Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0871160 | KEH24949.1 | 53.360 | 253 | 60 | 4 | 1 | 237 | 45 | 255 | 2.05e-62 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0871160 | A0A072U5D2 | 53.360 | 253 | 60 | 4 | 1 | 237 | 45 | 255 | 9.79e-63 | 211 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0871160 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0871160 | MtrunA17_Chr1g0172961 | 54.412 | 136 | 20 | 1 | 124 | 217 | 80 | 215 | 8.79e-37 | 130 |
| Msa0871160 | MtrunA17_Chr4g0037041 | 68.852 | 61 | 19 | 0 | 111 | 171 | 57 | 117 | 3.41e-20 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 62 sgRNAs with CRISPR-Local
Find 463 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTTGTGCGCGAAATTTA+TGG | 0.158499 | 6_1:-6067054 | Msa0871160:CDS |
| ATTGAGAGGCATAATGTTCT+TGG | 0.300488 | 6_1:-6067136 | Msa0871160:intron |
| GTTCCTGTGAAGGTGGATTC+TGG | 0.308857 | 6_1:-6065255 | Msa0871160:CDS |
| TGGCATTTGCACCAGGGTCC+AGG | 0.322640 | 6_1:+6067003 | None:intergenic |
| CTATGAGAAGAATGAATATA+TGG | 0.357697 | 6_1:-6067437 | Msa0871160:exon |
| CCGTCAAACTGAAGCGGGCC+TGG | 0.378965 | 6_1:+6067027 | None:intergenic |
| AGCAGGCTGTTTCATGGGAT+TGG | 0.388672 | 6_1:-6065299 | Msa0871160:intron |
| AGTCGAAGCAGAATCGGTTC+TGG | 0.395435 | 6_1:+6067458 | None:intergenic |
| TATAATATTGCACCATGAAA+AGG | 0.397705 | 6_1:-6066255 | Msa0871160:CDS |
| ACTTGTTTGCAGATTCTTCA+AGG | 0.402027 | 6_1:+6067407 | None:intergenic |
| TTATCTAGCAGGCTGTTTCA+TGG | 0.425391 | 6_1:-6065305 | Msa0871160:intron |
| AGAACAAAACATATTGTCAT+TGG | 0.430870 | 6_1:+6067361 | None:intergenic |
| CCTCTCAATGTAATAGTAGT+TGG | 0.435259 | 6_1:+6067150 | None:intergenic |
| AGTTTGACGGCCCTGGACCC+TGG | 0.442359 | 6_1:-6067014 | Msa0871160:CDS |
| TACAGAAGTACTGTTATAAG+AGG | 0.443086 | 6_1:-6067490 | Msa0871160:five_prime_UTR |
| CCAGGCCCGCTTCAGTTTGA+CGG | 0.444861 | 6_1:-6067027 | Msa0871160:CDS |
| TTTCCGACTGATGTTAATCC+GGG | 0.452607 | 6_1:+6067186 | None:intergenic |
| ATAGTAGTTGGATGAAAAGC+TGG | 0.456199 | 6_1:+6067162 | None:intergenic |
| CCGCTTCAGTTTGACGGCCC+TGG | 0.456706 | 6_1:-6067021 | Msa0871160:CDS |
| ACAAGCTTGGCATTTGCACC+AGG | 0.460421 | 6_1:+6066996 | None:intergenic |
| TCTGCAAACAAGTGGAAACT+TGG | 0.468927 | 6_1:-6067397 | Msa0871160:CDS |
| TCAATCTCCAACCACATCCT+TGG | 0.474432 | 6_1:-6066219 | Msa0871160:CDS |
| TTTAAATTGCTCCAAGGATG+TGG | 0.474580 | 6_1:+6066208 | None:intergenic |
| TATCTAGCAGGCTGTTTCAT+GGG | 0.476646 | 6_1:-6065304 | Msa0871160:intron |
| GGTTGGAGATTGAATACTCT+TGG | 0.478368 | 6_1:+6066229 | None:intergenic |
| CGCGAAATTTATGGAAATCC+AGG | 0.478693 | 6_1:-6067045 | Msa0871160:CDS |
| GTATAACCAACCACTGCATT+GGG | 0.484035 | 6_1:+6067327 | None:intergenic |
| AGTATAACCAACCACTGCAT+TGG | 0.491069 | 6_1:+6067326 | None:intergenic |
| GGCATTTGCACCAGGGTCCA+GGG | 0.497704 | 6_1:+6067004 | None:intergenic |
| ATAATATTGCACCATGAAAA+GGG | 0.510941 | 6_1:-6066254 | Msa0871160:CDS |
| TTGAAATTTAAATTGCTCCA+AGG | 0.521272 | 6_1:+6066202 | None:intergenic |
| AATTGCTCCAAGGATGTGGT+TGG | 0.521764 | 6_1:+6066212 | None:intergenic |
| CTATAATGACGGTGAAGCAT+TGG | 0.521766 | 6_1:-6067218 | Msa0871160:CDS |
| TGTCCAGAATCCACCTTCAC+AGG | 0.524165 | 6_1:+6065252 | None:intergenic |
| CAGGGCCGTCAAACTGAAGC+GGG | 0.525172 | 6_1:+6067022 | None:intergenic |
| TTTCATCCCAATGCAGTGGT+TGG | 0.527745 | 6_1:-6067333 | Msa0871160:CDS |
| AAACATATTGTCATTGGAGC+AGG | 0.529642 | 6_1:+6067367 | None:intergenic |
| AACTTGATCAGTAAGTAAGC+TGG | 0.539255 | 6_1:+6065275 | None:intergenic |
| TCTCATAGTCGAAGCAGAAT+CGG | 0.539384 | 6_1:+6067452 | None:intergenic |
| TTGCTTTCATCCCAATGCAG+TGG | 0.544308 | 6_1:-6067337 | Msa0871160:CDS |
| CATGGTGCAATATTATATGT+CGG | 0.548944 | 6_1:+6066261 | None:intergenic |
| GTTGAATGTTTGATAAGCAT+AGG | 0.552088 | 6_1:+6059374 | None:intergenic |
| AACAGAAAGAGTTACAAGCT+TGG | 0.554231 | 6_1:+6066983 | None:intergenic |
| CCAACTACTATTACATTGAG+AGG | 0.554865 | 6_1:-6067150 | Msa0871160:CDS |
| GAAAGCTAGTCGCATTTCTA+CGG | 0.557940 | 6_1:+6067073 | None:intergenic |
| TTGAAGAATCTGCAAACAAG+TGG | 0.561015 | 6_1:-6067405 | Msa0871160:CDS |
| AAGCATTGGTCTCTGAATCC+CGG | 0.562224 | 6_1:-6067204 | Msa0871160:CDS |
| GATATGTCTTGCGCTACTGT+CGG | 0.563627 | 6_1:-6066048 | Msa0871160:CDS |
| TGATCAAGTTCCTGTGAAGG+TGG | 0.573103 | 6_1:-6065262 | Msa0871160:CDS |
| TGGTGAAACATCGGCGACCA+AGG | 0.587620 | 6_1:-6065938 | Msa0871160:intron |
| TAGTTGTCCTGTTTGCAACA+AGG | 0.599547 | 6_1:-6066309 | Msa0871160:CDS |
| GAGAAACAAGTTAGTGACAT+TGG | 0.605999 | 6_1:-6065958 | Msa0871160:CDS |
| CCAGGGCCGTCAAACTGAAG+CGG | 0.606100 | 6_1:+6067021 | None:intergenic |
| TACTGATCAAGTTCCTGTGA+AGG | 0.615023 | 6_1:-6065265 | Msa0871160:CDS |
| GCTCAAAGCATCAACCATTG+TGG | 0.616700 | 6_1:-6065995 | Msa0871160:CDS |
| CAAGCTTGGCATTTGCACCA+GGG | 0.631197 | 6_1:+6066997 | None:intergenic |
| ACTGTCGGTGGTGATGATCA+TGG | 0.634898 | 6_1:-6066033 | Msa0871160:CDS |
| ATGTCTTGCGCTACTGTCGG+TGG | 0.635793 | 6_1:-6066045 | Msa0871160:CDS |
| AATCCCGGATTAACATCAGT+CGG | 0.645340 | 6_1:-6067189 | Msa0871160:CDS |
| TAGTGACATTGGTGAAACAT+CGG | 0.647580 | 6_1:-6065947 | Msa0871160:CDS |
| GATCTTGTCATTATCCACAA+TGG | 0.651959 | 6_1:+6065981 | None:intergenic |
| ACAGAAGTACTGTTATAAGA+GGG | 0.655159 | 6_1:-6067489 | Msa0871160:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATAATATATATATAT+AGG | - | chr6_1:6065695-6065714 | Msa0871160:intron | 0.0% |
| !! | TGAAATTTAAACAAAAAATT+GGG | - | chr6_1:6062948-6062967 | Msa0871160:intron | 10.0% |
| !!! | TTTAATAAATTAGATTTTGA+TGG | + | chr6_1:6063970-6063989 | None:intergenic | 10.0% |
| !!! | AAATTATTTGATTTTATTAG+GGG | + | chr6_1:6065173-6065192 | None:intergenic | 10.0% |
| !!! | ATTTTTATATGTATAATACA+TGG | - | chr6_1:6065666-6065685 | Msa0871160:intron | 10.0% |
| !! | ATATATTAGATTTATTATGA+TGG | - | chr6_1:6065730-6065749 | Msa0871160:intron | 10.0% |
| !!! | CATTAATTCTTTAAAAAAAA+TGG | - | chr6_1:6066617-6066636 | Msa0871160:intron | 10.0% |
| !! | TATTATAATAAATGTTGCAA+GGG | + | chr6_1:6060228-6060247 | None:intergenic | 15.0% |
| !! | ATATTATAATAAATGTTGCA+AGG | + | chr6_1:6060229-6060248 | None:intergenic | 15.0% |
| !!! | AAAACAAAAATATTTAGAGT+TGG | - | chr6_1:6061938-6061957 | Msa0871160:intron | 15.0% |
| !! | GCACAAATAAAAAATAAAAA+AGG | - | chr6_1:6062689-6062708 | Msa0871160:intron | 15.0% |
| !! | GTGAAATTTAAACAAAAAAT+TGG | - | chr6_1:6062947-6062966 | Msa0871160:intron | 15.0% |
| !! | GAAATTTAAACAAAAAATTG+GGG | - | chr6_1:6062949-6062968 | Msa0871160:intron | 15.0% |
| !!! | AAGATTTTAAAAGATTTTGT+AGG | - | chr6_1:6063368-6063387 | Msa0871160:intron | 15.0% |
| !!! | AAGATTTGAAAGAATTTTAA+AGG | - | chr6_1:6063462-6063481 | Msa0871160:intron | 15.0% |
| !!! | AAGAATTTTAAAGGATTTTA+TGG | - | chr6_1:6063471-6063490 | Msa0871160:intron | 15.0% |
| !! | GTATTCAAAATATTATGATA+GGG | + | chr6_1:6063565-6063584 | None:intergenic | 15.0% |
| !! | TGTATTCAAAATATTATGAT+AGG | + | chr6_1:6063566-6063585 | None:intergenic | 15.0% |
| !!! | GTATTATTTTCCAAATATAT+TGG | + | chr6_1:6064500-6064519 | None:intergenic | 15.0% |
| !!! | AAAATTTTGTTTTTATCGAA+AGG | - | chr6_1:6065051-6065070 | Msa0871160:intron | 15.0% |
| !!! | GAATATCTTATGAATATTTT+AGG | - | chr6_1:6065329-6065348 | Msa0871160:intron | 15.0% |
| !! | TTAGAGAATAATTATAATGT+TGG | - | chr6_1:6065409-6065428 | Msa0871160:intron | 15.0% |
| !!! | GATATTTTTTTCAAACTTAA+AGG | + | chr6_1:6065482-6065501 | None:intergenic | 15.0% |
| !! | TTGAAACTTAATAAATGTAA+AGG | + | chr6_1:6065513-6065532 | None:intergenic | 15.0% |
| !! | ACATTTATTAAGTTTCAAAT+AGG | - | chr6_1:6065515-6065534 | Msa0871160:intron | 15.0% |
| !! | ACAATATTCAATTTACATAT+TGG | - | chr6_1:6066423-6066442 | Msa0871160:intron | 15.0% |
| !! | ATGTGAAAAATAATAATTTG+AGG | - | chr6_1:6067202-6067221 | Msa0871160:CDS | 15.0% |
| !! | TGTGAAAAATAATAATTTGA+GGG | - | chr6_1:6067203-6067222 | Msa0871160:CDS | 15.0% |
| !!! | ATTTAGATTTGATTGTTTTT+TGG | - | chr6_1:6067287-6067306 | Msa0871160:CDS | 15.0% |
| !!! | TCCATTATTTTTTTTCTTTA+TGG | - | chr6_1:6067313-6067332 | Msa0871160:CDS | 15.0% |
| !! | ACCATAAAGAAAAAAAATAA+TGG | + | chr6_1:6067317-6067336 | None:intergenic | 15.0% |
| !!! | TTGAAATTGCAATGAATTTT+AGG | - | chr6_1:6059896-6059915 | Msa0871160:intron | 20.0% |
| !! | ATATCATTGAATGAATGAAA+AGG | + | chr6_1:6060639-6060658 | None:intergenic | 20.0% |
| !! | ATTATTATTAGTATTCACCT+TGG | + | chr6_1:6061219-6061238 | None:intergenic | 20.0% |
| !! | TTACATAATGTATTTACTTG+CGG | - | chr6_1:6061650-6061669 | Msa0871160:intron | 20.0% |
| !! | TTCAATTTAGTCAAAAAACT+CGG | + | chr6_1:6062323-6062342 | None:intergenic | 20.0% |
| !! | AAATGTCTTAAAAAGATCAA+TGG | + | chr6_1:6062346-6062365 | None:intergenic | 20.0% |
| !! | CTTAGTTTCAAAAATTTAAG+TGG | + | chr6_1:6062452-6062471 | None:intergenic | 20.0% |
| !!! | CACTTAAATTTTTGAAACTA+AGG | - | chr6_1:6062450-6062469 | Msa0871160:intron | 20.0% |
| !! | TTAGAGGAATATTATTAAGT+TGG | - | chr6_1:6062545-6062564 | Msa0871160:intron | 20.0% |
| !!! | ATATTATTAAGTTGGTTGTA+TGG | - | chr6_1:6062553-6062572 | Msa0871160:intron | 20.0% |
| !!! | TATTATTAAGTTGGTTGTAT+GGG | - | chr6_1:6062554-6062573 | Msa0871160:intron | 20.0% |
| !!! | ACGAAAAAAAAAGCTTTAAA+AGG | + | chr6_1:6062753-6062772 | None:intergenic | 20.0% |
| !!! | ATCTTTTTGTTGATATGAAA+TGG | - | chr6_1:6063211-6063230 | Msa0871160:intron | 20.0% |
| !!! | ATTTTCAATTTGGATTTCAA+TGG | - | chr6_1:6063428-6063447 | Msa0871160:intron | 20.0% |
| !!! | ATTAAACAATCCTTTGAAAT+TGG | - | chr6_1:6063984-6064003 | Msa0871160:intron | 20.0% |
| !!! | GCAATTTAAAAAAAGTTTTG+TGG | + | chr6_1:6064108-6064127 | None:intergenic | 20.0% |
| !! | TTAATTATGAAAAAGTCTTG+TGG | + | chr6_1:6064150-6064169 | None:intergenic | 20.0% |
| !! | TTCAAAAACAAGAACATTAA+GGG | + | chr6_1:6064215-6064234 | None:intergenic | 20.0% |
| !! | ATTCAAAAACAAGAACATTA+AGG | + | chr6_1:6064216-6064235 | None:intergenic | 20.0% |
| !!! | TTATTTTCCAAATATATTGG+TGG | + | chr6_1:6064497-6064516 | None:intergenic | 20.0% |
| !! | GTACTCTTTATAAGATATAT+TGG | + | chr6_1:6064612-6064631 | None:intergenic | 20.0% |
| !! | TTTCCACAAATTCATAATAA+AGG | - | chr6_1:6064871-6064890 | Msa0871160:intron | 20.0% |
| !! | ATAAAGAACAAACATGAATT+TGG | - | chr6_1:6064963-6064982 | Msa0871160:intron | 20.0% |
| !! | TAAAGAACAAACATGAATTT+GGG | - | chr6_1:6064964-6064983 | Msa0871160:intron | 20.0% |
| !! | TTTACTCTCATAGTAAAAAT+AGG | - | chr6_1:6065147-6065166 | Msa0871160:intron | 20.0% |
| !!! | ATTTTCCTTAGTTAATACAA+AGG | - | chr6_1:6065357-6065376 | Msa0871160:intron | 20.0% |
| !! | TTAATACAAAGGCAAAAAAA+AGG | - | chr6_1:6065368-6065387 | Msa0871160:intron | 20.0% |
| !!! | GAACTTTGTTATTTTATACA+CGG | - | chr6_1:6065438-6065457 | Msa0871160:intron | 20.0% |
| !! | TGGTAGAATTATATTATACA+AGG | - | chr6_1:6065971-6065990 | Msa0871160:CDS | 20.0% |
| !!! | TACTGCATTTTCATATATTA+AGG | - | chr6_1:6066112-6066131 | Msa0871160:intron | 20.0% |
| !! | AAAAAGTTAAACAAAGTTGA+TGG | - | chr6_1:6066176-6066195 | Msa0871160:intron | 20.0% |
| !! | TTTGTTTGTATTATATGTGT+TGG | + | chr6_1:6066755-6066774 | None:intergenic | 20.0% |
| !! | TTTATATAGTCAAAATTGAG+TGG | + | chr6_1:6066963-6066982 | None:intergenic | 20.0% |
| !! | TGTTGCAAAAAAATAAAATG+AGG | - | chr6_1:6067149-6067168 | Msa0871160:CDS | 20.0% |
| !! | TTCAAAATGCAAAAACAATA+GGG | - | chr6_1:6067175-6067194 | Msa0871160:CDS | 20.0% |
| !! | AAAAATAATAATTTGAGGGT+TGG | - | chr6_1:6067207-6067226 | Msa0871160:CDS | 20.0% |
| !!! | ATTTTTGCTTATATATGCAA+CGG | - | chr6_1:6067417-6067436 | Msa0871160:CDS | 20.0% |
| !! | TTCTATAATAACAAAGCAAA+AGG | - | chr6_1:6067666-6067685 | Msa0871160:intron | 20.0% |
| !! | TCTATAATAACAAAGCAAAA+GGG | - | chr6_1:6067667-6067686 | Msa0871160:intron | 20.0% |
| ! | TCATGACATAATTAGTTGTT+CGG | - | chr6_1:6059414-6059433 | Msa0871160:intron | 25.0% |
| !! | TGCAAGATTTTAAGCATATA+TGG | - | chr6_1:6059587-6059606 | Msa0871160:intron | 25.0% |
| ! | CTATGAGAAGAATGAATATA+TGG | - | chr6_1:6059700-6059719 | Msa0871160:intron | 25.0% |
| ! | AGAACAAAACATATTGTCAT+TGG | + | chr6_1:6059779-6059798 | None:intergenic | 25.0% |
| !! | TGAATTTTAGGCTATAATGA+CGG | - | chr6_1:6059908-6059927 | Msa0871160:intron | 25.0% |
| !! | TGCTATTACTCTAGAAATAA+CGG | - | chr6_1:6060531-6060550 | Msa0871160:intron | 25.0% |
| ! | AATGATATTGAGAAATCTCA+AGG | - | chr6_1:6060651-6060670 | Msa0871160:intron | 25.0% |
| !!! | CAAGGTTTTTTCATCTATTA+AGG | - | chr6_1:6060846-6060865 | Msa0871160:intron | 25.0% |
| ! | TATAATATTGCACCATGAAA+AGG | - | chr6_1:6060882-6060901 | Msa0871160:intron | 25.0% |
| ! | ATAATATTGCACCATGAAAA+GGG | - | chr6_1:6060883-6060902 | Msa0871160:intron | 25.0% |
| ! | TTGAAATTTAAATTGCTCCA+AGG | + | chr6_1:6060938-6060957 | None:intergenic | 25.0% |
| !! | GAGCAATTTAAATTTCAAGT+TGG | - | chr6_1:6060940-6060959 | Msa0871160:intron | 25.0% |
| ! | ATTGATCATGAACATCTTAA+TGG | - | chr6_1:6061050-6061069 | Msa0871160:intron | 25.0% |
| ! | AGATATATTATTGTGCTCAA+TGG | - | chr6_1:6061338-6061357 | Msa0871160:intron | 25.0% |
| !!! | ATCTTTTATGCTGTTTCATA+CGG | - | chr6_1:6061528-6061547 | Msa0871160:intron | 25.0% |
| ! | ATTATGTAGTGTCTTTGTAT+TGG | + | chr6_1:6061713-6061732 | None:intergenic | 25.0% |
| ! | AAGATATACCTAATTCTTTG+TGG | + | chr6_1:6061767-6061786 | None:intergenic | 25.0% |
| ! | TCTTTAGATGCAAAATGTTT+AGG | - | chr6_1:6061915-6061934 | Msa0871160:intron | 25.0% |
| !! | AGGTGAATTTGAATATGTTT+TGG | - | chr6_1:6062116-6062135 | Msa0871160:intron | 25.0% |
| ! | ATGATTTAGTCACAACATTT+AGG | - | chr6_1:6062667-6062686 | Msa0871160:intron | 25.0% |
| ! | TTCTTGAATGGAACAATTTA+TGG | + | chr6_1:6062849-6062868 | None:intergenic | 25.0% |
| ! | TAAATTGTTCCATTCAAGAA+TGG | - | chr6_1:6062849-6062868 | Msa0871160:intron | 25.0% |
| ! | CATAGAATGTCTTTAAATAG+TGG | + | chr6_1:6062920-6062939 | None:intergenic | 25.0% |
| ! | AGAAAAGATACTTATTTGAG+TGG | - | chr6_1:6063083-6063102 | Msa0871160:intron | 25.0% |
| !!! | AATGACTGGTTTTTTTTACT+AGG | + | chr6_1:6063283-6063302 | None:intergenic | 25.0% |
| ! | ATGAAGACATAAGATTTCTT+GGG | + | chr6_1:6063901-6063920 | None:intergenic | 25.0% |
| ! | CAAAATCATTCCAATTTCAA+AGG | + | chr6_1:6063997-6064016 | None:intergenic | 25.0% |
| ! | ATCACTTAAAAAAAGTCTCA+TGG | + | chr6_1:6064024-6064043 | None:intergenic | 25.0% |
| !!! | GTCATTTTAAAAAAGTCTTG+AGG | + | chr6_1:6064066-6064085 | None:intergenic | 25.0% |
| ! | GTATTGGATTAAGATTCTAA+GGG | + | chr6_1:6064188-6064207 | None:intergenic | 25.0% |
| ! | TGTATTGGATTAAGATTCTA+AGG | + | chr6_1:6064189-6064208 | None:intergenic | 25.0% |
| ! | TCAAAAACAAGAACATTAAG+GGG | + | chr6_1:6064214-6064233 | None:intergenic | 25.0% |
| ! | CTCTTTATAAGATATATTGG+CGG | + | chr6_1:6064609-6064628 | None:intergenic | 25.0% |
| ! | ATAATACATAAGTGTACTTG+AGG | + | chr6_1:6064725-6064744 | None:intergenic | 25.0% |
| ! | CTACCTTTATTATGAATTTG+TGG | + | chr6_1:6064877-6064896 | None:intergenic | 25.0% |
| ! | AGATATACGTTATTAGATAG+AGG | + | chr6_1:6064933-6064952 | None:intergenic | 25.0% |
| ! | GGTAAGATTGAAATTCAATT+CGG | + | chr6_1:6065092-6065111 | None:intergenic | 25.0% |
| !! | TTTTGCCTTTGTATTAACTA+AGG | + | chr6_1:6065365-6065384 | None:intergenic | 25.0% |
| ! | TTTCAAATAGGTCCTTAAAA+GGG | - | chr6_1:6065527-6065546 | Msa0871160:intron | 25.0% |
| ! | AAATTTGGGCCTTTAAATTT+GGG | + | chr6_1:6065644-6065663 | None:intergenic | 25.0% |
| ! | AAAATTTGGGCCTTTAAATT+TGG | + | chr6_1:6065645-6065664 | None:intergenic | 25.0% |
| ! | TTTGGCATTATAATTGTCAT+GGG | - | chr6_1:6065772-6065791 | Msa0871160:intron | 25.0% |
| ! | CACAAAGATAAATGAGTATA+TGG | - | chr6_1:6065951-6065970 | Msa0871160:CDS | 25.0% |
| ! | GTGTGTATAAAGTATATTCT+TGG | - | chr6_1:6066134-6066153 | Msa0871160:intron | 25.0% |
| !! | TTTAGAATATTAAACCTCGT+AGG | + | chr6_1:6066523-6066542 | None:intergenic | 25.0% |
| ! | TATTATATGTGTTGGAAACA+TGG | + | chr6_1:6066747-6066766 | None:intergenic | 25.0% |
| !! | TGCAATCTTTATCTCATTTT+TGG | + | chr6_1:6066799-6066818 | None:intergenic | 25.0% |
| ! | TACTACACTAATGAATTCTA+TGG | + | chr6_1:6066931-6066950 | None:intergenic | 25.0% |
| ! | TCATTAGTGTAGTAACAAAA+CGG | - | chr6_1:6066937-6066956 | Msa0871160:intron | 25.0% |
| !!! | GATTTTTTTCGAATATGCAA+TGG | + | chr6_1:6066990-6067009 | None:intergenic | 25.0% |
| ! | TGCAAAAAAATAAAATGAGG+AGG | - | chr6_1:6067152-6067171 | Msa0871160:CDS | 25.0% |
| ! | GTTCAAAATGCAAAAACAAT+AGG | - | chr6_1:6067174-6067193 | Msa0871160:CDS | 25.0% |
| !!! | TTGCTTTGTTATTATAGAAC+TGG | + | chr6_1:6067665-6067684 | None:intergenic | 25.0% |
| !! | TACAGAAGTACTGTTATAAG+AGG | - | chr6_1:6059647-6059666 | Msa0871160:intron | 30.0% |
| !! | ACAGAAGTACTGTTATAAGA+GGG | - | chr6_1:6059648-6059667 | Msa0871160:intron | 30.0% |
| ATAAATGTTGCAAGGGAAAA+TGG | + | chr6_1:6060221-6060240 | None:intergenic | 30.0% | |
| ! | TGATCTAAAGTTAAATGAGC+TGG | - | chr6_1:6060306-6060325 | Msa0871160:intron | 30.0% |
| GATCGACTACATAAATCAAA+CGG | + | chr6_1:6060366-6060385 | None:intergenic | 30.0% | |
| ! | AGAGATTGCCTTATTATCTA+AGG | - | chr6_1:6060501-6060520 | Msa0871160:intron | 30.0% |
| ! | GAGATTGCCTTATTATCTAA+GGG | - | chr6_1:6060502-6060521 | Msa0871160:intron | 30.0% |
| ATCATGTCCCTTAGATAATA+AGG | + | chr6_1:6060512-6060531 | None:intergenic | 30.0% | |
| ! | TTACTCTAGAAATAACGGTT+AGG | - | chr6_1:6060536-6060555 | Msa0871160:intron | 30.0% |
| TCTGAGTTTATGTCATTGAA+AGG | - | chr6_1:6060579-6060598 | Msa0871160:intron | 30.0% | |
| GGATTATAAAAGGAACAAGA+AGG | + | chr6_1:6060609-6060628 | None:intergenic | 30.0% | |
| ! | AGGAGAACATGGATTATAAA+AGG | + | chr6_1:6060619-6060638 | None:intergenic | 30.0% |
| AATGAATGAAAAGGAGAACA+TGG | + | chr6_1:6060630-6060649 | None:intergenic | 30.0% | |
| ACGCAATCATGCTATTAATA+AGG | - | chr6_1:6060783-6060802 | Msa0871160:intron | 30.0% | |
| CATGGTGCAATATTATATGT+CGG | + | chr6_1:6060879-6060898 | None:intergenic | 30.0% | |
| !!! | TTATTGGTTTTATGGGACTT+TGG | + | chr6_1:6061005-6061024 | None:intergenic | 30.0% |
| AGTCCCATAAAACCAATAAA+CGG | - | chr6_1:6061006-6061025 | Msa0871160:intron | 30.0% | |
| !!! | AGACCGTTTATTGGTTTTAT+GGG | + | chr6_1:6061012-6061031 | None:intergenic | 30.0% |
| !!! | TAGACCGTTTATTGGTTTTA+TGG | + | chr6_1:6061013-6061032 | None:intergenic | 30.0% |
| !! | ATGCTTTGAGCTTTTTATGT+AGG | + | chr6_1:6061133-6061152 | None:intergenic | 30.0% |
| !! | GAGTTTGTTGTTTAGATTCA+AGG | - | chr6_1:6061253-6061272 | Msa0871160:intron | 30.0% |
| ATTCAAGGTAAAAGACAACA+AGG | - | chr6_1:6061268-6061287 | Msa0871160:intron | 30.0% | |
| TGTTTCTCAGTTCAATTCTT+CGG | - | chr6_1:6061377-6061396 | Msa0871160:intron | 30.0% | |
| ! | TTGAAACTGCATTTTTCTGA+TGG | + | chr6_1:6061480-6061499 | None:intergenic | 30.0% |
| ! | TATTTCTGCTATTATCTAGC+AGG | - | chr6_1:6061821-6061840 | Msa0871160:intron | 30.0% |
| ! | AATATTTAGAGTTGGTCCAT+TGG | - | chr6_1:6061946-6061965 | Msa0871160:intron | 30.0% |
| TACATAAGAATCACAACCAA+TGG | + | chr6_1:6061986-6062005 | None:intergenic | 30.0% | |
| ! | ATGTAAAGTGTCTTTCAAGT+TGG | - | chr6_1:6062001-6062020 | Msa0871160:intron | 30.0% |
| ! | GCAAGATATTTTTCTGATCA+TGG | - | chr6_1:6062029-6062048 | Msa0871160:intron | 30.0% |
| CAGTATAAGGACTTGAAATT+TGG | + | chr6_1:6062068-6062087 | None:intergenic | 30.0% | |
| AGTCCTTATACTGCATTTAT+TGG | - | chr6_1:6062075-6062094 | Msa0871160:intron | 30.0% | |
| TGACCAATAAATGCAGTATA+AGG | + | chr6_1:6062081-6062100 | None:intergenic | 30.0% | |
| CTGCATTTATTGGTCAATTA+AGG | - | chr6_1:6062085-6062104 | Msa0871160:intron | 30.0% | |
| !!! | GGTCAATTAAGGACTTTTTT+AGG | - | chr6_1:6062096-6062115 | Msa0871160:intron | 30.0% |
| AAAGTACATAGTCTCATCAA+TGG | + | chr6_1:6062372-6062391 | None:intergenic | 30.0% | |
| ATGTCAAATTCTCTCTTATG+TGG | + | chr6_1:6062584-6062603 | None:intergenic | 30.0% | |
| ! | GTTAAAAGCTCCAGTTTTTA+AGG | - | chr6_1:6062773-6062792 | Msa0871160:intron | 30.0% |
| AACCAGTCATTACAACATTT+AGG | - | chr6_1:6063292-6063311 | Msa0871160:intron | 30.0% | |
| ACCAGTCATTACAACATTTA+GGG | - | chr6_1:6063293-6063312 | Msa0871160:intron | 30.0% | |
| !! | GTATTGGATTAGGATTTTGA+AGG | - | chr6_1:6063320-6063339 | Msa0871160:intron | 30.0% |
| !! | CATGATTTTAGAAGACAATC+AGG | - | chr6_1:6063405-6063424 | Msa0871160:intron | 30.0% |
| ! | GACAATCAGGATTTTCAATT+TGG | - | chr6_1:6063418-6063437 | Msa0871160:intron | 30.0% |
| ! | TTTTTATGAGAGATAGAGAG+AGG | - | chr6_1:6063607-6063626 | Msa0871160:intron | 30.0% |
| ! | TTTTATGAGAGATAGAGAGA+GGG | - | chr6_1:6063608-6063627 | Msa0871160:intron | 30.0% |
| CATGAAGACATAAGATTTCT+TGG | + | chr6_1:6063902-6063921 | None:intergenic | 30.0% | |
| !!! | TAGATTTTGATGGATTGTGT+GGG | + | chr6_1:6063960-6063979 | None:intergenic | 30.0% |
| !!! | TTAGATTTTGATGGATTGTG+TGG | + | chr6_1:6063961-6063980 | None:intergenic | 30.0% |
| CAAAAACAAGAACATTAAGG+GGG | + | chr6_1:6064213-6064232 | None:intergenic | 30.0% | |
| ACATATATCGAATCATGATG+AGG | - | chr6_1:6064263-6064282 | Msa0871160:intron | 30.0% | |
| CATATATCGAATCATGATGA+GGG | - | chr6_1:6064264-6064283 | Msa0871160:intron | 30.0% | |
| ! | CTTCTTTTACGATGAAATGA+AGG | - | chr6_1:6064290-6064309 | Msa0871160:intron | 30.0% |
| CGTTATTAGATAGAGGAATA+TGG | + | chr6_1:6064926-6064945 | None:intergenic | 30.0% | |
| ! | TCCATTTTCAACATCATTGT+CGG | - | chr6_1:6064996-6065015 | Msa0871160:intron | 30.0% |
| TAAGGTCATTCCTATGAAAT+TGG | - | chr6_1:6065120-6065139 | Msa0871160:intron | 30.0% | |
| AGTAAAGACTCCAATTTCAT+AGG | + | chr6_1:6065133-6065152 | None:intergenic | 30.0% | |
| GTTTCAAATAGGTCCTTAAA+AGG | - | chr6_1:6065526-6065545 | Msa0871160:intron | 30.0% | |
| ATCATGATAGGTCCTTAAAA+GGG | + | chr6_1:6065570-6065589 | None:intergenic | 30.0% | |
| TATCATGATAGGTCCTTAAA+AGG | + | chr6_1:6065571-6065590 | None:intergenic | 30.0% | |
| TTAGATTTATTATGATGGCC+TGG | - | chr6_1:6065735-6065754 | Msa0871160:intron | 30.0% | |
| CTTTGGCATTATAATTGTCA+TGG | - | chr6_1:6065771-6065790 | Msa0871160:intron | 30.0% | |
| CTCATTTATCTTTGTGATGT+TGG | + | chr6_1:6065947-6065966 | None:intergenic | 30.0% | |
| ! | TATGATCTTTGTTTCTTGGT+TGG | + | chr6_1:6066011-6066030 | None:intergenic | 30.0% |
| AACCAAGAAACAAAGATCAT+AGG | - | chr6_1:6066010-6066029 | Msa0871160:CDS | 30.0% | |
| ! | TTCCTATGATCTTTGTTTCT+TGG | + | chr6_1:6066015-6066034 | None:intergenic | 30.0% |
| TCCCTAATATTTGTCTTTGA+AGG | - | chr6_1:6066250-6066269 | Msa0871160:CDS | 30.0% | |
| CCCTTCAAAGACAAATATTA+GGG | + | chr6_1:6066254-6066273 | None:intergenic | 30.0% | |
| CCCTAATATTTGTCTTTGAA+GGG | - | chr6_1:6066251-6066270 | Msa0871160:CDS | 30.0% | |
| TCCCTTCAAAGACAAATATT+AGG | + | chr6_1:6066255-6066274 | None:intergenic | 30.0% | |
| ! | GATATTTTCACATTAAGCCA+CGG | - | chr6_1:6066296-6066315 | Msa0871160:CDS | 30.0% |
| ! | ATATTTTCACATTAAGCCAC+GGG | - | chr6_1:6066297-6066316 | Msa0871160:CDS | 30.0% |
| AGACATTCGTAAAGTATGTT+TGG | + | chr6_1:6066500-6066519 | None:intergenic | 30.0% | |
| TATACCAAGAGATAAGTGTT+CGG | + | chr6_1:6066578-6066597 | None:intergenic | 30.0% | |
| AATTAACACGAAACTCCATA+GGG | + | chr6_1:6066707-6066726 | None:intergenic | 30.0% | |
| AGTATCAAGAATGTATCGTA+GGG | + | chr6_1:6066871-6066890 | None:intergenic | 30.0% | |
| AAGTATCAAGAATGTATCGT+AGG | + | chr6_1:6066872-6066891 | None:intergenic | 30.0% | |
| GATACATTCTTGATACTTAG+TGG | - | chr6_1:6066874-6066893 | Msa0871160:intron | 30.0% | |
| CACAACACAAACTTATCATT+AGG | - | chr6_1:6067046-6067065 | Msa0871160:CDS | 30.0% | |
| TGAATGAAGAGAAAGTTGTT+TGG | - | chr6_1:6067113-6067132 | Msa0871160:intron | 30.0% | |
| GAATGAAGAGAAAGTTGTTT+GGG | - | chr6_1:6067114-6067133 | Msa0871160:intron | 30.0% | |
| CAAATCTAAATAGAACCGAA+GGG | + | chr6_1:6067278-6067297 | None:intergenic | 30.0% | |
| TCAAATCTAAATAGAACCGA+AGG | + | chr6_1:6067279-6067298 | None:intergenic | 30.0% | |
| TTGATTGTATACGAGATAAG+AGG | + | chr6_1:6067350-6067369 | None:intergenic | 30.0% | |
| !!! | GTTTTAGAGGTTACAAATAG+AGG | + | chr6_1:6067594-6067613 | None:intergenic | 30.0% |
| ! | TTGCACATTTTACAGATAGA+GGG | - | chr6_1:6067729-6067748 | Msa0871160:intron | 30.0% |
| GTTGAATGTTTGATAAGCAT+AGG | + | chr6_1:6067766-6067785 | None:intergenic | 30.0% | |
| GTTGTTCGGTCTTAATCAAA+TGG | - | chr6_1:6059428-6059447 | Msa0871160:intron | 35.0% | |
| TAACAACAGCAAGCATAACA+TGG | + | chr6_1:6059509-6059528 | None:intergenic | 35.0% | |
| ACACACTTCTGTAGTACTAA+TGG | + | chr6_1:6059564-6059583 | None:intergenic | 35.0% | |
| CTGTGATCATTACATACAGA+CGG | + | chr6_1:6059621-6059640 | None:intergenic | 35.0% | |
| ACTTGTTTGCAGATTCTTCA+AGG | + | chr6_1:6059733-6059752 | None:intergenic | 35.0% | |
| TTGAAGAATCTGCAAACAAG+TGG | - | chr6_1:6059732-6059751 | Msa0871160:intron | 35.0% | |
| AAACATATTGTCATTGGAGC+AGG | + | chr6_1:6059773-6059792 | None:intergenic | 35.0% | |
| ! | TTTTCCGACTGATGTTAATC+CGG | + | chr6_1:6059955-6059974 | None:intergenic | 35.0% |
| ATAGTAGTTGGATGAAAAGC+TGG | + | chr6_1:6059978-6059997 | None:intergenic | 35.0% | |
| CCTCTCAATGTAATAGTAGT+TGG | + | chr6_1:6059990-6060009 | None:intergenic | 35.0% | |
| CCAACTACTATTACATTGAG+AGG | - | chr6_1:6059987-6060006 | Msa0871160:intron | 35.0% | |
| ! | ATTGAGAGGCATAATGTTCT+TGG | - | chr6_1:6060001-6060020 | Msa0871160:intron | 35.0% |
| TTTCTTGTGCGCGAAATTTA+TGG | - | chr6_1:6060083-6060102 | Msa0871160:intron | 35.0% | |
| AACAGAAAGAGTTACAAGCT+TGG | + | chr6_1:6060157-6060176 | None:intergenic | 35.0% | |
| ! | AACTCTTTCTGTTTAAGACC+AGG | - | chr6_1:6060164-6060183 | Msa0871160:intron | 35.0% |
| ! | ATGTATGAGTGTGATTTGTG+TGG | - | chr6_1:6060681-6060700 | Msa0871160:intron | 35.0% |
| GAAAAAACCTTGTTGCAAAC+AGG | + | chr6_1:6060838-6060857 | None:intergenic | 35.0% | |
| TTTAAATTGCTCCAAGGATG+TGG | + | chr6_1:6060932-6060951 | None:intergenic | 35.0% | |
| GATCTTGTCATTATCCACAA+TGG | + | chr6_1:6061159-6061178 | None:intergenic | 35.0% | |
| GAGAAACAAGTTAGTGACAT+TGG | - | chr6_1:6061179-6061198 | Msa0871160:intron | 35.0% | |
| TAGTGACATTGGTGAAACAT+CGG | - | chr6_1:6061190-6061209 | Msa0871160:intron | 35.0% | |
| CTCTTGAAATATGCACTTTG+TGG | - | chr6_1:6061424-6061443 | Msa0871160:intron | 35.0% | |
| TGAAATATGCACTTTGTGGA+TGG | - | chr6_1:6061428-6061447 | Msa0871160:intron | 35.0% | |
| ! | GGTGTTGTAAGTAATAGTAC+TGG | - | chr6_1:6061549-6061568 | Msa0871160:intron | 35.0% |
| AAACTTCAGTTGTGCTTCTA+TGG | + | chr6_1:6061577-6061596 | None:intergenic | 35.0% | |
| ACACTACATAATGACATAGC+AGG | - | chr6_1:6061721-6061740 | Msa0871160:intron | 35.0% | |
| AATGTTCGCCACAAAGAATT+AGG | - | chr6_1:6061756-6061775 | Msa0871160:intron | 35.0% | |
| AACTTGATCAGTAAGTAAGC+TGG | + | chr6_1:6061865-6061884 | None:intergenic | 35.0% | |
| TACATGATTTCAGTGAGACA+AGG | - | chr6_1:6062422-6062441 | Msa0871160:intron | 35.0% | |
| TTGGTTCATGCTTGAAATTG+AGG | + | chr6_1:6062504-6062523 | None:intergenic | 35.0% | |
| TTCAAGCATGAACCAAATGT+TGG | - | chr6_1:6062508-6062527 | Msa0871160:intron | 35.0% | |
| TCAAGCATGAACCAAATGTT+GGG | - | chr6_1:6062509-6062528 | Msa0871160:intron | 35.0% | |
| TTCCATTCAAGAATGGAACT+TGG | - | chr6_1:6062856-6062875 | Msa0871160:intron | 35.0% | |
| TCCATTCAAGAATGGAACTT+GGG | - | chr6_1:6062857-6062876 | Msa0871160:intron | 35.0% | |
| CCAGTCATTACAACATTTAG+GGG | - | chr6_1:6063294-6063313 | Msa0871160:intron | 35.0% | |
| CAGTCATTACAACATTTAGG+GGG | - | chr6_1:6063295-6063314 | Msa0871160:intron | 35.0% | |
| AGTCATTACAACATTTAGGG+GGG | - | chr6_1:6063296-6063315 | Msa0871160:intron | 35.0% | |
| TTTATGAGAGATAGAGAGAG+GGG | - | chr6_1:6063609-6063628 | Msa0871160:intron | 35.0% | |
| TCATGAATAAACACGACTCT+TGG | - | chr6_1:6064424-6064443 | Msa0871160:intron | 35.0% | |
| GCATGAACCACCAATATATT+TGG | - | chr6_1:6064487-6064506 | Msa0871160:intron | 35.0% | |
| ACCGACAATGATGTTGAAAA+TGG | + | chr6_1:6065000-6065019 | None:intergenic | 35.0% | |
| CAATCTTACCACCATACATA+AGG | - | chr6_1:6065102-6065121 | Msa0871160:intron | 35.0% | |
| CATAGGAATGACCTTATGTA+TGG | + | chr6_1:6065116-6065135 | None:intergenic | 35.0% | |
| AGGTCCTTAAAAGGGTAATA+AGG | - | chr6_1:6065535-6065554 | Msa0871160:intron | 35.0% | |
| ! | AGGACCTTATTACCCTTTTA+AGG | + | chr6_1:6065542-6065561 | None:intergenic | 35.0% |
| ! | AGGTCCTTATTACCCTTTTA+AGG | - | chr6_1:6065555-6065574 | Msa0871160:intron | 35.0% |
| AGGTCCTTAAAAGGGTAATA+AGG | + | chr6_1:6065535-6065554 | None:intergenic | 35.0% | |
| !! | GGTGTTGTTATGGAAATTCA+AGG | + | chr6_1:6065926-6065945 | None:intergenic | 35.0% |
| !! | TTGTGATGTTGGTGTTGTTA+TGG | + | chr6_1:6065936-6065955 | None:intergenic | 35.0% |
| CACAATCTTCATAGCAAAAG+AGG | - | chr6_1:6066680-6066699 | Msa0871160:intron | 35.0% | |
| CAATTAACACGAAACTCCAT+AGG | + | chr6_1:6066708-6066727 | None:intergenic | 35.0% | |
| TGGAGTTTCGTGTTAATTGA+AGG | - | chr6_1:6066709-6066728 | Msa0871160:intron | 35.0% | |
| TCTAACCTGTATGCAATTTG+GGG | + | chr6_1:6067073-6067092 | None:intergenic | 35.0% | |
| CTCTAACCTGTATGCAATTT+GGG | + | chr6_1:6067074-6067093 | None:intergenic | 35.0% | |
| TCTCTAACCTGTATGCAATT+TGG | + | chr6_1:6067075-6067094 | None:intergenic | 35.0% | |
| !! | GAGAAAGTTGTTTGGGTTTT+TGG | - | chr6_1:6067121-6067140 | Msa0871160:intron | 35.0% |
| TAGAGGTTACAAATAGAGGT+TGG | + | chr6_1:6067590-6067609 | None:intergenic | 35.0% | |
| AAACCTCCATAACTGAGTTT+AGG | - | chr6_1:6067610-6067629 | Msa0871160:intron | 35.0% | |
| CATCAACCTAAACTCAGTTA+TGG | + | chr6_1:6067619-6067638 | None:intergenic | 35.0% | |
| ! | GTTGCACATTTTACAGATAG+AGG | - | chr6_1:6067728-6067747 | Msa0871160:intron | 35.0% |
| ! | TGCACATTTTACAGATAGAG+GGG | - | chr6_1:6067730-6067749 | Msa0871160:intron | 35.0% |
| TCGGTCTTAATCAAATGGCA+CGG | - | chr6_1:6059433-6059452 | Msa0871160:intron | 40.0% | |
| !! | GTTATGCTTGCTGTTGTTAG+CGG | - | chr6_1:6059510-6059529 | Msa0871160:intron | 40.0% |
| TCTCATAGTCGAAGCAGAAT+CGG | + | chr6_1:6059688-6059707 | None:intergenic | 40.0% | |
| TCTGCAAACAAGTGGAAACT+TGG | - | chr6_1:6059740-6059759 | Msa0871160:intron | 40.0% | |
| GTATAACCAACCACTGCATT+GGG | + | chr6_1:6059813-6059832 | None:intergenic | 40.0% | |
| AGTATAACCAACCACTGCAT+TGG | + | chr6_1:6059814-6059833 | None:intergenic | 40.0% | |
| CTATAATGACGGTGAAGCAT+TGG | - | chr6_1:6059919-6059938 | Msa0871160:intron | 40.0% | |
| AATCCCGGATTAACATCAGT+CGG | - | chr6_1:6059948-6059967 | Msa0871160:intron | 40.0% | |
| TTTCCGACTGATGTTAATCC+GGG | + | chr6_1:6059954-6059973 | None:intergenic | 40.0% | |
| ! | TGATGCATGTTCTTGTTTGC+AGG | - | chr6_1:6060036-6060055 | Msa0871160:intron | 40.0% |
| GAAAGCTAGTCGCATTTCTA+CGG | + | chr6_1:6060067-6060086 | None:intergenic | 40.0% | |
| CGCGAAATTTATGGAAATCC+AGG | - | chr6_1:6060092-6060111 | Msa0871160:intron | 40.0% | |
| GCAAGGGAAAATGGCTAAAT+GGG | + | chr6_1:6060212-6060231 | None:intergenic | 40.0% | |
| TGCAAGGGAAAATGGCTAAA+TGG | + | chr6_1:6060213-6060232 | None:intergenic | 40.0% | |
| ACCATTAGTCCGTTATCTTC+TGG | - | chr6_1:6060250-6060269 | Msa0871160:intron | 40.0% | |
| AACACCAAGCCAGAAGATAA+CGG | + | chr6_1:6060262-6060281 | None:intergenic | 40.0% | |
| ! | GAGAAAGACGTGATTTTGGA+TGG | - | chr6_1:6060328-6060347 | Msa0871160:intron | 40.0% |
| ATGTAGTCGATCCCACTTAA+TGG | - | chr6_1:6060374-6060393 | Msa0871160:intron | 40.0% | |
| TGTAGTCGATCCCACTTAAT+GGG | - | chr6_1:6060375-6060394 | Msa0871160:intron | 40.0% | |
| ! | CAAGCCTTATCCCATTAAGT+GGG | + | chr6_1:6060388-6060407 | None:intergenic | 40.0% |
| ! | ACAAGCCTTATCCCATTAAG+TGG | + | chr6_1:6060389-6060408 | None:intergenic | 40.0% |
| ! | AGTGTGATTTGTGTGGCAAA+CGG | - | chr6_1:6060688-6060707 | Msa0871160:intron | 40.0% |
| TCTTGTGTAGAGATTGTGAG+CGG | + | chr6_1:6060756-6060775 | None:intergenic | 40.0% | |
| TAGTTGTCCTGTTTGCAACA+AGG | - | chr6_1:6060828-6060847 | Msa0871160:intron | 40.0% | |
| ! | TACTCTTGGAACCCTTTTCA+TGG | + | chr6_1:6060897-6060916 | None:intergenic | 40.0% |
| GGTTGGAGATTGAATACTCT+TGG | + | chr6_1:6060911-6060930 | None:intergenic | 40.0% | |
| ! | ATACTGGTTAAGTCAATCGC+TGG | + | chr6_1:6060976-6060995 | None:intergenic | 40.0% |
| !!! | TTGGTTTTATGGGACTTTGG+TGG | + | chr6_1:6061002-6061021 | None:intergenic | 40.0% |
| CCTCTTGATAGACCGTTTAT+TGG | + | chr6_1:6061021-6061040 | None:intergenic | 40.0% | |
| CCAATAAACGGTCTATCAAG+AGG | - | chr6_1:6061018-6061037 | Msa0871160:intron | 40.0% | |
| CAAGGTCGTGCAATGATAAT+TGG | - | chr6_1:6061286-6061305 | Msa0871160:intron | 40.0% | |
| AGTTCAATTCTTCGGCTCAA+TGG | - | chr6_1:6061385-6061404 | Msa0871160:intron | 40.0% | |
| ! | CACTTTGTGGATGGAAGTTT+TGG | - | chr6_1:6061437-6061456 | Msa0871160:intron | 40.0% |
| ! | TTATCTAGCAGGCTGTTTCA+TGG | - | chr6_1:6061832-6061851 | Msa0871160:intron | 40.0% |
| ! | TATCTAGCAGGCTGTTTCAT+GGG | - | chr6_1:6061833-6061852 | Msa0871160:intron | 40.0% |
| TACTGATCAAGTTCCTGTGA+AGG | - | chr6_1:6061872-6061891 | Msa0871160:intron | 40.0% | |
| CCTTGACAAGCAAAATTCCT+TGG | + | chr6_1:6062220-6062239 | None:intergenic | 40.0% | |
| ! | CCAAGGAATTTTGCTTGTCA+AGG | - | chr6_1:6062217-6062236 | Msa0871160:intron | 40.0% |
| TCTCTTCATGACCCAACATT+TGG | + | chr6_1:6062523-6062542 | None:intergenic | 40.0% | |
| TCACGTCTTCACTCAAATGT+TGG | - | chr6_1:6062603-6062622 | Msa0871160:intron | 40.0% | |
| !! | AGTTTTTAAGGAAAGCGACC+CGG | - | chr6_1:6062785-6062804 | Msa0871160:intron | 40.0% |
| GATCGAACTCCAAATTATCC+GGG | + | chr6_1:6062806-6062825 | None:intergenic | 40.0% | |
| CGATCGAACTCCAAATTATC+CGG | + | chr6_1:6062807-6062826 | None:intergenic | 40.0% | |
| ACCCAAGTTCCATTCTTGAA+TGG | + | chr6_1:6062861-6062880 | None:intergenic | 40.0% | |
| CCCCTAAATGTTGTAATGAC+TGG | + | chr6_1:6063297-6063316 | None:intergenic | 40.0% | |
| AAAAGAGAGGAGAGAGAGAA+GGG | - | chr6_1:6063817-6063836 | Msa0871160:intron | 40.0% | |
| GAACATTAAGGGGGATGTAT+TGG | + | chr6_1:6064204-6064223 | None:intergenic | 40.0% | |
| CGGTTTGTACATGTAGTTGA+TGG | + | chr6_1:6064589-6064608 | None:intergenic | 40.0% | |
| AGGAATGACCTTATGTATGG+TGG | + | chr6_1:6065113-6065132 | None:intergenic | 40.0% | |
| TCGGCAATGCATATCATGAT+AGG | + | chr6_1:6065582-6065601 | None:intergenic | 40.0% | |
| ATATGCATTGCCGACCATTA+GGG | - | chr6_1:6065588-6065607 | Msa0871160:intron | 40.0% | |
| TTTGGGCCTTTAAATTTGGG+AGG | + | chr6_1:6065641-6065660 | None:intergenic | 40.0% | |
| GTTCAACTCTCACCAAATGT+GGG | - | chr6_1:6065794-6065813 | Msa0871160:intron | 40.0% | |
| AATCGAGTATCTGAGAGAGA+TGG | + | chr6_1:6065897-6065916 | None:intergenic | 40.0% | |
| GTCTCATGTCATTGAATCTC+TGG | - | chr6_1:6067479-6067498 | Msa0871160:five_prime_UTR | 40.0% | |
| ! | TGATAATCTTGCTCTGAGTG+CGG | - | chr6_1:6067561-6067580 | Msa0871160:intron | 40.0% |
| !! | CTCAGTTATGGAGGTTTTAG+AGG | + | chr6_1:6067607-6067626 | None:intergenic | 40.0% |
| CAACCTAAACTCAGTTATGG+AGG | + | chr6_1:6067616-6067635 | None:intergenic | 40.0% | |
| ! | GCACATTTTACAGATAGAGG+GGG | - | chr6_1:6067731-6067750 | Msa0871160:intron | 40.0% |
| CTGCGGAATATCATTGTCAG+CGG | - | chr6_1:6059464-6059483 | Msa0871160:intron | 45.0% | |
| ATAACATGGAGTGTGGGGAT+TGG | + | chr6_1:6059495-6059514 | None:intergenic | 45.0% | |
| CAAGCATAACATGGAGTGTG+GGG | + | chr6_1:6059500-6059519 | None:intergenic | 45.0% | |
| GCAAGCATAACATGGAGTGT+GGG | + | chr6_1:6059501-6059520 | None:intergenic | 45.0% | |
| AGCAAGCATAACATGGAGTG+TGG | + | chr6_1:6059502-6059521 | None:intergenic | 45.0% | |
| TTGCTTTCATCCCAATGCAG+TGG | - | chr6_1:6059800-6059819 | Msa0871160:intron | 45.0% | |
| TTTCATCCCAATGCAGTGGT+TGG | - | chr6_1:6059804-6059823 | Msa0871160:intron | 45.0% | |
| !! | AAGCATTGGTCTCTGAATCC+CGG | - | chr6_1:6059933-6059952 | Msa0871160:intron | 45.0% |
| CTAAATGGGACAATGCTGCA+GGG | + | chr6_1:6060198-6060217 | None:intergenic | 45.0% | |
| !! | GCCAGAAGATAACGGACTAA+TGG | + | chr6_1:6060254-6060273 | None:intergenic | 45.0% |
| ! | TAGTCCGTTATCTTCTGGCT+TGG | - | chr6_1:6060255-6060274 | Msa0871160:intron | 45.0% |
| ! | GCTGGAGAAAGACGTGATTT+TGG | - | chr6_1:6060324-6060343 | Msa0871160:intron | 45.0% |
| CGATCCCACTTAATGGGATA+AGG | - | chr6_1:6060381-6060400 | Msa0871160:intron | 45.0% | |
| TTCAACTCTGGCAACACACT+AGG | - | chr6_1:6060711-6060730 | Msa0871160:intron | 45.0% | |
| TCAATCTCCAACCACATCCT+TGG | - | chr6_1:6060918-6060937 | Msa0871160:intron | 45.0% | |
| AATTGCTCCAAGGATGTGGT+TGG | + | chr6_1:6060928-6060947 | None:intergenic | 45.0% | |
| GATATGTCTTGCGCTACTGT+CGG | - | chr6_1:6061089-6061108 | Msa0871160:intron | 45.0% | |
| ! | GCTCAAAGCATCAACCATTG+TGG | - | chr6_1:6061142-6061161 | Msa0871160:intron | 45.0% |
| TGTGCTCAATGGAATCAGTG+AGG | - | chr6_1:6061349-6061368 | Msa0871160:intron | 45.0% | |
| TGATCAAGTTCCTGTGAAGG+TGG | - | chr6_1:6061875-6061894 | Msa0871160:intron | 45.0% | |
| TTTGGTCCATGTGTCAGAGT+TGG | + | chr6_1:6062160-6062179 | None:intergenic | 45.0% | |
| GGGTCATGAAGAGAGTTTAG+AGG | - | chr6_1:6062529-6062548 | Msa0871160:intron | 45.0% | |
| ! | GGGTCGCTTTCCTTAAAAAC+TGG | + | chr6_1:6062786-6062805 | None:intergenic | 45.0% |
| ! | CAACATTTAGGGGGGTGTAT+TGG | - | chr6_1:6063304-6063323 | Msa0871160:intron | 45.0% |
| ! | TTAGGGGGGTGTATTGGATT+AGG | - | chr6_1:6063310-6063329 | Msa0871160:intron | 45.0% |
| AGAGAGAGAGAGAGAGAGAA+GGG | - | chr6_1:6063743-6063762 | Msa0871160:intron | 45.0% | |
| AGAGAGAGACGAAGAGAGAA+GGG | - | chr6_1:6063773-6063792 | Msa0871160:intron | 45.0% | |
| AGAGAGGAGGAAGAAAAGAG+AGG | - | chr6_1:6063804-6063823 | Msa0871160:intron | 45.0% | |
| GAAAAGAGAGGAGAGAGAGA+AGG | - | chr6_1:6063816-6063835 | Msa0871160:intron | 45.0% | |
| AAGGGAGAAGAGAGGGAAAA+AGG | - | chr6_1:6063835-6063854 | Msa0871160:intron | 45.0% | |
| AGGGAGAAGAGAGGGAAAAA+GGG | - | chr6_1:6063836-6063855 | Msa0871160:intron | 45.0% | |
| GATATGCATTGCCGACCATT+AGG | - | chr6_1:6065587-6065606 | Msa0871160:intron | 45.0% | |
| TATGCATTGCCGACCATTAG+GGG | - | chr6_1:6065589-6065608 | Msa0871160:intron | 45.0% | |
| AGTTGTTTGCATCCCCCTAA+TGG | + | chr6_1:6065605-6065624 | None:intergenic | 45.0% | |
| ! | CAAAGCGCTACTTTAGTACC+AGG | + | chr6_1:6065756-6065775 | None:intergenic | 45.0% |
| CTGGTACTAAAGTAGCGCTT+TGG | - | chr6_1:6065754-6065773 | Msa0871160:intron | 45.0% | |
| GGTTCAACTCTCACCAAATG+TGG | - | chr6_1:6065793-6065812 | Msa0871160:intron | 45.0% | |
| GTGAGAGTTGAACCCACATT+TGG | + | chr6_1:6065809-6065828 | None:intergenic | 45.0% | |
| AATGTGGGTTCAACTCTCAC+AGG | - | chr6_1:6065809-6065828 | Msa0871160:intron | 45.0% | |
| CTTTACGAATGTCTCCTACG+AGG | - | chr6_1:6066506-6066525 | Msa0871160:intron | 45.0% | |
| GTTGCCGAACACTTATCTCT+TGG | - | chr6_1:6066571-6066590 | Msa0871160:intron | 45.0% | |
| CATAGCAAAAGAGGTCCCTA+TGG | - | chr6_1:6066689-6066708 | Msa0871160:intron | 45.0% | |
| TAGGACCCCAAATTGCATAC+AGG | - | chr6_1:6067065-6067084 | Msa0871160:CDS | 45.0% | |
| ! | GATAATCTTGCTCTGAGTGC+GGG | - | chr6_1:6067562-6067581 | Msa0871160:intron | 45.0% |
| !!! | AAAATTATTTGATTTTATTA+GGG | + | chr6_1:6065174-6065193 | None:intergenic | 5.0% |
| !!! | AAAAATTATTTGATTTTATT+AGG | + | chr6_1:6065175-6065194 | None:intergenic | 5.0% |
| !! | ACATATAAAAATAAAAATTT+GGG | + | chr6_1:6065658-6065677 | None:intergenic | 5.0% |
| !! | TACATATAAAAATAAAAATT+TGG | + | chr6_1:6065659-6065678 | None:intergenic | 5.0% |
| !! | TTGAATATAATATTATTATA+AGG | + | chr6_1:6066451-6066470 | None:intergenic | 5.0% |
| ! | CGGTGAGAAGCTTTTCAGCT+TGG | - | chr6_1:6059530-6059549 | Msa0871160:intron | 50.0% |
| ! | AGTCGAAGCAGAATCGGTTC+TGG | + | chr6_1:6059682-6059701 | None:intergenic | 50.0% |
| CAAGCTTGGCATTTGCACCA+GGG | + | chr6_1:6060143-6060162 | None:intergenic | 50.0% | |
| ACAAGCTTGGCATTTGCACC+AGG | + | chr6_1:6060144-6060163 | None:intergenic | 50.0% | |
| GCTAAATGGGACAATGCTGC+AGG | + | chr6_1:6060199-6060218 | None:intergenic | 50.0% | |
| TGTGGCAAACGGTTCAACTC+TGG | - | chr6_1:6060699-6060718 | Msa0871160:intron | 50.0% | |
| AACTCTGGCAACACACTAGG+TGG | - | chr6_1:6060714-6060733 | Msa0871160:intron | 50.0% | |
| TGTGTAGAGATTGTGAGCGG+CGG | + | chr6_1:6060753-6060772 | None:intergenic | 50.0% | |
| CTGGTTAAGTCAATCGCTGG+TGG | + | chr6_1:6060973-6060992 | None:intergenic | 50.0% | |
| ! | ACTGTCGGTGGTGATGATCA+TGG | - | chr6_1:6061104-6061123 | Msa0871160:intron | 50.0% |
| ! | AGCAGGCTGTTTCATGGGAT+TGG | - | chr6_1:6061838-6061857 | Msa0871160:intron | 50.0% |
| ! | GTTCCTGTGAAGGTGGATTC+TGG | - | chr6_1:6061882-6061901 | Msa0871160:intron | 50.0% |
| TGTCCAGAATCCACCTTCAC+AGG | + | chr6_1:6061888-6061907 | None:intergenic | 50.0% | |
| ! | GGTCCATTGGTTGTGCTTGT+TGG | - | chr6_1:6061959-6061978 | Msa0871160:intron | 50.0% |
| GGACCAACAAGCACAACCAA+TGG | + | chr6_1:6061965-6061984 | None:intergenic | 50.0% | |
| ! | GGTTGTGCTTGTTGGTCCAT+TGG | - | chr6_1:6061967-6061986 | Msa0871160:intron | 50.0% |
| !!! | TCAGAGTTGGACTGGCGTTT+TGG | + | chr6_1:6062147-6062166 | None:intergenic | 50.0% |
| TCCATGTGTCAGAGTTGGAC+TGG | + | chr6_1:6062155-6062174 | None:intergenic | 50.0% | |
| GGAAAGCGACCCGGATAATT+TGG | - | chr6_1:6062794-6062813 | Msa0871160:intron | 50.0% | |
| GATAGAGAGAGGGGAAAGAG+AGG | - | chr6_1:6063618-6063637 | Msa0871160:intron | 50.0% | |
| GAAAGAGAGGAGGGAGAGAA+GGG | - | chr6_1:6063631-6063650 | Msa0871160:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr6_1:6063666-6063685 | Msa0871160:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+AGG | - | chr6_1:6063667-6063686 | Msa0871160:intron | 50.0% | |
| GAGAGAGAGACGAAGAGAGA+AGG | - | chr6_1:6063772-6063791 | Msa0871160:intron | 50.0% | |
| GAGAGAGACGAAGAGAGAAG+GGG | - | chr6_1:6063774-6063793 | Msa0871160:intron | 50.0% | |
| AGAGAGACGAAGAGAGAAGG+GGG | - | chr6_1:6063775-6063794 | Msa0871160:intron | 50.0% | |
| AGAGAGAGAAGGGAGAAGAG+AGG | - | chr6_1:6063753-6063772 | Msa0871160:intron | 50.0% | |
| GAGAGAGAAGGGAGAAGAGA+GGG | - | chr6_1:6063754-6063773 | Msa0871160:intron | 50.0% | |
| ATGCATTGCCGACCATTAGG+GGG | - | chr6_1:6065590-6065609 | Msa0871160:intron | 50.0% | |
| GTTTGCATCCCCCTAATGGT+CGG | + | chr6_1:6065601-6065620 | None:intergenic | 50.0% | |
| TGCAAACAACTCTACCGAGC+TGG | - | chr6_1:6065614-6065633 | Msa0871160:intron | 50.0% | |
| GCAAACAACTCTACCGAGCT+GGG | - | chr6_1:6065615-6065634 | Msa0871160:intron | 50.0% | |
| TAAATTTGGGAGGCCCAGCT+CGG | + | chr6_1:6065631-6065650 | None:intergenic | 50.0% | |
| GCTGGGCCTCCCAAATTTAA+AGG | - | chr6_1:6065632-6065651 | Msa0871160:intron | 50.0% | |
| GCGTTCTGCTAGGGCAAATA+TGG | + | chr6_1:6065871-6065890 | None:intergenic | 50.0% | |
| AGATGGCTAGCGTTCTGCTA+GGG | + | chr6_1:6065880-6065899 | None:intergenic | 50.0% | |
| TTCACATTAAGCCACGGGAG+TGG | - | chr6_1:6066302-6066321 | Msa0871160:CDS | 50.0% | |
| TATTCGAACCCCCTGATCCA+AGG | + | chr6_1:6066348-6066367 | None:intergenic | 50.0% | |
| ATGGCACGGACTTGTGACTG+CGG | - | chr6_1:6059447-6059466 | Msa0871160:intron | 55.0% | |
| !! | GGGACTTTGGTGGCGAATAC+TGG | + | chr6_1:6060992-6061011 | None:intergenic | 55.0% |
| ATGTCTTGCGCTACTGTCGG+TGG | - | chr6_1:6061092-6061111 | Msa0871160:intron | 55.0% | |
| TGGTGAAACATCGGCGACCA+AGG | - | chr6_1:6061199-6061218 | Msa0871160:intron | 55.0% | |
| !!! | AGTTGGACTGGCGTTTTGGC+TGG | + | chr6_1:6062143-6062162 | None:intergenic | 55.0% |
| GCCAGTCCAACTCTGACACA+TGG | - | chr6_1:6062151-6062170 | Msa0871160:intron | 55.0% | |
| CACATGGACCAAACGTCCTC+CGG | - | chr6_1:6062167-6062186 | Msa0871160:intron | 55.0% | |
| ACCAAACGTCCTCCGGACTA+AGG | - | chr6_1:6062174-6062193 | Msa0871160:intron | 55.0% | |
| AAACGTCCTCCGGACTAAGG+CGG | - | chr6_1:6062177-6062196 | Msa0871160:intron | 55.0% | |
| ATCGCTGCAGGAATACGCCA+AGG | - | chr6_1:6062200-6062219 | Msa0871160:intron | 55.0% | |
| AGAGAGAGGGGAAAGAGAGG+AGG | - | chr6_1:6063621-6063640 | Msa0871160:intron | 55.0% | |
| GAGAGAGGGGAAAGAGAGGA+GGG | - | chr6_1:6063622-6063641 | Msa0871160:intron | 55.0% | |
| GGAAAGAGAGGAGGGAGAGA+AGG | - | chr6_1:6063630-6063649 | Msa0871160:intron | 55.0% | |
| GAGATGGCTAGCGTTCTGCT+AGG | + | chr6_1:6065881-6065900 | None:intergenic | 55.0% | |
| GTTGCCAGGACCTTGGATCA+GGG | - | chr6_1:6066335-6066354 | Msa0871160:intron | 55.0% | |
| TTGCCAGGACCTTGGATCAG+GGG | - | chr6_1:6066336-6066355 | Msa0871160:intron | 55.0% | |
| TGCATCCCCTCACCACAATG+TGG | - | chr6_1:6067234-6067253 | Msa0871160:intron | 55.0% | |
| CAGAGCCACATTGTGGTGAG+GGG | + | chr6_1:6067242-6067261 | None:intergenic | 55.0% | |
| GCAGAGCCACATTGTGGTGA+GGG | + | chr6_1:6067243-6067262 | None:intergenic | 55.0% | |
| TCAGTGGCAGAGCCACATTG+TGG | + | chr6_1:6067249-6067268 | None:intergenic | 55.0% | |
| ! | AATGTGGCTCTGCCACTGAG+TGG | - | chr6_1:6067250-6067269 | Msa0871160:intron | 55.0% |
| CCAGGCCCGCTTCAGTTTGA+CGG | - | chr6_1:6060110-6060129 | Msa0871160:intron | 60.0% | |
| CAGGGCCGTCAAACTGAAGC+GGG | + | chr6_1:6060118-6060137 | None:intergenic | 60.0% | |
| CCAGGGCCGTCAAACTGAAG+CGG | + | chr6_1:6060119-6060138 | None:intergenic | 60.0% | |
| GGCATTTGCACCAGGGTCCA+GGG | + | chr6_1:6060136-6060155 | None:intergenic | 60.0% | |
| TGGCATTTGCACCAGGGTCC+AGG | + | chr6_1:6060137-6060156 | None:intergenic | 60.0% | |
| TGCTGCAGGGCATGTAGTCC+TGG | + | chr6_1:6060185-6060204 | None:intergenic | 60.0% | |
| TGAGCGGCGGTGAGATGTTG+TGG | + | chr6_1:6060740-6060759 | None:intergenic | 60.0% | |
| GCCTTAGTCCGGAGGACGTT+TGG | + | chr6_1:6062178-6062197 | None:intergenic | 60.0% | |
| TGCAGCGATCCGCCTTAGTC+CGG | + | chr6_1:6062189-6062208 | None:intergenic | 60.0% | |
| GAGAAGGGGGAGAGAGAGAG+AGG | - | chr6_1:6063788-6063807 | Msa0871160:intron | 60.0% | |
| AAGGGGGAGAGAGAGAGAGG+AGG | - | chr6_1:6063791-6063810 | Msa0871160:intron | 60.0% | |
| CGTTGCCAGGACCTTGGATC+AGG | - | chr6_1:6066334-6066353 | Msa0871160:intron | 60.0% | |
| TGCCAGGACCTTGGATCAGG+GGG | - | chr6_1:6066337-6066356 | Msa0871160:intron | 60.0% | |
| AACCCCCTGATCCAAGGTCC+TGG | + | chr6_1:6066342-6066361 | None:intergenic | 60.0% | |
| GGCAGAGCCACATTGTGGTG+AGG | + | chr6_1:6067244-6067263 | None:intergenic | 60.0% | |
| CCGTCAAACTGAAGCGGGCC+TGG | + | chr6_1:6060113-6060132 | None:intergenic | 65.0% | |
| CCGCTTCAGTTTGACGGCCC+TGG | - | chr6_1:6060116-6060135 | Msa0871160:intron | 65.0% | |
| AGTTTGACGGCCCTGGACCC+TGG | - | chr6_1:6060123-6060142 | Msa0871160:intron | 65.0% | |
| AGCGATCCGCCTTAGTCCGG+AGG | + | chr6_1:6062186-6062205 | None:intergenic | 65.0% | |
| GGACTAAGGCGGATCGCTGC+AGG | - | chr6_1:6062188-6062207 | Msa0871160:intron | 65.0% | |
| CAAGGTCCTGGCAACGCCAC+TGG | + | chr6_1:6066330-6066349 | None:intergenic | 65.0% | |
| CAGTGGCGTTGCCAGGACCT+TGG | - | chr6_1:6066328-6066347 | Msa0871160:intron | 65.0% | |
| TGCCACTGAGTGGCGCCCTT+CGG | - | chr6_1:6067260-6067279 | Msa0871160:intron | 65.0% | |
| !! | AACCGAAGGGCGCCACTCAG+TGG | + | chr6_1:6067265-6067284 | None:intergenic | 65.0% |
| AGCCACGGGAGTGGCGCCAG+TGG | - | chr6_1:6066311-6066330 | Msa0871160:CDS | 75.0% | |
| GTGGCGCCAGTGGCGTTGCC+AGG | - | chr6_1:6066321-6066340 | Msa0871160:intron | 75.0% | |
| ! | CGCCACTGGCGCCACTCCCG+TGG | + | chr6_1:6066316-6066335 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 6059372 | 6067787 | 6059372 | ID=Msa0871160;Name=Msa0871160 |
| chr6_1 | mRNA | 6059372 | 6067787 | 6059372 | ID=Msa0871160-mRNA-1;Parent=Msa0871160;Name=Msa0871160-mRNA-1;_AED=0.24;_eAED=0.47;_QI=86|0|0|0.87|0.28|0.37|8|0|254 |
| chr6_1 | exon | 6067780 | 6067787 | 6067780 | ID=Msa0871160-mRNA-1:exon:1826;Parent=Msa0871160-mRNA-1 |
| chr6_1 | exon | 6067275 | 6067518 | 6067275 | ID=Msa0871160-mRNA-1:exon:1825;Parent=Msa0871160-mRNA-1 |
| chr6_1 | exon | 6067137 | 6067241 | 6067137 | ID=Msa0871160-mRNA-1:exon:1824;Parent=Msa0871160-mRNA-1 |
| chr6_1 | exon | 6066998 | 6067101 | 6066998 | ID=Msa0871160-mRNA-1:exon:1823;Parent=Msa0871160-mRNA-1 |
| chr6_1 | exon | 6066202 | 6066336 | 6066202 | ID=Msa0871160-mRNA-1:exon:1822;Parent=Msa0871160-mRNA-1 |
| chr6_1 | exon | 6065939 | 6066079 | 6065939 | ID=Msa0871160-mRNA-1:exon:1821;Parent=Msa0871160-mRNA-1 |
| chr6_1 | exon | 6065250 | 6065316 | 6065250 | ID=Msa0871160-mRNA-1:exon:1820;Parent=Msa0871160-mRNA-1 |
| chr6_1 | exon | 6059372 | 6059415 | 6059372 | ID=Msa0871160-mRNA-1:exon:1819;Parent=Msa0871160-mRNA-1 |
| chr6_1 | five_prime_UTR | 6067780 | 6067787 | 6067780 | ID=Msa0871160-mRNA-1:five_prime_utr;Parent=Msa0871160-mRNA-1 |
| chr6_1 | five_prime_UTR | 6067441 | 6067518 | 6067441 | ID=Msa0871160-mRNA-1:five_prime_utr;Parent=Msa0871160-mRNA-1 |
| chr6_1 | CDS | 6067275 | 6067440 | 6067275 | ID=Msa0871160-mRNA-1:cds;Parent=Msa0871160-mRNA-1 |
| chr6_1 | CDS | 6067137 | 6067241 | 6067137 | ID=Msa0871160-mRNA-1:cds;Parent=Msa0871160-mRNA-1 |
| chr6_1 | CDS | 6066998 | 6067101 | 6066998 | ID=Msa0871160-mRNA-1:cds;Parent=Msa0871160-mRNA-1 |
| chr6_1 | CDS | 6066202 | 6066336 | 6066202 | ID=Msa0871160-mRNA-1:cds;Parent=Msa0871160-mRNA-1 |
| chr6_1 | CDS | 6065939 | 6066079 | 6065939 | ID=Msa0871160-mRNA-1:cds;Parent=Msa0871160-mRNA-1 |
| chr6_1 | CDS | 6065250 | 6065316 | 6065250 | ID=Msa0871160-mRNA-1:cds;Parent=Msa0871160-mRNA-1 |
| chr6_1 | CDS | 6059372 | 6059415 | 6059372 | ID=Msa0871160-mRNA-1:cds;Parent=Msa0871160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
