AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0871830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0871830 MtrunA17_Chr6g0453131 96.429 392 10 2 1 389 1 391 0.0 783
Msa0871830 MtrunA17_Chr8g0361731 51.232 406 170 14 1 389 1 395 1.19e-121 357
Msa0871830 MtrunA17_Chr5g0417001 47.733 419 161 18 1 389 1 391 2.90e-111 331
Msa0871830 MtrunA17_Chr2g0311651 45.357 280 126 9 1 268 3 267 1.32e-68 219
Msa0871830 MtrunA17_Chr5g0442771 56.983 179 65 3 7 174 1 178 4.18e-67 215
Msa0871830 MtrunA17_Chr2g0311661 45.725 269 116 10 1 256 3 254 3.07e-66 212
Msa0871830 MtrunA17_Chr4g0047841 51.323 189 70 5 15 185 15 199 1.15e-59 197
Msa0871830 MtrunA17_Chr2g0318101 53.293 167 74 4 14 177 14 179 1.79e-59 196
Msa0871830 MtrunA17_Chr7g0252971 54.706 170 63 5 14 175 7 170 6.26e-58 192
Msa0871830 MtrunA17_Chr4g0076731 53.374 163 64 3 13 175 52 202 1.15e-57 194
Msa0871830 MtrunA17_Chr2g0309891 54.321 162 64 4 15 175 6 158 2.66e-55 185
Msa0871830 MtrunA17_Chr2g0326361 49.162 179 84 3 17 194 16 188 1.32e-54 183
Msa0871830 MtrunA17_Chr5g0417791 49.714 175 81 4 14 188 2 169 2.71e-54 180
Msa0871830 MtrunA17_Chr5g0398971 44.615 195 96 2 9 201 1 185 4.84e-54 182
Msa0871830 MtrunA17_Chr8g0384721 50.877 171 64 4 14 178 6 162 7.79e-54 179
Msa0871830 MtrunA17_Chr3g0124761 49.162 179 76 4 15 187 7 176 9.03e-54 179
Msa0871830 MtrunA17_Chr3g0130731 51.205 166 72 3 14 179 6 162 8.67e-53 177
Msa0871830 MtrunA17_Chr4g0042561 50.282 177 81 4 7 183 1 170 1.32e-52 176
Msa0871830 MtrunA17_Chr2g0318081 52.147 163 67 3 15 177 16 167 1.60e-52 178
Msa0871830 MtrunA17_Chr6g0481091 49.412 170 75 3 15 183 6 165 2.26e-52 174
Msa0871830 MtrunA17_Chr5g0405211 46.286 175 80 4 17 189 10 172 2.95e-52 177
Msa0871830 MtrunA17_Chr7g0263931 51.205 166 70 4 15 177 11 168 7.74e-52 176
Msa0871830 MtrunA17_Chr4g0018391 47.619 168 74 4 9 174 1 156 1.16e-51 176
Msa0871830 MtrunA17_Chr3g0109821 50.000 166 73 3 15 179 6 162 1.84e-51 182
Msa0871830 MtrunA17_Chr8g0359921 52.147 163 69 3 15 177 14 167 4.46e-51 174
Msa0871830 MtrunA17_Chr8g0372121 46.341 164 74 4 17 178 8 159 8.21e-51 172
Msa0871830 MtrunA17_Chr4g0056541 45.198 177 81 4 9 183 1 163 1.24e-50 174
Msa0871830 MtrunA17_Chr5g0433781 49.697 165 72 3 15 178 6 160 1.88e-50 179
Msa0871830 MtrunA17_Chr4g0060931 49.390 164 74 3 14 177 16 170 2.70e-50 172
Msa0871830 MtrunA17_Chr2g0309331 45.029 171 81 3 17 185 12 171 2.76e-50 172
Msa0871830 MtrunA17_Chr4g0038751 48.087 183 77 6 16 195 16 183 3.62e-50 171
Msa0871830 MtrunA17_Chr5g0400461 49.102 167 66 4 15 174 6 160 2.95e-49 169
Msa0871830 MtrunA17_Chr4g0017921 50.000 162 66 4 17 176 10 158 3.63e-49 169
Msa0871830 MtrunA17_Chr2g0316971 51.807 166 67 4 15 177 23 178 4.11e-49 170
Msa0871830 MtrunA17_Chr8g0346001 42.703 185 99 4 1 181 1 182 5.70e-49 171
Msa0871830 MtrunA17_Chr3g0091921 47.594 187 84 5 15 201 16 188 7.74e-49 167
Msa0871830 MtrunA17_Chr6g0461661 47.514 181 81 6 1 176 1 172 3.21e-48 167
Msa0871830 MtrunA17_Chr6g0453451 51.235 162 70 4 14 175 19 171 3.82e-48 166
Msa0871830 MtrunA17_Chr6g0484441 42.254 213 102 5 13 217 3 202 1.20e-47 165
Msa0871830 MtrunA17_Chr7g0253011 47.977 173 77 4 14 182 16 179 1.45e-47 166
Msa0871830 MtrunA17_Chr1g0200561 45.198 177 80 5 17 191 21 182 1.84e-47 165
Msa0871830 MtrunA17_Chr3g0139331 49.112 169 71 4 11 177 7 162 9.17e-47 163
Msa0871830 MtrunA17_Chr3g0130101 46.584 161 75 4 15 174 7 157 1.82e-45 160
Msa0871830 MtrunA17_Chr4g0054791 49.080 163 71 3 15 174 6 159 2.17e-45 159
Msa0871830 MtrunA17_Chr2g0312321 49.697 165 71 5 15 179 11 163 2.45e-45 158
Msa0871830 MtrunA17_Chr7g0214071 46.067 178 80 4 1 177 1 163 5.95e-45 155
Msa0871830 MtrunA17_Chr1g0201021 57.364 129 51 3 16 142 20 146 7.23e-45 162
Msa0871830 MtrunA17_Chr7g0217721 47.879 165 78 5 18 176 22 184 2.22e-44 157
Msa0871830 MtrunA17_Chr5g0428991 45.402 174 84 3 2 174 12 175 3.82e-44 161
Msa0871830 MtrunA17_Chr8g0364791 45.342 161 77 4 15 174 6 156 8.90e-44 157
Msa0871830 MtrunA17_Chr1g0197351 47.239 163 81 3 15 176 42 200 2.89e-43 157
Msa0871830 MtrunA17_Chr1g0147421 44.199 181 81 6 2 175 10 177 4.25e-43 154
Msa0871830 MtrunA17_Chr7g0217711 53.435 131 59 2 18 148 22 150 2.79e-42 146
Msa0871830 MtrunA17_Chr8g0385991 44.785 163 82 3 10 171 9 164 7.22e-42 146
Msa0871830 MtrunA17_Chr8g0384201 43.478 161 80 4 15 174 6 156 1.10e-41 152
Msa0871830 MtrunA17_Chr1g0183741 36.596 235 128 7 15 248 10 224 3.23e-41 146
Msa0871830 MtrunA17_Chr3g0128151 43.275 171 86 3 7 176 14 174 3.92e-41 153
Msa0871830 MtrunA17_Chr3g0144271 53.077 130 58 3 15 142 23 151 2.83e-40 147
Msa0871830 MtrunA17_Chr3g0128111 42.593 162 78 5 18 176 45 194 4.13e-40 142
Msa0871830 MtrunA17_Chr7g0261411 43.396 159 75 4 15 172 10 154 9.30e-39 140
Msa0871830 MtrunA17_Chr4g0026141 36.444 225 118 6 13 232 3 207 9.65e-39 139
Msa0871830 MtrunA17_Chr1g0197361 40.223 179 92 6 17 192 10 176 8.38e-38 143
Msa0871830 MtrunA17_Chr3g0131911 41.573 178 95 4 3 177 2 173 1.59e-37 135
Msa0871830 MtrunA17_Chr2g0321631 34.483 232 133 8 12 231 1 225 1.78e-37 135
Msa0871830 MtrunA17_Chr3g0092671 42.945 163 80 5 17 177 7 158 5.59e-37 140
Msa0871830 MtrunA17_Chr7g0266701 37.791 172 98 4 12 178 1 168 8.40e-36 131
Msa0871830 MtrunA17_Chr8g0345671 48.905 137 66 4 14 147 10 145 4.77e-35 133
Msa0871830 MtrunA17_Chr8g0345691 46.617 133 67 4 12 141 9 140 1.25e-31 124
Msa0871830 MtrunA17_Chr8g0345711 38.323 167 96 6 12 172 8 173 2.44e-30 114
Msa0871830 MtrunA17_Chr2g0321741 31.579 247 143 9 35 279 12 234 5.59e-28 112
Msa0871830 MtrunA17_Chr3g0113001 45.217 115 52 3 64 176 13 118 9.54e-28 111
Msa0871830 MtrunA17_Chr8g0345731 44.444 135 67 7 14 141 22 155 6.46e-27 105
Msa0871830 MtrunA17_Chr8g0345721 34.857 175 81 4 18 160 38 211 3.70e-25 101
Msa0871830 MtrunA17_Chr4g0050701 36.646 161 89 5 15 174 11 159 3.33e-24 98.6
Msa0871830 MtrunA17_Chr8g0345741 41.600 125 69 4 26 147 2 125 1.25e-23 95.9
Msa0871830 MtrunA17_Chr8g0345701 38.194 144 68 7 16 141 7 147 1.06e-19 85.9
Msa0871830 MtrunA17_Chr8g0384351 34.132 167 75 8 15 179 10 143 6.64e-19 84.0
Msa0871830 MtrunA17_Chr3g0113031 41.584 101 47 3 79 176 3 94 1.07e-18 85.1
Msa0871830 MtrunA17_Chr7g0251651 34.109 129 81 3 18 145 21 146 1.47e-18 83.2
Msa0871830 MtrunA17_Chr7g0243371 43.750 80 44 1 64 142 12 91 1.06e-17 78.6
Msa0871830 MtrunA17_Chr7g0251671 34.074 135 81 4 14 145 9 138 1.18e-17 79.7
Msa0871830 MtrunA17_Chr7g0251661 33.333 135 86 3 14 147 9 140 1.52e-17 79.3
Msa0871830 MtrunA17_Chr3g0130321 31.056 161 102 4 15 173 7 160 3.53e-17 79.7
Msa0871830 MtrunA17_Chr1g0194791 61.702 47 17 1 17 62 48 94 7.08e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0871830 AT1G26870.1 50.000 356 163 9 1 347 1 350 3.15e-97 296
Msa0871830 AT5G39820.1 64.706 204 56 6 1 190 5 206 8.01e-91 277
Msa0871830 AT2G43000.1 61.728 162 52 3 16 177 19 170 9.13e-71 223
Msa0871830 AT3G15510.1 49.246 199 91 6 19 210 21 216 8.12e-59 195
Msa0871830 AT3G12910.1 56.805 169 64 4 16 177 22 188 1.38e-58 193
Msa0871830 AT2G02450.2 53.750 160 62 3 15 174 51 198 6.42e-58 194
Msa0871830 AT2G02450.1 53.750 160 62 3 15 174 51 198 7.77e-58 193
Msa0871830 AT1G61110.1 53.614 166 73 3 15 177 16 180 1.09e-57 191
Msa0871830 AT3G04070.2 54.237 177 71 5 15 185 10 182 1.97e-57 191
Msa0871830 AT3G04070.1 49.223 193 72 5 15 185 10 198 8.92e-55 185
Msa0871830 AT4G27410.2 53.988 163 64 3 15 177 14 165 1.14e-54 182
Msa0871830 AT1G69490.1 49.714 175 81 4 7 181 1 168 7.45e-54 179
Msa0871830 AT3G17730.1 51.479 169 71 3 15 182 6 164 9.22e-54 179
Msa0871830 AT5G08790.1 51.515 165 73 3 14 178 6 163 3.39e-53 178
Msa0871830 AT5G17260.1 52.795 161 66 4 15 174 6 157 4.59e-53 183
Msa0871830 AT1G01720.1 53.988 163 67 4 15 177 7 161 6.82e-53 177
Msa0871830 AT3G15500.1 52.326 172 71 3 6 177 5 165 7.42e-53 178
Msa0871830 AT1G52890.1 51.705 176 69 4 7 177 1 165 1.46e-52 177
Msa0871830 AT3G03200.1 52.174 161 67 4 15 174 6 157 1.76e-52 182
Msa0871830 AT1G65910.1 51.875 160 66 3 17 175 8 157 4.69e-52 184
Msa0871830 AT5G63790.1 50.909 165 74 3 14 178 49 206 5.09e-52 176
Msa0871830 AT5G63790.2 50.909 165 74 3 14 178 59 216 5.09e-52 176
Msa0871830 AT4G27410.3 49.162 179 65 3 15 177 14 182 7.79e-52 176
Msa0871830 AT2G17040.1 49.133 173 71 4 13 183 4 161 8.31e-52 174
Msa0871830 AT4G36160.1 40.359 223 114 6 17 232 12 222 9.32e-52 177
Msa0871830 AT4G36160.3 40.359 223 114 6 17 232 12 222 9.32e-52 177
Msa0871830 AT4G36160.2 40.359 223 114 6 17 232 16 226 1.00e-51 177
Msa0871830 AT5G61430.1 50.617 162 71 3 14 175 15 167 1.06e-51 176
Msa0871830 AT2G18060.3 48.750 160 68 4 17 174 11 158 2.35e-51 176
Msa0871830 AT2G18060.1 48.750 160 68 4 17 174 11 158 2.35e-51 176
Msa0871830 AT1G12260.2 48.521 169 71 5 9 174 1 156 2.95e-51 175
Msa0871830 AT3G04060.1 50.000 164 74 2 11 174 16 171 4.16e-51 174
Msa0871830 AT4G10350.1 48.837 172 76 3 17 186 11 172 4.39e-51 174
Msa0871830 AT1G12260.1 48.521 169 71 5 9 174 1 156 4.50e-51 176
Msa0871830 AT1G77450.1 50.617 162 71 3 17 178 12 164 4.84e-51 172
Msa0871830 AT5G62380.2 49.689 161 65 5 17 174 9 156 6.41e-51 174
Msa0871830 AT5G62380.1 49.689 161 65 5 17 174 9 156 6.41e-51 174
Msa0871830 AT5G18270.1 48.521 169 79 2 14 182 20 180 7.91e-51 174
Msa0871830 AT5G39610.1 42.523 214 108 5 14 224 19 220 2.19e-50 171
Msa0871830 AT5G07680.2 50.000 162 72 3 14 175 2 154 2.19e-50 172
Msa0871830 AT4G17980.1 51.235 162 70 3 15 174 6 160 2.37e-50 170
Msa0871830 AT5G07680.1 50.000 162 72 3 14 175 16 168 2.41e-50 172
Msa0871830 AT5G18270.2 47.929 169 80 2 14 182 20 180 3.10e-50 172
Msa0871830 AT4G17980.2 51.235 162 70 3 15 174 6 160 3.31e-50 171
Msa0871830 AT1G76420.1 48.187 193 80 6 2 193 15 188 3.97e-50 172
Msa0871830 AT5G66300.1 45.402 174 82 4 17 188 14 176 8.15e-50 170
Msa0871830 AT1G52880.1 52.381 168 67 4 19 179 21 182 1.77e-49 170
Msa0871830 AT3G18400.1 49.102 167 69 4 13 177 3 155 2.08e-49 169
Msa0871830 AT1G62700.1 47.929 169 72 5 9 174 1 156 5.75e-49 170
Msa0871830 AT1G62700.2 47.929 169 72 5 9 174 1 156 5.75e-49 170
Msa0871830 AT1G33280.1 51.235 162 64 4 17 176 10 158 1.15e-48 167
Msa0871830 AT1G56010.2 49.714 175 78 6 2 174 5 171 1.62e-48 167
Msa0871830 AT1G54330.1 51.553 161 64 4 15 174 6 153 1.65e-48 167
Msa0871830 AT2G46770.1 40.609 197 100 5 1 188 2 190 1.04e-47 166
Msa0871830 AT3G15170.1 45.631 206 98 5 17 219 22 216 1.30e-47 164
Msa0871830 AT2G24430.2 47.590 166 75 3 13 177 14 168 2.06e-47 164
Msa0871830 AT2G24430.1 47.590 166 75 3 13 177 14 168 2.06e-47 164
Msa0871830 AT1G32770.1 43.258 178 97 3 2 176 3 179 6.14e-47 164
Msa0871830 AT5G46590.1 48.447 161 74 3 15 174 6 158 8.30e-47 162
Msa0871830 AT5G46590.2 53.676 136 61 2 15 149 6 140 1.36e-46 161
Msa0871830 AT5G53950.1 52.439 164 65 4 15 175 17 170 1.69e-46 163
Msa0871830 AT3G10500.1 47.674 172 79 3 7 177 1 162 1.81e-46 167
Msa0871830 AT1G71930.2 43.158 190 85 7 12 193 1 175 2.30e-46 162
Msa0871830 AT1G71930.1 43.158 190 85 7 12 193 1 175 2.30e-46 162
Msa0871830 AT1G79580.3 45.732 164 75 3 17 178 19 170 3.92e-46 162
Msa0871830 AT1G79580.5 45.732 164 75 3 17 178 19 170 3.92e-46 162
Msa0871830 AT1G79580.4 45.732 164 75 3 17 178 19 170 3.92e-46 162
Msa0871830 AT1G79580.2 45.732 164 75 3 17 178 19 170 3.92e-46 162
Msa0871830 AT1G79580.1 45.732 164 75 3 17 178 19 170 3.92e-46 162
Msa0871830 AT3G12977.1 40.969 227 118 7 3 224 5 220 7.84e-46 159
Msa0871830 AT3G29035.1 57.364 129 53 2 14 142 23 149 8.05e-46 160
Msa0871830 AT1G32510.1 39.912 228 107 8 15 235 6 210 1.33e-45 158
Msa0871830 AT5G13180.1 47.929 169 73 3 10 177 9 163 1.60e-45 157
Msa0871830 AT3G10490.1 46.626 163 77 3 15 176 27 180 1.65e-45 157
Msa0871830 AT3G10480.2 47.239 163 75 3 15 176 27 179 1.66e-45 162
Msa0871830 AT5G04410.1 43.316 187 95 4 7 192 1 177 4.12e-45 164
Msa0871830 AT3G10480.1 46.951 164 75 4 15 176 27 180 7.66e-45 160
Msa0871830 AT3G61910.1 41.477 176 96 4 7 176 3 177 1.32e-44 157
Msa0871830 AT3G10490.2 46.626 163 77 3 15 176 27 180 6.86e-44 158
Msa0871830 AT1G34190.1 47.239 163 73 5 17 177 18 169 1.17e-43 159
Msa0871830 AT5G24590.2 44.253 174 87 2 4 176 2 166 1.27e-43 157
Msa0871830 AT2G33480.1 44.633 177 84 4 1 177 1 163 1.01e-42 150
Msa0871830 AT5G09330.5 44.242 165 73 4 15 174 6 156 2.97e-42 154
Msa0871830 AT5G09330.2 44.242 165 73 4 15 174 6 156 2.97e-42 154
Msa0871830 AT5G09330.4 44.242 165 73 4 15 174 6 156 2.97e-42 154
Msa0871830 AT5G09330.3 44.242 165 73 4 15 174 6 156 2.97e-42 154
Msa0871830 AT5G09330.1 44.242 165 73 4 15 174 6 156 2.97e-42 154
Msa0871830 AT2G27300.1 40.909 176 86 4 1 176 1 158 3.04e-42 151
Msa0871830 AT1G34180.3 54.331 127 56 2 17 142 18 143 6.37e-42 153
Msa0871830 AT4G35580.3 45.882 170 79 5 7 174 1 159 9.20e-42 154
Msa0871830 AT4G35580.2 45.882 170 79 5 7 174 1 159 1.03e-41 154
Msa0871830 AT4G35580.1 45.882 170 79 5 7 174 1 159 1.15e-41 153
Msa0871830 AT3G49530.2 43.195 169 86 3 7 174 5 164 1.64e-41 151
Msa0871830 AT1G34180.1 54.331 127 56 2 17 142 18 143 2.47e-41 153
Msa0871830 AT1G33060.2 43.103 174 88 3 2 174 11 174 2.59e-41 154
Msa0871830 AT1G33060.1 43.103 174 88 3 2 174 11 174 2.82e-41 154
Msa0871830 AT3G49530.1 43.195 169 86 3 7 174 5 164 3.58e-41 151
Msa0871830 AT2G33480.2 44.633 177 82 5 1 177 1 161 4.40e-41 146
Msa0871830 AT3G10480.3 39.594 197 74 4 15 176 27 213 5.72e-41 152
Msa0871830 AT1G34180.4 49.640 139 56 2 17 142 18 155 4.29e-40 148
Msa0871830 AT5G64060.1 42.593 162 82 4 14 174 5 156 4.46e-40 146
Msa0871830 AT1G34180.2 49.640 139 56 2 17 142 18 155 1.43e-39 149
Msa0871830 AT4G28530.1 42.623 183 74 6 15 180 10 178 3.43e-39 143
Msa0871830 AT5G22290.1 40.764 157 77 3 15 171 21 161 1.34e-38 141
Msa0871830 AT3G44290.2 39.394 165 83 2 12 176 11 158 6.64e-38 136
Msa0871830 AT3G44290.1 39.634 164 82 2 12 175 11 157 2.60e-37 138
Msa0871830 AT5G04395.1 42.236 161 77 5 15 160 28 187 1.10e-34 127
Msa0871830 AT1G32870.2 43.503 177 89 5 15 190 10 176 4.78e-34 132
Msa0871830 AT1G32870.1 43.503 177 89 5 15 190 10 176 5.22e-34 132
Msa0871830 AT1G32870.3 42.105 190 98 6 3 190 33 212 6.46e-34 132
Msa0871830 AT2G43000.2 58.000 100 33 2 78 177 2 92 3.43e-33 123
Msa0871830 AT5G61430.2 50.000 112 48 2 64 175 1 104 8.39e-33 124
Msa0871830 AT3G12977.2 40.000 165 87 3 63 224 12 167 1.38e-31 120
Msa0871830 AT1G56010.1 51.351 111 47 3 64 174 1 104 2.22e-31 120
Msa0871830 AT4G10350.2 46.774 124 56 2 63 186 12 125 1.26e-30 119
Msa0871830 AT3G44350.2 34.911 169 98 3 13 177 3 163 1.38e-30 117
Msa0871830 AT5G22380.1 36.416 173 94 6 12 177 2 165 2.81e-30 116
Msa0871830 AT3G44350.1 36.552 145 88 2 13 153 3 147 5.71e-29 110
Msa0871830 AT4G01550.1 43.478 138 73 4 12 145 2 138 6.29e-28 114
Msa0871830 AT5G64530.1 39.645 169 83 6 15 177 3 158 2.86e-26 104
Msa0871830 AT5G64530.2 42.748 131 61 4 14 143 2 119 6.46e-26 102
Msa0871830 AT4G01520.1 42.537 134 70 5 18 145 7 139 7.33e-26 106
Msa0871830 AT4G01540.3 42.537 134 70 5 18 145 7 139 4.90e-25 106
Msa0871830 AT4G01540.4 42.537 134 70 5 18 145 7 139 5.85e-25 105
Msa0871830 AT4G01540.1 42.537 134 70 5 18 145 7 139 7.37e-25 106
Msa0871830 AT4G01540.2 42.537 134 70 5 18 145 7 139 8.36e-25 105
Msa0871830 AT4G28530.2 45.370 108 42 3 15 106 10 116 8.22e-21 92.4
Msa0871830 AT1G02230.1 39.850 133 72 4 18 145 6 135 8.86e-21 93.2
Msa0871830 AT2G33480.3 42.202 109 53 3 69 177 8 106 9.14e-21 90.1
Msa0871830 AT2G18060.2 51.852 81 27 3 94 174 2 70 1.36e-20 91.3
Msa0871830 AT1G02250.1 40.310 129 69 5 18 141 6 131 2.68e-20 91.7
Msa0871830 AT1G01010.1 29.921 254 144 8 18 257 6 239 4.27e-20 92.0
Msa0871830 AT3G04420.2 38.095 126 74 3 18 140 6 130 5.92e-20 89.7
Msa0871830 AT3G04420.1 38.095 126 74 3 18 140 6 130 2.03e-19 89.0
Msa0871830 AT3G04430.1 37.879 132 70 3 21 141 6 136 1.67e-18 83.6
Msa0871830 AT3G55210.1 30.220 182 94 6 15 180 11 175 1.58e-17 82.4
Msa0871830 AT5G14000.2 31.126 151 98 3 1 149 1 147 6.63e-17 77.8
Msa0871830 AT5G14000.1 27.568 185 116 4 1 183 1 169 1.47e-16 78.2
Msa0871830 AT1G02220.1 38.095 126 71 4 18 140 6 127 2.09e-16 80.5
Msa0871830 AT3G56530.1 32.353 136 89 2 17 150 54 188 6.68e-16 78.2
Msa0871830 AT3G10490.4 40.909 88 43 2 89 176 2 80 7.49e-15 75.5
Msa0871830 AT3G10490.3 40.909 88 43 2 89 176 2 80 7.49e-15 75.5
Msa0871830 AT5G50820.1 32.331 133 74 5 15 142 17 138 1.33e-13 69.3
Msa0871830 AT5G22290.2 40.260 77 30 3 95 171 2 62 1.14e-11 64.7

Find 72 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACCATGCTTCCTGGTAAT+TGG 0.131450 6_1:-7026641 None:intergenic
AACAGGAATTTGTGAGGATT+TGG 0.247261 6_1:-7027143 None:intergenic
CTTTCCAACACAAACTATAT+TGG 0.265576 6_1:+7027253 Msa0871830:CDS
GAGTTACAAGAGCTGGATTT+TGG 0.268455 6_1:+7025844 Msa0871830:CDS
GAAGTCACTTGTCTTCTATA+AGG 0.296503 6_1:+7025926 Msa0871830:CDS
CTTCAAGTGTGTAGAACATT+AGG 0.306455 6_1:-7027189 None:intergenic
CCAGCTCTTGTAACTCTATT+AGG 0.312453 6_1:-7025837 None:intergenic
GTGTTGATAGGTTTGTAATT+TGG 0.358014 6_1:-7027115 None:intergenic
GATGCAAATAATCAATATAA+TGG 0.359002 6_1:+7027283 Msa0871830:CDS
TTTCCATCTGATGAGTATAT+AGG 0.364565 6_1:-7025888 None:intergenic
TCACAAATTCCTGTTCCTAA+TGG 0.378078 6_1:+7027151 Msa0871830:CDS
AACCATGCTTCCTGGTAATT+GGG 0.382863 6_1:-7026640 None:intergenic
ACTTGCTTAATAAGTTCAAT+AGG 0.383211 6_1:-7025177 None:intergenic
CCCACAGATGAAGAGCTTGT+TGG 0.384548 6_1:+7025117 Msa0871830:CDS
ATTGGATGATGCATGAGTTT+AGG 0.393794 6_1:+7025976 Msa0871830:CDS
AATTCATTAACCATGCTTCC+TGG 0.399214 6_1:-7026648 None:intergenic
TGAGAAATTGTTGATGGTAT+TGG 0.405211 6_1:-7027080 None:intergenic
TTGTACCATTGAAAGGGAAT+TGG 0.407959 6_1:-7026592 None:intergenic
CTTAATCAATGGGAAAATCT+TGG 0.415172 6_1:+7027370 Msa0871830:CDS
TCTTGAATATTCACAATGTT+TGG 0.417304 6_1:-7027337 None:intergenic
AAGGTTGATGATTTGATGCC+TGG 0.423727 6_1:+7025081 Msa0871830:CDS
GAAAACCAATTCCCTTTCAA+TGG 0.426808 6_1:+7026587 Msa0871830:CDS
GTCCTCAAAGCATCAAAACT+TGG 0.429523 6_1:-7027424 None:intergenic
GGAAGGCAACTGGAACTGAT+AGG 0.433013 6_1:+7025865 Msa0871830:CDS
CTTTGAGGACTAGTGTTACA+TGG 0.434518 6_1:+7027437 Msa0871830:CDS
ATCAAATGCAGCTTAATCAA+TGG 0.439366 6_1:+7027359 Msa0871830:CDS
GATTTGGAAATTGTGTTGAT+AGG 0.450117 6_1:-7027127 None:intergenic
TGAGCACTCTGTGGAACCAT+TGG 0.460798 6_1:-7027212 None:intergenic
AAGTCACTTGTCTTCTATAA+GGG 0.469878 6_1:+7025927 Msa0871830:CDS
TCAAATGCAGCTTAATCAAT+GGG 0.472008 6_1:+7027360 Msa0871830:CDS
AAAACCAATATAGTTTGTGT+TGG 0.476473 6_1:-7027257 None:intergenic
CCTAATAGAGTTACAAGAGC+TGG 0.479097 6_1:+7025837 Msa0871830:CDS
ATAATGTCTCCATTAGGAAC+AGG 0.480950 6_1:-7027160 None:intergenic
TTATCAATAATGTCTCCATT+AGG 0.481250 6_1:-7027166 None:intergenic
AAACTTGGAGACAAATTGAA+TGG 0.481553 6_1:-7027409 None:intergenic
TATAAGAATTCTTACTTGGA+AGG 0.484332 6_1:-7025227 None:intergenic
TTCTTACTTGGAAGGTCCCA+TGG 0.492827 6_1:-7025219 None:intergenic
GTGGGATGAAAGCGAAATCC+AGG 0.492997 6_1:-7025099 None:intergenic
CCAAAGGGATGAAAACTGAT+TGG 0.497200 6_1:+7025958 Msa0871830:CDS
TTTACTAGTGACATAGGTTG+TGG 0.499478 6_1:-7027488 None:intergenic
TGAAGCTGAGAAATTGTTGA+TGG 0.511201 6_1:-7027086 None:intergenic
GTAACATTTACTAGTGACAT+AGG 0.511602 6_1:-7027494 None:intergenic
ACCAACAAGCTCTTCATCTG+TGG 0.517278 6_1:-7025118 None:intergenic
TATTGAACTTATTAAGCAAG+TGG 0.518925 6_1:+7025179 Msa0871830:CDS
TCATCAGATGGAAAATGCAT+TGG 0.527545 6_1:+7025897 Msa0871830:CDS
CCTTGGATCTCCCAATTACC+AGG 0.531026 6_1:+7026630 Msa0871830:CDS
AGGATTCATGGGCAATCTGT+AGG 0.535758 6_1:+7026556 Msa0871830:intron
AATGGTATTTCTATTGTCCA+AGG 0.545816 6_1:+7025787 Msa0871830:CDS
ATGTTTGGTTGCATATCTTG+AGG 0.549489 6_1:-7027322 None:intergenic
CATGGAGGAAAGAACTGAGA+TGG 0.553122 6_1:+7025050 None:intergenic
ATATTTACAAACATGATCCA+TGG 0.555585 6_1:+7025202 Msa0871830:CDS
CTGGTAATTGGGAGATCCAA+GGG 0.570203 6_1:-7026629 None:intergenic
CTCCCAATTACCAGGAAGCA+TGG 0.571720 6_1:+7026638 Msa0871830:CDS
TATTTACAAACATGATCCAT+GGG 0.576790 6_1:+7025203 Msa0871830:CDS
CCTGGTAATTGGGAGATCCA+AGG 0.578599 6_1:-7026630 None:intergenic
TTCTACACACTTGAAGCCAA+TGG 0.578960 6_1:+7027196 Msa0871830:CDS
AGGCCTATATACTCATCAGA+TGG 0.580727 6_1:+7025885 Msa0871830:CDS
CAAGAAGAGCTAGCAAGTAG+TGG 0.581972 6_1:+7025756 Msa0871830:intron
CCAACAAGCTCTTCATCTGT+GGG 0.588377 6_1:-7025117 None:intergenic
ACAGAACAAGGATCATCAGC+AGG 0.588648 6_1:+7026732 Msa0871830:CDS
GTGGACATTTCACTAGTGCA+AGG 0.608685 6_1:-7027469 None:intergenic
ATAAGGGTAGAGCTGCCAAA+GGG 0.609579 6_1:+7025943 Msa0871830:CDS
ATGGTATTTCTATTGTCCAA+GGG 0.621463 6_1:+7025788 Msa0871830:CDS
CACTAGTAAATGTTACACTT+AGG 0.626341 6_1:+7027501 Msa0871830:CDS
TCATGCACAACAACAGAACA+AGG 0.629885 6_1:+7026720 Msa0871830:CDS
ATTAGGAACAGGAATTTGTG+AGG 0.633156 6_1:-7027149 None:intergenic
AACTGAGATGGATATTAACA+AGG 0.642088 6_1:+7025062 Msa0871830:CDS
GAGTTTGAATCTGAAATGCA+CGG 0.647715 6_1:-7026002 None:intergenic
TTTGAGGACTAGTGTTACAT+GGG 0.649862 6_1:+7027438 Msa0871830:CDS
ATCATCAATTGAGCACTCTG+TGG 0.660207 6_1:-7027221 None:intergenic
TATAAGGGTAGAGCTGCCAA+AGG 0.669349 6_1:+7025942 Msa0871830:CDS
GACATTTCACTAGTGCAAGG+TGG 0.776490 6_1:-7027466 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATGAATAAAAAATTTGTA+GGG - chr6_1:7025411-7025430 None:intergenic 10.0%
!!! TTTTATGTTTTCAATTTAAT+TGG - chr6_1:7025683-7025702 None:intergenic 10.0%
!! TATATTAAATAGTAAAAATG+AGG - chr6_1:7026098-7026117 None:intergenic 10.0%
!! AATATTAGAAAAAGGAAAAT+GGG - chr6_1:7025299-7025318 None:intergenic 15.0%
!! TAATATTAGAAAAAGGAAAA+TGG - chr6_1:7025300-7025319 None:intergenic 15.0%
!! GGTAAAATAATATTAGAAAA+AGG - chr6_1:7025307-7025326 None:intergenic 15.0%
!!! CACACAATTTTAAATATTAA+AGG + chr6_1:7025338-7025357 Msa0871830:intron 15.0%
!! CTAATGAATAAAAAATTTGT+AGG - chr6_1:7025412-7025431 None:intergenic 15.0%
!!! TTTTAATTAATTTCTTTGCA+AGG + chr6_1:7025464-7025483 Msa0871830:intron 15.0%
!! ATAAAAGATGAAGATTAAAA+TGG + chr6_1:7025512-7025531 Msa0871830:intron 15.0%
!!! AAAATGAAGTTAACATTTTT+TGG - chr6_1:7025725-7025744 None:intergenic 15.0%
!! ATAACTAAAATACTTACATT+TGG - chr6_1:7026062-7026081 None:intergenic 15.0%
!!! GTTTTCAATAATATTTTTTC+AGG + chr6_1:7026783-7026802 Msa0871830:intron 15.0%
!!! AACTTTAACACTATTTTATT+AGG - chr6_1:7026940-7026959 None:intergenic 15.0%
!! TTGTTATAAGAATTCTTACT+TGG - chr6_1:7025234-7025253 None:intergenic 20.0%
!!! ATTATTTTCTTCAGTTAAAC+AGG - chr6_1:7025365-7025384 None:intergenic 20.0%
!! TGGTAAATAAGATAGAATAT+AGG - chr6_1:7025663-7025682 None:intergenic 20.0%
!!! CTTTTATCTGAAAACTTTTT+AGG - chr6_1:7026032-7026051 None:intergenic 20.0%
!!! AACATTGTTAAGTTTTGTTT+TGG + chr6_1:7026445-7026464 Msa0871830:intron 20.0%
!! AGAAAAATGTAAAAATGAAG+AGG - chr6_1:7026483-7026502 None:intergenic 20.0%
!!! ATAACTGATTAGTTTAGTAT+AGG - chr6_1:7026524-7026543 None:intergenic 20.0%
!!! TCAGTTATTTATGAATTTTC+AGG + chr6_1:7026536-7026555 Msa0871830:intron 20.0%
!!! TATTATTTTCTGAACAGAAT+TGG - chr6_1:7026698-7026717 None:intergenic 20.0%
!! GATGCAAATAATCAATATAA+TGG + chr6_1:7027283-7027302 Msa0871830:CDS 20.0%
! ACTTGCTTAATAAGTTCAAT+AGG - chr6_1:7025180-7025199 None:intergenic 25.0%
! TATTGAACTTATTAAGCAAG+TGG + chr6_1:7025179-7025198 Msa0871830:CDS 25.0%
! ATATTTACAAACATGATCCA+TGG + chr6_1:7025202-7025221 Msa0871830:CDS 25.0%
! TATTTACAAACATGATCCAT+GGG + chr6_1:7025203-7025222 Msa0871830:CDS 25.0%
! TATAAGAATTCTTACTTGGA+AGG - chr6_1:7025230-7025249 None:intergenic 25.0%
!! TGGATAAGAAAATGATGTTT+TGG + chr6_1:7025532-7025551 Msa0871830:intron 25.0%
!!! TTATCTGAAAACTTTTTAGG+AGG - chr6_1:7026029-7026048 None:intergenic 25.0%
! ATGTAAAAATGAAGAGGAAT+TGG - chr6_1:7026477-7026496 None:intergenic 25.0%
!!! TTATGAATTTTCAGGATTCA+TGG + chr6_1:7026544-7026563 Msa0871830:intron 25.0%
!!! TATGAATTTTCAGGATTCAT+GGG + chr6_1:7026545-7026564 Msa0871830:intron 25.0%
! AAACATACAAATGTAAGTGT+TGG + chr6_1:7026758-7026777 Msa0871830:intron 25.0%
! TTATTAGGCAAAATTCATGT+AGG - chr6_1:7026925-7026944 None:intergenic 25.0%
! AAATTGAATGGACAATTGTT+AGG - chr6_1:7027029-7027048 None:intergenic 25.0%
! TTATCAATAATGTCTCCATT+AGG - chr6_1:7027169-7027188 None:intergenic 25.0%
!! AAAACCAATATAGTTTGTGT+TGG - chr6_1:7027260-7027279 None:intergenic 25.0%
! TCTTGAATATTCACAATGTT+TGG - chr6_1:7027340-7027359 None:intergenic 25.0%
AACTGAGATGGATATTAACA+AGG + chr6_1:7025062-7025081 Msa0871830:CDS 30.0%
! TTTGCTGAATTTTTCTCTTG+AGG - chr6_1:7025149-7025168 None:intergenic 30.0%
AAATTGTGTGTTCAATCTCT+AGG - chr6_1:7025328-7025347 None:intergenic 30.0%
! AATGGTATTTCTATTGTCCA+AGG + chr6_1:7025787-7025806 Msa0871830:CDS 30.0%
! ATGGTATTTCTATTGTCCAA+GGG + chr6_1:7025788-7025807 Msa0871830:CDS 30.0%
! TTTCTATATTTTCTGTCCCT+TGG - chr6_1:7025807-7025826 None:intergenic 30.0%
TTTCCATCTGATGAGTATAT+AGG - chr6_1:7025891-7025910 None:intergenic 30.0%
AAGTCACTTGTCTTCTATAA+GGG + chr6_1:7025927-7025946 Msa0871830:CDS 30.0%
TAAGCAAAAAATAGAGTGCA+TGG - chr6_1:7026325-7026344 None:intergenic 30.0%
!! TGCTTTTTGTACCATTGAAA+GGG - chr6_1:7026601-7026620 None:intergenic 30.0%
!! ATGCTTTTTGTACCATTGAA+AGG - chr6_1:7026602-7026621 None:intergenic 30.0%
AATATGAGAAATGACTCATG+TGG + chr6_1:7026859-7026878 Msa0871830:intron 30.0%
CTTGTTGCTACAAAATTGAA+TGG - chr6_1:7027041-7027060 None:intergenic 30.0%
!! TGAGAAATTGTTGATGGTAT+TGG - chr6_1:7027083-7027102 None:intergenic 30.0%
! GTGTTGATAGGTTTGTAATT+TGG - chr6_1:7027118-7027137 None:intergenic 30.0%
! GATTTGGAAATTGTGTTGAT+AGG - chr6_1:7027130-7027149 None:intergenic 30.0%
CTTTCCAACACAAACTATAT+TGG + chr6_1:7027253-7027272 Msa0871830:CDS 30.0%
ATCAAATGCAGCTTAATCAA+TGG + chr6_1:7027359-7027378 Msa0871830:CDS 30.0%
TCAAATGCAGCTTAATCAAT+GGG + chr6_1:7027360-7027379 Msa0871830:CDS 30.0%
CTTAATCAATGGGAAAATCT+TGG + chr6_1:7027370-7027389 Msa0871830:CDS 30.0%
AAACTTGGAGACAAATTGAA+TGG - chr6_1:7027412-7027431 None:intergenic 30.0%
GTAACATTTACTAGTGACAT+AGG - chr6_1:7027497-7027516 None:intergenic 30.0%
CAAGTAGTGGTGAAAAAGAA+TGG + chr6_1:7025769-7025788 Msa0871830:CDS 35.0%
TCATCAGATGGAAAATGCAT+TGG + chr6_1:7025897-7025916 Msa0871830:CDS 35.0%
GAAGTCACTTGTCTTCTATA+AGG + chr6_1:7025926-7025945 Msa0871830:CDS 35.0%
ATTGGATGATGCATGAGTTT+AGG + chr6_1:7025976-7025995 Msa0871830:CDS 35.0%
! GAGTTTGAATCTGAAATGCA+CGG - chr6_1:7026005-7026024 None:intergenic 35.0%
CAAATGATAGACGATGGTTT+GGG + chr6_1:7026258-7026277 Msa0871830:intron 35.0%
AAATGATAGACGATGGTTTG+GGG + chr6_1:7026259-7026278 Msa0871830:intron 35.0%
AAAAGACATCTCAACTAGGT+TGG - chr6_1:7026288-7026307 None:intergenic 35.0%
ACAGAAAAGACATCTCAACT+AGG - chr6_1:7026292-7026311 None:intergenic 35.0%
! AGTTGAGATGTCTTTTCTGT+AGG + chr6_1:7026292-7026311 Msa0871830:intron 35.0%
!! ATGTCTTTTCTGTAGGTTGA+TGG + chr6_1:7026299-7026318 Msa0871830:intron 35.0%
GAAAACCAATTCCCTTTCAA+TGG + chr6_1:7026587-7026606 Msa0871830:CDS 35.0%
TTGTACCATTGAAAGGGAAT+TGG - chr6_1:7026595-7026614 None:intergenic 35.0%
AATTCATTAACCATGCTTCC+TGG - chr6_1:7026651-7026670 None:intergenic 35.0%
!! CATACAAATGTAAGTGTTGG+AGG + chr6_1:7026761-7026780 Msa0871830:intron 35.0%
! ATGTGGGTCCATTTTCAAAA+TGG - chr6_1:7026890-7026909 None:intergenic 35.0%
AATGGACCCACATAAAATTG+TGG + chr6_1:7026897-7026916 Msa0871830:intron 35.0%
ATGGACCCACATAAAATTGT+GGG + chr6_1:7026898-7026917 Msa0871830:intron 35.0%
! TAGGTCCCACAATTTTATGT+GGG - chr6_1:7026906-7026925 None:intergenic 35.0%
CGAATCCATTAATGTAGTGA+GGG - chr6_1:7027004-7027023 None:intergenic 35.0%
TGAAGCTGAGAAATTGTTGA+TGG - chr6_1:7027089-7027108 None:intergenic 35.0%
AACAGGAATTTGTGAGGATT+TGG - chr6_1:7027146-7027165 None:intergenic 35.0%
ATTAGGAACAGGAATTTGTG+AGG - chr6_1:7027152-7027171 None:intergenic 35.0%
TCACAAATTCCTGTTCCTAA+TGG + chr6_1:7027151-7027170 Msa0871830:CDS 35.0%
ATAATGTCTCCATTAGGAAC+AGG - chr6_1:7027163-7027182 None:intergenic 35.0%
CTTCAAGTGTGTAGAACATT+AGG - chr6_1:7027192-7027211 None:intergenic 35.0%
ATGTTTGGTTGCATATCTTG+AGG - chr6_1:7027325-7027344 None:intergenic 35.0%
! TTTGAGGACTAGTGTTACAT+GGG + chr6_1:7027438-7027457 Msa0871830:CDS 35.0%
TTTACTAGTGACATAGGTTG+TGG - chr6_1:7027491-7027510 None:intergenic 35.0%
!! AAGGTTGATGATTTGATGCC+TGG + chr6_1:7025081-7025100 Msa0871830:CDS 40.0%
CCAGCTCTTGTAACTCTATT+AGG - chr6_1:7025840-7025859 None:intergenic 40.0%
CCTAATAGAGTTACAAGAGC+TGG + chr6_1:7025837-7025856 Msa0871830:CDS 40.0%
! GAGTTACAAGAGCTGGATTT+TGG + chr6_1:7025844-7025863 Msa0871830:CDS 40.0%
! TACAAGAGCTGGATTTTGGA+AGG + chr6_1:7025848-7025867 Msa0871830:CDS 40.0%
AGGCCTATATACTCATCAGA+TGG + chr6_1:7025885-7025904 Msa0871830:CDS 40.0%
! CCAATCAGTTTTCATCCCTT+TGG - chr6_1:7025961-7025980 None:intergenic 40.0%
CCAAAGGGATGAAAACTGAT+TGG + chr6_1:7025958-7025977 Msa0871830:CDS 40.0%
GCAAATGATAGACGATGGTT+TGG + chr6_1:7026257-7026276 Msa0871830:intron 40.0%
!! AAAAAGCATTGTCTCACCCT+TGG + chr6_1:7026613-7026632 Msa0871830:CDS 40.0%
AACCATGCTTCCTGGTAATT+GGG - chr6_1:7026643-7026662 None:intergenic 40.0%
TAACCATGCTTCCTGGTAAT+TGG - chr6_1:7026644-7026663 None:intergenic 40.0%
TCATGCACAACAACAGAACA+AGG + chr6_1:7026720-7026739 Msa0871830:CDS 40.0%
!! TGGTTCCGCCATTTTGAAAA+TGG + chr6_1:7026879-7026898 Msa0871830:intron 40.0%
! TGGGTCCATTTTCAAAATGG+CGG - chr6_1:7026887-7026906 None:intergenic 40.0%
! GTAGGTCCCACAATTTTATG+TGG - chr6_1:7026907-7026926 None:intergenic 40.0%
TGTTGCCCTCACTACATTAA+TGG + chr6_1:7026996-7027015 Msa0871830:intron 40.0%
GCGAATCCATTAATGTAGTG+AGG - chr6_1:7027005-7027024 None:intergenic 40.0%
TTCTACACACTTGAAGCCAA+TGG + chr6_1:7027196-7027215 Msa0871830:CDS 40.0%
ATCATCAATTGAGCACTCTG+TGG - chr6_1:7027224-7027243 None:intergenic 40.0%
!! CTCCAAGTTTTGATGCTTTG+AGG + chr6_1:7027422-7027441 Msa0871830:CDS 40.0%
! GTCCTCAAAGCATCAAAACT+TGG - chr6_1:7027427-7027446 None:intergenic 40.0%
! CTTTGAGGACTAGTGTTACA+TGG + chr6_1:7027437-7027456 Msa0871830:CDS 40.0%
CCAACAAGCTCTTCATCTGT+GGG - chr6_1:7025120-7025139 None:intergenic 45.0%
ACCAACAAGCTCTTCATCTG+TGG - chr6_1:7025121-7025140 None:intergenic 45.0%
TTCTTACTTGGAAGGTCCCA+TGG - chr6_1:7025222-7025241 None:intergenic 45.0%
CAAGAAGAGCTAGCAAGTAG+TGG + chr6_1:7025756-7025775 Msa0871830:intron 45.0%
TATAAGGGTAGAGCTGCCAA+AGG + chr6_1:7025942-7025961 Msa0871830:CDS 45.0%
ATAAGGGTAGAGCTGCCAAA+GGG + chr6_1:7025943-7025962 Msa0871830:CDS 45.0%
GTGCTGCAAATGATAGACGA+TGG + chr6_1:7026252-7026271 Msa0871830:intron 45.0%
AGGATTCATGGGCAATCTGT+AGG + chr6_1:7026556-7026575 Msa0871830:intron 45.0%
CTGGTAATTGGGAGATCCAA+GGG - chr6_1:7026632-7026651 None:intergenic 45.0%
ACAGAACAAGGATCATCAGC+AGG + chr6_1:7026732-7026751 Msa0871830:CDS 45.0%
GACATTTCACTAGTGCAAGG+TGG - chr6_1:7027469-7027488 None:intergenic 45.0%
GTGGACATTTCACTAGTGCA+AGG - chr6_1:7027472-7027491 None:intergenic 45.0%
!!! TTTTATAAAAAGATATATAT+GGG - chr6_1:7025435-7025454 None:intergenic 5.0%
!!! TTTTTATAAAAAGATATATA+TGG - chr6_1:7025436-7025455 None:intergenic 5.0%
!!! TATATCTTTTTATAAAAATA+TGG + chr6_1:7025438-7025457 Msa0871830:intron 5.0%
!!! TATCTATAAATTTTATTAAA+TGG - chr6_1:7026179-7026198 None:intergenic 5.0%
GTGGGATGAAAGCGAAATCC+AGG - chr6_1:7025102-7025121 None:intergenic 50.0%
CCCACAGATGAAGAGCTTGT+TGG + chr6_1:7025117-7025136 Msa0871830:CDS 50.0%
!! GCTGGATTTTGGAAGGCAAC+TGG + chr6_1:7025855-7025874 Msa0871830:CDS 50.0%
GGAAGGCAACTGGAACTGAT+AGG + chr6_1:7025865-7025884 Msa0871830:CDS 50.0%
CCTGGTAATTGGGAGATCCA+AGG - chr6_1:7026633-7026652 None:intergenic 50.0%
CCTTGGATCTCCCAATTACC+AGG + chr6_1:7026630-7026649 Msa0871830:CDS 50.0%
CTCCCAATTACCAGGAAGCA+TGG + chr6_1:7026638-7026657 Msa0871830:CDS 50.0%
TGAGCACTCTGTGGAACCAT+TGG - chr6_1:7027215-7027234 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 7025051 7027522 7025051 ID=Msa0871830;Name=Msa0871830
chr6_1 mRNA 7025051 7027522 7025051 ID=Msa0871830-mRNA-1;Parent=Msa0871830;Name=Msa0871830-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|4|0|389
chr6_1 exon 7025051 7025234 7025051 ID=Msa0871830-mRNA-1:exon:2146;Parent=Msa0871830-mRNA-1
chr6_1 exon 7025760 7026064 7025760 ID=Msa0871830-mRNA-1:exon:2147;Parent=Msa0871830-mRNA-1
chr6_1 exon 7026558 7026769 7026558 ID=Msa0871830-mRNA-1:exon:2148;Parent=Msa0871830-mRNA-1
chr6_1 exon 7027054 7027522 7027054 ID=Msa0871830-mRNA-1:exon:2149;Parent=Msa0871830-mRNA-1
chr6_1 CDS 7025051 7025234 7025051 ID=Msa0871830-mRNA-1:cds;Parent=Msa0871830-mRNA-1
chr6_1 CDS 7025760 7026064 7025760 ID=Msa0871830-mRNA-1:cds;Parent=Msa0871830-mRNA-1
chr6_1 CDS 7026558 7026769 7026558 ID=Msa0871830-mRNA-1:cds;Parent=Msa0871830-mRNA-1
chr6_1 CDS 7027054 7027522 7027054 ID=Msa0871830-mRNA-1:cds;Parent=Msa0871830-mRNA-1
Gene Sequence

>Msa0871830

ATGGAGGAAAGAACTGAGATGGATATTAACAAGGTTGATGATTTGATGCCTGGATTTCGCTTTCATCCCACAGATGAAGAGCTTGTTGGTTTTTACCTCAAGAGAAAAATTCAGCAAAAATCTCTTCCTATTGAACTTATTAAGCAAGTGGATATTTACAAACATGATCCATGGGACCTTCCAAAAGAGCTAGCAAGTAGTGGTGAAAAAGAATGGTATTTCTATTGTCCAAGGGACAGAAAATATAGAAACAGTTCAAGACCTAATAGAGTTACAAGAGCTGGATTTTGGAAGGCAACTGGAACTGATAGGCCTATATACTCATCAGATGGAAAATGCATTGGTTTGAAGAAGTCACTTGTCTTCTATAAGGGTAGAGCTGCCAAAGGGATGAAAACTGATTGGATGATGCATGAGTTTAGGTTACCGTGCATTTCAGATTCAAACTCTCCTCCTAAAAAGTTTTCAGATAAAAGTTTCTCTCCAAATGATTCATGGGCAATCTGTAGGATCTTCAAGAAAACCAATTCCCTTTCAATGGTACAAAAAGCATTGTCTCACCCTTGGATCTCCCAATTACCAGGAAGCATGGTTAATGAATTACTCACACAAACTACAAACATCAACCAATTCTGTTCAGAAAATAATATCTCATGCACAACAACAGAACAAGGATCATCAGCAGGAACAAACATACAAATCAACAAGCATGAGCTACAACAAGTCTCCAATACCATCAACAATTTCTCAGCTTCAGATTTTCCAAATTACAAACCTATCAACACAATTTCCAAATCCTCACAAATTCCTGTTCCTAATGGAGACATTATTGATAACCTAATGTTCTACACACTTGAAGCCAATGGTTCCACAGAGTGCTCAATTGATGATAGTTCAATTCTTTCCAACACAAACTATATTGGTTTTGAAGATGCAAATAATCAATATAATGGCTTCTCAATTAGTTTACCTCAAGATATGCAACCAAACATTGTGAATATTCAAGATCAAATGCAGCTTAATCAATGGGAAAATCTTGGAAGAACAATTGAATTTCCATTCAATTTGTCTCCAAGTTTTGATGCTTTGAGGACTAGTGTTACATGGGACTCACCACCTTGCACTAGTGAAATGTCCACAACCTATGTCACTAGTAAATGTTACACTTAG
Protein sequence

>Msa0871830

MEERTEMDINKVDDLMPGFRFHPTDEELVGFYLKRKIQQKSLPIELIKQVDIYKHDPWDLPKELASSGEKEWYFYCPRDRKYRNSSRPNRVTRAGFWKATGTDRPIYSSDGKCIGLKKSLVFYKGRAAKGMKTDWMMHEFRLPCISDSNSPPKKFSDKSFSPNDSWAICRIFKKTNSLSMVQKALSHPWISQLPGSMVNELLTQTTNINQFCSENNISCTTTEQGSSAGTNIQINKHELQQVSNTINNFSASDFPNYKPINTISKSSQIPVPNGDIIDNLMFYTLEANGSTECSIDDSSILSNTNYIGFEDANNQYNGFSISLPQDMQPNIVNIQDQMQLNQWENLGRTIEFPFNLSPSFDALRTSVTWDSPPCTSEMSTTYVTSKCYT*