Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0883560 | XP_013451804.1 | 98.065 | 310 | 6 | 0 | 1 | 310 | 1 | 310 | 0.0 | 621 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0883560 | sp|Q9MA75|VIP1_ARATH | 45.260 | 327 | 121 | 12 | 13 | 287 | 12 | 332 | 1.79e-65 | 212 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0883560 | A0A072U839 | 98.065 | 310 | 6 | 0 | 1 | 310 | 1 | 310 | 0.0 | 621 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0883560 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0883560 | MtrunA17_Chr6g0463571 | 98.065 | 310 | 6 | 0 | 1 | 310 | 1 | 310 | 0.0 | 621 |
| Msa0883560 | MtrunA17_Chr5g0432701 | 50.781 | 256 | 86 | 9 | 26 | 274 | 49 | 271 | 6.24e-61 | 197 |
| Msa0883560 | MtrunA17_Chr3g0107491 | 44.710 | 293 | 106 | 14 | 26 | 281 | 36 | 309 | 2.78e-52 | 176 |
| Msa0883560 | MtrunA17_Chr4g0036071 | 57.714 | 175 | 66 | 3 | 76 | 243 | 279 | 452 | 1.82e-49 | 171 |
| Msa0883560 | MtrunA17_Chr3g0128781 | 49.541 | 218 | 84 | 6 | 28 | 243 | 7 | 200 | 4.05e-49 | 166 |
| Msa0883560 | MtrunA17_Chr2g0329551 | 57.143 | 168 | 57 | 4 | 107 | 260 | 168 | 334 | 4.56e-47 | 163 |
| Msa0883560 | MtrunA17_Chr1g0156051 | 45.415 | 229 | 98 | 8 | 74 | 282 | 303 | 524 | 4.69e-33 | 127 |
| Msa0883560 | MtrunA17_Chr2g0316551 | 49.474 | 95 | 48 | 0 | 149 | 243 | 206 | 300 | 1.31e-20 | 90.5 |
| Msa0883560 | MtrunA17_Chr4g0040891 | 43.966 | 116 | 58 | 1 | 149 | 257 | 192 | 307 | 1.69e-19 | 87.4 |
| Msa0883560 | MtrunA17_Chr2g0325131 | 47.000 | 100 | 53 | 0 | 149 | 248 | 189 | 288 | 8.02e-19 | 85.5 |
| Msa0883560 | MtrunA17_Chr1g0202051 | 34.361 | 227 | 132 | 6 | 31 | 252 | 11 | 225 | 1.18e-18 | 84.3 |
| Msa0883560 | MtrunA17_Chr8g0380611 | 30.153 | 262 | 141 | 11 | 11 | 244 | 75 | 322 | 1.10e-13 | 70.9 |
| Msa0883560 | MtrunA17_Chr2g0306581 | 65.306 | 49 | 17 | 0 | 139 | 187 | 1 | 49 | 2.68e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0883560 | AT1G43700.1 | 45.260 | 327 | 121 | 12 | 13 | 287 | 12 | 332 | 1.82e-66 | 212 |
| Msa0883560 | AT2G31370.5 | 64.828 | 145 | 41 | 2 | 109 | 244 | 151 | 294 | 4.24e-50 | 171 |
| Msa0883560 | AT2G31370.2 | 59.880 | 167 | 56 | 3 | 109 | 265 | 151 | 316 | 1.26e-49 | 170 |
| Msa0883560 | AT2G31370.4 | 59.880 | 167 | 56 | 3 | 109 | 265 | 151 | 316 | 1.26e-49 | 170 |
| Msa0883560 | AT2G31370.1 | 59.880 | 167 | 56 | 3 | 109 | 265 | 151 | 316 | 1.26e-49 | 170 |
| Msa0883560 | AT2G31370.7 | 59.880 | 167 | 56 | 3 | 109 | 265 | 151 | 316 | 1.26e-49 | 170 |
| Msa0883560 | AT2G31370.3 | 59.880 | 167 | 56 | 3 | 109 | 265 | 151 | 316 | 1.26e-49 | 170 |
| Msa0883560 | AT2G31370.6 | 59.880 | 167 | 56 | 3 | 109 | 265 | 151 | 316 | 1.26e-49 | 170 |
| Msa0883560 | AT2G40620.1 | 46.000 | 250 | 110 | 8 | 2 | 243 | 8 | 240 | 4.01e-49 | 167 |
| Msa0883560 | AT4G38900.2 | 55.497 | 191 | 62 | 5 | 73 | 243 | 299 | 486 | 4.18e-49 | 172 |
| Msa0883560 | AT4G38900.3 | 55.497 | 191 | 62 | 5 | 73 | 243 | 299 | 486 | 4.18e-49 | 172 |
| Msa0883560 | AT4G38900.1 | 53.807 | 197 | 62 | 6 | 73 | 243 | 299 | 492 | 1.27e-46 | 165 |
| Msa0883560 | AT1G06070.1 | 54.598 | 174 | 63 | 3 | 109 | 273 | 159 | 325 | 7.78e-46 | 160 |
| Msa0883560 | AT1G06850.1 | 62.791 | 129 | 47 | 1 | 123 | 251 | 121 | 248 | 2.35e-45 | 157 |
| Msa0883560 | AT2G21230.4 | 54.444 | 180 | 66 | 3 | 76 | 243 | 287 | 462 | 1.32e-44 | 159 |
| Msa0883560 | AT2G21230.1 | 54.444 | 180 | 66 | 3 | 76 | 243 | 287 | 462 | 1.32e-44 | 159 |
| Msa0883560 | AT2G21230.3 | 52.688 | 186 | 66 | 4 | 76 | 243 | 287 | 468 | 2.57e-42 | 153 |
| Msa0883560 | AT2G21230.2 | 53.846 | 169 | 62 | 3 | 76 | 232 | 287 | 451 | 3.57e-40 | 146 |
| Msa0883560 | AT1G06850.2 | 72.152 | 79 | 21 | 1 | 123 | 201 | 121 | 198 | 8.30e-28 | 108 |
| Msa0883560 | AT2G13150.1 | 35.503 | 169 | 93 | 4 | 83 | 244 | 83 | 242 | 7.01e-19 | 84.7 |
| Msa0883560 | AT2G42380.2 | 41.880 | 117 | 57 | 1 | 149 | 254 | 184 | 300 | 7.27e-19 | 85.9 |
| Msa0883560 | AT3G58120.1 | 47.368 | 95 | 50 | 0 | 149 | 243 | 200 | 294 | 1.36e-18 | 85.1 |
| Msa0883560 | AT2G12940.1 | 32.597 | 181 | 108 | 5 | 83 | 260 | 82 | 251 | 1.74e-17 | 81.6 |
| Msa0883560 | AT2G12900.1 | 38.235 | 102 | 62 | 1 | 143 | 244 | 109 | 209 | 2.94e-16 | 77.4 |
| Msa0883560 | AT2G42380.5 | 45.238 | 84 | 46 | 0 | 149 | 232 | 184 | 267 | 5.01e-15 | 74.3 |
| Msa0883560 | AT3G58120.2 | 45.679 | 81 | 44 | 0 | 149 | 229 | 200 | 280 | 4.81e-14 | 71.6 |
| Msa0883560 | AT1G58110.1 | 28.571 | 252 | 135 | 7 | 22 | 244 | 87 | 322 | 4.59e-13 | 69.3 |
| Msa0883560 | AT1G58110.2 | 28.571 | 252 | 135 | 7 | 22 | 244 | 87 | 322 | 4.59e-13 | 69.3 |
| Msa0883560 | AT2G42380.1 | 37.607 | 117 | 51 | 2 | 149 | 254 | 184 | 289 | 1.27e-12 | 67.8 |
| Msa0883560 | AT2G21235.1 | 38.235 | 102 | 62 | 1 | 151 | 252 | 359 | 459 | 2.36e-12 | 67.8 |
| Msa0883560 | AT2G42380.3 | 64.444 | 45 | 16 | 0 | 149 | 193 | 184 | 228 | 1.78e-11 | 63.5 |
| Msa0883560 | AT2G42380.4 | 64.444 | 45 | 16 | 0 | 149 | 193 | 184 | 228 | 1.78e-11 | 63.5 |
Find 105 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATGCCAGGTTGTGTCTGC+TGG | 0.238257 | 6_1:-34783142 | None:intergenic |
| TATGTATCTTCTACAGTTTA+AGG | 0.243523 | 6_1:+34783354 | Msa0883560:three_prime_UTR |
| AAGACAATTTCCTCATCTTT+AGG | 0.252728 | 6_1:+34778077 | Msa0883560:five_prime_UTR |
| ATAAAACATCATAGGATTAA+AGG | 0.291195 | 6_1:-34783334 | None:intergenic |
| TTTACAGGATTCTTGCTAAT+AGG | 0.313599 | 6_1:+34780313 | Msa0883560:intron |
| CGTCAGAGGGACGGCATCTA+AGG | 0.326982 | 6_1:+34778561 | Msa0883560:CDS |
| TTGATCCTAAGAGAGCTAAA+AGG | 0.339939 | 6_1:+34778774 | Msa0883560:CDS |
| TGATTTGACTGCTCAGAATA+AGG | 0.343859 | 6_1:+34782415 | Msa0883560:CDS |
| CAACATCAAAGTAGATGATT+TGG | 0.347956 | 6_1:+34783247 | Msa0883560:three_prime_UTR |
| GGGTTAGGGTTTGGTGGTGA+AGG | 0.352329 | 6_1:+34778614 | Msa0883560:CDS |
| TGCAGAAAGTACAAAATAAT+AGG | 0.359843 | 6_1:-34783388 | None:intergenic |
| TGGTTAGCTGTGTAGCAAAT+TGG | 0.363370 | 6_1:-34783094 | None:intergenic |
| GTCTGAGATGGGGTTGTTTG+AGG | 0.370079 | 6_1:+34778694 | Msa0883560:CDS |
| TATATATACAACATGTTACT+TGG | 0.381317 | 6_1:-34783288 | None:intergenic |
| TTTGATGGGTTAGGGTTTGG+TGG | 0.386396 | 6_1:+34778608 | Msa0883560:CDS |
| CCCATTAAAAGAAGGATTAC+CGG | 0.390977 | 6_1:-34783063 | None:intergenic |
| TGTTGTATACGAGCTACTTT+TGG | 0.392286 | 6_1:-34783229 | None:intergenic |
| TGCACAACTTACAGTCCTTC+AGG | 0.397567 | 6_1:+34780431 | Msa0883560:CDS |
| AGAAAGAACTTCAACGCCTT+AGG | 0.400050 | 6_1:+34783012 | Msa0883560:CDS |
| CTGAGTGAGAACGGCGGTGG+TGG | 0.401141 | 6_1:-34778403 | None:intergenic |
| AAATTTGTGTTACAGTTCTC+TGG | 0.401692 | 6_1:+34783437 | Msa0883560:three_prime_UTR |
| GGGTTGTTTGAGGTTGGTGA+TGG | 0.408636 | 6_1:+34778704 | Msa0883560:CDS |
| TCGTGGTCGCTCTAACTTCA+TGG | 0.412681 | 6_1:+34783196 | Msa0883560:CDS |
| ACAGCGTCAGGGGACGGGAG+AGG | 0.412739 | 6_1:-34778503 | None:intergenic |
| TTGGAACTTGGAAGTGGTGG+TGG | 0.413409 | 6_1:-34778246 | None:intergenic |
| GTTTGGTGGTGAAGGGGAAA+AGG | 0.416147 | 6_1:+34778622 | Msa0883560:CDS |
| GAACTTGGAAGTGGTGGTGG+TGG | 0.419234 | 6_1:-34778243 | None:intergenic |
| GAGATGGGGTTGTTTGAGGT+TGG | 0.424470 | 6_1:+34778698 | Msa0883560:CDS |
| GTTAGGGTTTGGTGGTGAAG+GGG | 0.427763 | 6_1:+34778616 | Msa0883560:CDS |
| CAGCGTCAGGGGACGGGAGA+GGG | 0.430362 | 6_1:-34778502 | None:intergenic |
| CATGCCAGGTTGTGTCTGCT+GGG | 0.434483 | 6_1:-34783141 | None:intergenic |
| GAAGATACATAAAACATCAT+AGG | 0.440019 | 6_1:-34783342 | None:intergenic |
| GGTTGTGTCTGCTGGGGTTG+AGG | 0.447864 | 6_1:-34783134 | None:intergenic |
| GGTTAGGGTTTGGTGGTGAA+GGG | 0.457604 | 6_1:+34778615 | Msa0883560:CDS |
| AGGGGACGGGAGAGGGAGGT+TGG | 0.458623 | 6_1:-34778495 | None:intergenic |
| TTTGTGTTTGTGTTGGAACT+TGG | 0.461107 | 6_1:-34778258 | None:intergenic |
| GAACGAGAAGGCGGCATGCC+AGG | 0.461441 | 6_1:-34783155 | None:intergenic |
| TTATGAGTTTGTGTTTGTGT+TGG | 0.462086 | 6_1:-34778265 | None:intergenic |
| GAAAGAACTTCAACGCCTTA+GGG | 0.472203 | 6_1:+34783013 | Msa0883560:CDS |
| TCGATGGATGGGTCTGAGAT+GGG | 0.474377 | 6_1:+34778683 | Msa0883560:CDS |
| TTCGATGGATGGGTCTGAGA+TGG | 0.478441 | 6_1:+34778682 | Msa0883560:CDS |
| GGTTAGCTGTGTAGCAAATT+GGG | 0.483849 | 6_1:-34783093 | None:intergenic |
| ATCGGGACAGCGTCAGGGGA+CGG | 0.485265 | 6_1:-34778509 | None:intergenic |
| AGACACCACCTTCCGTTTCG+CGG | 0.485465 | 6_1:+34778424 | Msa0883560:CDS |
| GTGAACATCCCATTAAAAGA+AGG | 0.490376 | 6_1:-34783071 | None:intergenic |
| GGAAAAGGTTGAAGAGAGGA+AGG | 0.492873 | 6_1:+34778637 | Msa0883560:CDS |
| AAGTCAATTATAACTGGTGG+TGG | 0.495733 | 6_1:-34778353 | None:intergenic |
| GTCCCCTGACGCTGTCCCGA+TGG | 0.496675 | 6_1:+34778511 | Msa0883560:CDS |
| AGAGGAAGGTGAGTAGACAT+AGG | 0.498750 | 6_1:+34778651 | Msa0883560:CDS |
| ATCGAAGTCGGACGGGTCGA+AGG | 0.500424 | 6_1:-34778468 | None:intergenic |
| GTGTTGGAACTTGGAAGTGG+TGG | 0.505022 | 6_1:-34778249 | None:intergenic |
| AGTGGTGGTGGTGGTTGAAG+TGG | 0.505855 | 6_1:-34778234 | None:intergenic |
| AATCATTTGACTGCCGTCGC+CGG | 0.508575 | 6_1:+34783044 | Msa0883560:CDS |
| CGGTGGTGGGTCCCACGTGA+TGG | 0.512907 | 6_1:-34778389 | None:intergenic |
| AGAGCGACCACGACCGTTGA+AGG | 0.516566 | 6_1:-34783186 | None:intergenic |
| GATCAACCCTTCAACGGTCG+TGG | 0.516911 | 6_1:+34783179 | Msa0883560:CDS |
| CAACCCCAGCAGACACAACC+TGG | 0.516981 | 6_1:+34783137 | Msa0883560:CDS |
| CGTCGAAGTTTGCCGCGAAA+CGG | 0.519451 | 6_1:-34778436 | None:intergenic |
| AACTCGATATACAAGTGAGC+TGG | 0.519563 | 6_1:+34780365 | Msa0883560:CDS |
| ATGAGAATGGAACTTGACTT+TGG | 0.521390 | 6_1:-34778109 | None:intergenic |
| AGGATTACTCATTTGTTGCA+TGG | 0.522341 | 6_1:-34783114 | None:intergenic |
| CATCGGGAAGTCAGCGTCAG+AGG | 0.531841 | 6_1:+34778547 | Msa0883560:CDS |
| AAGGGGAAAAGGTTGAAGAG+AGG | 0.535836 | 6_1:+34778633 | Msa0883560:CDS |
| AACTGTAACACAAATTTCAA+AGG | 0.538774 | 6_1:-34783431 | None:intergenic |
| TGAGTGAGAACGGCGGTGGT+GGG | 0.539319 | 6_1:-34778402 | None:intergenic |
| AGTTCAGCAAGTTTCTCAGC+CGG | 0.541555 | 6_1:-34778743 | None:intergenic |
| TTTGTGTTGGAACTTGGAAG+TGG | 0.541724 | 6_1:-34778252 | None:intergenic |
| TGGACTCGTCAGAGTCCATC+GGG | 0.545195 | 6_1:-34778526 | None:intergenic |
| TGGTGGGTCCCACGTGATGG+TGG | 0.546686 | 6_1:-34778386 | None:intergenic |
| TGGAGATATCGAAGTCGGAC+GGG | 0.546734 | 6_1:-34778475 | None:intergenic |
| CGTCAGGGGACGGGAGAGGG+AGG | 0.547402 | 6_1:-34778499 | None:intergenic |
| AAGCTTTGCTTGTTGCTCGA+AGG | 0.549248 | 6_1:-34782459 | None:intergenic |
| AGGTATAGTAGTTCGATGGA+TGG | 0.550518 | 6_1:+34778671 | Msa0883560:CDS |
| ACTGTAACACAAATTTCAAA+GGG | 0.552895 | 6_1:-34783430 | None:intergenic |
| CGTTCTGATCAACCCTTCAA+CGG | 0.556715 | 6_1:+34783173 | Msa0883560:CDS |
| TCTAAGTCAATTATAACTGG+TGG | 0.559887 | 6_1:-34778356 | None:intergenic |
| AGTCCATCGGGACAGCGTCA+GGG | 0.559909 | 6_1:-34778514 | None:intergenic |
| GGAAGTCAGCGTCAGAGGGA+CGG | 0.567008 | 6_1:+34778552 | Msa0883560:CDS |
| TTTGTGTTACAGTTCTCTGG+TGG | 0.568470 | 6_1:+34783440 | Msa0883560:three_prime_UTR |
| GAGCGACCACGACCGTTGAA+GGG | 0.569915 | 6_1:-34783185 | None:intergenic |
| ATGGACTCTGACGAGTCCAT+CGG | 0.571828 | 6_1:+34778530 | Msa0883560:CDS |
| ATATATACAACATGTTACTT+GGG | 0.571912 | 6_1:-34783287 | None:intergenic |
| GGTATAGTAGTTCGATGGAT+GGG | 0.582990 | 6_1:+34778672 | Msa0883560:CDS |
| GAAGTTTGCCGCGAAACGGA+AGG | 0.589986 | 6_1:-34778432 | None:intergenic |
| CTGCTGCACGATCGAAAGAG+AGG | 0.598234 | 6_1:+34780340 | Msa0883560:CDS |
| GATATACAAGTGAGCTGGAG+AGG | 0.598508 | 6_1:+34780370 | Msa0883560:CDS |
| AGGTGGTGTCTGAGTGAGAA+CGG | 0.599071 | 6_1:-34778412 | None:intergenic |
| ACATAGGTATAGTAGTTCGA+TGG | 0.599361 | 6_1:+34778667 | Msa0883560:CDS |
| ATGGACTCGTCAGAGTCCAT+CGG | 0.599615 | 6_1:-34778527 | None:intergenic |
| CGATGGATGGGTCTGAGATG+GGG | 0.601831 | 6_1:+34778684 | Msa0883560:CDS |
| CAACAAGCAAAGCTTAGAGA+AGG | 0.603588 | 6_1:+34782467 | Msa0883560:CDS |
| TTGGAGATATCGAAGTCGGA+CGG | 0.611978 | 6_1:-34778476 | None:intergenic |
| GAAAACATGCCACCATCACG+TGG | 0.629605 | 6_1:+34778377 | Msa0883560:CDS |
| GAGGTTGGAGATATCGAAGT+CGG | 0.632312 | 6_1:-34778480 | None:intergenic |
| TGGTGTGAAGAAATCTATGC+CGG | 0.640871 | 6_1:+34778724 | Msa0883560:CDS |
| TGTCTGAGTGAGAACGGCGG+TGG | 0.649339 | 6_1:-34778406 | None:intergenic |
| AAAAGAAGGATTACCGGCGA+CGG | 0.660514 | 6_1:-34783057 | None:intergenic |
| AAGGGTTGATCAGAACGAGA+AGG | 0.660536 | 6_1:-34783167 | None:intergenic |
| GGTTGATCAGAACGAGAAGG+CGG | 0.661757 | 6_1:-34783164 | None:intergenic |
| ATGCCAGGTTGTGTCTGCTG+GGG | 0.664418 | 6_1:-34783140 | None:intergenic |
| GTTTGCCGCGAAACGGAAGG+TGG | 0.671587 | 6_1:-34778429 | None:intergenic |
| ATTCTGAGCAGTCAAATCAG+TGG | 0.697438 | 6_1:-34782411 | None:intergenic |
| GGACTGTAAGTTGTGCAGAG+AGG | 0.716589 | 6_1:-34780425 | None:intergenic |
| AAAACATGCCACCATCACGT+GGG | 0.739972 | 6_1:+34778378 | Msa0883560:CDS |
| TGGTGTCTGAGTGAGAACGG+CGG | 0.821224 | 6_1:-34778409 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTTTTAGTTTTTCTTA+TGG | + | chr6_1:34778307-34778326 | Msa0883560:exon | 10.0% |
| !! | TTATTTATGTACTAAATTTA+AGG | + | chr6_1:34778863-34778882 | Msa0883560:intron | 10.0% |
| !! | AATGAAAAAAAAAAGATAAA+AGG | + | chr6_1:34780239-34780258 | Msa0883560:intron | 10.0% |
| !! | ATGAAAAAAAAAAGATAAAA+GGG | + | chr6_1:34780240-34780259 | Msa0883560:intron | 10.0% |
| !! | ATACATAAAAATATATAGTT+TGG | + | chr6_1:34780723-34780742 | Msa0883560:intron | 10.0% |
| !! | ATATAAGTTTAATGAATATG+TGG | + | chr6_1:34778942-34778961 | Msa0883560:intron | 15.0% |
| !! | TATATGATAGAATATTATAG+CGG | + | chr6_1:34778970-34778989 | Msa0883560:intron | 15.0% |
| !! | GTAAACGTATATATAATTTA+CGG | - | chr6_1:34779560-34779579 | None:intergenic | 15.0% |
| !!! | TTATTTTGTAATGGATAATT+TGG | + | chr6_1:34779882-34779901 | Msa0883560:intron | 15.0% |
| !! | AAAAAACATCTTAAAACAAA+GGG | - | chr6_1:34779936-34779955 | None:intergenic | 15.0% |
| !!! | CATAAATTTGATTTTATTTC+TGG | - | chr6_1:34781515-34781534 | None:intergenic | 15.0% |
| !! | TTTGAAAAAGACATATAAAT+AGG | - | chr6_1:34781730-34781749 | None:intergenic | 15.0% |
| !!! | ACAAAATTTAGTAATTTTCT+TGG | + | chr6_1:34781841-34781860 | Msa0883560:intron | 15.0% |
| !!! | TTTTCTAAGTCAATTATAAC+TGG | - | chr6_1:34778362-34778381 | None:intergenic | 20.0% |
| !! | AAATTGTATGTGTTTATGAT+CGG | + | chr6_1:34779193-34779212 | Msa0883560:intron | 20.0% |
| !!! | ATGTGTCTTTTATTTTGTAA+TGG | + | chr6_1:34779873-34779892 | Msa0883560:intron | 20.0% |
| !! | GAAAAAACATCTTAAAACAA+AGG | - | chr6_1:34779937-34779956 | None:intergenic | 20.0% |
| !! | GACTAAAATTCTATATATGT+TGG | - | chr6_1:34780064-34780083 | None:intergenic | 20.0% |
| !! | AAATCTATCATTGTTAAAGA+TGG | - | chr6_1:34780558-34780577 | None:intergenic | 20.0% |
| !!! | AAAAAAAAACCTTTTTATCC+TGG | - | chr6_1:34781199-34781218 | None:intergenic | 20.0% |
| !! | AAGATACTGTGATTAATTTA+TGG | - | chr6_1:34781603-34781622 | None:intergenic | 20.0% |
| !! | AACAAGATGATAAATAGTTT+AGG | + | chr6_1:34781790-34781809 | Msa0883560:intron | 20.0% |
| !! | TAAATAGTTTAGGCTATTAT+AGG | + | chr6_1:34781800-34781819 | Msa0883560:intron | 20.0% |
| !! | ATTACATAGAAGTAACTAAA+TGG | - | chr6_1:34781932-34781951 | None:intergenic | 20.0% |
| !! | AAATGTGCAAAAGAATAAAA+AGG | + | chr6_1:34782351-34782370 | Msa0883560:intron | 20.0% |
| !! | TTCAATAAAGATGTGATAAA+GGG | - | chr6_1:34782543-34782562 | None:intergenic | 20.0% |
| !! | ATTCAATAAAGATGTGATAA+AGG | - | chr6_1:34782544-34782563 | None:intergenic | 20.0% |
| !! | TTATCACATCTTTATTGAAT+TGG | + | chr6_1:34782544-34782563 | Msa0883560:intron | 20.0% |
| !!! | TTTGTAGCATAGTTTTAAAA+AGG | - | chr6_1:34782651-34782670 | None:intergenic | 20.0% |
| !! | TTACCATTTAAATATGAACA+TGG | + | chr6_1:34782952-34782971 | Msa0883560:intron | 20.0% |
| !!! | ATATATACAACATGTTACTT+GGG | - | chr6_1:34783290-34783309 | None:intergenic | 20.0% |
| !! | TATATATACAACATGTTACT+TGG | - | chr6_1:34783291-34783310 | None:intergenic | 20.0% |
| !! | ATAAAACATCATAGGATTAA+AGG | - | chr6_1:34783337-34783356 | None:intergenic | 20.0% |
| !!! | AAAAAGTGTTGTAATGAGAA+TGG | - | chr6_1:34778125-34778144 | None:intergenic | 25.0% |
| !!! | TTGATTCAGAGTTTTTTGAT+GGG | + | chr6_1:34778594-34778613 | Msa0883560:CDS | 25.0% |
| !!! | TCACTTTTTGAAGTTTGTTT+TGG | + | chr6_1:34778828-34778847 | Msa0883560:intron | 25.0% |
| ! | GTTAAGAAACATTGAGTTTA+GGG | + | chr6_1:34779083-34779102 | Msa0883560:intron | 25.0% |
| !! | ACTTTTCTTAAAGTTTTTCC+AGG | - | chr6_1:34779310-34779329 | None:intergenic | 25.0% |
| ! | TTAATAAACCATCGTAAGTA+GGG | - | chr6_1:34779707-34779726 | None:intergenic | 25.0% |
| ! | TTTAATAAACCATCGTAAGT+AGG | - | chr6_1:34779708-34779727 | None:intergenic | 25.0% |
| ! | ATCAAATTCACAAACACAAT+TGG | - | chr6_1:34779826-34779845 | None:intergenic | 25.0% |
| ! | TGTTAAATTGATTGTGTTTG+TGG | + | chr6_1:34779978-34779997 | Msa0883560:intron | 25.0% |
| !!! | AAAAAAGATAAAAGGGTGTT+TGG | + | chr6_1:34780247-34780266 | Msa0883560:intron | 25.0% |
| ! | TGTTTGGATTATGTAGAATT+TGG | + | chr6_1:34780263-34780282 | Msa0883560:intron | 25.0% |
| ! | AATGTTGTATGTTTGTTTAC+AGG | + | chr6_1:34780298-34780317 | Msa0883560:intron | 25.0% |
| ! | ATGCAATCATAATCAAAATG+AGG | - | chr6_1:34781008-34781027 | None:intergenic | 25.0% |
| !! | TTTTCAAAACGTAGAAAGTA+GGG | - | chr6_1:34781091-34781110 | None:intergenic | 25.0% |
| ! | TAAGTCAAGGAAAATAAGAT+TGG | - | chr6_1:34781240-34781259 | None:intergenic | 25.0% |
| !!! | ATCTTTTAGTTAGGAAAACA+TGG | - | chr6_1:34781311-34781330 | None:intergenic | 25.0% |
| !! | CCATATCGTATAAGATTTTT+CGG | + | chr6_1:34781401-34781420 | Msa0883560:intron | 25.0% |
| !! | CTTTTTATATGCCAATTTTG+TGG | + | chr6_1:34781620-34781639 | Msa0883560:intron | 25.0% |
| ! | AAAAATATCTGTCTTAAGGA+TGG | - | chr6_1:34782106-34782125 | None:intergenic | 25.0% |
| ! | ACTCAAAAATATCTGTCTTA+AGG | - | chr6_1:34782110-34782129 | None:intergenic | 25.0% |
| !!! | ACAGATATTTTTGAGTAAAG+TGG | + | chr6_1:34782114-34782133 | Msa0883560:intron | 25.0% |
| ! | CATCTAAAAATCACATGTAA+AGG | - | chr6_1:34782211-34782230 | None:intergenic | 25.0% |
| !!! | CTTTACATGTGATTTTTAGA+TGG | + | chr6_1:34782209-34782228 | Msa0883560:intron | 25.0% |
| ! | ATCATAGATATTTGATGAGT+TGG | - | chr6_1:34782254-34782273 | None:intergenic | 25.0% |
| ! | TTTCTTGATCCATAAAAAAG+TGG | + | chr6_1:34782506-34782525 | Msa0883560:intron | 25.0% |
| ! | TCAATAAAGATGTGATAAAG+GGG | - | chr6_1:34782542-34782561 | None:intergenic | 25.0% |
| !! | TATTGAATTGGACTAGAAAA+AGG | + | chr6_1:34782556-34782575 | Msa0883560:intron | 25.0% |
| ! | TAAAACTATGCTACAAAAGT+TGG | + | chr6_1:34782654-34782673 | Msa0883560:intron | 25.0% |
| !! | TTTTGCATCATTTACGATTT+TGG | + | chr6_1:34782702-34782721 | Msa0883560:intron | 25.0% |
| !! | TCGGATATTTTCAAAACTAA+GGG | - | chr6_1:34782729-34782748 | None:intergenic | 25.0% |
| !! | ATCGGATATTTTCAAAACTA+AGG | - | chr6_1:34782730-34782749 | None:intergenic | 25.0% |
| ! | TAGATTAGATAGGGAAAAAT+CGG | - | chr6_1:34782748-34782767 | None:intergenic | 25.0% |
| ! | TTTCCCTATCTAATCTATTT+AGG | + | chr6_1:34782751-34782770 | Msa0883560:intron | 25.0% |
| ! | TTCCCTATCTAATCTATTTA+GGG | + | chr6_1:34782752-34782771 | Msa0883560:intron | 25.0% |
| ! | ATCCCTAAATAGATTAGATA+GGG | - | chr6_1:34782757-34782776 | None:intergenic | 25.0% |
| !!! | GTTGCTTTTGTGATATAAAT+CGG | + | chr6_1:34782835-34782854 | Msa0883560:intron | 25.0% |
| ! | TTCAAGCAATGATATTTCTT+TGG | - | chr6_1:34782890-34782909 | None:intergenic | 25.0% |
| ! | TAGCCATGTTCATATTTAAA+TGG | - | chr6_1:34782958-34782977 | None:intergenic | 25.0% |
| ! | GAAGATACATAAAACATCAT+AGG | - | chr6_1:34783345-34783364 | None:intergenic | 25.0% |
| ! | TATGTATCTTCTACAGTTTA+AGG | + | chr6_1:34783354-34783373 | Msa0883560:three_prime_UTR | 25.0% |
| !! | TGCAGAAAGTACAAAATAAT+AGG | - | chr6_1:34783391-34783410 | None:intergenic | 25.0% |
| ! | ACTGTAACACAAATTTCAAA+GGG | - | chr6_1:34783433-34783452 | None:intergenic | 25.0% |
| ! | AACTGTAACACAAATTTCAA+AGG | - | chr6_1:34783434-34783453 | None:intergenic | 25.0% |
| AAGACAATTTCCTCATCTTT+AGG | + | chr6_1:34778077-34778096 | Msa0883560:five_prime_UTR | 30.0% | |
| !!! | GTTTTGTTTACCTAAAGATG+AGG | - | chr6_1:34778090-34778109 | None:intergenic | 30.0% |
| TTATGAGTTTGTGTTTGTGT+TGG | - | chr6_1:34778268-34778287 | None:intergenic | 30.0% | |
| TCTAAGTCAATTATAACTGG+TGG | - | chr6_1:34778359-34778378 | None:intergenic | 30.0% | |
| !!! | GTTGATTCAGAGTTTTTTGA+TGG | + | chr6_1:34778593-34778612 | Msa0883560:CDS | 30.0% |
| !!! | ATAAACCTTTTAGCTCTCTT+AGG | - | chr6_1:34778782-34778801 | None:intergenic | 30.0% |
| GGTTAAGAAACATTGAGTTT+AGG | + | chr6_1:34779082-34779101 | Msa0883560:intron | 30.0% | |
| AGAGAGAAGATTATGTAGTT+AGG | + | chr6_1:34779236-34779255 | Msa0883560:intron | 30.0% | |
| TGTCAAATTACTACAAGTAG+AGG | + | chr6_1:34779280-34779299 | Msa0883560:intron | 30.0% | |
| ! | TTTACCTAATTTGTGAGTCA+TGG | + | chr6_1:34779575-34779594 | Msa0883560:intron | 30.0% |
| TTAACCATGACTCACAAATT+AGG | - | chr6_1:34779582-34779601 | None:intergenic | 30.0% | |
| CGATTCTAAGTTTAGAAGTT+TGG | + | chr6_1:34779750-34779769 | Msa0883560:intron | 30.0% | |
| ! | AAGTTTAGAAGTTTGGAATC+TGG | + | chr6_1:34779757-34779776 | Msa0883560:intron | 30.0% |
| GGAAGTTAATCCTATACATA+TGG | + | chr6_1:34779778-34779797 | Msa0883560:intron | 30.0% | |
| TCCTATACATATGGAATTTC+TGG | + | chr6_1:34779787-34779806 | Msa0883560:intron | 30.0% | |
| ACCAGAAATTCCATATGTAT+AGG | - | chr6_1:34779791-34779810 | None:intergenic | 30.0% | |
| !! | TTGTGGTTGATTCTAAGATT+AGG | + | chr6_1:34779995-34780014 | Msa0883560:intron | 30.0% |
| !! | TGTGGTTGATTCTAAGATTA+GGG | + | chr6_1:34779996-34780015 | Msa0883560:intron | 30.0% |
| ! | AAGATTAGGGGTTTGAATTT+TGG | + | chr6_1:34780009-34780028 | Msa0883560:intron | 30.0% |
| ! | TTTTGGACCTATATTTCAGA+TGG | + | chr6_1:34780026-34780045 | Msa0883560:intron | 30.0% |
| ! | GGATTAACCATCTGAAATAT+AGG | - | chr6_1:34780036-34780055 | None:intergenic | 30.0% |
| TATTTCAGATGGTTAATCCT+AGG | + | chr6_1:34780037-34780056 | Msa0883560:intron | 30.0% | |
| ATTCTATATATGTTGGTCCT+AGG | - | chr6_1:34780057-34780076 | None:intergenic | 30.0% | |
| TTTACAGGATTCTTGCTAAT+AGG | + | chr6_1:34780313-34780332 | Msa0883560:intron | 30.0% | |
| AAAGGAAATAACATACCTGA+AGG | - | chr6_1:34780449-34780468 | None:intergenic | 30.0% | |
| TTCAGAACAGTGAAATGAAA+AGG | - | chr6_1:34780467-34780486 | None:intergenic | 30.0% | |
| TGTTTGTAACATGTTCTTGT+TGG | + | chr6_1:34780516-34780535 | Msa0883560:intron | 30.0% | |
| CTATCATTGTTAAAGATGGA+GGG | - | chr6_1:34780554-34780573 | None:intergenic | 30.0% | |
| TCTATCATTGTTAAAGATGG+AGG | - | chr6_1:34780555-34780574 | None:intergenic | 30.0% | |
| GGTAGGTATTTATGTCTATA+TGG | + | chr6_1:34780670-34780689 | Msa0883560:intron | 30.0% | |
| GGTTGTAACGCAAAATATAT+AGG | - | chr6_1:34780778-34780797 | None:intergenic | 30.0% | |
| ! | GTAATCATATGTGTCGATAT+CGG | - | chr6_1:34780860-34780879 | None:intergenic | 30.0% |
| TCTAAGTGTTCTATGAAATG+AGG | + | chr6_1:34780904-34780923 | Msa0883560:intron | 30.0% | |
| !! | TTAAGCAGTTTCAGGTTAAA+TGG | - | chr6_1:34780967-34780986 | None:intergenic | 30.0% |
| ! | CTTTTCAAAACGTAGAAAGT+AGG | - | chr6_1:34781092-34781111 | None:intergenic | 30.0% |
| ! | TCCACAAAATTTTACGTAGA+TGG | + | chr6_1:34781166-34781185 | Msa0883560:intron | 30.0% |
| ! | ACCATCTACGTAAAATTTTG+TGG | - | chr6_1:34781170-34781189 | None:intergenic | 30.0% |
| TCAAGGAAAATAAGATTGGA+TGG | - | chr6_1:34781236-34781255 | None:intergenic | 30.0% | |
| ATGATTGTATAGCTAAGTCA+AGG | - | chr6_1:34781253-34781272 | None:intergenic | 30.0% | |
| CAATCATGCTTACGAAAAAT+CGG | + | chr6_1:34781266-34781285 | Msa0883560:intron | 30.0% | |
| AATCTTATACGATATGGTGA+AGG | - | chr6_1:34781398-34781417 | None:intergenic | 30.0% | |
| CCGAAAAATCTTATACGATA+TGG | - | chr6_1:34781404-34781423 | None:intergenic | 30.0% | |
| TATGTAACAACTAACTGTAG+TGG | + | chr6_1:34781531-34781550 | Msa0883560:intron | 30.0% | |
| TCATCACAATACCACAAAAT+TGG | - | chr6_1:34781634-34781653 | None:intergenic | 30.0% | |
| TTCTACTAAAGTGACGTAAA+AGG | - | chr6_1:34781694-34781713 | None:intergenic | 30.0% | |
| CTTAAAACGACAACTACAAA+GGG | + | chr6_1:34781877-34781896 | Msa0883560:intron | 30.0% | |
| TTAAAACGACAACTACAAAG+GGG | + | chr6_1:34781878-34781897 | Msa0883560:intron | 30.0% | |
| GTTACTTCTATGTAATACAG+TGG | + | chr6_1:34781936-34781955 | Msa0883560:intron | 30.0% | |
| TATGTAATCCAACAAACCAA+GGG | - | chr6_1:34782170-34782189 | None:intergenic | 30.0% | |
| ATATGTAATCCAACAAACCA+AGG | - | chr6_1:34782171-34782190 | None:intergenic | 30.0% | |
| !! | CATGTGATTTTTAGATGGAT+AGG | + | chr6_1:34782214-34782233 | Msa0883560:intron | 30.0% |
| !!! | AAGCAAAGTCCACTTTTTTA+TGG | - | chr6_1:34782518-34782537 | None:intergenic | 30.0% |
| CAATAAAGATGTGATAAAGG+GGG | - | chr6_1:34782541-34782560 | None:intergenic | 30.0% | |
| !! | AGTTGGCTTAAATACAGTTT+TGG | + | chr6_1:34782671-34782690 | Msa0883560:intron | 30.0% |
| CATCCCTAAATAGATTAGAT+AGG | - | chr6_1:34782758-34782777 | None:intergenic | 30.0% | |
| CAACATCAAAGTAGATGATT+TGG | + | chr6_1:34783247-34783266 | Msa0883560:three_prime_UTR | 30.0% | |
| AAATTTGTGTTACAGTTCTC+TGG | + | chr6_1:34783437-34783456 | Msa0883560:three_prime_UTR | 30.0% | |
| ATGAGAATGGAACTTGACTT+TGG | - | chr6_1:34778112-34778131 | None:intergenic | 35.0% | |
| TTTGTGTTTGTGTTGGAACT+TGG | - | chr6_1:34778261-34778280 | None:intergenic | 35.0% | |
| ! | GGTTTTCTTGTGAAGTTGTT+TGG | - | chr6_1:34778335-34778354 | None:intergenic | 35.0% |
| AAGTCAATTATAACTGGTGG+TGG | - | chr6_1:34778356-34778375 | None:intergenic | 35.0% | |
| !!! | TCAGAGTTTTTTGATGGGTT+AGG | + | chr6_1:34778599-34778618 | Msa0883560:CDS | 35.0% |
| !!! | CAGAGTTTTTTGATGGGTTA+GGG | + | chr6_1:34778600-34778619 | Msa0883560:CDS | 35.0% |
| !!! | TTTTTTGATGGGTTAGGGTT+TGG | + | chr6_1:34778605-34778624 | Msa0883560:CDS | 35.0% |
| ACATAGGTATAGTAGTTCGA+TGG | + | chr6_1:34778667-34778686 | Msa0883560:CDS | 35.0% | |
| TTGATCCTAAGAGAGCTAAA+AGG | + | chr6_1:34778774-34778793 | Msa0883560:CDS | 35.0% | |
| ! | AAGTCTTATCCTACTATCTC+AGG | - | chr6_1:34779016-34779035 | None:intergenic | 35.0% |
| TGAGATAGTAGGATAAGACT+TGG | + | chr6_1:34779015-34779034 | Msa0883560:intron | 35.0% | |
| ! | GTGACTTAATTTGACTCAGT+TGG | + | chr6_1:34779061-34779080 | Msa0883560:intron | 35.0% |
| AAGAAACATTGAGTTTAGGG+TGG | + | chr6_1:34779086-34779105 | Msa0883560:intron | 35.0% | |
| ! | AGAAACATTGAGTTTAGGGT+GGG | + | chr6_1:34779087-34779106 | Msa0883560:intron | 35.0% |
| TAAAGAAACCATCGCGAATA+GGG | - | chr6_1:34779170-34779189 | None:intergenic | 35.0% | |
| TTAAAGAAACCATCGCGAAT+AGG | - | chr6_1:34779171-34779190 | None:intergenic | 35.0% | |
| ! | TATGTGTTTATGATCGGCTT+AGG | + | chr6_1:34779199-34779218 | Msa0883560:intron | 35.0% |
| ! | ATGTGTTTATGATCGGCTTA+GGG | + | chr6_1:34779200-34779219 | Msa0883560:intron | 35.0% |
| AGTTAGGAGAGTAAATCAGA+TGG | + | chr6_1:34779252-34779271 | Msa0883560:intron | 35.0% | |
| AGTCTCTAACTGAAGTTTGT+CGG | + | chr6_1:34779513-34779532 | Msa0883560:intron | 35.0% | |
| ATTTGTGAGTCATGGTTAAG+CGG | + | chr6_1:34779583-34779602 | Msa0883560:intron | 35.0% | |
| AGTCTCGTACTAAAGTTTCT+TGG | + | chr6_1:34779650-34779669 | Msa0883560:intron | 35.0% | |
| GTCTCGTACTAAAGTTTCTT+GGG | + | chr6_1:34779651-34779670 | Msa0883560:intron | 35.0% | |
| !! | GTGGTTGATTCTAAGATTAG+GGG | + | chr6_1:34779997-34780016 | Msa0883560:intron | 35.0% |
| TTGTAACATGTTCTTGTTGG+TGG | + | chr6_1:34780519-34780538 | Msa0883560:intron | 35.0% | |
| !! | ATGTTCTTGTTGGTGGTTTA+TGG | + | chr6_1:34780526-34780545 | Msa0883560:intron | 35.0% |
| !!! | CTGTTTGATTTTGAGTTGTG+CGG | + | chr6_1:34780582-34780601 | Msa0883560:intron | 35.0% |
| GCATATCCTTGGTATTATGT+GGG | - | chr6_1:34780626-34780645 | None:intergenic | 35.0% | |
| TGCATATCCTTGGTATTATG+TGG | - | chr6_1:34780627-34780646 | None:intergenic | 35.0% | |
| ATGCATGTATGCATGTGTAT+AGG | + | chr6_1:34780642-34780661 | Msa0883560:intron | 35.0% | |
| TATGCATGTGTATAGGTACT+AGG | + | chr6_1:34780649-34780668 | Msa0883560:intron | 35.0% | |
| GTTTCAGATTAAGCAGTTTC+AGG | - | chr6_1:34780975-34780994 | None:intergenic | 35.0% | |
| ! | ATTATCCGTCTTCTGTTTTG+TGG | + | chr6_1:34781026-34781045 | Msa0883560:intron | 35.0% |
| CTAAACCACAAAACAGAAGA+CGG | - | chr6_1:34781034-34781053 | None:intergenic | 35.0% | |
| TGGAAATACAAGCACGAAAT+TGG | - | chr6_1:34781150-34781169 | None:intergenic | 35.0% | |
| ! | AATTTTACGTAGATGGTCCT+AGG | + | chr6_1:34781173-34781192 | Msa0883560:intron | 35.0% |
| !! | CTGCAGTACATCTTTTAGTT+AGG | - | chr6_1:34781320-34781339 | None:intergenic | 35.0% |
| TGAAGGCTCGACTTATAATT+AGG | - | chr6_1:34781381-34781400 | None:intergenic | 35.0% | |
| CCTACTTCAACGATGTAAAA+TGG | - | chr6_1:34781430-34781449 | None:intergenic | 35.0% | |
| ! | CCATTTTACATCGTTGAAGT+AGG | + | chr6_1:34781427-34781446 | Msa0883560:intron | 35.0% |
| TTTACATCGTTGAAGTAGGT+TGG | + | chr6_1:34781431-34781450 | Msa0883560:intron | 35.0% | |
| ! | TTTTCTGATCCATAATCCGA+TGG | + | chr6_1:34781458-34781477 | Msa0883560:intron | 35.0% |
| !!! | CCTTTGTAGTTGTCGTTTTA+AGG | - | chr6_1:34781879-34781898 | None:intergenic | 35.0% |
| CCTTAAAACGACAACTACAA+AGG | + | chr6_1:34781876-34781895 | Msa0883560:intron | 35.0% | |
| TGACTAGTGACTATGTTAGA+GGG | + | chr6_1:34781981-34782000 | Msa0883560:intron | 35.0% | |
| GAGTAAAGTGGTAATTATCC+AGG | + | chr6_1:34782126-34782145 | Msa0883560:intron | 35.0% | |
| ATGTAATCCAACAAACCAAG+GGG | - | chr6_1:34782169-34782188 | None:intergenic | 35.0% | |
| !! | GTGATTTTTAGATGGATAGG+TGG | + | chr6_1:34782217-34782236 | Msa0883560:intron | 35.0% |
| ! | AGATATTTGATGAGTTGGAG+TGG | - | chr6_1:34782249-34782268 | None:intergenic | 35.0% |
| TGATTTGACTGCTCAGAATA+AGG | + | chr6_1:34782415-34782434 | Msa0883560:CDS | 35.0% | |
| CGTAAATGATGCAAAATAGC+AGG | - | chr6_1:34782698-34782717 | None:intergenic | 35.0% | |
| !! | GCAAAAGTGTTTCGCAAAAA+TGG | - | chr6_1:34782919-34782938 | None:intergenic | 35.0% |
| CCCATTAAAAGAAGGATTAC+CGG | - | chr6_1:34783066-34783085 | None:intergenic | 35.0% | |
| ! | CCGGTAATCCTTCTTTTAAT+GGG | + | chr6_1:34783063-34783082 | Msa0883560:CDS | 35.0% |
| GTGAACATCCCATTAAAAGA+AGG | - | chr6_1:34783074-34783093 | None:intergenic | 35.0% | |
| ! | AGGATTACTCATTTGTTGCA+TGG | - | chr6_1:34783117-34783136 | None:intergenic | 35.0% |
| !! | TGTTGTATACGAGCTACTTT+TGG | - | chr6_1:34783232-34783251 | None:intergenic | 35.0% |
| TTTGTGTTGGAACTTGGAAG+TGG | - | chr6_1:34778255-34778274 | None:intergenic | 40.0% | |
| AGGTATAGTAGTTCGATGGA+TGG | + | chr6_1:34778671-34778690 | Msa0883560:CDS | 40.0% | |
| GGTATAGTAGTTCGATGGAT+GGG | + | chr6_1:34778672-34778691 | Msa0883560:CDS | 40.0% | |
| TGGTGTGAAGAAATCTATGC+CGG | + | chr6_1:34778724-34778743 | Msa0883560:CDS | 40.0% | |
| ! | GAAACATTGAGTTTAGGGTG+GGG | + | chr6_1:34779088-34779107 | Msa0883560:intron | 40.0% |
| ! | AAACATTGAGTTTAGGGTGG+GGG | + | chr6_1:34779089-34779108 | Msa0883560:intron | 40.0% |
| ! | TGTGTTTATGATCGGCTTAG+GGG | + | chr6_1:34779201-34779220 | Msa0883560:intron | 40.0% |
| TAGGAGAGTAAATCAGATGG+AGG | + | chr6_1:34779255-34779274 | Msa0883560:intron | 40.0% | |
| AGGAGAGTAAATCAGATGGA+GGG | + | chr6_1:34779256-34779275 | Msa0883560:intron | 40.0% | |
| ATGTAGTTTACCCCACTTAG+TGG | + | chr6_1:34779380-34779399 | Msa0883560:intron | 40.0% | |
| TGTAGTTTACCCCACTTAGT+GGG | + | chr6_1:34779381-34779400 | Msa0883560:intron | 40.0% | |
| AACTGTAATCCCACTAAGTG+GGG | - | chr6_1:34779393-34779412 | None:intergenic | 40.0% | |
| CAACTGTAATCCCACTAAGT+GGG | - | chr6_1:34779394-34779413 | None:intergenic | 40.0% | |
| TCAACTGTAATCCCACTAAG+TGG | - | chr6_1:34779395-34779414 | None:intergenic | 40.0% | |
| GTCTCTAACTGAAGTTTGTC+GGG | + | chr6_1:34779514-34779533 | Msa0883560:intron | 40.0% | |
| ! | TTAAGCGGTGTTGAGTTTGT+GGG | + | chr6_1:34779598-34779617 | Msa0883560:intron | 40.0% |
| GTCAAATACCCTACTTACGA+TGG | + | chr6_1:34779696-34779715 | Msa0883560:intron | 40.0% | |
| AACTCGATATACAAGTGAGC+TGG | + | chr6_1:34780365-34780384 | Msa0883560:CDS | 40.0% | |
| TGTGCGGTCATAACTGTTTA+TGG | + | chr6_1:34780598-34780617 | Msa0883560:intron | 40.0% | |
| ATGGAACCCACATAATACCA+AGG | + | chr6_1:34780617-34780636 | Msa0883560:intron | 40.0% | |
| CATGCATACATGCATATCCT+TGG | - | chr6_1:34780637-34780656 | None:intergenic | 40.0% | |
| CATGTGTATAGGTACTAGGT+AGG | + | chr6_1:34780653-34780672 | Msa0883560:intron | 40.0% | |
| TACTGGTACCAAACATGTGT+CGG | + | chr6_1:34780831-34780850 | Msa0883560:intron | 40.0% | |
| TGGTTCACAATCAGAATCAG+TGG | - | chr6_1:34780947-34780966 | None:intergenic | 40.0% | |
| ! | AAACCTTTTTATCCTGGCCT+AGG | - | chr6_1:34781193-34781212 | None:intergenic | 40.0% |
| AGTGACGTAAAAGGATCAGA+TGG | - | chr6_1:34781685-34781704 | None:intergenic | 40.0% | |
| AGTCACTAGTCAGAAAACTC+AGG | - | chr6_1:34781973-34781992 | None:intergenic | 40.0% | |
| CTGACTAGTGACTATGTTAG+AGG | + | chr6_1:34781980-34781999 | Msa0883560:intron | 40.0% | |
| AGGGCTTTCTTCCATAATAC+TGG | + | chr6_1:34782000-34782019 | Msa0883560:intron | 40.0% | |
| GGGCTTTCTTCCATAATACT+GGG | + | chr6_1:34782001-34782020 | Msa0883560:intron | 40.0% | |
| TCCATAATACTGGGAGAGAT+TGG | + | chr6_1:34782010-34782029 | Msa0883560:intron | 40.0% | |
| ATTCTGAGCAGTCAAATCAG+TGG | - | chr6_1:34782414-34782433 | None:intergenic | 40.0% | |
| CAACAAGCAAAGCTTAGAGA+AGG | + | chr6_1:34782467-34782486 | Msa0883560:CDS | 40.0% | |
| CAAGTGTGACATTGTCTAAG+TGG | - | chr6_1:34782808-34782827 | None:intergenic | 40.0% | |
| AGAAAGAACTTCAACGCCTT+AGG | + | chr6_1:34783012-34783031 | Msa0883560:CDS | 40.0% | |
| GAAAGAACTTCAACGCCTTA+GGG | + | chr6_1:34783013-34783032 | Msa0883560:CDS | 40.0% | |
| ! | AATGATTCTTTTGCGCCCTA+AGG | - | chr6_1:34783031-34783050 | None:intergenic | 40.0% |
| ! | GCCGGTAATCCTTCTTTTAA+TGG | + | chr6_1:34783062-34783081 | Msa0883560:CDS | 40.0% |
| ! | GGTTAGCTGTGTAGCAAATT+GGG | - | chr6_1:34783096-34783115 | None:intergenic | 40.0% |
| ! | TGGTTAGCTGTGTAGCAAAT+TGG | - | chr6_1:34783097-34783116 | None:intergenic | 40.0% |
| TTTGTGTTACAGTTCTCTGG+TGG | + | chr6_1:34783440-34783459 | Msa0883560:three_prime_UTR | 40.0% | |
| !!! | GAGAGAGTTTTCAGGTGGTT+GGG | - | chr6_1:34778195-34778214 | None:intergenic | 45.0% |
| !!! | AGAGAGAGTTTTCAGGTGGT+TGG | - | chr6_1:34778196-34778215 | None:intergenic | 45.0% |
| !! | AGAGAGAGAGAGTTTTCAGG+TGG | - | chr6_1:34778200-34778219 | None:intergenic | 45.0% |
| ! | GAGAGAGAGAGAGAGTTTTC+AGG | - | chr6_1:34778203-34778222 | None:intergenic | 45.0% |
| AAAACATGCCACCATCACGT+GGG | + | chr6_1:34778378-34778397 | Msa0883560:CDS | 45.0% | |
| TTGGAGATATCGAAGTCGGA+CGG | - | chr6_1:34778479-34778498 | None:intergenic | 45.0% | |
| GAGGTTGGAGATATCGAAGT+CGG | - | chr6_1:34778483-34778502 | None:intergenic | 45.0% | |
| !! | TTTGATGGGTTAGGGTTTGG+TGG | + | chr6_1:34778608-34778627 | Msa0883560:CDS | 45.0% |
| AAGGGGAAAAGGTTGAAGAG+AGG | + | chr6_1:34778633-34778652 | Msa0883560:CDS | 45.0% | |
| GGAAAAGGTTGAAGAGAGGA+AGG | + | chr6_1:34778637-34778656 | Msa0883560:CDS | 45.0% | |
| AGAGGAAGGTGAGTAGACAT+AGG | + | chr6_1:34778651-34778670 | Msa0883560:CDS | 45.0% | |
| AGTTCAGCAAGTTTCTCAGC+CGG | - | chr6_1:34778746-34778765 | None:intergenic | 45.0% | |
| ACTATCTCAGGTCAGCTACA+CGG | - | chr6_1:34779004-34779023 | None:intergenic | 45.0% | |
| TGTAGCTGACCTGAGATAGT+AGG | + | chr6_1:34779004-34779023 | Msa0883560:intron | 45.0% | |
| ! | AACATTGAGTTTAGGGTGGG+GGG | + | chr6_1:34779090-34779109 | Msa0883560:intron | 45.0% |
| !! | GATTTGTTGGGGGTACTCTA+AGG | + | chr6_1:34779125-34779144 | Msa0883560:intron | 45.0% |
| ! | GTGTTTATGATCGGCTTAGG+GGG | + | chr6_1:34779202-34779221 | Msa0883560:intron | 45.0% |
| ACTACAAGTAGAGGAAGACC+TGG | + | chr6_1:34779289-34779308 | Msa0883560:intron | 45.0% | |
| TGTAGCCAATCTCTGTGACT+CGG | + | chr6_1:34779427-34779446 | Msa0883560:intron | 45.0% | |
| GTTAAGCGACACTCAGTTTG+TGG | + | chr6_1:34779453-34779472 | Msa0883560:intron | 45.0% | |
| AAGTTTGTCGGGATACTCTG+AGG | + | chr6_1:34779525-34779544 | Msa0883560:intron | 45.0% | |
| ! | GTTAAGCGGTGTTGAGTTTG+TGG | + | chr6_1:34779597-34779616 | Msa0883560:intron | 45.0% |
| GGATACTATGACGAGCATCT+GGG | + | chr6_1:34779672-34779691 | Msa0883560:intron | 45.0% | |
| GATATACAAGTGAGCTGGAG+AGG | + | chr6_1:34780370-34780389 | Msa0883560:CDS | 45.0% | |
| TGCACAACTTACAGTCCTTC+AGG | + | chr6_1:34780431-34780450 | Msa0883560:CDS | 45.0% | |
| TCCTCAGGTTAGGTTTGTAC+TGG | + | chr6_1:34780814-34780833 | Msa0883560:intron | 45.0% | |
| ACCAGTACAAACCTAACCTG+AGG | - | chr6_1:34780818-34780837 | None:intergenic | 45.0% | |
| !! | AAAGGAGTGCCATCGGATTA+TGG | - | chr6_1:34781470-34781489 | None:intergenic | 45.0% |
| ACTACAAAGGGGAGCAATGT+CGG | + | chr6_1:34781889-34781908 | Msa0883560:intron | 45.0% | |
| GAGCAATGTCGGAATTCTCA+AGG | + | chr6_1:34781900-34781919 | Msa0883560:intron | 45.0% | |
| GCCAATCTCTCCCAGTATTA+TGG | - | chr6_1:34782014-34782033 | None:intergenic | 45.0% | |
| ATCCAGGCATTCAATCCACA+TGG | + | chr6_1:34782142-34782161 | Msa0883560:intron | 45.0% | |
| TGAAATTAACAGCGTGCGAG+AGG | - | chr6_1:34782314-34782333 | None:intergenic | 45.0% | |
| ! | AAGCTTTGCTTGTTGCTCGA+AGG | - | chr6_1:34782462-34782481 | None:intergenic | 45.0% |
| AAAAGAAGGATTACCGGCGA+CGG | - | chr6_1:34783060-34783079 | None:intergenic | 45.0% | |
| ! | AAGGGTTGATCAGAACGAGA+AGG | - | chr6_1:34783170-34783189 | None:intergenic | 45.0% |
| CGTTCTGATCAACCCTTCAA+CGG | + | chr6_1:34783173-34783192 | Msa0883560:CDS | 45.0% | |
| TTGGAACTTGGAAGTGGTGG+TGG | - | chr6_1:34778249-34778268 | None:intergenic | 50.0% | |
| GTGTTGGAACTTGGAAGTGG+TGG | - | chr6_1:34778252-34778271 | None:intergenic | 50.0% | |
| GAAAACATGCCACCATCACG+TGG | + | chr6_1:34778377-34778396 | Msa0883560:CDS | 50.0% | |
| AGGTGGTGTCTGAGTGAGAA+CGG | - | chr6_1:34778415-34778434 | None:intergenic | 50.0% | |
| TGGAGATATCGAAGTCGGAC+GGG | - | chr6_1:34778478-34778497 | None:intergenic | 50.0% | |
| ATGGACTCGTCAGAGTCCAT+CGG | - | chr6_1:34778530-34778549 | None:intergenic | 50.0% | |
| ATGGACTCTGACGAGTCCAT+CGG | + | chr6_1:34778530-34778549 | Msa0883560:CDS | 50.0% | |
| !! | GGTTAGGGTTTGGTGGTGAA+GGG | + | chr6_1:34778615-34778634 | Msa0883560:CDS | 50.0% |
| !! | GTTAGGGTTTGGTGGTGAAG+GGG | + | chr6_1:34778616-34778635 | Msa0883560:CDS | 50.0% |
| !! | GTTTGGTGGTGAAGGGGAAA+AGG | + | chr6_1:34778622-34778641 | Msa0883560:CDS | 50.0% |
| TTCGATGGATGGGTCTGAGA+TGG | + | chr6_1:34778682-34778701 | Msa0883560:CDS | 50.0% | |
| ! | TCGATGGATGGGTCTGAGAT+GGG | + | chr6_1:34778683-34778702 | Msa0883560:CDS | 50.0% |
| ! | GTCTGAGATGGGGTTGTTTG+AGG | + | chr6_1:34778694-34778713 | Msa0883560:CDS | 50.0% |
| ! | GAGATGGGGTTGTTTGAGGT+TGG | + | chr6_1:34778698-34778717 | Msa0883560:CDS | 50.0% |
| !! | GGGTTGTTTGAGGTTGGTGA+TGG | + | chr6_1:34778704-34778723 | Msa0883560:CDS | 50.0% |
| ACCATCGCGAATAGGGTCTT+TGG | - | chr6_1:34779163-34779182 | None:intergenic | 50.0% | |
| ! | TATGATCGGCTTAGGGGGTT+TGG | + | chr6_1:34779207-34779226 | Msa0883560:intron | 50.0% |
| ! | ATGATCGGCTTAGGGGGTTT+GGG | + | chr6_1:34779208-34779227 | Msa0883560:intron | 50.0% |
| ACCAACCGAGTCACAGAGAT+TGG | - | chr6_1:34779435-34779454 | None:intergenic | 50.0% | |
| AAGCGACACTCAGTTTGTGG+TGG | + | chr6_1:34779456-34779475 | Msa0883560:intron | 50.0% | |
| AGCGACACTCAGTTTGTGGT+GGG | + | chr6_1:34779457-34779476 | Msa0883560:intron | 50.0% | |
| TTGAGTTTGTGGGAGGACTG+AGG | + | chr6_1:34779608-34779627 | Msa0883560:intron | 50.0% | |
| GGGATACTATGACGAGCATC+TGG | + | chr6_1:34779671-34779690 | Msa0883560:intron | 50.0% | |
| GGACTGTAAGTTGTGCAGAG+AGG | - | chr6_1:34780428-34780447 | None:intergenic | 50.0% | |
| !! | GAGGAGTGTTCGTGCTTCAT+AGG | - | chr6_1:34780799-34780818 | None:intergenic | 50.0% |
| ATGAAGCACGAACACTCCTC+AGG | + | chr6_1:34780799-34780818 | Msa0883560:intron | 50.0% | |
| ATCGGACACCGACACATGTT+TGG | - | chr6_1:34780842-34780861 | None:intergenic | 50.0% | |
| GGTCCTAGGCCAGGATAAAA+AGG | + | chr6_1:34781187-34781206 | Msa0883560:intron | 50.0% | |
| !! | ACCATGGAAAGGAGTGCCAT+CGG | - | chr6_1:34781477-34781496 | None:intergenic | 50.0% |
| !! | CTAACTGTAGTGGACGCTAC+TGG | + | chr6_1:34781541-34781560 | Msa0883560:intron | 50.0% |
| ! | GACCATGTGGATTGAATGCC+TGG | - | chr6_1:34782147-34782166 | None:intergenic | 50.0% |
| TTCAATCCACATGGTCCCCT+TGG | + | chr6_1:34782151-34782170 | Msa0883560:intron | 50.0% | |
| AACAAACCAAGGGGACCATG+TGG | - | chr6_1:34782160-34782179 | None:intergenic | 50.0% | |
| !! | ACATGGTCCCCTTGGTTTGT+TGG | + | chr6_1:34782159-34782178 | Msa0883560:intron | 50.0% |
| AATCATTTGACTGCCGTCGC+CGG | + | chr6_1:34783044-34783063 | Msa0883560:CDS | 50.0% | |
| GGTTGATCAGAACGAGAAGG+CGG | - | chr6_1:34783167-34783186 | None:intergenic | 50.0% | |
| TCGTGGTCGCTCTAACTTCA+TGG | + | chr6_1:34783196-34783215 | Msa0883560:CDS | 50.0% | |
| !! | AGTGGTGGTGGTGGTTGAAG+TGG | - | chr6_1:34778237-34778256 | None:intergenic | 55.0% |
| !! | GAACTTGGAAGTGGTGGTGG+TGG | - | chr6_1:34778246-34778265 | None:intergenic | 55.0% |
| TGGTGTCTGAGTGAGAACGG+CGG | - | chr6_1:34778412-34778431 | None:intergenic | 55.0% | |
| AGACACCACCTTCCGTTTCG+CGG | + | chr6_1:34778424-34778443 | Msa0883560:CDS | 55.0% | |
| GAAGTTTGCCGCGAAACGGA+AGG | - | chr6_1:34778435-34778454 | None:intergenic | 55.0% | |
| CGTCGAAGTTTGCCGCGAAA+CGG | - | chr6_1:34778439-34778458 | None:intergenic | 55.0% | |
| TGGACTCGTCAGAGTCCATC+GGG | - | chr6_1:34778529-34778548 | None:intergenic | 55.0% | |
| TGGACTCTGACGAGTCCATC+GGG | + | chr6_1:34778531-34778550 | Msa0883560:CDS | 55.0% | |
| ATCGGGAAGTCAGCGTCAGA+GGG | + | chr6_1:34778548-34778567 | Msa0883560:CDS | 55.0% | |
| !! | GGGTTAGGGTTTGGTGGTGA+AGG | + | chr6_1:34778614-34778633 | Msa0883560:CDS | 55.0% |
| ! | CGATGGATGGGTCTGAGATG+GGG | + | chr6_1:34778684-34778703 | Msa0883560:CDS | 55.0% |
| ! | ATTGAGTTTAGGGTGGGGGG+AGG | + | chr6_1:34779093-34779112 | Msa0883560:intron | 55.0% |
| ! | TTGAGTTTAGGGTGGGGGGA+GGG | + | chr6_1:34779094-34779113 | Msa0883560:intron | 55.0% |
| !! | AGGGGGCGCTGAGATTTGTT+GGG | + | chr6_1:34779113-34779132 | Msa0883560:intron | 55.0% |
| GCCAAAGACCCTATTCGCGA+TGG | + | chr6_1:34779159-34779178 | Msa0883560:intron | 55.0% | |
| !! | GCCAATCTCTGTGACTCGGT+TGG | + | chr6_1:34779431-34779450 | Msa0883560:intron | 55.0% |
| GCGACACTCAGTTTGTGGTG+GGG | + | chr6_1:34779458-34779477 | Msa0883560:intron | 55.0% | |
| CGACACTCAGTTTGTGGTGG+GGG | + | chr6_1:34779459-34779478 | Msa0883560:intron | 55.0% | |
| ! | AGCGGTGTTGAGTTTGTGGG+AGG | + | chr6_1:34779601-34779620 | Msa0883560:intron | 55.0% |
| CTGCTGCACGATCGAAAGAG+AGG | + | chr6_1:34780340-34780359 | Msa0883560:CDS | 55.0% | |
| GCACGAACACTCCTCAGGTT+AGG | + | chr6_1:34780804-34780823 | Msa0883560:intron | 55.0% | |
| TACGTAGATGGTCCTAGGCC+AGG | + | chr6_1:34781178-34781197 | Msa0883560:intron | 55.0% | |
| TCCGATGGCACTCCTTTCCA+TGG | + | chr6_1:34781473-34781492 | Msa0883560:intron | 55.0% | |
| CACTCCTTTCCATGGTGCAG+CGG | + | chr6_1:34781481-34781500 | Msa0883560:intron | 55.0% | |
| ATGCCAGGTTGTGTCTGCTG+GGG | - | chr6_1:34783143-34783162 | None:intergenic | 55.0% | |
| CATGCCAGGTTGTGTCTGCT+GGG | - | chr6_1:34783144-34783163 | None:intergenic | 55.0% | |
| GATCAACCCTTCAACGGTCG+TGG | + | chr6_1:34783179-34783198 | Msa0883560:CDS | 55.0% | |
| TGAGTGAGAACGGCGGTGGT+GGG | - | chr6_1:34778405-34778424 | None:intergenic | 60.0% | |
| TGTCTGAGTGAGAACGGCGG+TGG | - | chr6_1:34778409-34778428 | None:intergenic | 60.0% | |
| GTTTGCCGCGAAACGGAAGG+TGG | - | chr6_1:34778432-34778451 | None:intergenic | 60.0% | |
| ATCGAAGTCGGACGGGTCGA+AGG | - | chr6_1:34778471-34778490 | None:intergenic | 60.0% | |
| AGTCCATCGGGACAGCGTCA+GGG | - | chr6_1:34778517-34778536 | None:intergenic | 60.0% | |
| !! | CTCTGACGCTGACTTCCCGA+TGG | - | chr6_1:34778549-34778568 | None:intergenic | 60.0% |
| CATCGGGAAGTCAGCGTCAG+AGG | + | chr6_1:34778547-34778566 | Msa0883560:CDS | 60.0% | |
| GGAAGTCAGCGTCAGAGGGA+CGG | + | chr6_1:34778552-34778571 | Msa0883560:CDS | 60.0% | |
| CGTCAGAGGGACGGCATCTA+AGG | + | chr6_1:34778561-34778580 | Msa0883560:CDS | 60.0% | |
| ! | TGAGTTTAGGGTGGGGGGAG+GGG | + | chr6_1:34779095-34779114 | Msa0883560:intron | 60.0% |
| !! | GAGGGGGCGCTGAGATTTGT+TGG | + | chr6_1:34779112-34779131 | Msa0883560:intron | 60.0% |
| !! | GGGGGCGCTGAGATTTGTTG+GGG | + | chr6_1:34779114-34779133 | Msa0883560:intron | 60.0% |
| !! | GGGGCGCTGAGATTTGTTGG+GGG | + | chr6_1:34779115-34779134 | Msa0883560:intron | 60.0% |
| !! | GGGGTACTCTAAGGCGTGTC+TGG | + | chr6_1:34779134-34779153 | Msa0883560:intron | 60.0% |
| ! | CACTCAGTTTGTGGTGGGGG+AGG | + | chr6_1:34779462-34779481 | Msa0883560:intron | 60.0% |
| ! | TTTGTGGTGGGGGAGGACTG+AGG | + | chr6_1:34779469-34779488 | Msa0883560:intron | 60.0% |
| CATGCCGCTGCACCATGGAA+AGG | - | chr6_1:34781488-34781507 | None:intergenic | 60.0% | |
| GGTTGTGTCTGCTGGGGTTG+AGG | - | chr6_1:34783137-34783156 | None:intergenic | 60.0% | |
| CAACCCCAGCAGACACAACC+TGG | + | chr6_1:34783137-34783156 | Msa0883560:CDS | 60.0% | |
| GCATGCCAGGTTGTGTCTGC+TGG | - | chr6_1:34783145-34783164 | None:intergenic | 60.0% | |
| GAGCGACCACGACCGTTGAA+GGG | - | chr6_1:34783188-34783207 | None:intergenic | 60.0% | |
| AGAGCGACCACGACCGTTGA+AGG | - | chr6_1:34783189-34783208 | None:intergenic | 60.0% | |
| ! | TGGTGGGTCCCACGTGATGG+TGG | - | chr6_1:34778389-34778408 | None:intergenic | 65.0% |
| CTGAGTGAGAACGGCGGTGG+TGG | - | chr6_1:34778406-34778425 | None:intergenic | 65.0% | |
| ATCGGGACAGCGTCAGGGGA+CGG | - | chr6_1:34778512-34778531 | None:intergenic | 65.0% | |
| GTCCATCGGGACAGCGTCAG+GGG | - | chr6_1:34778516-34778535 | None:intergenic | 65.0% | |
| GAGTCCATCGGGACAGCGTC+AGG | - | chr6_1:34778518-34778537 | None:intergenic | 65.0% | |
| ! | GAGTTTAGGGTGGGGGGAGG+GGG | + | chr6_1:34779096-34779115 | Msa0883560:intron | 65.0% |
| GCACTCATGCCGCTGCACCA+TGG | - | chr6_1:34781493-34781512 | None:intergenic | 65.0% | |
| GAACGAGAAGGCGGCATGCC+AGG | - | chr6_1:34783158-34783177 | None:intergenic | 65.0% | |
| !! | CGGTGGTGGGTCCCACGTGA+TGG | - | chr6_1:34778392-34778411 | None:intergenic | 70.0% |
| AGGGGACGGGAGAGGGAGGT+TGG | - | chr6_1:34778498-34778517 | None:intergenic | 70.0% | |
| CAGCGTCAGGGGACGGGAGA+GGG | - | chr6_1:34778505-34778524 | None:intergenic | 70.0% | |
| ACAGCGTCAGGGGACGGGAG+AGG | - | chr6_1:34778506-34778525 | None:intergenic | 70.0% | |
| TCGGGACAGCGTCAGGGGAC+GGG | - | chr6_1:34778511-34778530 | None:intergenic | 70.0% | |
| GTCCCCTGACGCTGTCCCGA+TGG | + | chr6_1:34778511-34778530 | Msa0883560:CDS | 70.0% | |
| CGTCAGGGGACGGGAGAGGG+AGG | - | chr6_1:34778502-34778521 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 34778045 | 34783494 | 34778045 | ID=Msa0883560;Name=Msa0883560 |
| chr6_1 | mRNA | 34778045 | 34783494 | 34778045 | ID=Msa0883560-mRNA-1;Parent=Msa0883560;Name=Msa0883560-mRNA-1;_AED=0.04;_eAED=0.04;_QI=247|1|1|1|0.75|0.6|5|256|310 |
| chr6_1 | exon | 34778045 | 34778138 | 34778045 | ID=Msa0883560-mRNA-1:exon:8449;Parent=Msa0883560-mRNA-1 |
| chr6_1 | exon | 34778173 | 34778795 | 34778173 | ID=Msa0883560-mRNA-1:exon:8450;Parent=Msa0883560-mRNA-1 |
| chr6_1 | exon | 34780320 | 34780452 | 34780320 | ID=Msa0883560-mRNA-1:exon:8451;Parent=Msa0883560-mRNA-1 |
| chr6_1 | exon | 34782404 | 34782488 | 34782404 | ID=Msa0883560-mRNA-1:exon:8452;Parent=Msa0883560-mRNA-1 |
| chr6_1 | exon | 34782994 | 34783494 | 34782994 | ID=Msa0883560-mRNA-1:exon:8453;Parent=Msa0883560-mRNA-1 |
| chr6_1 | five_prime_UTR | 34778045 | 34778138 | 34778045 | ID=Msa0883560-mRNA-1:five_prime_utr;Parent=Msa0883560-mRNA-1 |
| chr6_1 | five_prime_UTR | 34778173 | 34778325 | 34778173 | ID=Msa0883560-mRNA-1:five_prime_utr;Parent=Msa0883560-mRNA-1 |
| chr6_1 | CDS | 34778326 | 34778795 | 34778326 | ID=Msa0883560-mRNA-1:cds;Parent=Msa0883560-mRNA-1 |
| chr6_1 | CDS | 34780320 | 34780452 | 34780320 | ID=Msa0883560-mRNA-1:cds;Parent=Msa0883560-mRNA-1 |
| chr6_1 | CDS | 34782404 | 34782488 | 34782404 | ID=Msa0883560-mRNA-1:cds;Parent=Msa0883560-mRNA-1 |
| chr6_1 | CDS | 34782994 | 34783238 | 34782994 | ID=Msa0883560-mRNA-1:cds;Parent=Msa0883560-mRNA-1 |
| chr6_1 | three_prime_UTR | 34783239 | 34783494 | 34783239 | ID=Msa0883560-mRNA-1:three_prime_utr;Parent=Msa0883560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
