Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0886510 | KEH26078.1 | 55.161 | 310 | 101 | 4 | 305 | 587 | 28 | 326 | 6.48e-103 | 325 |
| Msa0886510 | KEH26078.1 | 87.421 | 318 | 28 | 1 | 1 | 306 | 1 | 318 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0886510 | sp|Q8L3W1|VRN1_ARATH | 22.485 | 338 | 195 | 9 | 15 | 306 | 6 | 322 | 1.18e-13 | 75.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0886510 | A0A072UAG2 | 55.161 | 310 | 101 | 4 | 305 | 587 | 28 | 326 | 3.09e-103 | 325 |
| Msa0886510 | A0A072UAG2 | 87.421 | 318 | 28 | 1 | 1 | 306 | 1 | 318 | 0.0 | 580 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0886510 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0886510 | MtrunA17_Chr6g0467351 | 88.793 | 232 | 25 | 1 | 1 | 232 | 1 | 231 | 4.27e-149 | 429 |
| Msa0886510 | MtrunA17_Chr6g0467351 | 57.286 | 199 | 60 | 2 | 305 | 478 | 28 | 226 | 1.04e-68 | 222 |
| Msa0886510 | MtrunA17_Chr4g0067431 | 67.559 | 299 | 60 | 3 | 305 | 569 | 28 | 323 | 1.05e-134 | 395 |
| Msa0886510 | MtrunA17_Chr4g0067431 | 64.686 | 303 | 95 | 2 | 1 | 294 | 1 | 300 | 3.45e-132 | 389 |
| Msa0886510 | MtrunA17_Chr1g0163221 | 60.274 | 292 | 87 | 6 | 1 | 285 | 1 | 270 | 3.09e-106 | 324 |
| Msa0886510 | MtrunA17_Chr1g0163221 | 49.438 | 356 | 94 | 9 | 305 | 594 | 24 | 359 | 1.76e-89 | 281 |
| Msa0886510 | MtrunA17_Chr1g0163061 | 55.720 | 271 | 68 | 2 | 1 | 219 | 1 | 271 | 5.82e-79 | 250 |
| Msa0886510 | MtrunA17_Chr1g0163061 | 52.941 | 238 | 35 | 4 | 305 | 465 | 28 | 265 | 2.34e-54 | 186 |
| Msa0886510 | MtrunA17_Chr6g0467361 | 93.333 | 60 | 4 | 0 | 226 | 285 | 7 | 66 | 6.42e-34 | 124 |
| Msa0886510 | MtrunA17_Chr6g0467361 | 64.773 | 88 | 31 | 0 | 478 | 565 | 7 | 94 | 8.34e-33 | 121 |
| Msa0886510 | MtrunA17_Chr7g0233561 | 31.250 | 288 | 172 | 9 | 13 | 285 | 16 | 292 | 2.36e-26 | 110 |
| Msa0886510 | MtrunA17_Chr7g0233561 | 27.536 | 276 | 153 | 10 | 306 | 543 | 32 | 298 | 2.48e-15 | 77.4 |
| Msa0886510 | MtrunA17_Chr3g0131891 | 31.317 | 281 | 173 | 8 | 13 | 286 | 17 | 284 | 8.48e-26 | 108 |
| Msa0886510 | MtrunA17_Chr3g0131891 | 25.175 | 286 | 166 | 10 | 305 | 557 | 32 | 302 | 7.59e-12 | 67.0 |
| Msa0886510 | MtrunA17_Chr1g0163251 | 28.105 | 306 | 188 | 9 | 20 | 323 | 10 | 285 | 2.42e-25 | 108 |
| Msa0886510 | MtrunA17_Chr1g0163251 | 25.547 | 274 | 148 | 8 | 305 | 545 | 18 | 268 | 5.08e-18 | 86.7 |
| Msa0886510 | MtrunA17_Chr1g0163071 | 28.667 | 300 | 174 | 9 | 31 | 308 | 2 | 283 | 1.22e-23 | 102 |
| Msa0886510 | MtrunA17_Chr1g0163071 | 26.367 | 311 | 160 | 12 | 308 | 566 | 2 | 295 | 1.15e-19 | 90.1 |
| Msa0886510 | MtrunA17_Chr8g0390841 | 25.210 | 357 | 210 | 12 | 13 | 339 | 37 | 366 | 8.35e-23 | 102 |
| Msa0886510 | MtrunA17_Chr8g0390841 | 27.063 | 303 | 163 | 11 | 306 | 566 | 53 | 339 | 4.55e-17 | 84.3 |
| Msa0886510 | MtrunA17_Chr1g0163131 | 25.080 | 311 | 191 | 8 | 9 | 306 | 12 | 293 | 1.54e-21 | 95.9 |
| Msa0886510 | MtrunA17_Chr3g0103151 | 43.119 | 109 | 57 | 3 | 13 | 121 | 10 | 113 | 2.39e-21 | 91.3 |
| Msa0886510 | MtrunA17_Chr3g0103171 | 28.462 | 260 | 158 | 10 | 30 | 282 | 5 | 243 | 4.99e-21 | 93.2 |
| Msa0886510 | MtrunA17_Chr1g0163181 | 27.636 | 275 | 181 | 7 | 19 | 285 | 9 | 273 | 5.72e-21 | 95.9 |
| Msa0886510 | MtrunA17_Chr1g0163181 | 26.148 | 283 | 181 | 9 | 305 | 562 | 18 | 297 | 9.70e-19 | 89.4 |
| Msa0886510 | MtrunA17_Chr3g0103181 | 28.472 | 288 | 154 | 9 | 13 | 285 | 10 | 260 | 8.16e-21 | 92.8 |
| Msa0886510 | MtrunA17_Chr7g0233571 | 43.689 | 103 | 57 | 1 | 13 | 115 | 8 | 109 | 3.00e-20 | 89.7 |
| Msa0886510 | MtrunA17_Chr1g0163101 | 32.927 | 164 | 98 | 5 | 12 | 173 | 14 | 167 | 6.39e-19 | 84.7 |
| Msa0886510 | MtrunA17_Chr1g0163201 | 25.681 | 257 | 181 | 5 | 30 | 285 | 18 | 265 | 1.34e-18 | 88.6 |
| Msa0886510 | MtrunA17_Chr1g0163201 | 25.000 | 256 | 171 | 6 | 307 | 543 | 18 | 271 | 1.87e-13 | 72.4 |
| Msa0886510 | MtrunA17_Chr1g0163261 | 25.455 | 275 | 181 | 7 | 15 | 285 | 9 | 263 | 1.39e-18 | 87.0 |
| Msa0886510 | MtrunA17_Chr1g0208771 | 25.424 | 295 | 169 | 13 | 307 | 562 | 12 | 294 | 4.79e-18 | 87.0 |
| Msa0886510 | MtrunA17_Chr1g0208771 | 23.741 | 278 | 193 | 8 | 19 | 285 | 1 | 270 | 2.09e-17 | 85.1 |
| Msa0886510 | MtrunA17_Chr1g0163231 | 25.448 | 279 | 172 | 8 | 15 | 285 | 9 | 259 | 5.04e-18 | 85.1 |
| Msa0886510 | MtrunA17_Chr1g0163231 | 22.426 | 272 | 173 | 9 | 306 | 556 | 23 | 277 | 9.33e-12 | 66.2 |
| Msa0886510 | MtrunA17_Chr7g0233521 | 26.136 | 264 | 164 | 7 | 31 | 285 | 2 | 243 | 7.18e-18 | 84.3 |
| Msa0886510 | MtrunA17_Chr1g0171611 | 24.296 | 284 | 157 | 7 | 15 | 285 | 9 | 247 | 1.86e-17 | 83.2 |
| Msa0886510 | MtrunA17_Chr1g0171611 | 23.810 | 273 | 158 | 10 | 305 | 556 | 22 | 265 | 3.54e-12 | 67.4 |
| Msa0886510 | MtrunA17_Chr3g0103191 | 27.451 | 255 | 148 | 8 | 13 | 258 | 10 | 236 | 1.31e-16 | 80.1 |
| Msa0886510 | MtrunA17_Chr5g0419201 | 36.522 | 115 | 71 | 2 | 1 | 114 | 1 | 114 | 1.12e-15 | 75.9 |
| Msa0886510 | MtrunA17_Chr1g0163081 | 45.238 | 84 | 42 | 3 | 31 | 114 | 6 | 85 | 1.92e-15 | 73.9 |
| Msa0886510 | MtrunA17_Chr7g0233541 | 26.394 | 269 | 174 | 9 | 31 | 285 | 2 | 260 | 3.75e-15 | 76.6 |
| Msa0886510 | MtrunA17_Chr1g0163121 | 43.023 | 86 | 45 | 3 | 29 | 114 | 9 | 90 | 5.08e-15 | 72.4 |
| Msa0886510 | MtrunA17_Chr6g0476181 | 42.857 | 84 | 44 | 3 | 31 | 114 | 2 | 81 | 5.82e-15 | 72.8 |
| Msa0886510 | MtrunA17_Chr1g0163191 | 35.088 | 114 | 71 | 2 | 20 | 133 | 10 | 120 | 1.47e-14 | 71.6 |
| Msa0886510 | MtrunA17_Chr1g0162161 | 42.857 | 84 | 44 | 3 | 31 | 114 | 4 | 83 | 2.25e-14 | 71.2 |
| Msa0886510 | MtrunA17_Chr7g0233531 | 26.538 | 260 | 168 | 7 | 31 | 285 | 2 | 243 | 3.19e-14 | 73.6 |
| Msa0886510 | MtrunA17_Chr3g0077411 | 35.252 | 139 | 78 | 5 | 13 | 140 | 260 | 397 | 8.95e-14 | 74.3 |
| Msa0886510 | MtrunA17_Chr1g0163141 | 43.023 | 86 | 45 | 3 | 29 | 114 | 9 | 90 | 9.13e-14 | 70.1 |
| Msa0886510 | MtrunA17_Chr3g0077461 | 31.126 | 151 | 90 | 3 | 14 | 164 | 236 | 372 | 2.09e-13 | 72.8 |
| Msa0886510 | MtrunA17_Chr1g0163241 | 36.471 | 85 | 51 | 2 | 30 | 114 | 22 | 103 | 7.17e-12 | 64.3 |
| Msa0886510 | MtrunA17_Chr1g0154131 | 24.921 | 317 | 185 | 12 | 13 | 308 | 182 | 466 | 1.92e-11 | 66.6 |
| Msa0886510 | MtrunA17_Chr3g0077451 | 30.357 | 112 | 73 | 3 | 29 | 139 | 10 | 117 | 8.49e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0886510 | AT3G18990.1 | 22.485 | 338 | 195 | 9 | 15 | 306 | 6 | 322 | 1.20e-14 | 75.9 |
| Msa0886510 | AT3G18990.2 | 22.485 | 338 | 195 | 9 | 15 | 306 | 6 | 322 | 2.15e-14 | 75.5 |
| Msa0886510 | AT1G49475.1 | 37.391 | 115 | 70 | 2 | 15 | 129 | 34 | 146 | 4.91e-14 | 71.2 |
| Msa0886510 | AT3G18960.1 | 32.353 | 102 | 68 | 1 | 15 | 116 | 30 | 130 | 6.01e-14 | 71.6 |
| Msa0886510 | AT3G18960.2 | 32.353 | 102 | 68 | 1 | 15 | 116 | 30 | 130 | 6.20e-14 | 71.2 |
| Msa0886510 | AT4G01580.1 | 29.412 | 102 | 71 | 1 | 15 | 116 | 30 | 130 | 2.03e-12 | 66.6 |
| Msa0886510 | AT3G18960.3 | 33.333 | 87 | 57 | 1 | 30 | 116 | 8 | 93 | 5.75e-11 | 62.0 |
Find 82 sgRNAs with CRISPR-Local
Find 434 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCACAATAATTTAAAATT+TGG | 0.142889 | 6_1:+45476465 | Msa0886510:CDS |
| CTCTTTCAATGTATGTCTTT+TGG | 0.144880 | 6_1:-45475727 | None:intergenic |
| CCATCACAAGTTTCTCTTAA+AGG | 0.175780 | 6_1:-45470724 | None:intergenic |
| CATCATGTGCAGATGTTTCT+TGG | 0.201333 | 6_1:-45476331 | None:intergenic |
| ACTTTCATTTGTGTGATATT+TGG | 0.209359 | 6_1:-45470535 | None:intergenic |
| GCTCACAATAATTTGAAATT+TGG | 0.213375 | 6_1:+45471740 | Msa0886510:CDS |
| CTCTCTCAATGTGTGTCTTC+TGG | 0.218908 | 6_1:-45471130 | None:intergenic |
| TGCCTCCTCGCAAAACTTAT+TGG | 0.225687 | 6_1:-45470475 | None:intergenic |
| AGATAAATTACCTTCAAAAT+AGG | 0.229149 | 6_1:-45476577 | None:intergenic |
| CACCGTCTTCTATAGTTTCT+AGG | 0.249205 | 6_1:+45475388 | Msa0886510:CDS |
| GAAGACGGTGAAGGAGATTT+TGG | 0.258435 | 6_1:-45475375 | None:intergenic |
| TTTGGAAGCCTTAGAGTAAC+TGG | 0.258482 | 6_1:-45475072 | None:intergenic |
| ATTTGCAGATTATTTATCTT+TGG | 0.270970 | 6_1:+45475167 | Msa0886510:CDS |
| CTTCATTATCACCTGGTAAA+AGG | 0.287609 | 6_1:+45470770 | Msa0886510:CDS |
| TTCTATCTTGATCAACAAAA+AGG | 0.293775 | 6_1:-45471646 | None:intergenic |
| ACACATTGAGAGAGATCTTT+TGG | 0.323525 | 6_1:+45471139 | Msa0886510:CDS |
| CATCACAAGTTTCTCTTAAA+GGG | 0.327281 | 6_1:-45470723 | None:intergenic |
| TTTGCAGATTATTTATCTTT+GGG | 0.340044 | 6_1:+45475168 | Msa0886510:CDS |
| TAGAACATGGAATGCTGATT+TGG | 0.353140 | 6_1:+45471664 | Msa0886510:CDS |
| TCTAATCGACCATCTTCAAT+AGG | 0.374130 | 6_1:-45472488 | None:intergenic |
| TGTGTCTTCACAAATTCATT+TGG | 0.382410 | 6_1:-45471593 | None:intergenic |
| AAACCAGTGATTATGATGTT+TGG | 0.387209 | 6_1:+45475124 | Msa0886510:CDS |
| GATAAATTACCTTCAAAATA+GGG | 0.387582 | 6_1:-45476576 | None:intergenic |
| TAACAAACCCAGTCACTCTA+AGG | 0.404015 | 6_1:+45470509 | Msa0886510:CDS |
| CTCTTTGATGTGATTGTACT+CGG | 0.404696 | 6_1:+45470676 | Msa0886510:CDS |
| TATCCTTCAAGAAGGAAAAC+TGG | 0.409944 | 6_1:+45470072 | Msa0886510:CDS |
| TGTTTCTTGGCAAATTCAAT+TGG | 0.419212 | 6_1:-45476318 | None:intergenic |
| TTTGGAAGCCTTAGAGTGAC+TGG | 0.425843 | 6_1:-45470517 | None:intergenic |
| AAATAGTTGTGATGATCTTA+AGG | 0.434748 | 6_1:+45475631 | Msa0886510:CDS |
| TATGAAATCTTGCATGTGCT+TGG | 0.460028 | 6_1:-45475464 | None:intergenic |
| CGAGAGAGAAAATAGCAACT+TGG | 0.460403 | 6_1:-45476536 | None:intergenic |
| TGGTTCTTTGAAAGTTACTA+AGG | 0.462573 | 6_1:+45470744 | Msa0886510:CDS |
| AAACCAGTGATTATGATGTC+TGG | 0.472775 | 6_1:+45470569 | Msa0886510:CDS |
| CAACCGAAAAGAAAGTTACT+TGG | 0.482402 | 6_1:+45475097 | Msa0886510:CDS |
| CTTCATCATCGCGAGGTAAG+AGG | 0.484119 | 6_1:+45475352 | Msa0886510:CDS |
| TCACACAAATGAAAGTTACT+TGG | 0.484968 | 6_1:+45470542 | Msa0886510:CDS |
| AATAATCAATTTACACTAAG+TGG | 0.504414 | 6_1:+45476423 | Msa0886510:CDS |
| ATGTCTTCTCACAAAACCTA+AGG | 0.504643 | 6_1:-45475031 | None:intergenic |
| CTCTTACCTCGCGATGATGA+AGG | 0.507637 | 6_1:-45475351 | None:intergenic |
| AATTTACACTAAGTGGTGGT+TGG | 0.508389 | 6_1:+45476430 | Msa0886510:CDS |
| CATATGCACATGATGAAAGA+AGG | 0.522234 | 6_1:+45471614 | Msa0886510:CDS |
| GCACATGATGGAAGGAAGAA+AGG | 0.525041 | 6_1:+45476344 | Msa0886510:CDS |
| TTTATGTTAAACAAATTCAA+AGG | 0.533528 | 6_1:+45476501 | Msa0886510:CDS |
| ATCTCCATCACCTTGTGTGA+AGG | 0.534503 | 6_1:+45470798 | Msa0886510:CDS |
| AAACCAAACATCATAATCAC+TGG | 0.538084 | 6_1:-45475127 | None:intergenic |
| TAATAGTCATGATGATATCA+AGG | 0.538648 | 6_1:+45471034 | Msa0886510:CDS |
| AGATACTTGTCTCTTGAAGA+TGG | 0.554546 | 6_1:+45477423 | Msa0886510:CDS |
| GTATGACAGAAAGTACCCTT+AGG | 0.563021 | 6_1:+45475015 | Msa0886510:intron |
| AAACAATTTGCACTAACAAG+TGG | 0.564869 | 6_1:+45471701 | Msa0886510:CDS |
| TGATACTTGCCTATTGAAGA+TGG | 0.567074 | 6_1:+45472479 | Msa0886510:CDS |
| AAACCAGACATCATAATCAC+TGG | 0.567237 | 6_1:-45470572 | None:intergenic |
| TTGTGTGAAGGTTTGTAAGA+AGG | 0.570655 | 6_1:+45470810 | Msa0886510:CDS |
| AATTTGCACTAACAAGTGGT+TGG | 0.572723 | 6_1:+45471705 | Msa0886510:CDS |
| CAAGAAACATCTGCACATGA+TGG | 0.576472 | 6_1:+45476332 | Msa0886510:CDS |
| CACACAAATGAAAGTTACTT+GGG | 0.576576 | 6_1:+45470543 | Msa0886510:CDS |
| GAAGGTGAAAATCAACCCTA+AGG | 0.579493 | 6_1:+45470828 | Msa0886510:CDS |
| CAAACCTTCACACAAGGTGA+TGG | 0.582575 | 6_1:-45470802 | None:intergenic |
| TTGTTGATAAAGACATAACA+TGG | 0.582622 | 6_1:+45476376 | Msa0886510:CDS |
| CATGCAAGTATCCTTCAAGA+AGG | 0.583757 | 6_1:+45470064 | Msa0886510:CDS |
| AAACATCTGCACATGATGGA+AGG | 0.585922 | 6_1:+45476336 | Msa0886510:CDS |
| TTGGAAGCCTTAGAGTGACT+GGG | 0.587860 | 6_1:-45470516 | None:intergenic |
| AAGGATTGTTACTTCAAAGA+GGG | 0.588782 | 6_1:+45472456 | Msa0886510:CDS |
| CCTTTAAGAGAAACTTGTGA+TGG | 0.589265 | 6_1:+45470724 | Msa0886510:CDS |
| GAAGGATTGTTACTTCAAAG+AGG | 0.590696 | 6_1:+45472455 | Msa0886510:CDS |
| AACCGAAAAGAAAGTTACTT+GGG | 0.591445 | 6_1:+45475098 | Msa0886510:CDS |
| AACTACTGAAGAATATGAAG+AGG | 0.597652 | 6_1:+45475290 | Msa0886510:CDS |
| TTGTTGATCAAGATAGAACA+TGG | 0.602629 | 6_1:+45471651 | Msa0886510:CDS |
| TTGGAAGCCTTAGAGTAACT+GGG | 0.604374 | 6_1:-45475071 | None:intergenic |
| TGTCTTCTCACAAAACCTAA+GGG | 0.611258 | 6_1:-45475030 | None:intergenic |
| AATCAATTTACACTAAGTGG+TGG | 0.617140 | 6_1:+45476426 | Msa0886510:CDS |
| ATACATTGAAAGAGATCACT+TGG | 0.619250 | 6_1:+45475736 | Msa0886510:CDS |
| TTCTTACAAACCTTCACACA+AGG | 0.621821 | 6_1:-45470808 | None:intergenic |
| TTCCTAGAAACTATAGAAGA+CGG | 0.622274 | 6_1:-45475390 | None:intergenic |
| TTTGCGAGGAGGCATTGGCA+AGG | 0.624036 | 6_1:+45470484 | Msa0886510:CDS |
| GGGTTGGCTAGAATTTGTGA+AGG | 0.624634 | 6_1:+45472437 | Msa0886510:intron |
| GAAACTATAGAAGACGGTGA+AGG | 0.628807 | 6_1:-45475384 | None:intergenic |
| GAACTTGAACATCAGAACAA+TGG | 0.632266 | 6_1:+45470019 | Msa0886510:CDS |
| TTTGTGAGAAGACATTGGCA+AGG | 0.633520 | 6_1:+45475039 | Msa0886510:CDS |
| AAGGATCCTTCATTATCACC+TGG | 0.639424 | 6_1:+45470763 | Msa0886510:CDS |
| TCTCTTGAAGATGGTCGATG+AGG | 0.657728 | 6_1:+45477432 | Msa0886510:CDS |
| GACGATCCTTCATCATCGCG+AGG | 0.664290 | 6_1:+45475345 | Msa0886510:CDS |
| GTGATTGTACTCGGTAAATG+CGG | 0.696593 | 6_1:+45470685 | Msa0886510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATGAATTTAAGAATT+AGG | + | chr6_1:45470128-45470147 | Msa0886510:intron | 10.0% |
| !! | AAAATATGAATTTATGAATT+AGG | + | chr6_1:45470170-45470189 | Msa0886510:intron | 10.0% |
| !!! | ATTTTTTTGTCTTATTTTTT+AGG | + | chr6_1:45470977-45470996 | Msa0886510:intron | 10.0% |
| !!! | TTTTTTTGTCTTATTTTTTA+GGG | + | chr6_1:45470978-45470997 | Msa0886510:intron | 10.0% |
| !!! | ATAAATTACCTTTAAAATTA+GGG | - | chr6_1:45471854-45471873 | None:intergenic | 10.0% |
| !!! | AATAAATTACCTTTAAAATT+AGG | - | chr6_1:45471855-45471874 | None:intergenic | 10.0% |
| !! | TAAATTATATTGATAAGAAA+AGG | - | chr6_1:45472401-45472420 | None:intergenic | 10.0% |
| !! | AGATTGTTAAAAAAAATAAA+AGG | - | chr6_1:45474598-45474617 | None:intergenic | 10.0% |
| !!! | AATTTTCATTTTTTAAATAG+GGG | - | chr6_1:45474763-45474782 | None:intergenic | 10.0% |
| !!! | CAAATTTTCATTTTTTAAAT+AGG | - | chr6_1:45474765-45474784 | None:intergenic | 10.0% |
| !! | CTATTTAAAAAATGAAAATT+TGG | + | chr6_1:45474763-45474782 | Msa0886510:intron | 10.0% |
| !! | AATATATTAAAATGGAATTA+TGG | - | chr6_1:45476098-45476117 | None:intergenic | 10.0% |
| !!! | TTAGGAGTATAATAAAATAA+CGG | + | chr6_1:45470146-45470165 | Msa0886510:intron | 15.0% |
| !!! | AGCAAAATTTCATAATTTTA+AGG | + | chr6_1:45470894-45470913 | Msa0886510:CDS | 15.0% |
| !!! | TTTTTTGTCTTATTTTTTAG+GGG | + | chr6_1:45470979-45470998 | Msa0886510:intron | 15.0% |
| !! | TAAAATCAATAATTCAAAAC+AGG | + | chr6_1:45471565-45471584 | Msa0886510:intron | 15.0% |
| !! | AAAAATCATAAAATCAACAA+TGG | - | chr6_1:45472056-45472075 | None:intergenic | 15.0% |
| !! | AATTTATGAATTTGATTCAT+AGG | - | chr6_1:45472704-45472723 | None:intergenic | 15.0% |
| !! | TAATATAATCATGTCATATA+TGG | + | chr6_1:45473027-45473046 | Msa0886510:intron | 15.0% |
| !!! | ATTTTCATTTTTTAAATAGG+GGG | - | chr6_1:45474762-45474781 | None:intergenic | 15.0% |
| !!! | ATTTCATAATTTTAAAGATG+TGG | + | chr6_1:45475479-45475498 | Msa0886510:CDS | 15.0% |
| !! | TATATAAAATGAAACATAAC+AGG | - | chr6_1:45475530-45475549 | None:intergenic | 15.0% |
| !!! | GCTACTTTTTTTTTTTTTTT+TGG | + | chr6_1:45475584-45475603 | Msa0886510:intron | 15.0% |
| !! | TTTATGTTAAACAAATTCAA+AGG | + | chr6_1:45476501-45476520 | Msa0886510:CDS | 15.0% |
| !!! | AATTTATCTAAAGTAAAAGA+TGG | - | chr6_1:45476625-45476644 | None:intergenic | 15.0% |
| !! | TTACTTTAGATAAATTCTAA+TGG | + | chr6_1:45476629-45476648 | Msa0886510:intron | 15.0% |
| !! | TACTTTAGATAAATTCTAAT+GGG | + | chr6_1:45476630-45476649 | Msa0886510:intron | 15.0% |
| !!! | TTTTTACTTTTATTTTGTGA+CGG | + | chr6_1:45476834-45476853 | Msa0886510:intron | 15.0% |
| !!! | CATGAATAATTTTGAAAAAG+TGG | - | chr6_1:45470048-45470067 | None:intergenic | 20.0% |
| !!! | AATTTTAAGGATATGAACAA+TGG | + | chr6_1:45470907-45470926 | Msa0886510:CDS | 20.0% |
| !!! | TAAAATTTTTGGTACCTTTA+GGG | - | chr6_1:45471206-45471225 | None:intergenic | 20.0% |
| !!! | TAAAGGTACCAAAAATTTTA+GGG | + | chr6_1:45471206-45471225 | Msa0886510:intron | 20.0% |
| !!! | ATTCACGTCTATATTTTTAA+GGG | - | chr6_1:45471316-45471335 | None:intergenic | 20.0% |
| !!! | TATTCACGTCTATATTTTTA+AGG | - | chr6_1:45471317-45471336 | None:intergenic | 20.0% |
| !! | TTTCATTATCTATTCTTTCA+TGG | + | chr6_1:45471360-45471379 | Msa0886510:intron | 20.0% |
| !! | TTCATTATCTATTCTTTCAT+GGG | + | chr6_1:45471361-45471380 | Msa0886510:intron | 20.0% |
| !!! | TTATTAAAGTACCTAGATTA+TGG | + | chr6_1:45471460-45471479 | Msa0886510:intron | 20.0% |
| !!! | TGAAAATTCCCTAATTTTAA+AGG | + | chr6_1:45471843-45471862 | Msa0886510:intron | 20.0% |
| !!! | TTTTTAAAAGTTTCACATGA+AGG | + | chr6_1:45472237-45472256 | Msa0886510:intron | 20.0% |
| !! | AATTTCCTAATGTAGTTTAT+TGG | - | chr6_1:45472317-45472336 | None:intergenic | 20.0% |
| !!! | AGGAAATTCATTTTAGAAAA+TGG | + | chr6_1:45472329-45472348 | Msa0886510:intron | 20.0% |
| !! | TTTAATTACTATGCAATTAG+AGG | + | chr6_1:45472638-45472657 | Msa0886510:intron | 20.0% |
| !!! | TATATTTTTGTTAAATGTGC+TGG | + | chr6_1:45473653-45473672 | Msa0886510:intron | 20.0% |
| !!! | TATATTTTTGTTAAATGTGC+TGG | + | chr6_1:45473653-45473672 | Msa0886510:intron | 20.0% |
| !!! | ACTACAAATTTAGTTTAAAG+TGG | + | chr6_1:45474183-45474202 | Msa0886510:intron | 20.0% |
| !! | TAGATATGAATTGCAAAATT+AGG | + | chr6_1:45474617-45474636 | Msa0886510:intron | 20.0% |
| !! | AGATATGAATTGCAAAATTA+GGG | + | chr6_1:45474618-45474637 | Msa0886510:intron | 20.0% |
| !! | TCATTGGTAAAATATAGTTT+AGG | + | chr6_1:45474648-45474667 | Msa0886510:intron | 20.0% |
| !!! | GAATGAGTATAGTTTTTATT+TGG | + | chr6_1:45474688-45474707 | Msa0886510:intron | 20.0% |
| !!! | CTTTGCCATTTTTTTTAATA+GGG | + | chr6_1:45474844-45474863 | Msa0886510:intron | 20.0% |
| !! | ATTTGCAGATTATTTATCTT+TGG | + | chr6_1:45475167-45475186 | Msa0886510:CDS | 20.0% |
| !! | TTTGCAGATTATTTATCTTT+GGG | + | chr6_1:45475168-45475187 | Msa0886510:CDS | 20.0% |
| !!! | CTATTTGTGTCTTATTTTTT+AGG | + | chr6_1:45475557-45475576 | Msa0886510:intron | 20.0% |
| !!! | AAAATTCACTTTTTATAACG+TGG | - | chr6_1:45475962-45475981 | None:intergenic | 20.0% |
| !! | AACTCAGAATAAATACAAAA+AGG | - | chr6_1:45476283-45476302 | None:intergenic | 20.0% |
| !! | AATAATCAATTTACACTAAG+TGG | + | chr6_1:45476423-45476442 | Msa0886510:CDS | 20.0% |
| !!! | ATTTTAAATTATTGTGAGCT+CGG | - | chr6_1:45476464-45476483 | None:intergenic | 20.0% |
| !!! | GCTCACAATAATTTAAAATT+TGG | + | chr6_1:45476465-45476484 | Msa0886510:CDS | 20.0% |
| !! | GATAAATTACCTTCAAAATA+GGG | - | chr6_1:45476579-45476598 | None:intergenic | 20.0% |
| !! | AGATAAATTACCTTCAAAAT+AGG | - | chr6_1:45476580-45476599 | None:intergenic | 20.0% |
| !!! | TTTTCTTACATATTGGAATA+GGG | - | chr6_1:45476745-45476764 | None:intergenic | 20.0% |
| !!! | TTTTTCTTACATATTGGAAT+AGG | - | chr6_1:45476746-45476765 | None:intergenic | 20.0% |
| !!! | ACTCATTTTTTCTTACATAT+TGG | - | chr6_1:45476752-45476771 | None:intergenic | 20.0% |
| !! | TCTATTAAGTTCATCAATTT+AGG | - | chr6_1:45476778-45476797 | None:intergenic | 20.0% |
| !!! | TTTTGTTAGAACAAAGTAAA+TGG | - | chr6_1:45476932-45476951 | None:intergenic | 20.0% |
| !! | TTTTACAGAAAATTGAGAAC+TGG | - | chr6_1:45470326-45470345 | None:intergenic | 25.0% |
| ! | ACTTTCATTTGTGTGATATT+TGG | - | chr6_1:45470538-45470557 | None:intergenic | 25.0% |
| !! | TAGATTCTTTTTGTTCCTTA+GGG | - | chr6_1:45470846-45470865 | None:intergenic | 25.0% |
| !! | TTAGATTCTTTTTGTTCCTT+AGG | - | chr6_1:45470847-45470866 | None:intergenic | 25.0% |
| !! | TATGAAATTTTGCTTGAGAT+TGG | - | chr6_1:45470888-45470907 | None:intergenic | 25.0% |
| ! | TAATAGTCATGATGATATCA+AGG | + | chr6_1:45471034-45471053 | Msa0886510:CDS | 25.0% |
| ! | TAGTAATAGATTAACCCTAA+AGG | + | chr6_1:45471189-45471208 | Msa0886510:intron | 25.0% |
| !!! | CTAAAATTTTTGGTACCTTT+AGG | - | chr6_1:45471207-45471226 | None:intergenic | 25.0% |
| !!! | CTAAAGGTACCAAAAATTTT+AGG | + | chr6_1:45471205-45471224 | Msa0886510:intron | 25.0% |
| !!! | AAAGGTACCAAAAATTTTAG+GGG | + | chr6_1:45471207-45471226 | Msa0886510:intron | 25.0% |
| !!! | GTCTATATTCTTTAGGTTTT+TGG | - | chr6_1:45471235-45471254 | None:intergenic | 25.0% |
| ! | ATGTTTCGTCTATATTCTTT+AGG | - | chr6_1:45471242-45471261 | None:intergenic | 25.0% |
| !!! | TGATCACTGTTGAATTTTTT+AGG | + | chr6_1:45471271-45471290 | Msa0886510:intron | 25.0% |
| !!! | GATCACTGTTGAATTTTTTA+GGG | + | chr6_1:45471272-45471291 | Msa0886510:intron | 25.0% |
| !!! | ATCACTGTTGAATTTTTTAG+GGG | + | chr6_1:45471273-45471292 | Msa0886510:intron | 25.0% |
| ! | TCAATCGAATTATACCATAA+TGG | + | chr6_1:45471412-45471431 | Msa0886510:intron | 25.0% |
| ! | CAATCGAATTATACCATAAT+GGG | + | chr6_1:45471413-45471432 | Msa0886510:intron | 25.0% |
| ! | AATATAACAAAGTCCCATTA+TGG | - | chr6_1:45471429-45471448 | None:intergenic | 25.0% |
| ! | AGTTATGTATAGCATACTAA+TGG | + | chr6_1:45471511-45471530 | Msa0886510:intron | 25.0% |
| ! | TTCTATCTTGATCAACAAAA+AGG | - | chr6_1:45471649-45471668 | None:intergenic | 25.0% |
| !! | GCTCACAATAATTTGAAATT+TGG | + | chr6_1:45471740-45471759 | Msa0886510:CDS | 25.0% |
| !! | CAAAACTTTTGTACTCAATT+AGG | + | chr6_1:45472022-45472041 | Msa0886510:intron | 25.0% |
| !! | TTATGAGTCTTGTATATAGA+CGG | - | chr6_1:45472094-45472113 | None:intergenic | 25.0% |
| ! | AATTATATTCCAAAATCGCA+AGG | - | chr6_1:45472366-45472385 | None:intergenic | 25.0% |
| ! | GATATTACAATTTCAAGAAG+AGG | + | chr6_1:45472525-45472544 | Msa0886510:intron | 25.0% |
| ! | CAACTATAATTCATGTTGTT+TGG | - | chr6_1:45472605-45472624 | None:intergenic | 25.0% |
| ! | TTGTTCAATAGACGAATTAA+TGG | - | chr6_1:45474273-45474292 | None:intergenic | 25.0% |
| ! | GGAATATAGGAAGAATAATT+TGG | - | chr6_1:45474301-45474320 | None:intergenic | 25.0% |
| ! | ATATATAGAGAGAGGAATAT+AGG | - | chr6_1:45474314-45474333 | None:intergenic | 25.0% |
| !! | CTATATATATTGACGGTTTT+AGG | + | chr6_1:45474326-45474345 | Msa0886510:intron | 25.0% |
| ! | TGTTTATTTAGAAACGTTAC+AGG | + | chr6_1:45474352-45474371 | Msa0886510:intron | 25.0% |
| !! | AGAAATTGATGGTCAATTAT+GGG | - | chr6_1:45474385-45474404 | None:intergenic | 25.0% |
| !! | AAGAAATTGATGGTCAATTA+TGG | - | chr6_1:45474386-45474405 | None:intergenic | 25.0% |
| !!! | TAGTTTTTTAGTGGAAAGAA+GGG | - | chr6_1:45474435-45474454 | None:intergenic | 25.0% |
| !!! | TTAGTTTTTTAGTGGAAAGA+AGG | - | chr6_1:45474436-45474455 | None:intergenic | 25.0% |
| !!! | ATGTAGAGTTAGTTTTTTAG+TGG | - | chr6_1:45474444-45474463 | None:intergenic | 25.0% |
| !! | AAACTAACTCTACATAGTTT+TGG | + | chr6_1:45474449-45474468 | Msa0886510:intron | 25.0% |
| !!! | GAAGAATGATTTTGAAAAAG+TGG | - | chr6_1:45474534-45474553 | None:intergenic | 25.0% |
| ! | AAATTAGGGCTATAAATCAT+TGG | + | chr6_1:45474632-45474651 | Msa0886510:intron | 25.0% |
| !!! | CGCAACATTTTAAAACTTAT+GGG | - | chr6_1:45474732-45474751 | None:intergenic | 25.0% |
| !!! | TCGCAACATTTTAAAACTTA+TGG | - | chr6_1:45474733-45474752 | None:intergenic | 25.0% |
| !!! | GTTTTAAAATGTTGCGATTT+TGG | + | chr6_1:45474736-45474755 | Msa0886510:intron | 25.0% |
| ! | ATTAAAAAAAATGGCAAAGG+TGG | - | chr6_1:45474843-45474862 | None:intergenic | 25.0% |
| ! | CCTATTAAAAAAAATGGCAA+AGG | - | chr6_1:45474846-45474865 | None:intergenic | 25.0% |
| !!! | CCTTTGCCATTTTTTTTAAT+AGG | + | chr6_1:45474843-45474862 | Msa0886510:intron | 25.0% |
| ! | TTGGTCCCTATTAAAAAAAA+TGG | - | chr6_1:45474852-45474871 | None:intergenic | 25.0% |
| ! | TCTCTTTAATGTGATTGTAT+TGG | + | chr6_1:45475230-45475249 | Msa0886510:intron | 25.0% |
| ! | CTCTTTAATGTGATTGTATT+GGG | + | chr6_1:45475231-45475250 | Msa0886510:intron | 25.0% |
| !!! | AATTTTAAAGATGTGGACAA+TGG | + | chr6_1:45475486-45475505 | Msa0886510:CDS | 25.0% |
| ! | TATTTCCTGTTGAAAATTTG+AGG | - | chr6_1:45475616-45475635 | None:intergenic | 25.0% |
| ! | AAATAGTTGTGATGATCTTA+AGG | + | chr6_1:45475631-45475650 | Msa0886510:CDS | 25.0% |
| ! | AGACTTAAGAAATTCTAACT+TGG | + | chr6_1:45475831-45475850 | Msa0886510:intron | 25.0% |
| ! | TTAAGAAATTCTAACTTGGT+TGG | + | chr6_1:45475835-45475854 | Msa0886510:intron | 25.0% |
| ! | ACTAATGAAATTGACCAAAT+GGG | - | chr6_1:45475890-45475909 | None:intergenic | 25.0% |
| ! | TACTAATGAAATTGACCAAA+TGG | - | chr6_1:45475891-45475910 | None:intergenic | 25.0% |
| !!! | TTTTTTGTCAAGTAGTATAG+TGG | - | chr6_1:45475988-45476007 | None:intergenic | 25.0% |
| ! | CATGACAATTAATCTCATTA+AGG | - | chr6_1:45476030-45476049 | None:intergenic | 25.0% |
| ! | GATTAATTGTCATGTACTAA+TGG | + | chr6_1:45476036-45476055 | Msa0886510:intron | 25.0% |
| ! | GAATTATGGTATAACTTTAC+AGG | - | chr6_1:45476084-45476103 | None:intergenic | 25.0% |
| ! | AATTCACACACATATACATA+AGG | - | chr6_1:45476233-45476252 | None:intergenic | 25.0% |
| ! | ATAAATACAAAAAGGCCAAA+TGG | - | chr6_1:45476275-45476294 | None:intergenic | 25.0% |
| ! | TTTATTCTGAGTTGTATTAC+AGG | + | chr6_1:45476290-45476309 | Msa0886510:intron | 25.0% |
| !! | TTGTTGATAAAGACATAACA+TGG | + | chr6_1:45476376-45476395 | Msa0886510:CDS | 25.0% |
| ! | TAAAGAGAGCAAATTAAGAT+TGG | + | chr6_1:45477118-45477137 | Msa0886510:intron | 25.0% |
| ! | TCAACATGAATTAGTTATGT+TGG | + | chr6_1:45477343-45477362 | Msa0886510:intron | 25.0% |
| CAAAACACACAAAAGACATA+TGG | - | chr6_1:45470231-45470250 | None:intergenic | 30.0% | |
| TCACACAAATGAAAGTTACT+TGG | + | chr6_1:45470542-45470561 | Msa0886510:CDS | 30.0% | |
| CACACAAATGAAAGTTACTT+GGG | + | chr6_1:45470543-45470562 | Msa0886510:CDS | 30.0% | |
| CATCACAAGTTTCTCTTAAA+GGG | - | chr6_1:45470726-45470745 | None:intergenic | 30.0% | |
| ! | TGGTTCTTTGAAAGTTACTA+AGG | + | chr6_1:45470744-45470763 | Msa0886510:CDS | 30.0% |
| TTAAGGATATGAACAATGGT+TGG | + | chr6_1:45470911-45470930 | Msa0886510:intron | 30.0% | |
| !! | AAGGTACCAAAAATTTTAGG+GGG | + | chr6_1:45471208-45471227 | Msa0886510:intron | 30.0% |
| !!! | TCACTGTTGAATTTTTTAGG+GGG | + | chr6_1:45471274-45471293 | Msa0886510:intron | 30.0% |
| CCAATCAAAATCCATAATCT+AGG | - | chr6_1:45471474-45471493 | None:intergenic | 30.0% | |
| !! | CCTAGATTATGGATTTTGAT+TGG | + | chr6_1:45471471-45471490 | Msa0886510:intron | 30.0% |
| TGTGTCTTCACAAATTCATT+TGG | - | chr6_1:45471596-45471615 | None:intergenic | 30.0% | |
| TTGTTGATCAAGATAGAACA+TGG | + | chr6_1:45471651-45471670 | Msa0886510:CDS | 30.0% | |
| AAACAATTTGCACTAACAAG+TGG | + | chr6_1:45471701-45471720 | Msa0886510:CDS | 30.0% | |
| ! | AACTTTTGTACTCAATTAGG+TGG | + | chr6_1:45472025-45472044 | Msa0886510:intron | 30.0% |
| GTCTACCAATAAACTACATT+AGG | + | chr6_1:45472309-45472328 | Msa0886510:intron | 30.0% | |
| ! | AAGGATTGTTACTTCAAAGA+GGG | + | chr6_1:45472456-45472475 | Msa0886510:CDS | 30.0% |
| AATTGACAAGTACAATGTGA+TGG | - | chr6_1:45472733-45472752 | None:intergenic | 30.0% | |
| AATCATGTCATATATGGACT+TGG | + | chr6_1:45473033-45473052 | Msa0886510:intron | 30.0% | |
| TGACAATGTGTTTATAAGTG+AGG | + | chr6_1:45473093-45473112 | Msa0886510:intron | 30.0% | |
| GACAATGTGTTTATAAGTGA+GGG | + | chr6_1:45473094-45473113 | Msa0886510:intron | 30.0% | |
| TCTCTTATAAACACATTGTC+AGG | - | chr6_1:45473343-45473362 | None:intergenic | 30.0% | |
| CTCTTATAAACACATTGTCA+GGG | - | chr6_1:45473342-45473361 | None:intergenic | 30.0% | |
| TCTCTTATAAACACATTGTC+AGG | - | chr6_1:45473343-45473362 | None:intergenic | 30.0% | |
| TCTCTTATAAACACATTGTC+AGG | - | chr6_1:45473343-45473362 | None:intergenic | 30.0% | |
| CTCTTATAAACACATTGTCA+GGG | - | chr6_1:45473342-45473361 | None:intergenic | 30.0% | |
| TCTCTTATAAACACATTGTC+AGG | - | chr6_1:45473343-45473362 | None:intergenic | 30.0% | |
| CTGACAATGTGATTATAAGT+GGG | + | chr6_1:45473569-45473588 | Msa0886510:intron | 30.0% | |
| TGACAATGTGATTATAAGTG+GGG | + | chr6_1:45473570-45473589 | Msa0886510:intron | 30.0% | |
| !! | GCTTTTTGAAAATGCACATA+AGG | + | chr6_1:45473612-45473631 | Msa0886510:intron | 30.0% |
| CTGACAATGTGTTTATAAGT+GGG | + | chr6_1:45473735-45473754 | Msa0886510:intron | 30.0% | |
| TGACAATGTGTTTATAAGTG+GGG | + | chr6_1:45473093-45473112 | Msa0886510:intron | 30.0% | |
| !! | GCTTTTTGAAAATGCACATA+AGG | + | chr6_1:45473612-45473631 | Msa0886510:intron | 30.0% |
| CTGACAATGTGTTTATAAGT+GGG | + | chr6_1:45473735-45473754 | Msa0886510:intron | 30.0% | |
| TGACAATGTGTTTATAAGTG+GGG | + | chr6_1:45473093-45473112 | Msa0886510:intron | 30.0% | |
| !! | GCTTTTTGAAAATGCACATA+AGG | + | chr6_1:45473612-45473631 | Msa0886510:intron | 30.0% |
| !! | GCTTTTTGAAAATGCACATA+AGG | + | chr6_1:45473612-45473631 | Msa0886510:intron | 30.0% |
| AAGTAACTTTGTTGCACTTT+CGG | + | chr6_1:45474146-45474165 | Msa0886510:intron | 30.0% | |
| TTGCTCAAAACTTATGTGTA+AGG | - | chr6_1:45474224-45474243 | None:intergenic | 30.0% | |
| TCAATAGACGAATTAATGGT+TGG | - | chr6_1:45474269-45474288 | None:intergenic | 30.0% | |
| CCTCTCTCTATATATATTGA+CGG | + | chr6_1:45474319-45474338 | Msa0886510:intron | 30.0% | |
| ACGTTTACACAAGAAATTGA+TGG | - | chr6_1:45474396-45474415 | None:intergenic | 30.0% | |
| CTTCTCAAGAATTTGATCAT+CGG | + | chr6_1:45474497-45474516 | Msa0886510:intron | 30.0% | |
| ATACTCATTCATCACATTCA+AGG | - | chr6_1:45474678-45474697 | None:intergenic | 30.0% | |
| !!! | TTAGCAATTTTGGGACAAAA+GGG | - | chr6_1:45474790-45474809 | None:intergenic | 30.0% |
| ! | GTTTCAAAATGTTGCGATTT+TGG | - | chr6_1:45474871-45474890 | None:intergenic | 30.0% |
| !!! | TCGCAACATTTTGAAACTTA+AGG | + | chr6_1:45474874-45474893 | Msa0886510:intron | 30.0% |
| !!! | CGCAACATTTTGAAACTTAA+GGG | + | chr6_1:45474875-45474894 | Msa0886510:intron | 30.0% |
| TAAAAAACCCAGTTACTCTA+AGG | + | chr6_1:45475064-45475083 | Msa0886510:CDS | 30.0% | |
| ! | ACTTTCTTTTCGGTTGTATT+TGG | - | chr6_1:45475093-45475112 | None:intergenic | 30.0% |
| AACCGAAAAGAAAGTTACTT+GGG | + | chr6_1:45475098-45475117 | Msa0886510:CDS | 30.0% | |
| AAACCAGTGATTATGATGTT+TGG | + | chr6_1:45475124-45475143 | Msa0886510:CDS | 30.0% | |
| AAACCAAACATCATAATCAC+TGG | - | chr6_1:45475130-45475149 | None:intergenic | 30.0% | |
| !!! | TATGATGTTTGGTTTTGCAA+TGG | + | chr6_1:45475135-45475154 | Msa0886510:CDS | 30.0% |
| TGATTGTATTGGGTAAATGA+GGG | + | chr6_1:45475241-45475260 | Msa0886510:intron | 30.0% | |
| CTTCAGTAGTTTCTTTCAAA+GGG | - | chr6_1:45475281-45475300 | None:intergenic | 30.0% | |
| TCTTCAGTAGTTTCTTTCAA+AGG | - | chr6_1:45475282-45475301 | None:intergenic | 30.0% | |
| AACTACTGAAGAATATGAAG+AGG | + | chr6_1:45475290-45475309 | Msa0886510:CDS | 30.0% | |
| TTCCTAGAAACTATAGAAGA+CGG | - | chr6_1:45475393-45475412 | None:intergenic | 30.0% | |
| ! | GATTTCCTCAAATTTTCAAC+AGG | + | chr6_1:45475608-45475627 | Msa0886510:intron | 30.0% |
| ! | CTCTTTCAATGTATGTCTTT+TGG | - | chr6_1:45475730-45475749 | None:intergenic | 30.0% |
| ATACATTGAAAGAGATCACT+TGG | + | chr6_1:45475736-45475755 | Msa0886510:CDS | 30.0% | |
| TCTACATGATGTATTGTGAT+TGG | + | chr6_1:45476143-45476162 | Msa0886510:intron | 30.0% | |
| GTTAGAAAATTGCATCCATT+TGG | + | chr6_1:45476257-45476276 | Msa0886510:intron | 30.0% | |
| TGTTTCTTGGCAAATTCAAT+TGG | - | chr6_1:45476321-45476340 | None:intergenic | 30.0% | |
| AATCAATTTACACTAAGTGG+TGG | + | chr6_1:45476426-45476445 | Msa0886510:CDS | 30.0% | |
| AGATGGCAATTGAAAAATAG+CGG | - | chr6_1:45476608-45476627 | None:intergenic | 30.0% | |
| !! | GGTTTGTTAACGAATGTTTA+AGG | - | chr6_1:45476911-45476930 | None:intergenic | 30.0% |
| GAACTTGAACATCAGAACAA+TGG | + | chr6_1:45470019-45470038 | Msa0886510:CDS | 35.0% | |
| TATCCTTCAAGAAGGAAAAC+TGG | + | chr6_1:45470072-45470091 | Msa0886510:CDS | 35.0% | |
| ! | TTACCAGTTTTCCTTCTTGA+AGG | - | chr6_1:45470078-45470097 | None:intergenic | 35.0% |
| AAACCAGTGATTATGATGTC+TGG | + | chr6_1:45470569-45470588 | Msa0886510:CDS | 35.0% | |
| AAACCAGACATCATAATCAC+TGG | - | chr6_1:45470575-45470594 | None:intergenic | 35.0% | |
| !!! | TATGATGTCTGGTTTTGCAA+TGG | + | chr6_1:45470580-45470599 | Msa0886510:CDS | 35.0% |
| CTCTTTGATGTGATTGTACT+CGG | + | chr6_1:45470676-45470695 | Msa0886510:CDS | 35.0% | |
| CCATCACAAGTTTCTCTTAA+AGG | - | chr6_1:45470727-45470746 | None:intergenic | 35.0% | |
| ! | CCTTTAAGAGAAACTTGTGA+TGG | + | chr6_1:45470724-45470743 | Msa0886510:CDS | 35.0% |
| !! | CTTTTACCAGGTGATAATGA+AGG | - | chr6_1:45470772-45470791 | None:intergenic | 35.0% |
| CTTCATTATCACCTGGTAAA+AGG | + | chr6_1:45470770-45470789 | Msa0886510:CDS | 35.0% | |
| TTCTTACAAACCTTCACACA+AGG | - | chr6_1:45470811-45470830 | None:intergenic | 35.0% | |
| TTGTGTGAAGGTTTGTAAGA+AGG | + | chr6_1:45470810-45470829 | Msa0886510:CDS | 35.0% | |
| !!! | TTCGTGCTTAGCTTTTTTTG+TGG | + | chr6_1:45471002-45471021 | Msa0886510:intron | 35.0% |
| !!! | AGCTTTTTTTGTGGTGTAAC+AGG | + | chr6_1:45471011-45471030 | Msa0886510:intron | 35.0% |
| ATGCAAAAAAGTCCTTGTCA+TGG | - | chr6_1:45471103-45471122 | None:intergenic | 35.0% | |
| ! | ACACATTGAGAGAGATCTTT+TGG | + | chr6_1:45471139-45471158 | Msa0886510:CDS | 35.0% |
| ! | TTTGGTCCCCCTAAAATTTT+TGG | - | chr6_1:45471217-45471236 | None:intergenic | 35.0% |
| CATATGCACATGATGAAAGA+AGG | + | chr6_1:45471614-45471633 | Msa0886510:CDS | 35.0% | |
| ! | TAGAACATGGAATGCTGATT+TGG | + | chr6_1:45471664-45471683 | Msa0886510:CDS | 35.0% |
| AATTTGCACTAACAAGTGGT+TGG | + | chr6_1:45471705-45471724 | Msa0886510:CDS | 35.0% | |
| !!! | TGCTATTTTCTCTCTTGAAG+AGG | + | chr6_1:45471817-45471836 | Msa0886510:intron | 35.0% |
| TCGATAAAAAGATGCTTGGT+AGG | - | chr6_1:45472169-45472188 | None:intergenic | 35.0% | |
| CTAGTCGATAAAAAGATGCT+TGG | - | chr6_1:45472173-45472192 | None:intergenic | 35.0% | |
| ! | AAATTGTGACCTTGCGATTT+TGG | + | chr6_1:45472354-45472373 | Msa0886510:intron | 35.0% |
| ATTTATGTGTGAACTCTCTC+AGG | + | chr6_1:45472416-45472435 | Msa0886510:intron | 35.0% | |
| TTTATGTGTGAACTCTCTCA+GGG | + | chr6_1:45472417-45472436 | Msa0886510:intron | 35.0% | |
| ! | GAAGGATTGTTACTTCAAAG+AGG | + | chr6_1:45472455-45472474 | Msa0886510:CDS | 35.0% |
| TGATACTTGCCTATTGAAGA+TGG | + | chr6_1:45472479-45472498 | Msa0886510:CDS | 35.0% | |
| TCTAATCGACCATCTTCAAT+AGG | - | chr6_1:45472491-45472510 | None:intergenic | 35.0% | |
| TCATGATTGCAGACACAAAT+TGG | - | chr6_1:45472865-45472884 | None:intergenic | 35.0% | |
| TCTGCAATCATGAAAGAGAA+TGG | + | chr6_1:45472872-45472891 | Msa0886510:intron | 35.0% | |
| TATTGTTAAGAGTCCCACAT+CGG | + | chr6_1:45473057-45473076 | Msa0886510:intron | 35.0% | |
| TGTTTATAAGAGACCCACAT+CGG | + | chr6_1:45473374-45473393 | Msa0886510:intron | 35.0% | |
| TGTTTATAAGAGACCCACAT+CGG | + | chr6_1:45473374-45473393 | Msa0886510:intron | 35.0% | |
| CCACTTATAATCACATTGTC+AGG | - | chr6_1:45473571-45473590 | None:intergenic | 35.0% | |
| CCTGACAATGTGATTATAAG+TGG | + | chr6_1:45473568-45473587 | Msa0886510:intron | 35.0% | |
| CCACTTATAAACACATTGTC+AGG | - | chr6_1:45473737-45473756 | None:intergenic | 35.0% | |
| CCTGACAATGTGTTTATAAG+TGG | + | chr6_1:45473340-45473359 | Msa0886510:intron | 35.0% | |
| GACAATGTGTTTATAAGTGG+GGG | + | chr6_1:45473737-45473756 | Msa0886510:intron | 35.0% | |
| ACAATGTGTTTATAAGTGGG+GGG | + | chr6_1:45473738-45473757 | Msa0886510:intron | 35.0% | |
| ATGGGTATGTTATATTGTGC+TGG | + | chr6_1:45473809-45473828 | Msa0886510:intron | 35.0% | |
| CCACTTATAAACACATTGTC+AGG | - | chr6_1:45473737-45473756 | None:intergenic | 35.0% | |
| CCTGACAATGTGTTTATAAG+TGG | + | chr6_1:45473340-45473359 | Msa0886510:intron | 35.0% | |
| GACAATGTGTTTATAAGTGG+GGG | + | chr6_1:45473737-45473756 | Msa0886510:intron | 35.0% | |
| ACAATGTGTTTATAAGTGGG+GGG | + | chr6_1:45473738-45473757 | Msa0886510:intron | 35.0% | |
| CTGACAATGTGTTCATAAGT+GGG | + | chr6_1:45474044-45474063 | Msa0886510:intron | 35.0% | |
| TGACAATGTGTTCATAAGTG+GGG | + | chr6_1:45474045-45474064 | Msa0886510:intron | 35.0% | |
| GCACTTTCGGTAACAATATT+AGG | + | chr6_1:45474159-45474178 | Msa0886510:intron | 35.0% | |
| CCGTCAATATATATAGAGAG+AGG | - | chr6_1:45474322-45474341 | None:intergenic | 35.0% | |
| ATTTAGAAACGTTACAGGCA+TGG | + | chr6_1:45474357-45474376 | Msa0886510:intron | 35.0% | |
| !!! | CTCTACATAGTTTTGGTTAG+TGG | + | chr6_1:45474456-45474475 | Msa0886510:intron | 35.0% |
| GAATTTGATCATCGGAGTAT+TGG | + | chr6_1:45474505-45474524 | Msa0886510:intron | 35.0% | |
| ! | TTACCAGTTTTCCTTCTTGA+AGG | - | chr6_1:45470078-45470097 | None:intergenic | 35.0% |
| !!! | TAGCAATTTTGGGACAAAAG+GGG | - | chr6_1:45474789-45474808 | None:intergenic | 35.0% |
| !!! | CTTAGCAATTTTGGGACAAA+AGG | - | chr6_1:45474791-45474810 | None:intergenic | 35.0% |
| ! | GACGTCTTCTTAGCAATTTT+GGG | - | chr6_1:45474799-45474818 | None:intergenic | 35.0% |
| ! | TGACGTCTTCTTAGCAATTT+TGG | - | chr6_1:45474800-45474819 | None:intergenic | 35.0% |
| TGTCTTCTCACAAAACCTAA+GGG | - | chr6_1:45475033-45475052 | None:intergenic | 35.0% | |
| ATGTCTTCTCACAAAACCTA+AGG | - | chr6_1:45475034-45475053 | None:intergenic | 35.0% | |
| !! | TAGGTTTTGTGAGAAGACAT+TGG | + | chr6_1:45475034-45475053 | Msa0886510:CDS | 35.0% |
| CAACCGAAAAGAAAGTTACT+TGG | + | chr6_1:45475097-45475116 | Msa0886510:CDS | 35.0% | |
| ! | CTCCCAAGTAACTTTCTTTT+CGG | - | chr6_1:45475103-45475122 | None:intergenic | 35.0% |
| !!! | ATGTTTGGTTTTGCAATGGT+TGG | + | chr6_1:45475139-45475158 | Msa0886510:CDS | 35.0% |
| GTGATTGTATTGGGTAAATG+AGG | + | chr6_1:45475240-45475259 | Msa0886510:intron | 35.0% | |
| TATGAAATCTTGCATGTGCT+TGG | - | chr6_1:45475467-45475486 | None:intergenic | 35.0% | |
| TAAAGATGTGGACAATGGTT+AGG | + | chr6_1:45475491-45475510 | Msa0886510:intron | 35.0% | |
| ! | ATGTCTTTTGGATCACACAA+AGG | - | chr6_1:45475718-45475737 | None:intergenic | 35.0% |
| AATGAAATTGACCAAATGGG+TGG | - | chr6_1:45475887-45475906 | None:intergenic | 35.0% | |
| !!! | TCACTTTTTATAACGTGGAG+AGG | - | chr6_1:45475957-45475976 | None:intergenic | 35.0% |
| AATTTACACTAAGTGGTGGT+TGG | + | chr6_1:45476430-45476449 | Msa0886510:CDS | 35.0% | |
| !!! | TGCTATTTTCTCTCTCGAAA+AGG | + | chr6_1:45476542-45476561 | Msa0886510:CDS | 35.0% |
| !! | TAAAGTCAAAGAGTGTCAAG+AGG | - | chr6_1:45476659-45476678 | None:intergenic | 35.0% |
| TGCATTGAACACACAAGTTA+CGG | - | chr6_1:45476698-45476717 | None:intergenic | 35.0% | |
| ! | CTACATGTGTTGTGTTTCTA+TGG | - | chr6_1:45476997-45477016 | None:intergenic | 35.0% |
| !!! | GCTTCAGTTCTCTTTTTTTG+AGG | + | chr6_1:45477070-45477089 | Msa0886510:intron | 35.0% |
| TTACACTACCACTATTGATG+AGG | - | chr6_1:45477152-45477171 | None:intergenic | 35.0% | |
| TGAATTAGTTATGTTGGTGC+AGG | + | chr6_1:45477349-45477368 | Msa0886510:intron | 35.0% | |
| AGATACTTGTCTCTTGAAGA+TGG | + | chr6_1:45477423-45477442 | Msa0886510:CDS | 35.0% | |
| CATGCAAGTATCCTTCAAGA+AGG | + | chr6_1:45470064-45470083 | Msa0886510:CDS | 40.0% | |
| ! | AAGTGCCAATAAGTTTTGCG+AGG | + | chr6_1:45470470-45470489 | Msa0886510:CDS | 40.0% |
| TAACAAACCCAGTCACTCTA+AGG | + | chr6_1:45470509-45470528 | Msa0886510:CDS | 40.0% | |
| !!! | ATGTCTGGTTTTGCAATGGT+TGG | + | chr6_1:45470584-45470603 | Msa0886510:CDS | 40.0% |
| GTGATTGTACTCGGTAAATG+CGG | + | chr6_1:45470685-45470704 | Msa0886510:CDS | 40.0% | |
| AAGGATCCTTCATTATCACC+TGG | + | chr6_1:45470763-45470782 | Msa0886510:CDS | 40.0% | |
| !! | GGAGATTTTAGCCTTTTACC+AGG | - | chr6_1:45470784-45470803 | None:intergenic | 40.0% |
| GAAGGTGAAAATCAACCCTA+AGG | + | chr6_1:45470828-45470847 | Msa0886510:CDS | 40.0% | |
| CGAAAAATTCAGCCATGACA+AGG | + | chr6_1:45471088-45471107 | Msa0886510:CDS | 40.0% | |
| ! | GCTGAAGTACTCGATTAAAG+CGG | - | chr6_1:45472147-45472166 | None:intergenic | 40.0% |
| GACTTGCGTGAATTTGCAAA+AGG | - | chr6_1:45472923-45472942 | None:intergenic | 40.0% | |
| ! | TGCACATAAGGTTGACTTCA+TGG | + | chr6_1:45473624-45473643 | Msa0886510:intron | 40.0% |
| ! | GCACATAAGGTTGACTTCAT+GGG | + | chr6_1:45473625-45473644 | Msa0886510:intron | 40.0% |
| ! | TGCACATAAGGTTGACTTCA+TGG | + | chr6_1:45473624-45473643 | Msa0886510:intron | 40.0% |
| ! | GCACATAAGGTTGACTTCAT+GGG | + | chr6_1:45473625-45473644 | Msa0886510:intron | 40.0% |
| ! | TTATATTGTGCTGGTCGTGA+GGG | + | chr6_1:45473818-45473837 | Msa0886510:intron | 40.0% |
| ! | TGCACATAAGGTTGACTTCA+TGG | + | chr6_1:45473624-45473643 | Msa0886510:intron | 40.0% |
| ! | GCACATAAGGTTGACTTCAT+GGG | + | chr6_1:45473625-45473644 | Msa0886510:intron | 40.0% |
| CCACTTATGAACACATTGTC+AGG | - | chr6_1:45474046-45474065 | None:intergenic | 40.0% | |
| CCTGACAATGTGTTCATAAG+TGG | + | chr6_1:45474043-45474062 | Msa0886510:intron | 40.0% | |
| GACAATGTGTTCATAAGTGG+GGG | + | chr6_1:45474046-45474065 | Msa0886510:intron | 40.0% | |
| ACAATGTGTTCATAAGTGGG+GGG | + | chr6_1:45474047-45474066 | Msa0886510:intron | 40.0% | |
| ! | TGCACATAAGGTTGACTTCA+TGG | + | chr6_1:45473624-45473643 | Msa0886510:intron | 40.0% |
| ! | GCACATAAGGTTGACTTCAT+GGG | + | chr6_1:45473625-45473644 | Msa0886510:intron | 40.0% |
| CTTCAAAGTAGCCTTCAAGA+AGG | + | chr6_1:45474550-45474569 | Msa0886510:intron | 40.0% | |
| TAGCCTTCAAGAAGGAAAAC+TGG | + | chr6_1:45474558-45474577 | Msa0886510:intron | 40.0% | |
| CTCATTCATCACATTCAAGG+AGG | - | chr6_1:45474675-45474694 | None:intergenic | 40.0% | |
| !! | GTATGACAGAAAGTACCCTT+AGG | + | chr6_1:45475015-45475034 | Msa0886510:intron | 40.0% |
| TTTGTGAGAAGACATTGGCA+AGG | + | chr6_1:45475039-45475058 | Msa0886510:CDS | 40.0% | |
| TTGGAAGCCTTAGAGTAACT+GGG | - | chr6_1:45475074-45475093 | None:intergenic | 40.0% | |
| TTTGGAAGCCTTAGAGTAAC+TGG | - | chr6_1:45475075-45475094 | None:intergenic | 40.0% | |
| !!! | TTGGTTTTGCAATGGTTGGA+AGG | + | chr6_1:45475143-45475162 | Msa0886510:CDS | 40.0% |
| GAAACTATAGAAGACGGTGA+AGG | - | chr6_1:45475387-45475406 | None:intergenic | 40.0% | |
| CACCGTCTTCTATAGTTTCT+AGG | + | chr6_1:45475388-45475407 | Msa0886510:CDS | 40.0% | |
| CAGAAGATAGGAGTTTCTTG+GGG | - | chr6_1:45475864-45475883 | None:intergenic | 40.0% | |
| GCAGAAGATAGGAGTTTCTT+GGG | - | chr6_1:45475865-45475884 | None:intergenic | 40.0% | |
| CATCATGTGCAGATGTTTCT+TGG | - | chr6_1:45476334-45476353 | None:intergenic | 40.0% | |
| CAAGAAACATCTGCACATGA+TGG | + | chr6_1:45476332-45476351 | Msa0886510:CDS | 40.0% | |
| ! | AAACATCTGCACATGATGGA+AGG | + | chr6_1:45476336-45476355 | Msa0886510:CDS | 40.0% |
| CGAGAGAGAAAATAGCAACT+TGG | - | chr6_1:45476539-45476558 | None:intergenic | 40.0% | |
| !! | ATGAGCACTCCCTATTTTGA+AGG | + | chr6_1:45476567-45476586 | Msa0886510:CDS | 40.0% |
| ACTACCACTATTGATGAGGT+CGG | - | chr6_1:45477148-45477167 | None:intergenic | 40.0% | |
| ! | TGCCAATAAGTTTTGCGAGG+AGG | + | chr6_1:45470473-45470492 | Msa0886510:CDS | 45.0% |
| TGCCTCCTCGCAAAACTTAT+TGG | - | chr6_1:45470478-45470497 | None:intergenic | 45.0% | |
| !! | TAAGTTTTGCGAGGAGGCAT+TGG | + | chr6_1:45470479-45470498 | Msa0886510:CDS | 45.0% |
| TTGGAAGCCTTAGAGTGACT+GGG | - | chr6_1:45470519-45470538 | None:intergenic | 45.0% | |
| TTTGGAAGCCTTAGAGTGAC+TGG | - | chr6_1:45470520-45470539 | None:intergenic | 45.0% | |
| ATCTCCATCACCTTGTGTGA+AGG | + | chr6_1:45470798-45470817 | Msa0886510:CDS | 45.0% | |
| CAAACCTTCACACAAGGTGA+TGG | - | chr6_1:45470805-45470824 | None:intergenic | 45.0% | |
| CTCTCTCAATGTGTGTCTTC+TGG | - | chr6_1:45471133-45471152 | None:intergenic | 45.0% | |
| GTCGTACAAAGAGTCTAGAG+AGG | - | chr6_1:45471962-45471981 | None:intergenic | 45.0% | |
| !! | GGGTTGGCTAGAATTTGTGA+AGG | + | chr6_1:45472437-45472456 | Msa0886510:intron | 45.0% |
| TTAAGAGTCCCACATCGGAT+AGG | + | chr6_1:45473062-45473081 | Msa0886510:intron | 45.0% | |
| AGTCATCACCTATCCGATGT+GGG | - | chr6_1:45473073-45473092 | None:intergenic | 45.0% | |
| AAGTCATCACCTATCCGATG+TGG | - | chr6_1:45473074-45473093 | None:intergenic | 45.0% | |
| GTAATCCTTACCTCACAAGC+TGG | + | chr6_1:45473116-45473135 | Msa0886510:intron | 45.0% | |
| CAAAACCAGCTTGTGAGGTA+AGG | - | chr6_1:45473124-45473143 | None:intergenic | 45.0% | |
| !!! | TACCTCACAAGCTGGTTTTG+TGG | + | chr6_1:45473124-45473143 | Msa0886510:intron | 45.0% |
| !!! | ACCTCACAAGCTGGTTTTGT+GGG | + | chr6_1:45473125-45473144 | Msa0886510:intron | 45.0% |
| !!! | TGGTTTTGTGGGGTTGTGTT+AGG | + | chr6_1:45473136-45473155 | Msa0886510:intron | 45.0% |
| TGGCTCAATGGATCTTTGAG+AGG | - | chr6_1:45473193-45473212 | None:intergenic | 45.0% | |
| TGCTATCAGGTTTCCGCTAT+CGG | + | chr6_1:45473215-45473234 | Msa0886510:intron | 45.0% | |
| GGTTCGTGGACATAAATGGT+GGG | - | chr6_1:45473245-45473264 | None:intergenic | 45.0% | |
| TGGTTCGTGGACATAAATGG+TGG | - | chr6_1:45473246-45473265 | None:intergenic | 45.0% | |
| ! | GCTTGGTTCGTGGACATAAA+TGG | - | chr6_1:45473249-45473268 | None:intergenic | 45.0% |
| ! | CACTATTGGGCTTGGTTCTT+GGG | - | chr6_1:45473271-45473290 | None:intergenic | 45.0% |
| GTGTGTTAAGAGACCCACAT+CGG | + | chr6_1:45473306-45473325 | Msa0886510:intron | 45.0% | |
| GGACATCACATATCCGATGT+GGG | - | chr6_1:45473322-45473341 | None:intergenic | 45.0% | |
| AGGACATCACATATCCGATG+TGG | - | chr6_1:45473323-45473342 | None:intergenic | 45.0% | |
| GGTTCGTGGACATAAATGGT+GGG | - | chr6_1:45473245-45473264 | None:intergenic | 45.0% | |
| TGGTTCGTGGACATAAATGG+TGG | - | chr6_1:45473246-45473265 | None:intergenic | 45.0% | |
| ! | GCTTGGTTCGTGGACATAAA+TGG | - | chr6_1:45473249-45473268 | None:intergenic | 45.0% |
| GTGTGTTAAGAGACCCACAT+CGG | + | chr6_1:45473306-45473325 | Msa0886510:intron | 45.0% | |
| GGACATCACATATCCGATGT+GGG | - | chr6_1:45473322-45473341 | None:intergenic | 45.0% | |
| AGGACATCACATATCCGATG+TGG | - | chr6_1:45473323-45473342 | None:intergenic | 45.0% | |
| GGACATCACATATCCGATGT+GGG | - | chr6_1:45473322-45473341 | None:intergenic | 45.0% | |
| AGGACATCACATATCCGATG+TGG | - | chr6_1:45473323-45473342 | None:intergenic | 45.0% | |
| ! | TGTTAAATGTGCTGGTCGTG+AGG | + | chr6_1:45473661-45473680 | Msa0886510:intron | 45.0% |
| ! | GTTAAATGTGCTGGTCGTGA+GGG | + | chr6_1:45473662-45473681 | Msa0886510:intron | 45.0% |
| ! | TTAAATGTGCTGGTCGTGAG+GGG | + | chr6_1:45473663-45473682 | Msa0886510:intron | 45.0% |
| GTGTGTTAAGAGACCCACAT+CGG | + | chr6_1:45473306-45473325 | Msa0886510:intron | 45.0% | |
| GGACATCACATATCCGATGT+GGG | - | chr6_1:45473322-45473341 | None:intergenic | 45.0% | |
| AGGACATCACATATCCGATG+TGG | - | chr6_1:45473323-45473342 | None:intergenic | 45.0% | |
| ! | GTTATATTGTGCTGGTCGTG+AGG | + | chr6_1:45473817-45473836 | Msa0886510:intron | 45.0% |
| ! | TATATTGTGCTGGTCGTGAG+GGG | + | chr6_1:45473819-45473838 | Msa0886510:intron | 45.0% |
| GTGTGTTAAGAGACCCACAT+CGG | + | chr6_1:45473306-45473325 | Msa0886510:intron | 45.0% | |
| GGACATCACATATCCGATGT+GGG | - | chr6_1:45473322-45473341 | None:intergenic | 45.0% | |
| AGGACATCACATATCCGATG+TGG | - | chr6_1:45473323-45473342 | None:intergenic | 45.0% | |
| ! | TGTTAAATGTGCTGGTCGTG+AGG | + | chr6_1:45473661-45473680 | Msa0886510:intron | 45.0% |
| ! | GTTAAATGTGCTGGTCGTGA+GGG | + | chr6_1:45473662-45473681 | Msa0886510:intron | 45.0% |
| ! | TTAAATGTGCTGGTCGTGAG+GGG | + | chr6_1:45473663-45473682 | Msa0886510:intron | 45.0% |
| GTGTGTTAAGAGACCCACAT+CGG | + | chr6_1:45473306-45473325 | Msa0886510:intron | 45.0% | |
| GGACATCACATATCCGATGT+GGG | - | chr6_1:45473322-45473341 | None:intergenic | 45.0% | |
| AGGACATCACATATCCGATG+TGG | - | chr6_1:45473323-45473342 | None:intergenic | 45.0% | |
| ACGTCACGTGTCCCAAAAAA+AGG | + | chr6_1:45474814-45474833 | Msa0886510:intron | 45.0% | |
| CGTCACGTGTCCCAAAAAAA+GGG | + | chr6_1:45474815-45474834 | Msa0886510:intron | 45.0% | |
| GTCACGTGTCCCAAAAAAAG+GGG | + | chr6_1:45474816-45474835 | Msa0886510:intron | 45.0% | |
| TCACGTGTCCCAAAAAAAGG+GGG | + | chr6_1:45474817-45474836 | Msa0886510:intron | 45.0% | |
| !!! | AAAGGTGGCCCCCTTTTTTT+GGG | - | chr6_1:45474828-45474847 | None:intergenic | 45.0% |
| ! | GAAGACGGTGAAGGAGATTT+TGG | - | chr6_1:45475378-45475397 | None:intergenic | 45.0% |
| GGCAGAAGATAGGAGTTTCT+TGG | - | chr6_1:45475866-45475885 | None:intergenic | 45.0% | |
| ! | GCACATGATGGAAGGAAGAA+AGG | + | chr6_1:45476344-45476363 | Msa0886510:CDS | 45.0% |
| AGAACCGACCTCATCAATAG+TGG | + | chr6_1:45477141-45477160 | Msa0886510:intron | 45.0% | |
| GGTGCAGGAAGAAAAGTTAG+TGG | + | chr6_1:45477364-45477383 | Msa0886510:intron | 45.0% | |
| TCTCTTGAAGATGGTCGATG+AGG | + | chr6_1:45477432-45477451 | Msa0886510:CDS | 45.0% | |
| !! | TAAAAAAAAAAAAAAAAACT+TGG | - | chr6_1:45472977-45472996 | None:intergenic | 5.0% |
| !!! | AAATTTTCATTTTTTAAATA+GGG | - | chr6_1:45474764-45474783 | None:intergenic | 5.0% |
| !! | TAAGAAATAATATATTAAAA+TGG | - | chr6_1:45476106-45476125 | None:intergenic | 5.0% |
| !! | TAAATAAAAAAGAATTTATT+TGG | - | chr6_1:45476810-45476829 | None:intergenic | 5.0% |
| !! | TAAAAAATTATTCATTAAAA+AGG | - | chr6_1:45476867-45476886 | None:intergenic | 5.0% |
| TGTGTGAACTCTCTCAGGGT+TGG | + | chr6_1:45472421-45472440 | Msa0886510:intron | 50.0% | |
| !!! | CCTCACAAGCTGGTTTTGTG+GGG | + | chr6_1:45473126-45473145 | Msa0886510:intron | 50.0% |
| !! | GATAGCGGAAACCTGATAGC+AGG | - | chr6_1:45473216-45473235 | None:intergenic | 50.0% |
| GCTATCAGGTTTCCGCTATC+GGG | + | chr6_1:45473216-45473235 | Msa0886510:intron | 50.0% | |
| ! | TCGTGGACATAAATGGTGGG+TGG | - | chr6_1:45473242-45473261 | None:intergenic | 50.0% |
| ! | GCACTATTGGGCTTGGTTCT+TGG | - | chr6_1:45473272-45473291 | None:intergenic | 50.0% |
| AGAACCAAGCCCAATAGTGC+TGG | + | chr6_1:45473272-45473291 | Msa0886510:intron | 50.0% | |
| !! | CGATAGCGGAAATCCGATGT+GGG | - | chr6_1:45473390-45473409 | None:intergenic | 50.0% |
| CCACATCGGATTTCCGCTAT+CGG | + | chr6_1:45473388-45473407 | Msa0886510:intron | 50.0% | |
| CACATCGGATTTCCGCTATC+GGG | + | chr6_1:45473389-45473408 | Msa0886510:intron | 50.0% | |
| ! | TCGTGGACATAAATGGTGGG+TGG | - | chr6_1:45473242-45473261 | None:intergenic | 50.0% |
| !!! | CAAAGGTGGCCCCCTTTTTT+TGG | - | chr6_1:45474829-45474848 | None:intergenic | 50.0% |
| CTCTTACCTCGCGATGATGA+AGG | - | chr6_1:45475354-45475373 | None:intergenic | 50.0% | |
| CTTCATCATCGCGAGGTAAG+AGG | + | chr6_1:45475352-45475371 | Msa0886510:CDS | 50.0% | |
| CCAAATGGGTGGCAGAAGAT+AGG | - | chr6_1:45475876-45475895 | None:intergenic | 50.0% | |
| CCTATCTTCTGCCACCCATT+TGG | + | chr6_1:45475873-45475892 | Msa0886510:intron | 50.0% | |
| !! | TTTGCGAGGAGGCATTGGCA+AGG | + | chr6_1:45470484-45470503 | Msa0886510:CDS | 55.0% |
| CCCCACAAAACCAGCTTGTG+AGG | - | chr6_1:45473129-45473148 | None:intergenic | 55.0% | |
| CCTGATAGCAGGTGGCTCAA+TGG | - | chr6_1:45473205-45473224 | None:intergenic | 55.0% | |
| CCATTGAGCCACCTGCTATC+AGG | + | chr6_1:45473202-45473221 | Msa0886510:intron | 55.0% | |
| AGCGGAAACCTGATAGCAGG+TGG | - | chr6_1:45473213-45473232 | None:intergenic | 55.0% | |
| ! | TGGTTCTTGGGCTTGGTTCG+TGG | - | chr6_1:45473259-45473278 | None:intergenic | 55.0% |
| ! | TTGGGCTTGGTTCTTGGGCT+TGG | - | chr6_1:45473266-45473285 | None:intergenic | 55.0% |
| ACGACCAGCACTATTGGGCT+TGG | - | chr6_1:45473279-45473298 | None:intergenic | 55.0% | |
| CCCTCACGACCAGCACTATT+GGG | - | chr6_1:45473284-45473303 | None:intergenic | 55.0% | |
| !! | CCCAATAGTGCTGGTCGTGA+GGG | + | chr6_1:45473281-45473300 | Msa0886510:intron | 55.0% |
| !! | CCAATAGTGCTGGTCGTGAG+GGG | + | chr6_1:45473282-45473301 | Msa0886510:intron | 55.0% |
| !! | CCGATAGCGGAAATCCGATG+TGG | - | chr6_1:45473391-45473410 | None:intergenic | 55.0% |
| ! | GCACTATTGGGCTTGGTTCG+TGG | - | chr6_1:45473432-45473451 | None:intergenic | 55.0% |
| CGAACCAAGCCCAATAGTGC+TGG | + | chr6_1:45473432-45473451 | Msa0886510:intron | 55.0% | |
| ACGACCAGCACTATTGGGCT+TGG | - | chr6_1:45473279-45473298 | None:intergenic | 55.0% | |
| CCCTCACGACCAGCACTATT+GGG | - | chr6_1:45473284-45473303 | None:intergenic | 55.0% | |
| !! | CCCAATAGTGCTGGTCGTGA+GGG | + | chr6_1:45473281-45473300 | Msa0886510:intron | 55.0% |
| !! | CCAATAGTGCTGGTCGTGAG+GGG | + | chr6_1:45473282-45473301 | Msa0886510:intron | 55.0% |
| GACGATCCTTCATCATCGCG+AGG | + | chr6_1:45475345-45475364 | Msa0886510:CDS | 55.0% | |
| !! | AATGGTGGGTGGCCCGATAG+CGG | - | chr6_1:45473231-45473250 | None:intergenic | 60.0% |
| !! | GCCCAATAGTGCTGGTCGTG+AGG | + | chr6_1:45473280-45473299 | Msa0886510:intron | 60.0% |
| CCCCTCACGACCAGCACTAT+TGG | - | chr6_1:45473285-45473304 | None:intergenic | 60.0% | |
| !! | AATGGTGGGTGGCCCGATAG+CGG | - | chr6_1:45473231-45473250 | None:intergenic | 60.0% |
| !! | GCCCAATAGTGCTGGTCGTG+AGG | + | chr6_1:45473280-45473299 | Msa0886510:intron | 60.0% |
| CCCCTCACGACCAGCACTAT+TGG | - | chr6_1:45473285-45473304 | None:intergenic | 60.0% | |
| ! | AATGTGCTGGTCGTGAGGGG+TGG | + | chr6_1:45473666-45473685 | Msa0886510:intron | 60.0% |
| ! | AATGTGCTGGTCGTGAGGGG+TGG | + | chr6_1:45473666-45473685 | Msa0886510:intron | 60.0% |
| GTCGTGAGGGGTGGTCGTGA+GGG | + | chr6_1:45473675-45473694 | Msa0886510:intron | 65.0% | |
| GTCGTGAGGGGTGGTCGTGA+GGG | + | chr6_1:45473675-45473694 | Msa0886510:intron | 65.0% | |
| TCGTGAGGGGTGGTCGTGAG+GGG | + | chr6_1:45473676-45473695 | Msa0886510:intron | 65.0% | |
| GGTCGTGAGGGGTGGTCGTG+AGG | + | chr6_1:45473674-45473693 | Msa0886510:intron | 70.0% | |
| GGTCGTGAGGGGTGGTCGTG+AGG | + | chr6_1:45473674-45473693 | Msa0886510:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 45470007 | 45477498 | 45470007 | ID=Msa0886510;Name=Msa0886510 |
| chr6_1 | mRNA | 45470007 | 45477498 | 45470007 | ID=Msa0886510-mRNA-1;Parent=Msa0886510;Name=Msa0886510-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|0.9|1|1|10|0|596 |
| chr6_1 | exon | 45470007 | 45470093 | 45470007 | ID=Msa0886510-mRNA-1:exon:9732;Parent=Msa0886510-mRNA-1 |
| chr6_1 | exon | 45470469 | 45470928 | 45470469 | ID=Msa0886510-mRNA-1:exon:9733;Parent=Msa0886510-mRNA-1 |
| chr6_1 | exon | 45471033 | 45471160 | 45471033 | ID=Msa0886510-mRNA-1:exon:9734;Parent=Msa0886510-mRNA-1 |
| chr6_1 | exon | 45471587 | 45471766 | 45471587 | ID=Msa0886510-mRNA-1:exon:9735;Parent=Msa0886510-mRNA-1 |
| chr6_1 | exon | 45472438 | 45472500 | 45472438 | ID=Msa0886510-mRNA-1:exon:9736;Parent=Msa0886510-mRNA-1 |
| chr6_1 | exon | 45475024 | 45475189 | 45475024 | ID=Msa0886510-mRNA-1:exon:9737;Parent=Msa0886510-mRNA-1 |
| chr6_1 | exon | 45475289 | 45475507 | 45475289 | ID=Msa0886510-mRNA-1:exon:9738;Parent=Msa0886510-mRNA-1 |
| chr6_1 | exon | 45475630 | 45475757 | 45475630 | ID=Msa0886510-mRNA-1:exon:9739;Parent=Msa0886510-mRNA-1 |
| chr6_1 | exon | 45476312 | 45476588 | 45476312 | ID=Msa0886510-mRNA-1:exon:9740;Parent=Msa0886510-mRNA-1 |
| chr6_1 | exon | 45477416 | 45477498 | 45477416 | ID=Msa0886510-mRNA-1:exon:9741;Parent=Msa0886510-mRNA-1 |
| chr6_1 | CDS | 45470007 | 45470093 | 45470007 | ID=Msa0886510-mRNA-1:cds;Parent=Msa0886510-mRNA-1 |
| chr6_1 | CDS | 45470469 | 45470928 | 45470469 | ID=Msa0886510-mRNA-1:cds;Parent=Msa0886510-mRNA-1 |
| chr6_1 | CDS | 45471033 | 45471160 | 45471033 | ID=Msa0886510-mRNA-1:cds;Parent=Msa0886510-mRNA-1 |
| chr6_1 | CDS | 45471587 | 45471766 | 45471587 | ID=Msa0886510-mRNA-1:cds;Parent=Msa0886510-mRNA-1 |
| chr6_1 | CDS | 45472438 | 45472500 | 45472438 | ID=Msa0886510-mRNA-1:cds;Parent=Msa0886510-mRNA-1 |
| chr6_1 | CDS | 45475024 | 45475189 | 45475024 | ID=Msa0886510-mRNA-1:cds;Parent=Msa0886510-mRNA-1 |
| chr6_1 | CDS | 45475289 | 45475507 | 45475289 | ID=Msa0886510-mRNA-1:cds;Parent=Msa0886510-mRNA-1 |
| chr6_1 | CDS | 45475630 | 45475757 | 45475630 | ID=Msa0886510-mRNA-1:cds;Parent=Msa0886510-mRNA-1 |
| chr6_1 | CDS | 45476312 | 45476588 | 45476312 | ID=Msa0886510-mRNA-1:cds;Parent=Msa0886510-mRNA-1 |
| chr6_1 | CDS | 45477416 | 45477498 | 45477416 | ID=Msa0886510-mRNA-1:cds;Parent=Msa0886510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
