AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0878390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0878390 MtrunA17_Chr6g0460951 95.946 222 4 2 1 217 1 222 1.30e-150 425
Msa0878390 MtrunA17_Chr6g0460951 53.171 205 60 3 220 404 39 227 2.59e-62 200
Msa0878390 MtrunA17_Chr6g0460931 90.654 107 9 1 299 404 1 107 3.31e-53 172
Msa0878390 MtrunA17_Chr6g0460931 50.000 102 33 3 133 217 2 102 5.32e-14 67.8
Msa0878390 MtrunA17_Chr6g0460941 83.951 81 13 0 215 295 1 81 1.02e-43 147
Msa0878390 MtrunA17_Chr6g0460941 64.773 88 28 1 40 124 7 94 5.48e-35 124
Msa0878390 MtrunA17_Chr1g0184271 45.745 188 84 5 40 215 12 193 1.54e-42 149
Msa0878390 MtrunA17_Chr1g0184271 58.108 74 31 0 221 294 12 85 5.60e-26 104
Msa0878390 MtrunA17_Chr7g0260971 66.019 103 32 1 39 138 13 115 7.01e-41 144
Msa0878390 MtrunA17_Chr7g0260971 56.627 83 36 0 212 294 5 87 6.30e-26 104
Msa0878390 MtrunA17_Chr7g0261031 62.963 108 37 1 39 143 7 114 7.86e-41 144
Msa0878390 MtrunA17_Chr7g0261031 57.500 80 34 0 215 294 2 81 5.13e-27 107
Msa0878390 MtrunA17_Chr8g0351701 63.725 102 34 1 40 138 23 124 1.62e-39 141
Msa0878390 MtrunA17_Chr8g0351701 62.162 74 28 0 221 294 23 96 9.10e-27 107
Msa0878390 MtrunA17_Chr5g0435641 51.261 119 55 1 39 154 6 124 1.21e-38 137
Msa0878390 MtrunA17_Chr5g0435641 52.500 80 38 0 215 294 1 80 8.96e-24 97.8
Msa0878390 MtrunA17_Chr1g0184281 62.376 101 35 1 40 137 15 115 2.09e-38 137
Msa0878390 MtrunA17_Chr1g0184281 55.405 74 33 0 221 294 15 88 5.84e-24 98.6
Msa0878390 MtrunA17_Chr7g0245871 59.804 102 38 1 40 138 27 128 6.83e-38 137
Msa0878390 MtrunA17_Chr7g0245871 59.459 74 30 0 221 294 27 100 2.54e-25 103
Msa0878390 MtrunA17_Chr8g0351721 57.983 119 46 2 40 154 18 136 8.34e-38 136
Msa0878390 MtrunA17_Chr8g0351721 59.459 74 30 0 221 294 18 91 1.49e-24 100
Msa0878390 MtrunA17_Chr7g0245861 64.444 90 27 3 40 124 12 101 1.04e-29 112
Msa0878390 MtrunA17_Chr7g0245861 57.895 76 30 2 221 294 12 87 1.69e-22 92.8
Msa0878390 MtrunA17_Chr3g0114061 36.875 160 82 4 39 191 7 154 3.58e-29 111
Msa0878390 MtrunA17_Chr3g0114061 48.684 76 38 1 219 294 6 80 5.87e-21 89.0
Msa0878390 MtrunA17_Chr4g0043421 36.943 157 83 4 39 188 14 161 4.22e-29 111
Msa0878390 MtrunA17_Chr4g0043421 36.301 146 84 3 219 356 13 157 4.18e-23 95.5
Msa0878390 MtrunA17_Chr4g0058651 49.074 108 53 1 39 144 10 117 4.99e-29 112
Msa0878390 MtrunA17_Chr4g0058651 50.667 75 36 1 220 294 10 83 8.42e-22 92.0
Msa0878390 MtrunA17_Chr2g0311601 44.954 109 56 2 38 143 11 118 9.82e-29 110
Msa0878390 MtrunA17_Chr2g0311601 48.000 75 38 1 220 294 12 85 1.95e-20 87.4
Msa0878390 MtrunA17_Chr3g0129071 48.214 112 54 2 38 146 45 155 2.85e-28 111
Msa0878390 MtrunA17_Chr3g0129071 39.815 108 59 3 220 323 46 151 2.31e-17 80.9
Msa0878390 MtrunA17_Chr3g0117121 48.624 109 52 2 39 145 9 115 6.24e-28 108
Msa0878390 MtrunA17_Chr3g0117121 44.565 92 46 2 216 303 5 95 3.94e-21 90.5
Msa0878390 MtrunA17_Chr3g0106101 47.115 104 51 2 39 139 6 108 6.81e-28 108
Msa0878390 MtrunA17_Chr3g0106101 45.000 80 43 1 215 294 1 79 1.25e-20 88.6
Msa0878390 MtrunA17_Chr6g0449641 45.690 116 57 3 39 151 8 120 6.93e-28 107
Msa0878390 MtrunA17_Chr6g0449641 43.478 92 47 2 216 303 4 94 4.63e-21 89.0
Msa0878390 MtrunA17_Chr7g0227511 49.038 104 49 2 39 139 10 112 9.55e-28 107
Msa0878390 MtrunA17_Chr7g0227511 44.211 95 48 2 213 303 3 96 1.44e-21 90.9
Msa0878390 MtrunA17_Chr5g0437401 47.000 100 51 1 41 138 12 111 9.55e-28 108
Msa0878390 MtrunA17_Chr5g0437401 50.000 76 37 1 219 294 9 83 2.53e-20 87.8
Msa0878390 MtrunA17_Chr5g0438091 46.429 112 56 2 39 147 38 148 2.86e-27 107
Msa0878390 MtrunA17_Chr5g0438091 37.956 137 73 4 199 325 11 145 1.78e-21 91.7
Msa0878390 MtrunA17_Chr5g0402611 50.000 102 49 1 39 138 7 108 1.25e-26 108
Msa0878390 MtrunA17_Chr5g0402611 38.514 148 70 6 216 344 3 148 5.74e-20 90.1
Msa0878390 MtrunA17_Chr4g0030001 42.222 135 66 5 37 161 21 153 1.41e-26 105
Msa0878390 MtrunA17_Chr4g0030001 39.796 98 57 2 198 294 1 97 2.26e-18 82.8
Msa0878390 MtrunA17_Chr5g0437571 45.631 103 54 1 39 139 5 107 1.73e-26 104
Msa0878390 MtrunA17_Chr5g0437571 35.606 132 67 4 220 339 5 130 8.09e-21 89.0
Msa0878390 MtrunA17_Chr3g0115431 47.059 102 52 1 39 138 8 109 1.39e-25 103
Msa0878390 MtrunA17_Chr3g0115431 50.000 76 37 1 219 294 7 81 4.73e-20 88.2
Msa0878390 MtrunA17_Chr6g0449651 43.103 116 60 3 39 151 66 178 3.78e-25 101
Msa0878390 MtrunA17_Chr6g0449651 40.659 91 49 2 217 303 63 152 4.31e-19 84.7
Msa0878390 MtrunA17_Chr3g0113891 44.211 95 51 1 41 133 15 109 5.17e-25 100
Msa0878390 MtrunA17_Chr3g0113891 44.944 89 44 2 219 303 12 99 5.81e-20 87.0
Msa0878390 MtrunA17_Chr3g0097221 43.966 116 60 2 39 152 6 118 1.30e-24 102
Msa0878390 MtrunA17_Chr3g0097221 47.500 80 41 1 215 294 1 79 2.43e-20 90.5
Msa0878390 MtrunA17_Chr1g0200201 43.363 113 62 2 41 151 73 185 3.41e-24 99.8
Msa0878390 MtrunA17_Chr1g0200201 42.466 73 41 1 222 294 73 144 3.27e-15 74.7
Msa0878390 MtrunA17_Chr5g0432451 50.000 108 50 2 38 142 41 147 1.11e-23 98.6
Msa0878390 MtrunA17_Chr5g0432451 50.667 75 36 1 220 294 42 115 2.18e-19 86.7
Msa0878390 MtrunA17_Chr5g0444351 42.857 105 58 1 41 143 6 110 7.78e-23 93.6
Msa0878390 MtrunA17_Chr5g0444351 37.815 119 64 4 222 332 6 122 1.13e-15 73.9
Msa0878390 MtrunA17_Chr8g0374601 38.235 136 76 3 37 168 23 154 4.58e-22 95.1
Msa0878390 MtrunA17_Chr8g0374601 45.946 74 39 1 221 294 26 98 1.58e-17 82.4
Msa0878390 MtrunA17_Chr8g0353981 54.878 82 33 2 39 117 6 86 1.38e-21 92.8
Msa0878390 MtrunA17_Chr8g0353981 45.000 80 43 1 215 294 1 79 1.65e-18 84.0
Msa0878390 MtrunA17_Chr7g0225111 38.532 109 65 1 37 143 2 110 3.84e-21 88.2
Msa0878390 MtrunA17_Chr7g0225111 39.726 73 43 1 222 294 6 77 5.37e-14 68.2
Msa0878390 MtrunA17_Chr8g0374591 38.318 107 64 1 34 138 2 108 9.28e-20 84.7
Msa0878390 MtrunA17_Chr8g0374591 48.000 75 38 1 221 295 8 81 7.38e-19 82.4
Msa0878390 MtrunA17_Chr8g0374581 39.815 108 62 2 35 139 3 110 3.04e-17 80.5
Msa0878390 MtrunA17_Chr8g0374581 41.096 73 41 2 221 292 8 79 1.33e-12 67.0
Msa0878390 MtrunA17_Chr4g0040831 44.595 74 40 1 222 295 16 88 9.12e-17 78.6
Msa0878390 MtrunA17_Chr4g0040831 33.333 105 63 3 41 139 16 119 2.19e-12 65.9
Msa0878390 MtrunA17_Chr4g0059901 38.000 100 60 1 41 138 11 110 5.88e-16 77.4
Msa0878390 MtrunA17_Chr4g0059901 34.884 86 51 2 222 303 11 95 2.78e-11 63.5
Msa0878390 MtrunA17_Chr2g0330201 35.000 100 63 1 41 138 20 119 9.87e-16 77.4
Msa0878390 MtrunA17_Chr2g0330201 31.507 73 49 1 222 294 20 91 1.81e-11 64.7
Msa0878390 MtrunA17_Chr8g0342351 36.000 100 62 1 41 138 13 112 5.20e-15 74.7
Msa0878390 MtrunA17_Chr8g0342351 29.464 112 59 3 222 325 13 112 6.76e-12 65.5
Msa0878390 MtrunA17_Chr4g0046201 42.105 76 43 1 220 295 5 79 7.28e-14 71.2
Msa0878390 MtrunA17_Chr6g0452671 34.000 100 64 1 41 138 12 111 1.34e-13 69.3
Msa0878390 MtrunA17_Chr6g0452671 29.703 101 67 2 219 316 9 108 9.36e-12 63.9
Msa0878390 MtrunA17_Chr6g0452691 37.255 102 59 3 41 138 10 110 5.18e-13 67.4
Msa0878390 MtrunA17_Chr6g0452691 31.293 147 77 6 222 352 10 148 1.87e-11 62.8
Msa0878390 MtrunA17_Chr6g0452661 32.727 110 64 4 37 138 3 110 1.99e-12 67.0
Msa0878390 MtrunA17_Chr4g0055441 41.250 80 44 2 41 117 3 82 2.01e-12 64.7
Msa0878390 MtrunA17_Chr2g0326051 36.000 100 56 2 83 176 5 102 7.84e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0878390 AT3G03760.1 67.347 147 42 2 39 182 50 193 1.43e-55 184
Msa0878390 AT3G03760.1 50.000 112 38 1 220 313 50 161 3.77e-30 117
Msa0878390 AT2G42430.1 49.438 178 56 5 39 182 14 191 4.04e-42 149
Msa0878390 AT2G42430.1 50.000 98 48 1 220 316 14 111 2.47e-26 106
Msa0878390 AT3G58190.1 60.169 118 43 2 40 154 11 127 1.01e-41 147
Msa0878390 AT3G58190.1 59.459 74 30 0 221 294 11 84 4.23e-26 105
Msa0878390 AT2G42440.1 56.881 109 44 1 39 144 6 114 2.20e-37 136
Msa0878390 AT2G42440.1 53.750 80 37 0 215 294 1 80 3.23e-25 103
Msa0878390 AT2G45420.1 62.500 104 36 1 43 143 40 143 3.79e-37 136
Msa0878390 AT2G45420.1 63.380 71 26 0 224 294 40 110 3.64e-24 100
Msa0878390 AT5G06080.1 50.806 124 56 2 39 159 6 127 9.65e-37 132
Msa0878390 AT5G06080.1 50.000 80 40 0 215 294 1 80 4.51e-22 92.8
Msa0878390 AT4G00220.1 59.615 104 39 1 43 143 20 123 1.14e-36 134
Msa0878390 AT4G00220.1 42.105 152 73 5 224 363 20 168 3.53e-23 97.4
Msa0878390 AT2G31310.1 54.717 106 45 1 39 141 6 111 1.61e-36 132
Msa0878390 AT2G31310.1 50.000 80 40 0 215 294 1 80 1.86e-24 99.8
Msa0878390 AT4G00210.1 60.784 102 37 1 40 138 11 112 3.52e-36 132
Msa0878390 AT4G00210.1 55.405 74 33 0 221 294 11 84 3.05e-23 97.4
Msa0878390 AT2G45410.1 48.299 147 57 5 43 184 19 151 6.20e-34 125
Msa0878390 AT2G45410.1 38.636 132 69 2 224 344 19 149 4.08e-23 96.3
Msa0878390 AT3G27650.1 50.476 105 48 2 39 140 38 141 5.47e-29 111
Msa0878390 AT3G27650.1 41.758 91 48 2 217 303 35 124 1.09e-20 88.6
Msa0878390 AT1G07900.1 44.538 119 60 3 37 151 30 146 2.82e-28 110
Msa0878390 AT1G07900.1 44.000 75 41 1 220 294 32 105 1.73e-18 83.2
Msa0878390 AT2G30340.2 43.939 132 61 4 38 166 51 172 4.12e-28 112
Msa0878390 AT2G30340.2 48.000 75 38 1 220 294 52 125 1.21e-16 79.7
Msa0878390 AT2G30340.1 43.939 132 61 4 38 166 50 171 4.50e-28 112
Msa0878390 AT2G30340.1 48.000 75 38 1 220 294 51 124 1.17e-16 80.1
Msa0878390 AT5G63090.4 40.764 157 78 5 39 185 10 161 7.75e-28 108
Msa0878390 AT5G63090.4 50.667 75 36 1 220 294 10 83 3.04e-21 90.9
Msa0878390 AT5G63090.3 40.764 157 78 5 39 185 10 161 7.75e-28 108
Msa0878390 AT5G63090.3 50.667 75 36 1 220 294 10 83 3.04e-21 90.9
Msa0878390 AT5G63090.2 40.764 157 78 5 39 185 10 161 7.75e-28 108
Msa0878390 AT5G63090.2 50.667 75 36 1 220 294 10 83 3.04e-21 90.9
Msa0878390 AT5G63090.1 40.764 157 78 5 39 185 10 161 7.75e-28 108
Msa0878390 AT5G63090.1 50.667 75 36 1 220 294 10 83 3.04e-21 90.9
Msa0878390 AT3G11090.1 45.545 101 53 1 41 139 12 112 2.17e-27 107
Msa0878390 AT3G11090.1 50.000 76 37 1 219 294 9 83 8.51e-22 92.0
Msa0878390 AT2G28500.1 46.847 111 53 3 37 143 52 160 4.07e-27 108
Msa0878390 AT2G28500.1 45.333 75 40 1 220 294 54 127 1.87e-18 84.3
Msa0878390 AT2G30130.1 44.355 124 63 3 36 156 4 124 6.42e-27 106
Msa0878390 AT2G30130.1 48.684 76 38 1 219 294 6 80 2.99e-20 88.2
Msa0878390 AT1G16530.1 44.954 109 55 3 38 142 12 119 6.88e-26 103
Msa0878390 AT1G16530.1 39.098 133 70 5 211 334 4 134 1.36e-21 91.3
Msa0878390 AT5G66870.1 41.096 146 73 4 39 181 6 141 7.52e-26 106
Msa0878390 AT5G66870.1 42.400 125 63 4 215 331 1 124 1.76e-22 97.4
Msa0878390 AT1G31320.1 45.794 107 56 1 39 143 12 118 5.33e-25 100
Msa0878390 AT1G31320.1 44.048 84 46 1 211 294 3 85 6.33e-21 89.7
Msa0878390 AT2G23660.2 43.269 104 57 1 39 140 4 107 1.83e-23 100
Msa0878390 AT2G23660.2 50.000 76 37 1 219 294 3 77 3.08e-20 90.9
Msa0878390 AT2G23660.3 43.269 104 57 1 39 140 4 107 1.83e-23 100
Msa0878390 AT2G23660.3 50.000 76 37 1 219 294 3 77 3.08e-20 90.9
Msa0878390 AT2G23660.1 43.269 104 57 1 39 140 4 107 1.83e-23 100
Msa0878390 AT2G23660.1 50.000 76 37 1 219 294 3 77 3.08e-20 90.9
Msa0878390 AT3G26660.1 43.519 108 50 3 41 138 6 112 4.61e-23 94.0
Msa0878390 AT3G26660.1 38.384 99 54 3 222 314 6 103 1.58e-18 81.3
Msa0878390 AT1G65620.1 50.485 103 47 2 39 138 8 109 4.94e-23 96.3
Msa0878390 AT1G65620.1 48.101 79 40 1 216 294 4 81 3.60e-19 85.5
Msa0878390 AT1G65620.4 50.485 103 47 2 39 138 8 109 4.94e-23 96.3
Msa0878390 AT1G65620.4 48.101 79 40 1 216 294 4 81 3.60e-19 85.5
Msa0878390 AT1G65620.3 50.485 103 47 2 39 138 8 109 4.94e-23 96.3
Msa0878390 AT1G65620.3 48.101 79 40 1 216 294 4 81 3.60e-19 85.5
Msa0878390 AT1G65620.5 50.485 103 47 2 39 138 8 109 4.94e-23 96.3
Msa0878390 AT1G65620.5 48.101 79 40 1 216 294 4 81 3.60e-19 85.5
Msa0878390 AT1G65620.2 50.485 103 47 2 39 138 8 109 4.94e-23 96.3
Msa0878390 AT1G65620.2 48.101 79 40 1 216 294 4 81 3.60e-19 85.5
Msa0878390 AT2G40470.2 48.718 117 56 2 38 151 18 133 5.30e-23 96.3
Msa0878390 AT2G40470.2 48.000 75 38 1 220 294 19 92 8.24e-19 84.3
Msa0878390 AT2G40470.1 48.718 117 56 2 38 151 43 158 5.44e-23 96.7
Msa0878390 AT2G40470.1 48.000 75 38 1 220 294 44 117 1.50e-18 84.3
Msa0878390 AT3G26620.1 43.519 108 50 3 41 138 6 112 6.18e-23 93.6
Msa0878390 AT3G26620.1 38.384 99 54 3 222 314 6 103 1.95e-18 81.3
Msa0878390 AT3G50510.1 34.965 143 80 4 214 355 5 135 1.81e-20 89.0
Msa0878390 AT3G50510.1 35.185 108 68 1 33 138 5 112 1.12e-18 84.0
Msa0878390 AT3G50510.2 34.965 143 80 4 214 355 5 135 1.81e-20 89.0
Msa0878390 AT3G50510.2 35.185 108 68 1 33 138 5 112 1.12e-18 84.0
Msa0878390 AT1G72980.1 40.000 110 61 3 39 144 12 120 2.63e-16 77.8
Msa0878390 AT1G72980.1 43.421 76 42 1 219 294 11 85 2.63e-15 75.1
Msa0878390 AT1G06280.1 43.836 73 40 1 222 294 25 96 3.27e-16 77.4
Msa0878390 AT3G13850.1 36.000 100 62 1 41 138 37 136 1.56e-15 76.6
Msa0878390 AT3G13850.1 33.784 74 48 1 222 295 37 109 1.36e-12 68.2
Msa0878390 AT5G35900.1 33.333 153 85 5 219 366 3 143 2.63e-13 68.9
Msa0878390 AT5G35900.1 32.353 102 67 1 39 138 4 105 2.95e-13 68.9
Msa0878390 AT3G47870.1 29.808 104 71 1 41 142 37 140 3.00e-11 64.7

Find 101 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTGAAACGGCGGCTGATA+TGG 0.243600 6_1:+19297887 None:intergenic
GCAGATGTGCACAAGGTCTT+TGG 0.280674 6_1:-19294293 Msa0878390:CDS
GTGGACACACAACCATTAAT+TGG 0.284098 6_1:+19294170 None:intergenic
AACAACTTCAACCCTGGTTT+TGG 0.286713 6_1:-19297779 Msa0878390:CDS
CCTTCTTGCTTTGCAGCAAC+AGG 0.312094 6_1:-19298276 Msa0878390:intron
AGGCTAGCTGATCCGGTTTA+TGG 0.318039 6_1:-19298311 Msa0878390:CDS
TTGTTGGTGGCAGCAAGAAC+AGG 0.345361 6_1:+19293665 None:intergenic
AAATAGTCGCCGCAGCTTCT+TGG 0.360630 6_1:+19298351 None:intergenic
AGGATGTCTGATCCAATTAA+TGG 0.360827 6_1:-19294182 Msa0878390:intron
CTCCAGGTTCTCTTATCATC+AGG 0.387227 6_1:-19293555 Msa0878390:CDS
GGTGGTGATGGTAGTAGTTC+GGG 0.392136 6_1:-19298617 Msa0878390:CDS
TGCATCTTTGCACCCTACTT+TGG 0.399115 6_1:-19298470 Msa0878390:CDS
TGAAGTTGTTCATGTTCATA+AGG 0.399289 6_1:+19293642 None:intergenic
TGAAGTTGTTCATGTTCATA+AGG 0.399289 6_1:+19297792 None:intergenic
TGCACAGAGGCATTGAAGTT+TGG 0.400635 6_1:+19293752 None:intergenic
GTCTGTGATGGCTGAGTCAC+AGG 0.403204 6_1:-19298639 None:intergenic
TGCATCTTTGCACCCTACTT+TGG 0.409327 6_1:-19294341 Msa0878390:CDS
TAGCCTAGCTTGAGCCTCAT+AGG 0.409914 6_1:+19298328 None:intergenic
CATCCTAGCCTGAGCCTCAT+AGG 0.413611 6_1:+19294199 None:intergenic
ATGGTAGTAGTTCGGGAAAC+AGG 0.414773 6_1:-19298610 Msa0878390:CDS
TGCACAGGTACATTGAAGTT+TGG 0.417807 6_1:+19297854 None:intergenic
GTTGAAACGGCGGCTGATAT+GGG 0.423151 6_1:+19297888 None:intergenic
TGCAAACTCAATTGATGAAT+AGG 0.424003 6_1:-19297946 Msa0878390:CDS
GCGGCTGTGCACAAGGTGTT+TGG 0.424834 6_1:-19298422 Msa0878390:intron
GGGTGGTGATGGTAGTAGTT+CGG 0.433902 6_1:-19298618 Msa0878390:CDS
TCAAGCTAGGCTAGCTGATC+CGG 0.442761 6_1:-19298318 Msa0878390:CDS
GCACCACACGGCGTAATAAC+CGG 0.444947 6_1:+19298527 None:intergenic
GTAGCATTTGCTGATGCTGC+AGG 0.445401 6_1:+19293780 None:intergenic
GTTCATGTTCATAAGGTTGT+TGG 0.448098 6_1:+19293649 None:intergenic
ATATCAGCCGCCGTTTCAAC+TGG 0.453062 6_1:-19297885 Msa0878390:intron
GCTGCAGGTCTGTGGTCTGA+AGG 0.454305 6_1:+19293795 None:intergenic
TTGGAATATGCTGGCTGCAC+AGG 0.466534 6_1:+19297839 None:intergenic
GACTATGACCTATGAGGCTC+AGG 0.468164 6_1:-19294207 Msa0878390:CDS
AGCTTCTTGGCGATGGCTAG+CGG 0.472401 6_1:+19298364 None:intergenic
GGCTCTAAGCTCTGTGATGA+AGG 0.484149 6_1:+19297737 None:intergenic
TTTCTCAAAACGAGACATCC+TGG 0.484547 6_1:+19297703 None:intergenic
GTTGTTCATGTTCATAAGGT+TGG 0.485083 6_1:+19297796 None:intergenic
GCTTCTTGGCGATGGCTAGC+GGG 0.492092 6_1:+19298365 None:intergenic
CCAAGGTGCGGCTAAGTTTG+CGG 0.493536 6_1:-19298441 Msa0878390:CDS
GTGGACACACAGCCATAAAC+CGG 0.494266 6_1:+19298299 None:intergenic
GATGGATTGTTGGAGTATGC+TGG 0.496824 6_1:+19293728 None:intergenic
AAGAGCAACACAAGATGAAC+CGG 0.506885 6_1:-19298546 Msa0878390:CDS
GGTTGCTGTACCAGTTGAAA+CGG 0.507203 6_1:+19297875 None:intergenic
GGTGGAAGCAGATGAGTTGT+TGG 0.513070 6_1:+19297820 None:intergenic
CCTGTTGCTGCAAAGCAAGA+AGG 0.518305 6_1:+19298276 None:intergenic
GCGGTGGTTAGTTGGAATAG+TGG 0.521356 6_1:+19294244 None:intergenic
AACATGAACAACTTCAACCC+TGG 0.523993 6_1:-19293635 Msa0878390:CDS
AACATGAACAACTTCAACCC+TGG 0.523993 6_1:-19297785 Msa0878390:CDS
GATGGAAGGAGATGGATTGT+TGG 0.524920 6_1:+19293718 None:intergenic
TCGCCGCAGCTTCTTGGCGA+TGG 0.528738 6_1:+19298357 None:intergenic
CTGCAGGTCTGTGGTCTGAA+GGG 0.529680 6_1:+19293796 None:intergenic
TTGCTGATGCTGCAGGTCTG+TGG 0.532868 6_1:+19293787 None:intergenic
TTGAAGAAGAAGTGTAGTAA+TGG 0.533156 6_1:-19294365 Msa0878390:CDS
GCGATGGCTAGCGGGAATGT+TGG 0.538496 6_1:+19298373 None:intergenic
GTTCATGTTCATAAGGTTGG+TGG 0.542354 6_1:+19297799 None:intergenic
CTGTTGCTGCAAAGCAAGAA+GGG 0.544374 6_1:+19298277 None:intergenic
CATGTTCATAAGGTTGTTGG+TGG 0.547943 6_1:+19293652 None:intergenic
CAGATAAATCGACACCGTGT+GGG 0.552619 6_1:-19294400 Msa0878390:CDS
ACCTTGGTCAGTACCAAAGT+AGG 0.553693 6_1:+19298457 None:intergenic
GCTGAGTCACAGGGTGGTGA+TGG 0.557362 6_1:-19298629 Msa0878390:CDS
AAACTCAATTGATGAATAGG+AGG 0.570071 6_1:-19297943 Msa0878390:CDS
TCCATTGTGAGACCAAAACC+AGG 0.571138 6_1:+19297767 None:intergenic
TCCCTGATGATAAGAGAACC+TGG 0.572844 6_1:+19293553 None:intergenic
TTCATGAGATCGTCGATGGA+AGG 0.572919 6_1:+19293704 None:intergenic
AGATCGTCGATGGAAGGAGA+TGG 0.576323 6_1:+19293710 None:intergenic
CCGCAAACTTAGCCGCACCT+TGG 0.577994 6_1:+19298441 None:intergenic
TAGCCATCGCCAAGAAGCTG+CGG 0.580074 6_1:-19298360 Msa0878390:CDS
CATGTTCATAAGGTTGGTGG+TGG 0.580499 6_1:+19297802 None:intergenic
CATGTTCATGAGATCGTCGA+TGG 0.583597 6_1:+19293700 None:intergenic
TCCATTGTGATATCAAAACC+AGG 0.586511 6_1:+19293617 None:intergenic
TTTCCTATGAGGCTCAAGCT+AGG 0.592261 6_1:-19298331 Msa0878390:CDS
TCCAGGTTCTCTTATCATCA+GGG 0.596198 6_1:-19293554 Msa0878390:CDS
TGCGGCGACTATTTCCTATG+AGG 0.598387 6_1:-19298342 Msa0878390:CDS
AGGCTCAAAGCTCTGTGATG+AGG 0.599212 6_1:+19293586 None:intergenic
GGACAAGAGCTTCGACACAT+TGG 0.599388 6_1:+19294265 None:intergenic
CCTTGGTCAGTACCAAAGTA+GGG 0.599955 6_1:+19298458 None:intergenic
AATGGAGACTATGACCTATG+AGG 0.602127 6_1:-19294213 Msa0878390:CDS
TGACCTATGAGGCTCAGGCT+AGG 0.602297 6_1:-19294202 Msa0878390:CDS
GATGAGTTGTTGGAATATGC+TGG 0.605347 6_1:+19297830 None:intergenic
TTGAAACGGCGGCTGATATG+GGG 0.606891 6_1:+19297889 None:intergenic
GCAGATAAATCGACACCGTG+TGG 0.608982 6_1:-19294401 Msa0878390:intron
CCCTACTTTGGTACTGACCA+AGG 0.613176 6_1:-19298458 Msa0878390:CDS
AAAGCTCAGCAGACGAACAA+CGG 0.614223 6_1:-19293836 Msa0878390:CDS
TGTTGGTGGCAGCAAGAACA+GGG 0.624562 6_1:+19293666 None:intergenic
TAGCTTTGCAGATGTGCACA+AGG 0.625800 6_1:-19294300 Msa0878390:CDS
TTGAGGAGGAAGTGTAGCAG+TGG 0.628185 6_1:-19298494 Msa0878390:CDS
GGTGGCAGCTATGCAAGCAG+AGG 0.634590 6_1:-19297978 Msa0878390:CDS
TCTGTGATGGCTGAGTCACA+GGG 0.634822 6_1:-19298638 None:intergenic
AGATAAATCGACACCGTGTG+GGG 0.638818 6_1:-19294399 Msa0878390:CDS
AAGTGCTTGCAAGCCCCACA+CGG 0.644781 6_1:+19294386 None:intergenic
GTGGTGCTTGCAAGTTCTTG+AGG 0.646814 6_1:-19298511 Msa0878390:CDS
CTTTGGTACTGACCAAGGTG+CGG 0.655594 6_1:-19298453 Msa0878390:CDS
TTGCTGCAAAGCAAGAAGGG+TGG 0.671870 6_1:+19298280 None:intergenic
GTGCTTGCAAGTTCTTGAGG+AGG 0.680170 6_1:-19298508 Msa0878390:CDS
TGCTGTACCAGTTGAAACGG+CGG 0.689555 6_1:+19297878 None:intergenic
AAGAACTTGCAAGCACCACA+CGG 0.689772 6_1:+19298515 None:intergenic
CCATTGTGATATCAAAACCA+GGG 0.693982 6_1:+19293618 None:intergenic
GTGATGGCTGAGTCACAGGG+TGG 0.720655 6_1:-19298635 Msa0878390:CDS
GAACCGGTTATTACGCCGTG+TGG 0.731502 6_1:-19298530 Msa0878390:CDS
CCATTGTGAGACCAAAACCA+GGG 0.733968 6_1:+19297768 None:intergenic
GGAGTATGCTGGTTGCACAG+AGG 0.785881 6_1:+19293739 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTATATTATTAATAA+AGG - chr6_1:19295613-19295632 Msa0878390:intron 0.0%
!! GTAATAAAAGAAAAAAAAAA+TGG + chr6_1:19294643-19294662 None:intergenic 10.0%
!! TATATGAAATGTAAAATATA+TGG - chr6_1:19294761-19294780 Msa0878390:intron 10.0%
!!! AATGAACTTTAATAATTTTT+AGG - chr6_1:19294832-19294851 Msa0878390:intron 10.0%
!! TTGTTTAAGTATATTATTTA+AGG + chr6_1:19295785-19295804 None:intergenic 10.0%
!! AATTAATTATAACTTGAATT+TGG + chr6_1:19297023-19297042 None:intergenic 10.0%
!!! CATTCTTTCTTTTAAATAAA+AGG + chr6_1:19293973-19293992 None:intergenic 15.0%
!! TTATTGATGAGAAAATTATT+AGG + chr6_1:19294043-19294062 None:intergenic 15.0%
!! GAAAAAAATGTATTTAGTAT+TGG - chr6_1:19295650-19295669 Msa0878390:intron 15.0%
!!! AGTATATTGGTTTTAAATTA+TGG + chr6_1:19295877-19295896 None:intergenic 15.0%
!!! TGAAAGGAAATTTATTTTTA+TGG + chr6_1:19296065-19296084 None:intergenic 15.0%
!! AATTTGGATTTAAGTATTTA+TGG + chr6_1:19296119-19296138 None:intergenic 15.0%
!! ATAAATACTTAAATCCAAAT+TGG - chr6_1:19296118-19296137 Msa0878390:intron 15.0%
!! AATATTTAATATGTTGAGTA+GGG + chr6_1:19296240-19296259 None:intergenic 15.0%
!!! TATGTAAAAAATCTCTTTTT+AGG + chr6_1:19296342-19296361 None:intergenic 15.0%
!! AATAAGATATTACTTTGAAT+GGG + chr6_1:19296630-19296649 None:intergenic 15.0%
!! AAATAAGATATTACTTTGAA+TGG + chr6_1:19296631-19296650 None:intergenic 15.0%
!! CAAGTTATAATTAATTATAG+AGG - chr6_1:19297027-19297046 Msa0878390:intron 15.0%
!! AGAATATTTATCTATCTCTA+TGG - chr6_1:19293929-19293948 Msa0878390:intron 20.0%
!! AAGTAATATTGTTGAATACT+TGG + chr6_1:19294562-19294581 None:intergenic 20.0%
!! TTCTTTATTAAGTATCTTGA+TGG - chr6_1:19294720-19294739 Msa0878390:intron 20.0%
!!! TTGATGGAATGTAAAATTTT+CGG - chr6_1:19294736-19294755 Msa0878390:intron 20.0%
!! TAAACAACTAAACATAAAGA+TGG - chr6_1:19294857-19294876 Msa0878390:intron 20.0%
!!! TATTTTCGTTTTAATGAGAT+GGG + chr6_1:19295244-19295263 None:intergenic 20.0%
!!! TTATTTTCGTTTTAATGAGA+TGG + chr6_1:19295245-19295264 None:intergenic 20.0%
!! AATAAAGGACTACTAAAATA+TGG - chr6_1:19295628-19295647 Msa0878390:intron 20.0%
!! ATTCATATATTTAATACCCT+TGG - chr6_1:19296026-19296045 Msa0878390:intron 20.0%
!! CAATATTTAATATGTTGAGT+AGG + chr6_1:19296241-19296260 None:intergenic 20.0%
!!! TCAAGAGATTTTACTATAAT+AGG + chr6_1:19296307-19296326 None:intergenic 20.0%
!!! TATAACTTGAATTTGGAATT+TGG + chr6_1:19297016-19297035 None:intergenic 20.0%
!!! GTGATTAAAGTATTAGTTAT+TGG + chr6_1:19297473-19297492 None:intergenic 20.0%
!!! TTTTGTTTTTTACCAAAGTA+GGG + chr6_1:19297850-19297869 None:intergenic 20.0%
!!! ATTTTGTTTTTTACCAAAGT+AGG + chr6_1:19297851-19297870 None:intergenic 20.0%
!! TTCTGTAAATGGTTTATTAA+AGG + chr6_1:19298095-19298114 None:intergenic 20.0%
! ATAATGGTGCAGTAATATAA+TGG + chr6_1:19294607-19294626 None:intergenic 25.0%
! ACTATCTTTATGTTGAATCT+CGG + chr6_1:19294956-19294975 None:intergenic 25.0%
!!! ATTTTCGTTTTAATGAGATG+GGG + chr6_1:19295243-19295262 None:intergenic 25.0%
!!! ATGCTTGTAAAATTGATTTG+TGG + chr6_1:19295385-19295404 None:intergenic 25.0%
!!! TTTACTTGTGTTTTTATGCA+TGG + chr6_1:19295437-19295456 None:intergenic 25.0%
! TAACATTAGCAAACATTAGA+AGG - chr6_1:19295478-19295497 Msa0878390:intron 25.0%
! TAAAACCAATATACTACACT+CGG - chr6_1:19295882-19295901 Msa0878390:intron 25.0%
! TATCTACGTCAAAATATCAA+AGG - chr6_1:19296091-19296110 Msa0878390:intron 25.0%
! TTTATTAATGCATCGTATGA+AGG + chr6_1:19296157-19296176 None:intergenic 25.0%
!! GAGATTTTACTATAATAGGA+AGG + chr6_1:19296303-19296322 None:intergenic 25.0%
!!! AACTCTAAGATTATCATTCA+AGG - chr6_1:19296455-19296474 Msa0878390:intron 25.0%
!!! ACTCTAAGATTATCATTCAA+GGG - chr6_1:19296456-19296475 Msa0878390:intron 25.0%
!! TTAGCTTTCTTAATTGATTC+CGG - chr6_1:19296687-19296706 Msa0878390:intron 25.0%
! TTCAAACTAAAAGTCGATTA+TGG - chr6_1:19296780-19296799 Msa0878390:intron 25.0%
!!! AATTGATTCTAGAATTCGAA+AGG + chr6_1:19296897-19296916 None:intergenic 25.0%
! ATAAAGTTGAAGCTGAAATA+TGG + chr6_1:19296947-19296966 None:intergenic 25.0%
! AAATCAATTCTAGTCCATAA+AGG - chr6_1:19297052-19297071 Msa0878390:intron 25.0%
! GAATAAAATATTGACAAGGT+GGG + chr6_1:19297431-19297450 None:intergenic 25.0%
! TGAATAAAATATTGACAAGG+TGG + chr6_1:19297432-19297451 None:intergenic 25.0%
! TCGCAATTTATAACATTGTT+GGG + chr6_1:19297660-19297679 None:intergenic 25.0%
! ATCGCAATTTATAACATTGT+TGG + chr6_1:19297661-19297680 None:intergenic 25.0%
!!! CATTGATTAATGTTTTAGTG+TGG - chr6_1:19297709-19297728 Msa0878390:intron 25.0%
! AATACAATCGATGTAACTAT+AGG + chr6_1:19297737-19297756 None:intergenic 25.0%
!! AAATGAAGTGTTTCTGTAAA+TGG + chr6_1:19298106-19298125 None:intergenic 25.0%
!! TTACAGAAACACTTCATTTT+CGG - chr6_1:19298107-19298126 Msa0878390:intron 25.0%
! ATAATGAATAACTTACCTGA+TGG - chr6_1:19298275-19298294 Msa0878390:intron 25.0%
ACTTGAGGTTACATTAATCT+TGG + chr6_1:19294136-19294155 None:intergenic 30.0%
TGCAAACTCAATTGATGAAT+AGG - chr6_1:19294230-19294249 Msa0878390:CDS 30.0%
AAACTCAATTGATGAATAGG+AGG - chr6_1:19294233-19294252 Msa0878390:CDS 30.0%
TGAAGTTGTTCATGTTCATA+AGG + chr6_1:19294387-19294406 None:intergenic 30.0%
TGGAAATACATTGACGATAA+TGG + chr6_1:19294623-19294642 None:intergenic 30.0%
AATAATGCTATAGGGGATAA+AGG + chr6_1:19294668-19294687 None:intergenic 30.0%
TCCTTGTGAATAATGCTATA+GGG + chr6_1:19294676-19294695 None:intergenic 30.0%
ATCCTTGTGAATAATGCTAT+AGG + chr6_1:19294677-19294696 None:intergenic 30.0%
TCATTTAACAGCTTAATGCT+AGG + chr6_1:19294817-19294836 None:intergenic 30.0%
TCTGATACTAATTGCAATTG+AGG + chr6_1:19294912-19294931 None:intergenic 30.0%
CTAGTTTCCACAATTATTAC+CGG + chr6_1:19295045-19295064 None:intergenic 30.0%
AAACTAGAAGTGATTGAATG+TGG - chr6_1:19295058-19295077 Msa0878390:intron 30.0%
CAATCTCAATTGTGTAATGA+AGG - chr6_1:19295212-19295231 Msa0878390:intron 30.0%
GCATTCATGTAGAGATTAAA+AGG - chr6_1:19295401-19295420 Msa0878390:intron 30.0%
TTCATGTAGAGATTAAAAGG+AGG - chr6_1:19295404-19295423 Msa0878390:intron 30.0%
GACGTAGATAAGTAATTGAA+AGG + chr6_1:19296081-19296100 None:intergenic 30.0%
AATATAAACTGCTTGTAGAC+TGG + chr6_1:19296201-19296220 None:intergenic 30.0%
TAATAGGAAGGCAAGTATTT+AGG + chr6_1:19296291-19296310 None:intergenic 30.0%
TAAGATTATCATTCAAGGGA+AGG - chr6_1:19296460-19296479 Msa0878390:intron 30.0%
!! AATGTAAAAGTGTCTGATGT+AGG + chr6_1:19296571-19296590 None:intergenic 30.0%
!! GGCTTGTGTTTGTTATTAAT+AGG + chr6_1:19296604-19296623 None:intergenic 30.0%
TACCTTCAATTCACTTTAAC+CGG + chr6_1:19296709-19296728 None:intergenic 30.0%
! AACTAAGAATCTTTTCCAGA+AGG - chr6_1:19296829-19296848 Msa0878390:intron 30.0%
!! AGTAGAATTGATTTTCCTTC+TGG + chr6_1:19296847-19296866 None:intergenic 30.0%
TTGAAATCACTAAAACGCAT+CGG - chr6_1:19296866-19296885 Msa0878390:intron 30.0%
!! CTACCATTTTGATGTAAAGT+AGG + chr6_1:19297295-19297314 None:intergenic 30.0%
CTACTTTACATCAAAATGGT+AGG - chr6_1:19297293-19297312 Msa0878390:intron 30.0%
! TGGAGAGTACAAGAAAAAAA+GGG + chr6_1:19297367-19297386 None:intergenic 30.0%
GCGTGAATAAAATATTGACA+AGG + chr6_1:19297435-19297454 None:intergenic 30.0%
TTATATGTGACGATTTGTGA+GGG + chr6_1:19297630-19297649 None:intergenic 30.0%
CAATTTATAACATTGTTGGG+TGG + chr6_1:19297657-19297676 None:intergenic 30.0%
GTTGTGACTATATATAGTTG+TGG + chr6_1:19297690-19297709 None:intergenic 30.0%
TATTTGTCTGTGATTCTCTA+TGG - chr6_1:19297753-19297772 Msa0878390:CDS 30.0%
! TTGAAGAAGAAGTGTAGTAA+TGG - chr6_1:19297811-19297830 Msa0878390:CDS 30.0%
TCAAGGTCTCAGATAAATTA+TGG + chr6_1:19298151-19298170 None:intergenic 30.0%
TGAAGTTGTTCATGTTCATA+AGG + chr6_1:19294387-19294406 None:intergenic 30.0%
GTTGTTCATGTTCATAAGGT+TGG + chr6_1:19294383-19294402 None:intergenic 35.0%
GAAAGATGATTAAGAACTCC+AGG - chr6_1:19294492-19294511 Msa0878390:intron 35.0%
TGGAAATACATTTGACGAGA+TGG + chr6_1:19294587-19294606 None:intergenic 35.0%
CCTTGTGAATAATGCTATAG+GGG + chr6_1:19294675-19294694 None:intergenic 35.0%
ACAGCTTAATGCTAGGATTT+AGG + chr6_1:19294810-19294829 None:intergenic 35.0%
TAACACTCTTCGAACTGTTA+TGG - chr6_1:19294983-19295002 Msa0878390:intron 35.0%
! TATTGATAACCAAGGAAGCA+CGG + chr6_1:19295337-19295356 None:intergenic 35.0%
! AGGTGAACTATTGATAACCA+AGG + chr6_1:19295345-19295364 None:intergenic 35.0%
! TGGTTTTCTGTGCGAAAAAA+AGG + chr6_1:19295365-19295384 None:intergenic 35.0%
TAGTTGTCAAAGCAAAAACG+CGG - chr6_1:19295506-19295525 Msa0878390:intron 35.0%
!! TATTGATTCTGCCTTCTGAT+CGG - chr6_1:19296256-19296275 Msa0878390:intron 35.0%
TAGGCTATAGGTTAAGAGTA+AGG + chr6_1:19296383-19296402 None:intergenic 35.0%
TTGTTAAGATGGTAGGCTAT+AGG + chr6_1:19296395-19296414 None:intergenic 35.0%
!! TAATCCGTAGCTTGTTAAGA+TGG + chr6_1:19296406-19296425 None:intergenic 35.0%
! TAACAAGCTACGGATTAATG+TGG - chr6_1:19296409-19296428 Msa0878390:intron 35.0%
CAAGGGAAGGTTGTAAAAAA+TGG - chr6_1:19296473-19296492 Msa0878390:intron 35.0%
GATATTACTTTGAATGGGAC+TGG + chr6_1:19296625-19296644 None:intergenic 35.0%
TTCCGGTTAAAGTGAATTGA+AGG - chr6_1:19296704-19296723 Msa0878390:intron 35.0%
! GCACAAAGTTGATTCCTTTA+TGG + chr6_1:19297069-19297088 None:intergenic 35.0%
GAATCAACTTTGTGCTTGTT+TGG - chr6_1:19297074-19297093 Msa0878390:intron 35.0%
! CAATAGTTTCCTTTTTGACG+TGG + chr6_1:19297102-19297121 None:intergenic 35.0%
! AATTCCAGCTTTGACGTAAT+CGG + chr6_1:19297126-19297145 None:intergenic 35.0%
GTGTTTGATTGGATATACGT+TGG + chr6_1:19297192-19297211 None:intergenic 35.0%
ACGCTCATATAGTGTTTGAT+TGG + chr6_1:19297203-19297222 None:intergenic 35.0%
ATCAAACACTATATGAGCGT+AGG - chr6_1:19297203-19297222 Msa0878390:intron 35.0%
TCAAACACTATATGAGCGTA+GGG - chr6_1:19297204-19297223 Msa0878390:intron 35.0%
AGCCTCTTGTGTAAAAAACA+GGG - chr6_1:19297261-19297280 Msa0878390:intron 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG + chr6_1:19297266-19297285 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG - chr6_1:19297266-19297285 Msa0878390:intron 35.0%
CTGCCTACTTTACATCAAAA+TGG - chr6_1:19297289-19297308 Msa0878390:intron 35.0%
TTAAAGCTCCTGTATTTGCA+GGG + chr6_1:19297332-19297351 None:intergenic 35.0%
ATTAAAGCTCCTGTATTTGC+AGG + chr6_1:19297333-19297352 None:intergenic 35.0%
! ATACAGGAGCTTTAATGCAT+CGG - chr6_1:19297337-19297356 Msa0878390:intron 35.0%
! GTGGAGAGTACAAGAAAAAA+AGG + chr6_1:19297368-19297387 None:intergenic 35.0%
TATGTGAGAGAAAGAGTTCA+AGG + chr6_1:19297543-19297562 None:intergenic 35.0%
TATATGTGACGATTTGTGAG+GGG + chr6_1:19297629-19297648 None:intergenic 35.0%
CTTATATGTGACGATTTGTG+AGG + chr6_1:19297631-19297650 None:intergenic 35.0%
!!! TAGTCTCCATTGCTTTTTTG+CGG + chr6_1:19297954-19297973 None:intergenic 35.0%
AGGATGTCTGATCCAATTAA+TGG - chr6_1:19297994-19298013 Msa0878390:intron 35.0%
! GAAACACTTCATTTTCGGTA+AGG - chr6_1:19298112-19298131 Msa0878390:intron 35.0%
! AATTTATCTGAGACCTTGAG+AGG - chr6_1:19298152-19298171 Msa0878390:intron 35.0%
AACATTTGCTTAACCCACTT+GGG + chr6_1:19298217-19298236 None:intergenic 35.0%
GTTCATGTTCATAAGGTTGT+TGG + chr6_1:19298530-19298549 None:intergenic 35.0%
CCATTGTGATATCAAAACCA+GGG + chr6_1:19298561-19298580 None:intergenic 35.0%
TCCATTGTGATATCAAAACC+AGG + chr6_1:19298562-19298581 None:intergenic 35.0%
AAGAGCAACACAAGATGAAC+CGG - chr6_1:19293630-19293649 Msa0878390:CDS 40.0%
CATCATTCATTCACGACTTG+AGG + chr6_1:19294151-19294170 None:intergenic 40.0%
TTACATTATGTAGCCGATGC+AGG - chr6_1:19294177-19294196 Msa0878390:intron 40.0%
TGCACAGGTACATTGAAGTT+TGG + chr6_1:19294325-19294344 None:intergenic 40.0%
GATGAGTTGTTGGAATATGC+TGG + chr6_1:19294349-19294368 None:intergenic 40.0%
GTTCATGTTCATAAGGTTGG+TGG + chr6_1:19294380-19294399 None:intergenic 40.0%
AACATGAACAACTTCAACCC+TGG - chr6_1:19294391-19294410 Msa0878390:CDS 40.0%
! AACAACTTCAACCCTGGTTT+TGG - chr6_1:19294397-19294416 Msa0878390:CDS 40.0%
! TTTTGGTCTCACAATGGAGA+CGG - chr6_1:19294414-19294433 Msa0878390:intron 40.0%
! TAGAGCCTTTTCAAAACTCC+AGG - chr6_1:19294455-19294474 Msa0878390:intron 40.0%
!!! GACATCCTGGAGTTTTGAAA+AGG + chr6_1:19294463-19294482 None:intergenic 40.0%
TTTCTCAAAACGAGACATCC+TGG + chr6_1:19294476-19294495 None:intergenic 40.0%
TTCCTCATAATGAGACATCC+TGG + chr6_1:19294513-19294532 None:intergenic 40.0%
CCCCTATAGCATTATTCACA+AGG - chr6_1:19294672-19294691 Msa0878390:intron 40.0%
ACTATCACTAACACAGACAC+CGG - chr6_1:19295023-19295042 Msa0878390:intron 40.0%
ACAGACACCGGTAATAATTG+TGG - chr6_1:19295035-19295054 Msa0878390:intron 40.0%
TGTCGAACATTGACAAGTGT+CGG - chr6_1:19295120-19295139 Msa0878390:intron 40.0%
AGATTGAGCGTATCAGGAAA+AGG + chr6_1:19295198-19295217 None:intergenic 40.0%
CAATTGAGATTGAGCGTATC+AGG + chr6_1:19295204-19295223 None:intergenic 40.0%
! CAACTTTCAAGTGTCTTCTG+AGG - chr6_1:19295281-19295300 Msa0878390:intron 40.0%
AACCAATATACTACACTCGG+TGG - chr6_1:19295885-19295904 Msa0878390:intron 40.0%
TTTAATACCCTTGGCGTCTT+AGG - chr6_1:19296035-19296054 Msa0878390:intron 40.0%
TTAATACCCTTGGCGTCTTA+GGG - chr6_1:19296036-19296055 Msa0878390:intron 40.0%
GAGAAAGATGCGAACCAATT+TGG + chr6_1:19296135-19296154 None:intergenic 40.0%
! ATTGATTCTGCCTTCTGATC+GGG - chr6_1:19296257-19296276 Msa0878390:intron 40.0%
GGAAGGCAAGTATTTAGGTA+TGG + chr6_1:19296286-19296305 None:intergenic 40.0%
CCTACCATCTTAACAAGCTA+CGG - chr6_1:19296399-19296418 Msa0878390:intron 40.0%
ATCAATCCTAGTTTCTGCTC+TGG - chr6_1:19296976-19296995 Msa0878390:intron 40.0%
! TGTTTGGAACCACGTCAAAA+AGG - chr6_1:19297090-19297109 Msa0878390:intron 40.0%
! ATTCCAGCTTTGACGTAATC+GGG + chr6_1:19297125-19297144 None:intergenic 40.0%
TTGCTTAGACGACAACACAT+TGG - chr6_1:19297148-19297167 Msa0878390:intron 40.0%
! TGATTGGATATACGTTGGCT+TGG + chr6_1:19297187-19297206 None:intergenic 40.0%
TATGAGCGTAGGGTTATATC+TGG - chr6_1:19297214-19297233 Msa0878390:intron 40.0%
CAGCCTCTTGTGTAAAAAAC+AGG - chr6_1:19297260-19297279 Msa0878390:intron 40.0%
! TACAGGAGCTTTAATGCATC+GGG - chr6_1:19297338-19297357 Msa0878390:intron 40.0%
TGTGTGAAACTTACCTGGAA+AGG + chr6_1:19297399-19297418 None:intergenic 40.0%
TCGTTTGTGTGAAACTTACC+TGG + chr6_1:19297404-19297423 None:intergenic 40.0%
TGTTGAATAGCACGTGGTAT+GGG + chr6_1:19297508-19297527 None:intergenic 40.0%
!! AAAGAGTTCAAGGTTGGTGA+GGG + chr6_1:19297533-19297552 None:intergenic 40.0%
TGAGAGAAAGAGTTCAAGGT+TGG + chr6_1:19297539-19297558 None:intergenic 40.0%
TAACCACCGCAAAAAAGCAA+TGG - chr6_1:19297945-19297964 Msa0878390:CDS 40.0%
AATGGAGACTATGACCTATG+AGG - chr6_1:19297963-19297982 Msa0878390:CDS 40.0%
GTGGACACACAACCATTAAT+TGG + chr6_1:19298009-19298028 None:intergenic 40.0%
GAACATTTGCTTAACCCACT+TGG + chr6_1:19298218-19298237 None:intergenic 40.0%
CATGTTCATAAGGTTGTTGG+TGG + chr6_1:19298527-19298546 None:intergenic 40.0%
AACATGAACAACTTCAACCC+TGG - chr6_1:19294391-19294410 Msa0878390:CDS 40.0%
!!! CCCTGGTTTTGATATCACAA+TGG - chr6_1:19298558-19298577 Msa0878390:CDS 40.0%
! TTGAGCCTTTTCAAAACTCC+AGG - chr6_1:19298605-19298624 Msa0878390:CDS 40.0%
!!! GAGAACCTGGAGTTTTGAAA+AGG + chr6_1:19298613-19298632 None:intergenic 40.0%
TCCAGGTTCTCTTATCATCA+GGG - chr6_1:19298622-19298641 Msa0878390:CDS 40.0%
ATGGTAGTAGTTCGGGAAAC+AGG - chr6_1:19293566-19293585 Msa0878390:CDS 45.0%
AAGAACTTGCAAGCACCACA+CGG + chr6_1:19293664-19293683 None:intergenic 45.0%
TGCATCTTTGCACCCTACTT+TGG - chr6_1:19293706-19293725 Msa0878390:CDS 45.0%
CCTTGGTCAGTACCAAAGTA+GGG + chr6_1:19293721-19293740 None:intergenic 45.0%
ACCTTGGTCAGTACCAAAGT+AGG + chr6_1:19293722-19293741 None:intergenic 45.0%
TTTCCTATGAGGCTCAAGCT+AGG - chr6_1:19293845-19293864 Msa0878390:CDS 45.0%
CTGTTGCTGCAAAGCAAGAA+GGG + chr6_1:19293902-19293921 None:intergenic 45.0%
GGTTGCTGTACCAGTTGAAA+CGG + chr6_1:19294304-19294323 None:intergenic 45.0%
!! CATGTTCATAAGGTTGGTGG+TGG + chr6_1:19294377-19294396 None:intergenic 45.0%
CCATTGTGAGACCAAAACCA+GGG + chr6_1:19294411-19294430 None:intergenic 45.0%
TCCATTGTGAGACCAAAACC+AGG + chr6_1:19294412-19294431 None:intergenic 45.0%
CTCCAGGATGTCTCATTATG+AGG - chr6_1:19294508-19294527 Msa0878390:intron 45.0%
ACACTTGACACAGACACTTG+TGG + chr6_1:19295084-19295103 None:intergenic 45.0%
AGTGTCTGTGTCAAGTGTGT+CGG - chr6_1:19295086-19295105 Msa0878390:intron 45.0%
CCTTCCTCTGTTGTCAAACA+CGG + chr6_1:19295969-19295988 None:intergenic 45.0%
! CTGCTTGTAGACTGGTGTTA+TGG + chr6_1:19296193-19296212 None:intergenic 45.0%
!! CCGTAGCTTGTTAAGATGGT+AGG + chr6_1:19296402-19296421 None:intergenic 45.0%
AATCCTAGTTTCTGCTCTGG+AGG - chr6_1:19296979-19296998 Msa0878390:intron 45.0%
TATTTGCAGGGTTCGGAAAG+GGG + chr6_1:19297320-19297339 None:intergenic 45.0%
GTATTTGCAGGGTTCGGAAA+GGG + chr6_1:19297321-19297340 None:intergenic 45.0%
TGTATTTGCAGGGTTCGGAA+AGG + chr6_1:19297322-19297341 None:intergenic 45.0%
TTTCCGAACCCTGCAAATAC+AGG - chr6_1:19297321-19297340 Msa0878390:intron 45.0%
TCCACGAAGATAACCTTTCC+AGG - chr6_1:19297383-19297402 Msa0878390:intron 45.0%
ACCTGGAAAGGTTATCTTCG+TGG + chr6_1:19297387-19297406 None:intergenic 45.0%
TTGAATAGCACGTGGTATGG+GGG + chr6_1:19297506-19297525 None:intergenic 45.0%
GTTGAATAGCACGTGGTATG+GGG + chr6_1:19297507-19297526 None:intergenic 45.0%
GTGTTGAATAGCACGTGGTA+TGG + chr6_1:19297509-19297528 None:intergenic 45.0%
!! GAAAGAGTTCAAGGTTGGTG+AGG + chr6_1:19297534-19297553 None:intergenic 45.0%
GTTGGTCATGTGAATGTGGT+TGG + chr6_1:19297599-19297618 None:intergenic 45.0%
GAACGTTGGTCATGTGAATG+TGG + chr6_1:19297603-19297622 None:intergenic 45.0%
CAGATAAATCGACACCGTGT+GGG - chr6_1:19297776-19297795 Msa0878390:CDS 45.0%
AGATAAATCGACACCGTGTG+GGG - chr6_1:19297777-19297796 Msa0878390:CDS 45.0%
TGCATCTTTGCACCCTACTT+TGG - chr6_1:19293706-19293725 Msa0878390:CDS 45.0%
! TAGCTTTGCAGATGTGCACA+AGG - chr6_1:19297876-19297895 Msa0878390:intron 45.0%
!!! GCTTTTTTGCGGTGGTTAGT+TGG + chr6_1:19297943-19297962 None:intergenic 45.0%
!!! TCTCCATTGCTTTTTTGCGG+TGG + chr6_1:19297951-19297970 None:intergenic 45.0%
!! CTTAGAGAGTACTCCTCTCA+AGG + chr6_1:19298168-19298187 None:intergenic 45.0%
!! CTTGAGAGGAGTACTCTCTA+AGG - chr6_1:19298166-19298185 Msa0878390:intron 45.0%
TTTGCTTAACCCACTTGGGT+TGG + chr6_1:19298213-19298232 None:intergenic 45.0%
AAAGCTCAGCAGACGAACAA+CGG - chr6_1:19298340-19298359 Msa0878390:CDS 45.0%
!! TGCACAGAGGCATTGAAGTT+TGG + chr6_1:19298427-19298446 None:intergenic 45.0%
!! GATGGATTGTTGGAGTATGC+TGG + chr6_1:19298451-19298470 None:intergenic 45.0%
!! GATGGAAGGAGATGGATTGT+TGG + chr6_1:19298461-19298480 None:intergenic 45.0%
TTCATGAGATCGTCGATGGA+AGG + chr6_1:19298475-19298494 None:intergenic 45.0%
CATGTTCATGAGATCGTCGA+TGG + chr6_1:19298479-19298498 None:intergenic 45.0%
CTCCAGGTTCTCTTATCATC+AGG - chr6_1:19298621-19298640 Msa0878390:CDS 45.0%
TCCCTGATGATAAGAGAACC+TGG + chr6_1:19298626-19298645 None:intergenic 45.0%
!! GGGTGGTGATGGTAGTAGTT+CGG - chr6_1:19293558-19293577 Msa0878390:CDS 50.0%
!! GGTGGTGATGGTAGTAGTTC+GGG - chr6_1:19293559-19293578 Msa0878390:CDS 50.0%
GTGGTGCTTGCAAGTTCTTG+AGG - chr6_1:19293665-19293684 Msa0878390:CDS 50.0%
GTGCTTGCAAGTTCTTGAGG+AGG - chr6_1:19293668-19293687 Msa0878390:CDS 50.0%
! TTGAGGAGGAAGTGTAGCAG+TGG - chr6_1:19293682-19293701 Msa0878390:CDS 50.0%
!! CCCTACTTTGGTACTGACCA+AGG - chr6_1:19293718-19293737 Msa0878390:CDS 50.0%
!! CTTTGGTACTGACCAAGGTG+CGG - chr6_1:19293723-19293742 Msa0878390:CDS 50.0%
TAAGTTTGCGGCTGTGCACA+AGG - chr6_1:19293747-19293766 Msa0878390:CDS 50.0%
AAATAGTCGCCGCAGCTTCT+TGG + chr6_1:19293828-19293847 None:intergenic 50.0%
TGCGGCGACTATTTCCTATG+AGG - chr6_1:19293834-19293853 Msa0878390:CDS 50.0%
TAGCCTAGCTTGAGCCTCAT+AGG + chr6_1:19293851-19293870 None:intergenic 50.0%
! TCAAGCTAGGCTAGCTGATC+CGG - chr6_1:19293858-19293877 Msa0878390:intron 50.0%
! AGGCTAGCTGATCCGGTTTA+TGG - chr6_1:19293865-19293884 Msa0878390:intron 50.0%
GTGGACACACAGCCATAAAC+CGG + chr6_1:19293880-19293899 None:intergenic 50.0%
TTGCTGCAAAGCAAGAAGGG+TGG + chr6_1:19293899-19293918 None:intergenic 50.0%
CCTGTTGCTGCAAAGCAAGA+AGG + chr6_1:19293903-19293922 None:intergenic 50.0%
CCTTCTTGCTTTGCAGCAAC+AGG - chr6_1:19293900-19293919 Msa0878390:intron 50.0%
CATTATGTAGCCGATGCAGG+TGG - chr6_1:19294180-19294199 Msa0878390:intron 50.0%
TTGAAACGGCGGCTGATATG+GGG + chr6_1:19294290-19294309 None:intergenic 50.0%
GTTGAAACGGCGGCTGATAT+GGG + chr6_1:19294291-19294310 None:intergenic 50.0%
AGTTGAAACGGCGGCTGATA+TGG + chr6_1:19294292-19294311 None:intergenic 50.0%
ATATCAGCCGCCGTTTCAAC+TGG - chr6_1:19294291-19294310 Msa0878390:CDS 50.0%
TGCTGTACCAGTTGAAACGG+CGG + chr6_1:19294301-19294320 None:intergenic 50.0%
! TTGGAATATGCTGGCTGCAC+AGG + chr6_1:19294340-19294359 None:intergenic 50.0%
GGTGGAAGCAGATGAGTTGT+TGG + chr6_1:19294359-19294378 None:intergenic 50.0%
!!! CCCTGGTTTTGGTCTCACAA+TGG - chr6_1:19294408-19294427 Msa0878390:intron 50.0%
!! GGCTCTAAGCTCTGTGATGA+AGG + chr6_1:19294442-19294461 None:intergenic 50.0%
! TGATAACCAAGGAAGCACGG+AGG + chr6_1:19295334-19295353 None:intergenic 50.0%
CGCCACCGAGTGTAGTATAT+TGG + chr6_1:19295890-19295909 None:intergenic 50.0%
CCGTGTTTGACAACAGAGGA+AGG - chr6_1:19295966-19295985 Msa0878390:intron 50.0%
TGGTAACCCTAAGACGCCAA+GGG + chr6_1:19296045-19296064 None:intergenic 50.0%
ATGGTAACCCTAAGACGCCA+AGG + chr6_1:19296046-19296065 None:intergenic 50.0%
TCTCCTCCAGAGCAGAAACT+AGG + chr6_1:19296985-19297004 None:intergenic 50.0%
TTGCCCGATTACGTCAAAGC+TGG - chr6_1:19297119-19297138 Msa0878390:intron 50.0%
GCTCCTGTATTTGCAGGGTT+CGG + chr6_1:19297327-19297346 None:intergenic 50.0%
!! AGGGAGTGTTGAATAGCACG+TGG + chr6_1:19297514-19297533 None:intergenic 50.0%
GGTTGGCAACGTGAATGATG+TGG + chr6_1:19297582-19297601 None:intergenic 50.0%
TTTGTGAGGGGAGTGAACGT+TGG + chr6_1:19297617-19297636 None:intergenic 50.0%
GCAGATAAATCGACACCGTG+TGG - chr6_1:19297775-19297794 Msa0878390:CDS 50.0%
GCAGATGTGCACAAGGTCTT+TGG - chr6_1:19297883-19297902 Msa0878390:intron 50.0%
GGACAAGAGCTTCGACACAT+TGG + chr6_1:19297914-19297933 None:intergenic 50.0%
! GCGGTGGTTAGTTGGAATAG+TGG + chr6_1:19297935-19297954 None:intergenic 50.0%
GACTATGACCTATGAGGCTC+AGG - chr6_1:19297969-19297988 Msa0878390:CDS 50.0%
ACTTACCTGATGGCCAATCC+AGG - chr6_1:19298285-19298304 Msa0878390:CDS 50.0%
! GTAGCATTTGCTGATGCTGC+AGG + chr6_1:19298399-19298418 None:intergenic 50.0%
AGATCGTCGATGGAAGGAGA+TGG + chr6_1:19298469-19298488 None:intergenic 50.0%
!! TGTTGGTGGCAGCAAGAACA+GGG + chr6_1:19298513-19298532 None:intergenic 50.0%
!! TTGTTGGTGGCAGCAAGAAC+AGG + chr6_1:19298514-19298533 None:intergenic 50.0%
AGGCTCAAAGCTCTGTGATG+AGG + chr6_1:19298593-19298612 None:intergenic 50.0%
GAACCGGTTATTACGCCGTG+TGG - chr6_1:19293646-19293665 Msa0878390:CDS 55.0%
GCACCACACGGCGTAATAAC+CGG + chr6_1:19293652-19293671 None:intergenic 55.0%
CCAAGGTGCGGCTAAGTTTG+CGG - chr6_1:19293735-19293754 Msa0878390:CDS 55.0%
AGCTTCTTGGCGATGGCTAG+CGG + chr6_1:19293815-19293834 None:intergenic 55.0%
TAGCCATCGCCAAGAAGCTG+CGG - chr6_1:19293816-19293835 Msa0878390:CDS 55.0%
TGCATAGCTGCCACCTGCAT+CGG + chr6_1:19294193-19294212 None:intergenic 55.0%
GTCAAAGCAAAAACGCGGCG+CGG - chr6_1:19295511-19295530 Msa0878390:intron 55.0%
GGCCACCCCAAAAATTGACG+CGG - chr6_1:19295537-19295556 Msa0878390:intron 55.0%
! ACCGCGCCGCGTCAATTTTT+GGG + chr6_1:19295546-19295565 None:intergenic 55.0%
! TACCGCGCCGCGTCAATTTT+TGG + chr6_1:19295547-19295566 None:intergenic 55.0%
! GTGACGCGGCTCCTTGATTT+TGG - chr6_1:19295912-19295931 Msa0878390:intron 55.0%
GGTATGGCAACCCGATCAGA+AGG + chr6_1:19296270-19296289 None:intergenic 55.0%
AAGTGCTTGCAAGCCCCACA+CGG + chr6_1:19297793-19297812 None:intergenic 55.0%
TGACCTATGAGGCTCAGGCT+AGG - chr6_1:19297974-19297993 Msa0878390:CDS 55.0%
CATCCTAGCCTGAGCCTCAT+AGG + chr6_1:19297980-19297999 None:intergenic 55.0%
!! TGGCCTGGTCGTGTTGGTTT+GGG + chr6_1:19298193-19298212 None:intergenic 55.0%
!! TTGGCCTGGTCGTGTTGGTT+TGG + chr6_1:19298194-19298213 None:intergenic 55.0%
!! TTAACCCACTTGGGTTGGCC+TGG + chr6_1:19298208-19298227 None:intergenic 55.0%
!! CTTCACCTGGATTGGCCATC+AGG + chr6_1:19298293-19298312 None:intergenic 55.0%
CTGATGGCCAATCCAGGTGA+AGG - chr6_1:19298291-19298310 Msa0878390:CDS 55.0%
TGCAGTGCCTTCACCTGGAT+TGG + chr6_1:19298301-19298320 None:intergenic 55.0%
CTGCAGGTCTGTGGTCTGAA+GGG + chr6_1:19298383-19298402 None:intergenic 55.0%
TTGCTGATGCTGCAGGTCTG+TGG + chr6_1:19298392-19298411 None:intergenic 55.0%
! GGAGTATGCTGGTTGCACAG+AGG + chr6_1:19298440-19298459 None:intergenic 55.0%
GCTGAGTCACAGGGTGGTGA+TGG - chr6_1:19293547-19293566 Msa0878390:CDS 60.0%
CCGCAAACTTAGCCGCACCT+TGG + chr6_1:19293738-19293757 None:intergenic 60.0%
! GCGGCTGTGCACAAGGTGTT+TGG - chr6_1:19293754-19293773 Msa0878390:CDS 60.0%
GCGATGGCTAGCGGGAATGT+TGG + chr6_1:19293806-19293825 None:intergenic 60.0%
GCTTCTTGGCGATGGCTAGC+GGG + chr6_1:19293814-19293833 None:intergenic 60.0%
GGTGGCAGCTATGCAAGCAG+AGG - chr6_1:19294198-19294217 Msa0878390:CDS 60.0%
CTGTCTCCTCCGTGCTTCCT+TGG - chr6_1:19295325-19295344 Msa0878390:intron 60.0%
!! CGCCGCGTCAATTTTTGGGG+TGG + chr6_1:19295542-19295561 None:intergenic 60.0%
! CCGCGCCGCGTCAATTTTTG+GGG + chr6_1:19295545-19295564 None:intergenic 60.0%
CCCCAAAAATTGACGCGGCG+CGG - chr6_1:19295542-19295561 Msa0878390:intron 60.0%
AATTGACGCGGCGCGGTATG+CGG - chr6_1:19295549-19295568 Msa0878390:intron 60.0%
GCGGGCGCTATTACATGACG+CGG - chr6_1:19295579-19295598 Msa0878390:intron 60.0%
TTGTCAAACACGGCCGCTCC+CGG + chr6_1:19295959-19295978 None:intergenic 60.0%
GCGGCCGTGTTTGACAACAG+AGG - chr6_1:19295962-19295981 Msa0878390:intron 60.0%
GGTCCCAAACCAACACGACC+AGG - chr6_1:19298187-19298206 Msa0878390:intron 60.0%
!! TTGGGTTGGCCTGGTCGTGT+TGG + chr6_1:19298199-19298218 None:intergenic 60.0%
ACGACCAGGCCAACCCAAGT+GGG - chr6_1:19298201-19298220 Msa0878390:intron 60.0%
CTGCTTGCAGTGCCTTCACC+TGG + chr6_1:19298306-19298325 None:intergenic 60.0%
GCTGCAGGTCTGTGGTCTGA+AGG + chr6_1:19298384-19298403 None:intergenic 60.0%
TCGCCGCAGCTTCTTGGCGA+TGG + chr6_1:19293822-19293841 None:intergenic 65.0%
ATTGACGCGGCGCGGTATGC+GGG - chr6_1:19295550-19295569 Msa0878390:intron 65.0%
! CACTCGGTGGCGTTGTGACG+CGG - chr6_1:19295898-19295917 Msa0878390:intron 65.0%
GCGCGGAGCGGCCAAAATCA+AGG + chr6_1:19295926-19295945 None:intergenic 65.0%
CACGACCAGGCCAACCCAAG+TGG - chr6_1:19298200-19298219 Msa0878390:intron 65.0%
AGCAAAAACGCGGCGCGGCG+CGG - chr6_1:19295516-19295535 Msa0878390:intron 70.0%
! CGCGGTATGCGGGCGCGACG+CGG - chr6_1:19295560-19295579 Msa0878390:intron 80.0%
! GCGGTATGCGGGCGCGACGC+GGG - chr6_1:19295561-19295580 Msa0878390:intron 80.0%
! GGCGCTATCGCGGCGCGGAG+CGG + chr6_1:19295938-19295957 None:intergenic 80.0%
! GCTCCGCGCCGCGATAGCGC+CGG - chr6_1:19295937-19295956 Msa0878390:intron 80.0%
! CTCCGCGCCGCGATAGCGCC+GGG - chr6_1:19295938-19295957 Msa0878390:intron 80.0%
! CTCCCGGCGCTATCGCGGCG+CGG + chr6_1:19295943-19295962 None:intergenic 80.0%
!! CGCCGCGATAGCGCCGGGAG+CGG - chr6_1:19295943-19295962 Msa0878390:intron 80.0%
! GGCCGCTCCCGGCGCTATCG+CGG + chr6_1:19295948-19295967 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 19293544 19298654 19293544 ID=Msa0878390;Name=Msa0878390
chr6_1 mRNA 19293544 19298654 19293544 ID=Msa0878390-mRNA-1;Parent=Msa0878390;Name=Msa0878390-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|0.2|0|6|0|404
chr6_1 exon 19298439 19298654 19298439 ID=Msa0878390-mRNA-1:exon:5260;Parent=Msa0878390-mRNA-1
chr6_1 exon 19298277 19298429 19298277 ID=Msa0878390-mRNA-1:exon:5259;Parent=Msa0878390-mRNA-1
chr6_1 exon 19297886 19297999 19297886 ID=Msa0878390-mRNA-1:exon:5258;Parent=Msa0878390-mRNA-1
chr6_1 exon 19297714 19297879 19297714 ID=Msa0878390-mRNA-1:exon:5257;Parent=Msa0878390-mRNA-1
chr6_1 exon 19294183 19294419 19294183 ID=Msa0878390-mRNA-1:exon:5256;Parent=Msa0878390-mRNA-1
chr6_1 exon 19293544 19293872 19293544 ID=Msa0878390-mRNA-1:exon:5255;Parent=Msa0878390-mRNA-1
chr6_1 CDS 19298439 19298654 19298439 ID=Msa0878390-mRNA-1:cds;Parent=Msa0878390-mRNA-1
chr6_1 CDS 19298277 19298429 19298277 ID=Msa0878390-mRNA-1:cds;Parent=Msa0878390-mRNA-1
chr6_1 CDS 19297886 19297999 19297886 ID=Msa0878390-mRNA-1:cds;Parent=Msa0878390-mRNA-1
chr6_1 CDS 19297714 19297879 19297714 ID=Msa0878390-mRNA-1:cds;Parent=Msa0878390-mRNA-1
chr6_1 CDS 19294183 19294419 19294183 ID=Msa0878390-mRNA-1:cds;Parent=Msa0878390-mRNA-1
chr6_1 CDS 19293544 19293872 19293544 ID=Msa0878390-mRNA-1:cds;Parent=Msa0878390-mRNA-1
Gene Sequence

>Msa0878390

ATGGCTGAGTCACAGGGTGGTGATGGTAGTAGTTCGGGAAACAGGCGCAATAAAAGCGCAAATGCTGCTGCAAAGCGTGCAATAGCAAGAGCAACACAAGATGAACCGGTTATTACGCCGTGTGGTGCTTGCAAGTTCTTGAGGAGGAAGTGTAGCAGTGGATGCATCTTTGCACCCTACTTTGGTACTGACCAAGGTGCGGCTAAGTTTGCGGCTGTGTTTGGTGCTAGCAATGTGTCTAAGCACTTGTCCAACATTCCCGCTAGCCATCGCCAAGAAGCTGCGGCGACTATTTCCTATGAGGCTCAAGCTAGGCTAGCTGATCCGGTTTATGGCTGTGTGTCCACCCTTCTTGCTTTGCAGCAACAGGTGGCAGCTATGCAAGCAGAGGTCTCGATGATGCAAACTCAATTGATGAATAGGAGGCTTGCATATGCAAATGCAAGTACTCTTCAAGCCCCATATCAGCCGCCGTTTCAACTGCAACCAAACTTCAATGTACCTGTGCAGCCAGCATATTCCAACAACTCATCTGCTTCCACCACCAACCTTATGAACATGAACAACTTCAACCCTGGTTTTGGTCTCACAATGGAGACGGCACCTTCATCACAGAGCTTAGAGCCTTTTCAAAACTCCAGGATGTCTCATAAATCGACACCGTGTGGGGCTTGCAAGCACTTGAAGAAGAAGTGTAGTAATGGATGCATCTTTGCACCCTACTTTGGTAAAAAACAAAATGAAGCTAGCTTTGCAGATGTGCACAAGGTCTTTGGAGCTGCCAATGTGTCGAAGCTCTTGTCCACTATTCCAACTAACCACCGCAAAAAAGCAATGGAGACTATGACCTATGAGGCTCAGGCTAGGATGTCTGATCCAATTAATGAGATCTCAATGATGAAAGCTCAGCAGACGAACAACGGATTTGCATATGCGAATGCCCTTCAGACCACAGACCTGCAGCATCAGCAAATGCTACAGCAACCAAACTTCAATGCCTCTGTGCAACCAGCATACTCCAACAATCCATCTCCTTCCATCGACGATCTCATGAACATGAACAACTTCAACCCTGTTCTTGCTGCCACCAACAACCTTATGAACATGAACAACTTCAACCCTGGTTTTGATATCACAATGGAGACAGCATCCTCATCACAGAGCTTTGAGCCTTTTCAAAACTCCAGGTTCTCTTATCATCAGGGAGACAATTAA
Protein sequence

>Msa0878390

MAESQGGDGSSSGNRRNKSANAAAKRAIARATQDEPVITPCGACKFLRRKCSSGCIFAPYFGTDQGAAKFAAVFGASNVSKHLSNIPASHRQEAAATISYEAQARLADPVYGCVSTLLALQQQVAAMQAEVSMMQTQLMNRRLAYANASTLQAPYQPPFQLQPNFNVPVQPAYSNNSSASTTNLMNMNNFNPGFGLTMETAPSSQSLEPFQNSRMSHKSTPCGACKHLKKKCSNGCIFAPYFGKKQNEASFADVHKVFGAANVSKLLSTIPTNHRKKAMETMTYEAQARMSDPINEISMMKAQQTNNGFAYANALQTTDLQHQQMLQQPNFNASVQPAYSNNPSPSIDDLMNMNNFNPVLAATNNLMNMNNFNPGFDITMETASSSQSFEPFQNSRFSYHQGDN*