + chr6_1:5346629-5346648 None:intergenic 30.0%
TCAGGTATAATGCAAAATGA+AGG - chr6_1:5346630-5346649 Msa0870740:intron 30.0%
! AGTGATGGAAATGATAAACA+AGG - chr6_1:5346675-5346694 Msa0870740:intron 30.0%
ATCAACTTGATATTCTTTGC+TGG + chr6_1:5346739-5346758 None:intergenic 30.0%
! TGTGAAGGAAATTCATTTTC+AGG - chr6_1:5346765-5346784 Msa0870740:CDS 30.0%
! GTGAAGGAAATTCATTTTCA+GGG - chr6_1:5346766-5346785 Msa0870740:CDS 30.0%
!! ATTTTCAGGGAATTCATTTG+TGG - chr6_1:5346779-5346798 Msa0870740:CDS 30.0%
! TTCATTTGTGGATGGTATTT+TGG - chr6_1:5346791-5346810 Msa0870740:CDS 30.0%
!! AAAGAAGCATCCAAAATTTC+TGG + chr6_1:5346846-5346865 None:intergenic 30.0%
!! TTAGTCTTATCACAACAAGG+AGG + chr6_1:5344601-5344620 None:intergenic 35.0%
!!! AGTATTTTAGCATCTTCCTC+AGG + chr6_1:5344646-5344665 None:intergenic 35.0%
TATGTAGCCAATCATGGAAT+TGG - chr6_1:5344670-5344689 Msa0870740:CDS 35.0%
CCAATTTCCAATTCCATGAT+TGG + chr6_1:5344680-5344699 None:intergenic 35.0%
CCAATCATGGAATTGGAAAT+TGG - chr6_1:5344677-5344696 Msa0870740:CDS 35.0%
AGGAAAAAACCTGCTTTCTT+TGG + chr6_1:5344712-5344731 None:intergenic 35.0%
GATTCCTTTATTCACGAACA+TGG - chr6_1:5344733-5344752 Msa0870740:CDS 35.0%
TATCACATTCACAACCACAT+TGG + chr6_1:5344788-5344807 None:intergenic 35.0%
ATATATTGAGGCCACATTTG+CGG - chr6_1:5344831-5344850 Msa0870740:CDS 35.0%
!! ACTTGTTTTCAGGGTTGAAT+AGG - chr6_1:5345010-5345029 Msa0870740:CDS 35.0%
AAACTATCATGCTTGAGATC+AGG + chr6_1:5345078-5345097 None:intergenic 35.0%
! ACTTTTGTACTGTGAACAGA+TGG + chr6_1:5345449-5345468 None:intergenic 35.0%
AAGACTACTAGCTACTAGTT+CGG + chr6_1:5345755-5345774 None:intergenic 35.0%
CTTTAGATCTTCGTCAACTT+TGG + chr6_1:5345793-5345812 None:intergenic 35.0%
! GTTGACGAAGATCTAAAGTT+AGG - chr6_1:5345795-5345814 Msa0870740:intron 35.0%
!!! GCCAAACGAACTCTTATTTT+AGG + chr6_1:5345929-5345948 None:intergenic 35.0%
!! TTAGTGTTGGCTTAAGGATA+AGG + chr6_1:5345951-5345970 None:intergenic 35.0%
TGTATTGCAAAAAGACTACC+TGG - chr6_1:5346132-5346151 Msa0870740:intron 35.0%
TCAGAAATCACTTGTGAAAC+TGG + chr6_1:5346246-5346265 None:intergenic 35.0%
TCACAAGTGATTTCTGACTT+AGG - chr6_1:5346249-5346268 Msa0870740:intron 35.0%
TGAATTTGATGAGGTTGCAA+TGG + chr6_1:5346351-5346370 None:intergenic 35.0%
CATGTTGTTGGAAATTCTCT+TGG + chr6_1:5346392-5346411 None:intergenic 35.0%
CTTCACTTAAGACATGTTGT+TGG + chr6_1:5346404-5346423 None:intergenic 35.0%
TTGTTGAATCGGTTGAATCT+CGG + chr6_1:5346574-5346593 None:intergenic 35.0%
GATGGAAATGATAAACAAGG+TGG - chr6_1:5346678-5346697 Msa0870740:intron 35.0%
!! CAAGTTGATAAGAAGTGTGA+AGG - chr6_1:5346750-5346769 Msa0870740:CDS 35.0%
! GGCAACATTTCCAGAAATTT+TGG - chr6_1:5346833-5346852 Msa0870740:CDS 35.0%
!! TTAGTCTTATCACAACAAGG+AGG + chr6_1:5344601-5344620 None:intergenic 35.0%
!!! AGTATTTTAGCATCTTCCTC+AGG + chr6_1:5344646-5344665 None:intergenic 35.0%
TATGTAGCCAATCATGGAAT+TGG - chr6_1:5344670-5344689 Msa0870740:CDS 35.0%
CCAATTTCCAATTCCATGAT+TGG + chr6_1:5344680-5344699 None:intergenic 35.0%
CCAATCATGGAATTGGAAAT+TGG - chr6_1:5344677-5344696 Msa0870740:CDS 35.0%
AGGAAAAAACCTGCTTTCTT+TGG + chr6_1:5344712-5344731 None:intergenic 35.0%
GATTCCTTTATTCACGAACA+TGG - chr6_1:5344733-5344752 Msa0870740:CDS 35.0%
TATCACATTCACAACCACAT+TGG + chr6_1:5344788-5344807 None:intergenic 35.0%
ATATATTGAGGCCACATTTG+CGG - chr6_1:5344831-5344850 Msa0870740:CDS 35.0%
!! ACTTGTTTTCAGGGTTGAAT+AGG - chr6_1:5345010-5345029 Msa0870740:CDS 35.0%
AAACTATCATGCTTGAGATC+AGG + chr6_1:5345078-5345097 None:intergenic 35.0%
! ACTTTTGTACTGTGAACAGA+TGG + chr6_1:5345449-5345468 None:intergenic 35.0%
AAGACTACTAGCTACTAGTT+CGG + chr6_1:5345755-5345774 None:intergenic 35.0%
CTTTAGATCTTCGTCAACTT+TGG + chr6_1:5345793-5345812 None:intergenic 35.0%
! GTTGACGAAGATCTAAAGTT+AGG - chr6_1:5345795-5345814 Msa0870740:intron 35.0%
!!! GCCAAACGAACTCTTATTTT+AGG + chr6_1:5345929-5345948 None:intergenic 35.0%
!! TTAGTGTTGGCTTAAGGATA+AGG + chr6_1:5345951-5345970 None:intergenic 35.0%
TGTATTGCAAAAAGACTACC+TGG - chr6_1:5346132-5346151 Msa0870740:intron 35.0%
TCAGAAATCACTTGTGAAAC+TGG + chr6_1:5346246-5346265 None:intergenic 35.0%
TCACAAGTGATTTCTGACTT+AGG - chr6_1:5346249-5346268 Msa0870740:intron 35.0%
TGAATTTGATGAGGTTGCAA+TGG + chr6_1:5346351-5346370 None:intergenic 35.0%
CATGTTGTTGGAAATTCTCT+TGG + chr6_1:5346392-5346411 None:intergenic 35.0%
CTTCACTTAAGACATGTTGT+TGG + chr6_1:5346404-5346423 None:intergenic 35.0%
TTGTTGAATCGGTTGAATCT+CGG + chr6_1:5346574-5346593 None:intergenic 35.0%
GATGGAAATGATAAACAAGG+TGG - chr6_1:5346678-5346697 Msa0870740:intron 35.0%
!! CAAGTTGATAAGAAGTGTGA+AGG - chr6_1:5346750-5346769 Msa0870740:CDS 35.0%
! GGCAACATTTCCAGAAATTT+TGG - chr6_1:5346833-5346852 Msa0870740:CDS 35.0%
CTTGCTTATGTAGCCAATCA+TGG - chr6_1:5344664-5344683 Msa0870740:CDS 40.0%
GTTCGTGAATAAAGGAATCG+AGG + chr6_1:5344732-5344751 None:intergenic 40.0%
TATTAAGTCGGTCTTTGAGC+CGG - chr6_1:5344928-5344947 Msa0870740:CDS 40.0%
!! TTTTCAGGGTTGAATAGGTG+TGG - chr6_1:5345015-5345034 Msa0870740:CDS 40.0%
!! GCATGATAGTTTTACACCTG+AGG - chr6_1:5345086-5345105 Msa0870740:CDS 40.0%
ATAATCAGCTCTTCTTCCTC+AGG + chr6_1:5345105-5345124 None:intergenic 40.0%
GAGCTGATTATTACCCTTCA+TGG - chr6_1:5345114-5345133 Msa0870740:CDS 40.0%
ATTACCCTTCATGGAGCTAT+AGG - chr6_1:5345123-5345142 Msa0870740:CDS 40.0%
GAACTAGTAGCTAGTAGTCT+TGG - chr6_1:5345754-5345773 Msa0870740:intron 40.0%
! CGAAGATCTAAAGTTAGGTG+AGG - chr6_1:5345800-5345819 Msa0870740:intron 40.0%
AACGATAAGAGCGACTAAGT+AGG - chr6_1:5345891-5345910 Msa0870740:intron 40.0%
ACGATAAGAGCGACTAAGTA+GGG - chr6_1:5345892-5345911 Msa0870740:intron 40.0%
ACATCATTGTCTGTTCTTCC+AGG + chr6_1:5346153-5346172 None:intergenic 40.0%
! GAAACTGGCTTATGAGTTAC+TGG + chr6_1:5346231-5346250 None:intergenic 40.0%
TTTGAGAGTTTGTGCTTGTG+AGG + chr6_1:5346287-5346306 None:intergenic 40.0%
CATCTTCCTCTAATCTCACT+AGG - chr6_1:5346445-5346464 Msa0870740:intron 40.0%
GCTTAACCTAGTGAGATTAG+AGG + chr6_1:5346454-5346473 None:intergenic 40.0%
! GTGTTGCAAGAGTACGAAAT+CGG + chr6_1:5346480-5346499 None:intergenic 40.0%
ACAATGATGAGCCTTTAGTG+TGG - chr6_1:5346547-5346566 Msa0870740:intron 40.0%
ATGTCATCATTGAGCCTTTC+AGG - chr6_1:5346612-5346631 Msa0870740:intron 40.0%
AAACAAGGTGGTTCAAGTGA+AGG - chr6_1:5346690-5346709 Msa0870740:intron 40.0%
! TGGTTCAAGTGAAGGTTTTG+AGG - chr6_1:5346698-5346717 Msa0870740:intron 40.0%
TCAGGGAATTCATTTGTGGA+TGG - chr6_1:5346783-5346802 Msa0870740:CDS 40.0%
!! TGTGGATGGTATTTTGGACA+AGG - chr6_1:5346797-5346816 Msa0870740:CDS 40.0%
CTTGCTTATGTAGCCAATCA+TGG - chr6_1:5344664-5344683 Msa0870740:CDS 40.0%
GTTCGTGAATAAAGGAATCG+AGG + chr6_1:5344732-5344751 None:intergenic 40.0%
TATTAAGTCGGTCTTTGAGC+CGG - chr6_1:5344928-5344947 Msa0870740:CDS 40.0%
!! TTTTCAGGGTTGAATAGGTG+TGG - chr6_1:5345015-5345034 Msa0870740:CDS 40.0%
!! GCATGATAGTTTTACACCTG+AGG - chr6_1:5345086-5345105 Msa0870740:CDS 40.0%
ATAATCAGCTCTTCTTCCTC+AGG + chr6_1:5345105-5345124 None:intergenic 40.0%
GAGCTGATTATTACCCTTCA+TGG - chr6_1:5345114-5345133 Msa0870740:CDS 40.0%
ATTACCCTTCATGGAGCTAT+AGG - chr6_1:5345123-5345142 Msa0870740:CDS 40.0%
GAACTAGTAGCTAGTAGTCT+TGG - chr6_1:5345754-5345773 Msa0870740:intron 40.0%
! CGAAGATCTAAAGTTAGGTG+AGG - chr6_1:5345800-5345819 Msa0870740:intron 40.0%
AACGATAAGAGCGACTAAGT+AGG - chr6_1:5345891-5345910 Msa0870740:intron 40.0%
ACGATAAGAGCGACTAAGTA+GGG - chr6_1:5345892-5345911 Msa0870740:intron 40.0%
ACATCATTGTCTGTTCTTCC+AGG + chr6_1:5346153-5346172 None:intergenic 40.0%
! GAAACTGGCTTATGAGTTAC+TGG + chr6_1:5346231-5346250 None:intergenic 40.0%
TTTGAGAGTTTGTGCTTGTG+AGG + chr6_1:5346287-5346306 None:intergenic 40.0%
CATCTTCCTCTAATCTCACT+AGG - chr6_1:5346445-5346464 Msa0870740:intron 40.0%
GCTTAACCTAGTGAGATTAG+AGG + chr6_1:5346454-5346473 None:intergenic 40.0%
! GTGTTGCAAGAGTACGAAAT+CGG + chr6_1:5346480-5346499 None:intergenic 40.0%
ACAATGATGAGCCTTTAGTG+TGG - chr6_1:5346547-5346566 Msa0870740:intron 40.0%
ATGTCATCATTGAGCCTTTC+AGG - chr6_1:5346612-5346631 Msa0870740:intron 40.0%
AAACAAGGTGGTTCAAGTGA+AGG - chr6_1:5346690-5346709 Msa0870740:intron 40.0%
! TGGTTCAAGTGAAGGTTTTG+AGG - chr6_1:5346698-5346717 Msa0870740:intron 40.0%
TCAGGGAATTCATTTGTGGA+TGG - chr6_1:5346783-5346802 Msa0870740:CDS 40.0%
!! TGTGGATGGTATTTTGGACA+AGG - chr6_1:5346797-5346816 Msa0870740:CDS 40.0%
AAGAGGTTTATGGACTCCTG+AGG - chr6_1:5344627-5344646 Msa0870740:CDS 45.0%
ACAGCTGTTCCAAAGAAAGC+AGG - chr6_1:5344700-5344719 Msa0870740:CDS 45.0%
GCAGTATAATGCGACCAATG+TGG - chr6_1:5344771-5344790 Msa0870740:CDS 45.0%
ATAGGTGTGGTAAGAGTTGC+AGG - chr6_1:5345028-5345047 Msa0870740:CDS 45.0%
GCTTCCTATAGCTCCATGAA+GGG + chr6_1:5345130-5345149 None:intergenic 45.0%
TGCTTCCTATAGCTCCATGA+AGG + chr6_1:5345131-5345150 None:intergenic 45.0%
TTCATGGAGCTATAGGAAGC+AGG - chr6_1:5345130-5345149 Msa0870740:CDS 45.0%
ATAAGAGCGACTAAGTAGGG+CGG - chr6_1:5345895-5345914 Msa0870740:intron 45.0%
TGAATCTCGGTCCACACTAA+AGG + chr6_1:5346561-5346580 None:intergenic 45.0%
TGGACAAGGACAGTGAGATT+AGG - chr6_1:5346811-5346830 Msa0870740:CDS 45.0%
GGACAAGGACAGTGAGATTA+GGG - chr6_1:5346812-5346831 Msa0870740:CDS 45.0%
AAGAGGTTTATGGACTCCTG+AGG - chr6_1:5344627-5344646 Msa0870740:CDS 45.0%
ACAGCTGTTCCAAAGAAAGC+AGG - chr6_1:5344700-5344719 Msa0870740:CDS 45.0%
GCAGTATAATGCGACCAATG+TGG - chr6_1:5344771-5344790 Msa0870740:CDS 45.0%
ATAGGTGTGGTAAGAGTTGC+AGG - chr6_1:5345028-5345047 Msa0870740:CDS 45.0%
GCTTCCTATAGCTCCATGAA+GGG + chr6_1:5345130-5345149 None:intergenic 45.0%
TGCTTCCTATAGCTCCATGA+AGG + chr6_1:5345131-5345150 None:intergenic 45.0%
TTCATGGAGCTATAGGAAGC+AGG - chr6_1:5345130-5345149 Msa0870740:CDS 45.0%
ATAAGAGCGACTAAGTAGGG+CGG - chr6_1:5345895-5345914 Msa0870740:intron 45.0%
TGAATCTCGGTCCACACTAA+AGG + chr6_1:5346561-5346580 None:intergenic 45.0%
TGGACAAGGACAGTGAGATT+AGG - chr6_1:5346811-5346830 Msa0870740:CDS 45.0%
GGACAAGGACAGTGAGATTA+GGG - chr6_1:5346812-5346831 Msa0870740:CDS 45.0%
TAAGAGCGACTAAGTAGGGC+GGG - chr6_1:5345896-5345915 Msa0870740:intron 50.0%
TAAGAGCGACTAAGTAGGGC+GGG - chr6_1:5345896-5345915 Msa0870740:intron 50.0%
GCAGTCTGCAACCGCAAATG+TGG + chr6_1:5344845-5344864 None:intergenic 55.0%
GCAGTCTGCAACCGCAAATG+TGG + chr6_1:5344845-5344864 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 5344589 5346875 5344589 ID=Msa0870740;Name=Msa0870740
chr6_1 mRNA 5344589 5346875 5344589 ID=Msa0870740-mRNA-1;Parent=Msa0870740;Name=Msa0870740-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|337
chr6_1 exon 5346743 5346875 5346743 ID=Msa0870740-mRNA-1:exon:1724;Parent=Msa0870740-mRNA-1
chr6_1 exon 5346313 5346442 5346313 ID=Msa0870740-mRNA-1:exon:1723;Parent=Msa0870740-mRNA-1
chr6_1 exon 5344589 5345339 5344589 ID=Msa0870740-mRNA-1:exon:1722;Parent=Msa0870740-mRNA-1
chr6_1 CDS 5346743 5346875 5346743 ID=Msa0870740-mRNA-1:cds;Parent=Msa0870740-mRNA-1
chr6_1 CDS 5346313 5346442 5346313 ID=Msa0870740-mRNA-1:cds;Parent=Msa0870740-mRNA-1
chr6_1 CDS 5344589 5345339 5344589 ID=Msa0870740-mRNA-1:cds;Parent=Msa0870740-mRNA-1
Gene Sequence

>Msa0870740

ATGGGAAGGCCTCCTTGTTGTGATAAGACTAATGTGAAAAGAGGTTTATGGACTCCTGAGGAAGATGCTAAAATACTTGCTTATGTAGCCAATCATGGAATTGGAAATTGGACAGCTGTTCCAAAGAAAGCAGGGTTGAATAGGTGTGGTAAGAGTTGCAGGCTAAGATATACAAATTATCTAAGACCTGATCTCAAGCATGATAGTTTTACACCTGAGGAAGAAGAGCTGATTATTACCCTTCATGGAGCTATAGGAAGCAGATGGTCTTGTATTGCAAAAAGACTACCTGGAAGAACAGACAATGATGTCAAGAATTATTGGAACACAAAACTAAGAAAGAAGCTTATGAAAATGGGAATTGATCCAGTAACTCATAAGCCAGTTTCACAAGTGATTTCTGACTTAGGAAACATTAGTAGCCTCACAAGCACAAACTCTCAAAACAACCTAATTTTGGATCAAACAAAAGATGAACAAGTTCAACCATTGCAACCTCATCAAATTCAATATCACCAATTCACAAACCAAGAGAATTTCCAACAACATGTCTTAAGTGAAGTTGCATCATCAAGTTCATCTTCATCTTCCTCTAATCTCACTAGGTTAAGCTCGCCGATTTCGTACTCTTGCAACACTTCACAAGCTCAAATTAATTCTAACTTTGATTGGAGTGATTTTCTTCACAATGATGAGCCTTTAGTGTGGACCGAGATTCAACCGATTCAACAATGTGACATACAAAGGGTAATGTCATCATTGAGCCTTTCAGGTATAATGCAAAATGAAGGTGAAATTTCCAATAATTTCAATAGTGATGGAAATGATAAACAAGGTGGTTCAAGTGAAGGTTTTGAGGATGTTGCTTGTGTTGCCAGCAAAGAATATCAAGTTGATAAGAAGTGTGAAGGAAATTCATTTTCAGGGAATTCATTTGTGGATGGTATTTTGGACAAGGACAGTGAGATTAGGGCAACATTTCCAGAAATTTTGGATGCTTCTTTTGATTATTGA
Protein sequence

>Msa0870740

MGRPPCCDKTNVKRGLWTPEEDAKILAYVANHGIGNWTAVPKKAGLNRCGKSCRLRYTNYLRPDLKHDSFTPEEEELIITLHGAIGSRWSCIAKRLPGRTDNDVKNYWNTKLRKKLMKMGIDPVTHKPVSQVISDLGNISSLTSTNSQNNLILDQTKDEQVQPLQPHQIQYHQFTNQENFQQHVLSEVASSSSSSSSSNLTRLSSPISYSCNTSQAQINSNFDWSDFLHNDEPLVWTEIQPIQQCDIQRVMSSLSLSGIMQNEGEISNNFNSDGNDKQGGSSEGFEDVACVASKEYQVDKKCEGNSFSGNSFVDGILDKDSEIRATFPEILDASFDY*