Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0890090 | XP_039683216.1 | 64.317 | 454 | 128 | 1 | 194 | 613 | 57 | 510 | 0.0 | 626 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0890090 | sp|Q9SZL8|FRS5_ARATH | 30.159 | 441 | 261 | 9 | 215 | 612 | 77 | 513 | 1.95e-52 | 196 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0890090 | A0A396J342 | 64.097 | 454 | 129 | 1 | 194 | 613 | 58 | 511 | 0.0 | 621 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0890090 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0890090 | MtrunA17_Chr2g0287651 | 64.097 | 454 | 129 | 1 | 194 | 613 | 58 | 511 | 0.0 | 621 |
| Msa0890090 | MtrunA17_Chr1g0203051 | 35.271 | 499 | 278 | 5 | 154 | 612 | 19 | 512 | 9.68e-96 | 307 |
| Msa0890090 | MtrunA17_Chr5g0448761 | 29.694 | 458 | 275 | 8 | 215 | 627 | 64 | 519 | 1.63e-52 | 193 |
| Msa0890090 | MtrunA17_Chr1g0202341 | 28.246 | 439 | 269 | 8 | 210 | 607 | 50 | 483 | 1.98e-50 | 186 |
| Msa0890090 | MtrunA17_Chr2g0324011 | 28.802 | 434 | 265 | 5 | 215 | 608 | 14 | 443 | 9.38e-49 | 179 |
| Msa0890090 | MtrunA17_Chr8g0363841 | 28.211 | 436 | 267 | 8 | 219 | 613 | 25 | 455 | 1.97e-48 | 180 |
| Msa0890090 | MtrunA17_Chr5g0441581 | 26.386 | 451 | 277 | 7 | 215 | 625 | 36 | 471 | 1.14e-47 | 178 |
| Msa0890090 | MtrunA17_Chr3g0082121 | 28.791 | 455 | 267 | 8 | 215 | 626 | 47 | 487 | 5.03e-47 | 176 |
| Msa0890090 | MtrunA17_Chr3g0080351 | 27.088 | 443 | 247 | 10 | 210 | 601 | 75 | 492 | 2.21e-44 | 170 |
| Msa0890090 | MtrunA17_Chr2g0296781 | 27.002 | 437 | 274 | 7 | 215 | 613 | 1 | 430 | 2.50e-44 | 169 |
| Msa0890090 | MtrunA17_Chr1g0207551 | 26.256 | 438 | 277 | 6 | 215 | 612 | 38 | 469 | 1.36e-42 | 164 |
| Msa0890090 | MtrunA17_Chr1g0203721 | 27.027 | 444 | 276 | 9 | 208 | 608 | 61 | 499 | 4.87e-42 | 163 |
| Msa0890090 | MtrunA17_Chr1g0198761 | 27.294 | 436 | 260 | 10 | 217 | 600 | 53 | 483 | 3.12e-40 | 157 |
| Msa0890090 | MtrunA17_Chr6g0458391 | 25.466 | 483 | 284 | 12 | 183 | 620 | 202 | 653 | 9.64e-39 | 152 |
| Msa0890090 | MtrunA17_Chr6g0458391 | 28.571 | 224 | 145 | 8 | 128 | 342 | 2 | 219 | 5.50e-14 | 75.5 |
| Msa0890090 | MtrunA17_Chr2g0276841 | 26.728 | 434 | 269 | 9 | 212 | 600 | 72 | 501 | 7.17e-38 | 149 |
| Msa0890090 | MtrunA17_Chr6g0477261 | 27.852 | 298 | 177 | 3 | 354 | 613 | 22 | 319 | 1.76e-36 | 145 |
| Msa0890090 | MtrunA17_Chr5g0431001 | 28.235 | 425 | 246 | 12 | 217 | 588 | 67 | 485 | 6.36e-36 | 141 |
| Msa0890090 | MtrunA17_Chr2g0329031 | 25.117 | 426 | 266 | 9 | 215 | 600 | 18 | 430 | 1.10e-35 | 143 |
| Msa0890090 | MtrunA17_Chr2g0294841 | 25.155 | 485 | 285 | 13 | 173 | 593 | 2 | 472 | 1.62e-31 | 130 |
| Msa0890090 | MtrunA17_Chr2g0291591 | 25.272 | 459 | 291 | 9 | 198 | 615 | 52 | 499 | 3.40e-31 | 128 |
| Msa0890090 | MtrunA17_Chr2g0291581 | 25.740 | 439 | 258 | 11 | 215 | 608 | 75 | 490 | 6.96e-30 | 125 |
| Msa0890090 | MtrunA17_Chr2g0287061 | 25.307 | 407 | 206 | 11 | 216 | 574 | 188 | 544 | 7.76e-29 | 122 |
| Msa0890090 | MtrunA17_Chr1g0196541 | 23.543 | 446 | 276 | 9 | 215 | 612 | 1 | 429 | 2.10e-28 | 120 |
| Msa0890090 | MtrunA17_Chr1g0164591 | 27.508 | 309 | 176 | 5 | 297 | 566 | 8 | 307 | 9.55e-27 | 111 |
| Msa0890090 | MtrunA17_Chr5g0448511 | 28.626 | 262 | 146 | 6 | 391 | 612 | 16 | 276 | 1.82e-25 | 110 |
| Msa0890090 | MtrunA17_Chr2g0290391 | 23.349 | 424 | 265 | 8 | 215 | 583 | 55 | 473 | 6.69e-25 | 109 |
| Msa0890090 | MtrunA17_Chr7g0258861 | 29.289 | 239 | 167 | 2 | 215 | 453 | 14 | 250 | 2.33e-22 | 98.2 |
| Msa0890090 | MtrunA17_Chr8g0389811 | 35.507 | 138 | 85 | 2 | 179 | 312 | 48 | 185 | 8.79e-20 | 88.2 |
| Msa0890090 | MtrunA17_Chr5g0440451 | 21.956 | 501 | 297 | 16 | 179 | 612 | 10 | 483 | 1.62e-19 | 93.2 |
| Msa0890090 | MtrunA17_Chr2g0308841 | 36.275 | 102 | 65 | 0 | 511 | 612 | 4 | 105 | 5.58e-19 | 87.4 |
| Msa0890090 | MtrunA17_Chr1g0171741 | 28.054 | 221 | 137 | 5 | 132 | 341 | 53 | 262 | 7.95e-17 | 80.9 |
| Msa0890090 | MtrunA17_Chr1g0149131 | 34.862 | 109 | 66 | 1 | 459 | 562 | 2 | 110 | 2.51e-14 | 70.1 |
| Msa0890090 | MtrunA17_Chr8g0340801 | 33.945 | 109 | 70 | 1 | 322 | 430 | 1 | 107 | 2.60e-14 | 69.3 |
| Msa0890090 | MtrunA17_Chr6g0473421 | 41.250 | 80 | 47 | 0 | 207 | 286 | 51 | 130 | 8.61e-14 | 69.3 |
| Msa0890090 | MtrunA17_Chr2g0329361 | 39.252 | 107 | 63 | 2 | 208 | 313 | 58 | 163 | 1.96e-12 | 67.8 |
| Msa0890090 | MtrunA17_Chr2g0331371 | 30.534 | 131 | 91 | 0 | 207 | 337 | 51 | 181 | 3.28e-12 | 66.2 |
| Msa0890090 | MtrunA17_Chr6g0451441 | 27.734 | 256 | 162 | 9 | 136 | 385 | 15 | 253 | 3.81e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0890090 | AT4G38180.1 | 30.159 | 441 | 261 | 9 | 215 | 612 | 77 | 513 | 1.98e-53 | 196 |
| Msa0890090 | AT4G15090.1 | 27.790 | 439 | 272 | 7 | 215 | 612 | 55 | 489 | 4.90e-51 | 189 |
| Msa0890090 | AT4G15090.5 | 27.790 | 439 | 272 | 7 | 215 | 612 | 55 | 489 | 4.90e-51 | 189 |
| Msa0890090 | AT4G15090.3 | 27.790 | 439 | 272 | 7 | 215 | 612 | 55 | 489 | 4.90e-51 | 189 |
| Msa0890090 | AT4G15090.2 | 27.790 | 439 | 272 | 7 | 215 | 612 | 55 | 489 | 4.90e-51 | 189 |
| Msa0890090 | AT4G15090.4 | 27.790 | 439 | 272 | 7 | 215 | 612 | 55 | 489 | 4.90e-51 | 189 |
| Msa0890090 | AT3G22170.2 | 26.044 | 503 | 293 | 10 | 154 | 601 | 9 | 487 | 2.58e-44 | 170 |
| Msa0890090 | AT3G22170.1 | 26.044 | 503 | 293 | 10 | 154 | 601 | 9 | 487 | 2.58e-44 | 170 |
| Msa0890090 | AT1G10240.2 | 25.786 | 477 | 284 | 12 | 193 | 615 | 24 | 484 | 8.21e-37 | 146 |
| Msa0890090 | AT1G10240.1 | 25.786 | 477 | 284 | 12 | 193 | 615 | 24 | 484 | 8.21e-37 | 146 |
| Msa0890090 | AT1G76320.2 | 26.136 | 440 | 269 | 9 | 215 | 612 | 1 | 426 | 7.88e-35 | 141 |
| Msa0890090 | AT1G76320.1 | 25.909 | 440 | 270 | 9 | 215 | 612 | 1 | 426 | 9.35e-35 | 140 |
| Msa0890090 | AT1G76320.4 | 25.909 | 440 | 270 | 9 | 215 | 612 | 1 | 426 | 9.35e-35 | 140 |
| Msa0890090 | AT1G76320.3 | 25.909 | 440 | 270 | 9 | 215 | 612 | 1 | 426 | 1.80e-34 | 139 |
| Msa0890090 | AT3G06250.2 | 27.708 | 397 | 206 | 10 | 208 | 566 | 187 | 540 | 1.26e-33 | 137 |
| Msa0890090 | AT3G06250.1 | 27.708 | 397 | 206 | 10 | 208 | 566 | 187 | 540 | 1.26e-33 | 137 |
| Msa0890090 | AT3G06250.3 | 27.708 | 397 | 206 | 10 | 208 | 566 | 187 | 540 | 1.26e-33 | 137 |
| Msa0890090 | AT1G52520.1 | 26.786 | 448 | 272 | 10 | 209 | 617 | 84 | 514 | 1.08e-32 | 134 |
| Msa0890090 | AT4G19990.3 | 23.182 | 440 | 245 | 8 | 216 | 601 | 26 | 426 | 1.31e-30 | 128 |
| Msa0890090 | AT4G19990.4 | 23.182 | 440 | 245 | 8 | 216 | 601 | 26 | 426 | 1.31e-30 | 128 |
| Msa0890090 | AT4G19990.5 | 23.182 | 440 | 245 | 8 | 216 | 601 | 26 | 426 | 1.67e-30 | 127 |
| Msa0890090 | AT4G19990.7 | 23.182 | 440 | 245 | 8 | 216 | 601 | 40 | 440 | 1.96e-30 | 127 |
| Msa0890090 | AT4G19990.6 | 23.182 | 440 | 245 | 8 | 216 | 601 | 26 | 426 | 2.20e-30 | 127 |
| Msa0890090 | AT4G19990.2 | 23.182 | 440 | 245 | 8 | 216 | 601 | 26 | 426 | 2.20e-30 | 127 |
| Msa0890090 | AT5G18960.2 | 26.817 | 399 | 208 | 13 | 209 | 566 | 209 | 564 | 1.12e-27 | 119 |
| Msa0890090 | AT5G18960.1 | 26.817 | 399 | 208 | 13 | 209 | 566 | 209 | 564 | 1.12e-27 | 119 |
| Msa0890090 | AT1G80010.1 | 25.107 | 466 | 276 | 15 | 215 | 624 | 99 | 547 | 7.69e-25 | 110 |
| Msa0890090 | AT4G19990.1 | 24.324 | 259 | 156 | 3 | 383 | 601 | 111 | 369 | 1.05e-23 | 106 |
| Msa0890090 | AT2G27110.2 | 23.967 | 484 | 282 | 16 | 171 | 612 | 19 | 458 | 5.71e-23 | 104 |
| Msa0890090 | AT2G27110.1 | 23.967 | 484 | 282 | 16 | 171 | 612 | 19 | 458 | 5.71e-23 | 104 |
| Msa0890090 | AT5G28530.1 | 22.406 | 424 | 274 | 8 | 212 | 583 | 57 | 477 | 1.13e-20 | 97.1 |
| Msa0890090 | AT5G28530.3 | 22.406 | 424 | 274 | 8 | 212 | 583 | 57 | 477 | 1.16e-20 | 97.1 |
| Msa0890090 | AT5G28530.2 | 22.406 | 424 | 274 | 8 | 212 | 583 | 57 | 477 | 1.16e-20 | 97.1 |
| Msa0890090 | AT5G28530.5 | 22.656 | 384 | 259 | 11 | 212 | 583 | 57 | 414 | 1.01e-17 | 87.4 |
| Msa0890090 | AT5G28530.4 | 22.656 | 384 | 259 | 11 | 212 | 583 | 57 | 414 | 1.16e-17 | 87.4 |
| Msa0890090 | AT3G07500.1 | 39.806 | 103 | 58 | 3 | 215 | 316 | 37 | 136 | 6.79e-12 | 65.9 |
Find 120 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGACTTTACGGATTT+TGG | 0.057115 | 6_1:+62001125 | Msa0890090:CDS |
| AGGATGAATTTGAAGAGTTT+TGG | 0.187483 | 6_1:+62002775 | Msa0890090:CDS |
| GACGTTTGAAATGTCTATTT+TGG | 0.234421 | 6_1:+62002356 | Msa0890090:CDS |
| AATAAGAACTTGTCATATAA+TGG | 0.247315 | 6_1:+62002144 | Msa0890090:CDS |
| TGTTCACTACAGACCCAAAA+AGG | 0.266221 | 6_1:+62001985 | Msa0890090:CDS |
| CCATCTGTTACAACTGCTTT+TGG | 0.274383 | 6_1:-62002600 | None:intergenic |
| TTCTTTGTTCTCATATGTTT+TGG | 0.278033 | 6_1:-62002844 | None:intergenic |
| TGCATTTACACCCTATTTAT+CGG | 0.291021 | 6_1:+62002071 | Msa0890090:CDS |
| TGCTGAAGGAATAGGGAAAA+TGG | 0.297126 | 6_1:+62001736 | Msa0890090:CDS |
| AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 6_1:+62001359 | Msa0890090:CDS |
| TCATTAACTGCTGAAGGAAT+AGG | 0.321133 | 6_1:+62001728 | Msa0890090:CDS |
| AAACAACAACAATGACTTTA+CGG | 0.325210 | 6_1:+62001118 | Msa0890090:CDS |
| TACCTGCCTGATGATTTCTT+TGG | 0.332675 | 6_1:+62002882 | Msa0890090:CDS |
| CTGTTAGGAAGAGTGATATT+AGG | 0.334658 | 6_1:+62001822 | Msa0890090:CDS |
| TTCTATGAGGGAGGCGATAA+AGG | 0.353001 | 6_1:+62002629 | Msa0890090:CDS |
| GGGATACATGGTGGCTCAAA+AGG | 0.370177 | 6_1:+62002165 | Msa0890090:CDS |
| AAGAATTATGTTAGGAAGAA+AGG | 0.371620 | 6_1:+62002951 | Msa0890090:CDS |
| CATTGGTTGGAGTAGGTTCA+TGG | 0.373380 | 6_1:-62002045 | None:intergenic |
| CATTAACTGCTGAAGGAATA+GGG | 0.396181 | 6_1:+62001729 | Msa0890090:CDS |
| CTGCCTGATGATTTCTTTGG+TGG | 0.400085 | 6_1:+62002885 | Msa0890090:CDS |
| AGATCAGATTATTTCCGCTT+TGG | 0.400822 | 6_1:+62002394 | Msa0890090:CDS |
| ATAAGAACTTGTCATATAAT+GGG | 0.403187 | 6_1:+62002145 | Msa0890090:CDS |
| AGCATTTATCAAGGTTAGAT+AGG | 0.409294 | 6_1:+62001912 | Msa0890090:CDS |
| GCTCAAAAGGGTGGATATCC+TGG | 0.436706 | 6_1:+62002178 | Msa0890090:CDS |
| CATAGACGGTGACGCGTACT+TGG | 0.438217 | 6_1:-62002660 | None:intergenic |
| CGCAGATGAGTTGTCAGCAC+TGG | 0.438979 | 6_1:-62003069 | None:intergenic |
| AAACATATTCGATGATTGTT+GGG | 0.443184 | 6_1:+62001195 | Msa0890090:CDS |
| TGTAGGTGTTGGTGAGGAAA+TGG | 0.443787 | 6_1:+62001694 | Msa0890090:CDS |
| GATCATAGTGCTGGTGATAA+AGG | 0.445730 | 6_1:+62001383 | Msa0890090:CDS |
| GAGAGAAGAAGCATTTATCA+AGG | 0.445750 | 6_1:+62001903 | Msa0890090:CDS |
| AAATCATAAAGAATTATGTT+AGG | 0.452282 | 6_1:+62002943 | Msa0890090:CDS |
| GTAGAACCGTAGTCGTGTTC+CGG | 0.454566 | 6_1:-62001152 | None:intergenic |
| ACAAAATCACCAACGGATAG+TGG | 0.461754 | 6_1:-62002459 | None:intergenic |
| AATAAGTACGGTAAGTGTAA+AGG | 0.462842 | 6_1:+62001794 | Msa0890090:CDS |
| TAGTGAACACGGAGCCTAGC+TGG | 0.466097 | 6_1:-62001971 | None:intergenic |
| AGCATTCTTGTTCAGATGCC+AGG | 0.467369 | 6_1:-62002685 | None:intergenic |
| GATGAGCGATATGATGAAAC+TGG | 0.468588 | 6_1:+62001326 | Msa0890090:CDS |
| GAAACATATTCGATGATTGT+TGG | 0.474938 | 6_1:+62001194 | Msa0890090:CDS |
| GTAGATAAAGCACAGGTTGA+TGG | 0.480167 | 6_1:+62002106 | Msa0890090:CDS |
| CAGCACTGGGGATGAAAACC+TGG | 0.482290 | 6_1:-62003055 | None:intergenic |
| ATACCACCAAAGAAATCATC+AGG | 0.486764 | 6_1:-62002888 | None:intergenic |
| CGCGTCACCGTCTATGTGCC+TGG | 0.486998 | 6_1:+62002667 | Msa0890090:CDS |
| GATATTAGGCGCAATGTTCA+CGG | 0.503464 | 6_1:+62001836 | Msa0890090:CDS |
| AAGGGTGGATATCCTGGTGT+TGG | 0.510155 | 6_1:+62002184 | Msa0890090:CDS |
| ATATGAGAACAAAGAATTGT+GGG | 0.511340 | 6_1:+62002851 | Msa0890090:CDS |
| AAGAATACTCAAGGGAATAC+AGG | 0.512005 | 6_1:+62001302 | Msa0890090:CDS |
| GAATATTCTGCCACTGATGA+CGG | 0.512577 | 6_1:+62002334 | Msa0890090:CDS |
| GCAGATGAGTTGTCAGCACT+GGG | 0.512778 | 6_1:-62003068 | None:intergenic |
| GGTACACCGGAACACGACTA+CGG | 0.517131 | 6_1:+62001146 | Msa0890090:CDS |
| ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 6_1:+62001722 | Msa0890090:CDS |
| CAGATGGTGATGGTTCTATG+AGG | 0.523380 | 6_1:+62002616 | Msa0890090:CDS |
| CAGTATGTATGCAACAAGCA+TGG | 0.523908 | 6_1:+62001875 | Msa0890090:CDS |
| TAACCCATGGATTGTTCTCA+AGG | 0.524044 | 6_1:-62002821 | None:intergenic |
| AGGGTGGATATCCTGGTGTT+GGG | 0.526124 | 6_1:+62002185 | Msa0890090:CDS |
| ATGCGTGTTGTTATTAAGGA+TGG | 0.526641 | 6_1:+62002247 | Msa0890090:CDS |
| GAAGGTGAATGTGATGAAGA+TGG | 0.536706 | 6_1:+62001551 | Msa0890090:CDS |
| CGACTACGGTTCTACGGAGG+TGG | 0.544305 | 6_1:+62001160 | Msa0890090:CDS |
| TCGATGATTGTTGGGAGTGG+TGG | 0.548458 | 6_1:+62001203 | Msa0890090:CDS |
| CACCAAAGAAATCATCAGGC+AGG | 0.551460 | 6_1:-62002884 | None:intergenic |
| CATATGAGAACAAAGAATTG+TGG | 0.552735 | 6_1:+62002850 | Msa0890090:CDS |
| TTGTCATATAATGGGATACA+TGG | 0.555297 | 6_1:+62002153 | Msa0890090:CDS |
| GCATCTGAACAAGAATGCTA+TGG | 0.558088 | 6_1:+62002689 | Msa0890090:CDS |
| TTATTTCCGCTTTGGCGATG+TGG | 0.559830 | 6_1:+62002402 | Msa0890090:CDS |
| TGTTCTGGTGATCATAGTGC+TGG | 0.560345 | 6_1:+62001374 | Msa0890090:CDS |
| TGTAAATGCACAACATTGGT+TGG | 0.560698 | 6_1:-62002058 | None:intergenic |
| GGATACATGGTGGCTCAAAA+GGG | 0.561217 | 6_1:+62002166 | Msa0890090:CDS |
| GGAACACGACTACGGTTCTA+CGG | 0.562931 | 6_1:+62001154 | Msa0890090:CDS |
| AGTATGTATGCAACAAGCAT+GGG | 0.568514 | 6_1:+62001876 | Msa0890090:CDS |
| ATTGCCTTGAGAACAATCCA+TGG | 0.571273 | 6_1:+62002817 | Msa0890090:CDS |
| GTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 6_1:+62001699 | Msa0890090:CDS |
| GATGAAAGTGAAGGTGATGA+AGG | 0.577534 | 6_1:+62001428 | Msa0890090:CDS |
| TACATGGTGGCTCAAAAGGG+TGG | 0.582602 | 6_1:+62002169 | Msa0890090:CDS |
| TTCTTAGTGAACCCAACACC+AGG | 0.588199 | 6_1:-62002196 | None:intergenic |
| CCAAAAGCAGTTGTAACAGA+TGG | 0.588696 | 6_1:+62002600 | Msa0890090:CDS |
| GATGAAGGTGAACGTGATGA+AGG | 0.589312 | 6_1:+62001443 | Msa0890090:CDS |
| GATGAAAGTGAAGGTGATGA+AGG | 0.589312 | 6_1:+62001473 | Msa0890090:CDS |
| GATGAAAGTGAAGGTGATGA+AGG | 0.589312 | 6_1:+62001503 | Msa0890090:CDS |
| GATGAAAGTGAAGGTGATGA+AGG | 0.589312 | 6_1:+62001533 | Msa0890090:CDS |
| GGTGATAAAGGTGAAGATGA+TGG | 0.589452 | 6_1:+62001395 | Msa0890090:CDS |
| TTGCCTTGAGAACAATCCAT+GGG | 0.599082 | 6_1:+62002818 | Msa0890090:CDS |
| ATCCGAGGTAGATAAAGCAC+AGG | 0.601471 | 6_1:+62002099 | Msa0890090:CDS |
| AACCTGTGCTTTATCTACCT+CGG | 0.604864 | 6_1:-62002101 | None:intergenic |
| GGAGACAATGAAAGTGATGA+TGG | 0.609236 | 6_1:+62001347 | Msa0890090:CDS |
| AGGGTGTAAATGCACAACAT+TGG | 0.610800 | 6_1:-62002062 | None:intergenic |
| AGTGAAGGTCATGGTAGTGA+AGG | 0.614950 | 6_1:+62001644 | Msa0890090:CDS |
| GCAGTTGTAACAGATGGTGA+TGG | 0.618869 | 6_1:+62002606 | Msa0890090:CDS |
| TGATGATGTAGGTGTTGGTG+AGG | 0.620318 | 6_1:+62001688 | Msa0890090:CDS |
| TATTCGATGATTGTTGGGAG+TGG | 0.624025 | 6_1:+62001200 | Msa0890090:CDS |
| TTTCAAACGTCCGTCATCAG+TGG | 0.632560 | 6_1:-62002344 | None:intergenic |
| TGCACAACATTGGTTGGAGT+AGG | 0.634569 | 6_1:-62002052 | None:intergenic |
| TCAGATGCCAGGCACATAGA+CGG | 0.634730 | 6_1:-62002674 | None:intergenic |
| AGATGGTGATGGTTCTATGA+GGG | 0.637450 | 6_1:+62002617 | Msa0890090:CDS |
| GAAGATGATGATGTAGGTGT+TGG | 0.638090 | 6_1:+62001683 | Msa0890090:CDS |
| GGTGAAGATGATGGAAGTGA+AGG | 0.642775 | 6_1:+62001404 | Msa0890090:CDS |
| GAACAAATACCACTATCCGT+TGG | 0.644673 | 6_1:+62002450 | Msa0890090:CDS |
| CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 6_1:+62001957 | Msa0890090:CDS |
| TGGTGATGGTTCTATGAGGG+AGG | 0.649015 | 6_1:+62002620 | Msa0890090:CDS |
| TTAGCTGAAGATGATGATGT+AGG | 0.661814 | 6_1:+62001677 | Msa0890090:CDS |
| TATGAGGGAGGCGATAAAGG+CGG | 0.662119 | 6_1:+62002632 | Msa0890090:CDS |
| ATGCAACCACATCGCCAAAG+CGG | 0.665966 | 6_1:-62002408 | None:intergenic |
| TTCACGGTGAGATTGTAATG+AGG | 0.666757 | 6_1:+62001852 | Msa0890090:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 6_1:+62001590 | Msa0890090:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 6_1:+62001635 | Msa0890090:CDS |
| TCATATAATGGGATACATGG+TGG | 0.669224 | 6_1:+62002156 | Msa0890090:CDS |
| GATGATGATGATGTGAGTCA+TGG | 0.679569 | 6_1:+62001269 | Msa0890090:CDS |
| ACTTTGTACGAGTGAGACGT+CGG | 0.685988 | 6_1:-62001946 | None:intergenic |
| AGTGAAGTTGATGAAAGTGA+AGG | 0.694719 | 6_1:+62001614 | Msa0890090:CDS |
| TATTTATCGGAAAATATCCG+AGG | 0.705763 | 6_1:+62002084 | Msa0890090:CDS |
| GACAATGAAAGTGATGATGG+TGG | 0.706532 | 6_1:+62001350 | Msa0890090:CDS |
| GTTGATGGTCTTCAGTCACA+CGG | 0.708259 | 6_1:+62002121 | Msa0890090:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 6_1:+62001584 | Msa0890090:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 6_1:+62001629 | Msa0890090:CDS |
| GGTGAATGTGATGAAGATGG+AGG | 0.722290 | 6_1:+62001554 | Msa0890090:CDS |
| GATGGAGGTGATGAAAGTGA+AGG | 0.727165 | 6_1:+62001569 | Msa0890090:CDS |
| ACACGACTACGGTTCTACGG+AGG | 0.734804 | 6_1:+62001157 | Msa0890090:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.739796 | 6_1:+62001419 | Msa0890090:CDS |
| GGTGAACGTGATGAAAGTGA+AGG | 0.739796 | 6_1:+62001464 | Msa0890090:CDS |
| GGTGAACGTGATGAAAGTGA+AGG | 0.739796 | 6_1:+62001494 | Msa0890090:CDS |
| GGTGAACGTGATGAAAGTGA+AGG | 0.739796 | 6_1:+62001524 | Msa0890090:CDS |
| CAGATGAGTTGTCAGCACTG+GGG | 0.773409 | 6_1:-62003067 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACGATTTTTATAATAAGTA+CGG | + | chr6_1:62001782-62001801 | Msa0890090:CDS | 15.0% |
| !! | AAATCATAAAGAATTATGTT+AGG | + | chr6_1:62002943-62002962 | Msa0890090:CDS | 15.0% |
| !!! | TACGATTTTTATAATAAGTA+CGG | + | chr6_1:62001782-62001801 | Msa0890090:CDS | 15.0% |
| !! | AAATCATAAAGAATTATGTT+AGG | + | chr6_1:62002943-62002962 | Msa0890090:CDS | 15.0% |
| !!! | AAAACATATATACCCTTTTT+GGG | - | chr6_1:62002001-62002020 | None:intergenic | 20.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | + | chr6_1:62002144-62002163 | Msa0890090:CDS | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | + | chr6_1:62002145-62002164 | Msa0890090:CDS | 20.0% |
| !! | AAACAATAGAAACTTATATG+TGG | + | chr6_1:62002539-62002558 | Msa0890090:intron | 20.0% |
| !! | AACAATAGAAACTTATATGT+GGG | + | chr6_1:62002540-62002559 | Msa0890090:intron | 20.0% |
| !!! | AAAACATATATACCCTTTTT+GGG | - | chr6_1:62002001-62002020 | None:intergenic | 20.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | + | chr6_1:62002144-62002163 | Msa0890090:CDS | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | + | chr6_1:62002145-62002164 | Msa0890090:CDS | 20.0% |
| !! | AAACAATAGAAACTTATATG+TGG | + | chr6_1:62002539-62002558 | Msa0890090:intron | 20.0% |
| !! | AACAATAGAAACTTATATGT+GGG | + | chr6_1:62002540-62002559 | Msa0890090:intron | 20.0% |
| ! | AAACAACAACAATGACTTTA+CGG | + | chr6_1:62001118-62001137 | Msa0890090:CDS | 25.0% |
| ! | AAACATATTCGATGATTGTT+GGG | + | chr6_1:62001195-62001214 | Msa0890090:CDS | 25.0% |
| !! | AATTTTACGAAGAATACTCA+AGG | + | chr6_1:62001293-62001312 | Msa0890090:CDS | 25.0% |
| !! | ATTTTACGAAGAATACTCAA+GGG | + | chr6_1:62001294-62001313 | Msa0890090:CDS | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | + | chr6_1:62001722-62001741 | Msa0890090:CDS | 25.0% |
| !! | CAAAACATATATACCCTTTT+TGG | - | chr6_1:62002002-62002021 | None:intergenic | 25.0% |
| !!! | TGTTTTGTCTATTTTTGAAG+AGG | + | chr6_1:62002015-62002034 | Msa0890090:CDS | 25.0% |
| !!! | GTTTTGTCTATTTTTGAAGA+GGG | + | chr6_1:62002016-62002035 | Msa0890090:CDS | 25.0% |
| !! | AAAAATGCGTGTTGTTATTA+AGG | + | chr6_1:62002243-62002262 | Msa0890090:CDS | 25.0% |
| ! | GAATATTCAAAAAAGGAATG+TGG | - | chr6_1:62002322-62002341 | None:intergenic | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | + | chr6_1:62002357-62002376 | Msa0890090:CDS | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+CGG | + | chr6_1:62002752-62002771 | Msa0890090:CDS | 25.0% |
| !! | TTCTTTGTTCTCATATGTTT+TGG | - | chr6_1:62002847-62002866 | None:intergenic | 25.0% |
| ! | ATATGAGAACAAAGAATTGT+GGG | + | chr6_1:62002851-62002870 | Msa0890090:CDS | 25.0% |
| ! | AAGAATTATGTTAGGAAGAA+AGG | + | chr6_1:62002951-62002970 | Msa0890090:CDS | 25.0% |
| !!! | ATTTCTGCATAATTTTGATG+AGG | + | chr6_1:62002986-62003005 | Msa0890090:CDS | 25.0% |
| !!! | TGTAGTTGATTTTAAAATCC+AGG | + | chr6_1:62003037-62003056 | Msa0890090:CDS | 25.0% |
| ! | AAACAACAACAATGACTTTA+CGG | + | chr6_1:62001118-62001137 | Msa0890090:CDS | 25.0% |
| ! | AAACATATTCGATGATTGTT+GGG | + | chr6_1:62001195-62001214 | Msa0890090:CDS | 25.0% |
| !! | AATTTTACGAAGAATACTCA+AGG | + | chr6_1:62001293-62001312 | Msa0890090:CDS | 25.0% |
| !! | ATTTTACGAAGAATACTCAA+GGG | + | chr6_1:62001294-62001313 | Msa0890090:CDS | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | + | chr6_1:62001722-62001741 | Msa0890090:CDS | 25.0% |
| !! | CAAAACATATATACCCTTTT+TGG | - | chr6_1:62002002-62002021 | None:intergenic | 25.0% |
| !!! | TGTTTTGTCTATTTTTGAAG+AGG | + | chr6_1:62002015-62002034 | Msa0890090:CDS | 25.0% |
| !!! | GTTTTGTCTATTTTTGAAGA+GGG | + | chr6_1:62002016-62002035 | Msa0890090:CDS | 25.0% |
| !! | AAAAATGCGTGTTGTTATTA+AGG | + | chr6_1:62002243-62002262 | Msa0890090:CDS | 25.0% |
| ! | GAATATTCAAAAAAGGAATG+TGG | - | chr6_1:62002322-62002341 | None:intergenic | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | + | chr6_1:62002357-62002376 | Msa0890090:CDS | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+CGG | + | chr6_1:62002752-62002771 | Msa0890090:CDS | 25.0% |
| !! | TTCTTTGTTCTCATATGTTT+TGG | - | chr6_1:62002847-62002866 | None:intergenic | 25.0% |
| ! | ATATGAGAACAAAGAATTGT+GGG | + | chr6_1:62002851-62002870 | Msa0890090:CDS | 25.0% |
| ! | AAGAATTATGTTAGGAAGAA+AGG | + | chr6_1:62002951-62002970 | Msa0890090:CDS | 25.0% |
| !!! | ATTTCTGCATAATTTTGATG+AGG | + | chr6_1:62002986-62003005 | Msa0890090:CDS | 25.0% |
| !!! | TGTAGTTGATTTTAAAATCC+AGG | + | chr6_1:62003037-62003056 | Msa0890090:CDS | 25.0% |
| ! | AACAATGACTTTACGGATTT+TGG | + | chr6_1:62001125-62001144 | Msa0890090:CDS | 30.0% |
| GAAACATATTCGATGATTGT+TGG | + | chr6_1:62001194-62001213 | Msa0890090:CDS | 30.0% | |
| AATAAGTACGGTAAGTGTAA+AGG | + | chr6_1:62001794-62001813 | Msa0890090:CDS | 30.0% | |
| ! | AGTGTAAAGGTTTTACTGTT+AGG | + | chr6_1:62001807-62001826 | Msa0890090:CDS | 30.0% |
| AGCATTTATCAAGGTTAGAT+AGG | + | chr6_1:62001912-62001931 | Msa0890090:CDS | 30.0% | |
| TGCATTTACACCCTATTTAT+CGG | + | chr6_1:62002071-62002090 | Msa0890090:CDS | 30.0% | |
| ! | CGGATATTTTCCGATAAATA+GGG | - | chr6_1:62002084-62002103 | None:intergenic | 30.0% |
| ! | TCGGATATTTTCCGATAAAT+AGG | - | chr6_1:62002085-62002104 | None:intergenic | 30.0% |
| TATTTATCGGAAAATATCCG+AGG | + | chr6_1:62002084-62002103 | Msa0890090:CDS | 30.0% | |
| ! | TTGTCATATAATGGGATACA+TGG | + | chr6_1:62002153-62002172 | Msa0890090:CDS | 30.0% |
| AGTGGCAGAATATTCAAAAA+AGG | - | chr6_1:62002329-62002348 | None:intergenic | 30.0% | |
| !! | GACGTTTGAAATGTCTATTT+TGG | + | chr6_1:62002356-62002375 | Msa0890090:CDS | 30.0% |
| CAAATATAACTGTTTGTGAG+TGG | - | chr6_1:62002498-62002517 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | + | chr6_1:62002496-62002515 | Msa0890090:intron | 30.0% | |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | + | chr6_1:62002568-62002587 | Msa0890090:intron | 30.0% |
| !!! | TGTCAAGAATTCAGCTTTTT+TGG | + | chr6_1:62002716-62002735 | Msa0890090:CDS | 30.0% |
| !!! | AAGAATTCAGCTTTTTTGGA+TGG | + | chr6_1:62002720-62002739 | Msa0890090:CDS | 30.0% |
| ! | AATGTACTCTAATTTTACGG+AGG | + | chr6_1:62002755-62002774 | Msa0890090:CDS | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | + | chr6_1:62002775-62002794 | Msa0890090:CDS | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | + | chr6_1:62002776-62002795 | Msa0890090:CDS | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | + | chr6_1:62002777-62002796 | Msa0890090:CDS | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | + | chr6_1:62002778-62002797 | Msa0890090:CDS | 30.0% |
| CATATGAGAACAAAGAATTG+TGG | + | chr6_1:62002850-62002869 | Msa0890090:CDS | 30.0% | |
| ! | AACAATGACTTTACGGATTT+TGG | + | chr6_1:62001125-62001144 | Msa0890090:CDS | 30.0% |
| GAAACATATTCGATGATTGT+TGG | + | chr6_1:62001194-62001213 | Msa0890090:CDS | 30.0% | |
| AATAAGTACGGTAAGTGTAA+AGG | + | chr6_1:62001794-62001813 | Msa0890090:CDS | 30.0% | |
| ! | AGTGTAAAGGTTTTACTGTT+AGG | + | chr6_1:62001807-62001826 | Msa0890090:CDS | 30.0% |
| AGCATTTATCAAGGTTAGAT+AGG | + | chr6_1:62001912-62001931 | Msa0890090:CDS | 30.0% | |
| TGCATTTACACCCTATTTAT+CGG | + | chr6_1:62002071-62002090 | Msa0890090:CDS | 30.0% | |
| ! | CGGATATTTTCCGATAAATA+GGG | - | chr6_1:62002084-62002103 | None:intergenic | 30.0% |
| ! | TCGGATATTTTCCGATAAAT+AGG | - | chr6_1:62002085-62002104 | None:intergenic | 30.0% |
| TATTTATCGGAAAATATCCG+AGG | + | chr6_1:62002084-62002103 | Msa0890090:CDS | 30.0% | |
| ! | TTGTCATATAATGGGATACA+TGG | + | chr6_1:62002153-62002172 | Msa0890090:CDS | 30.0% |
| AGTGGCAGAATATTCAAAAA+AGG | - | chr6_1:62002329-62002348 | None:intergenic | 30.0% | |
| !! | GACGTTTGAAATGTCTATTT+TGG | + | chr6_1:62002356-62002375 | Msa0890090:CDS | 30.0% |
| CAAATATAACTGTTTGTGAG+TGG | - | chr6_1:62002498-62002517 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | + | chr6_1:62002496-62002515 | Msa0890090:intron | 30.0% | |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | + | chr6_1:62002568-62002587 | Msa0890090:intron | 30.0% |
| !!! | TGTCAAGAATTCAGCTTTTT+TGG | + | chr6_1:62002716-62002735 | Msa0890090:CDS | 30.0% |
| !!! | AAGAATTCAGCTTTTTTGGA+TGG | + | chr6_1:62002720-62002739 | Msa0890090:CDS | 30.0% |
| ! | AATGTACTCTAATTTTACGG+AGG | + | chr6_1:62002755-62002774 | Msa0890090:CDS | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | + | chr6_1:62002775-62002794 | Msa0890090:CDS | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | + | chr6_1:62002776-62002795 | Msa0890090:CDS | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | + | chr6_1:62002777-62002796 | Msa0890090:CDS | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | + | chr6_1:62002778-62002797 | Msa0890090:CDS | 30.0% |
| CATATGAGAACAAAGAATTG+TGG | + | chr6_1:62002850-62002869 | Msa0890090:CDS | 30.0% | |
| AAGAATACTCAAGGGAATAC+AGG | + | chr6_1:62001302-62001321 | Msa0890090:CDS | 35.0% | |
| !! | AGTGAAGTTGATGAAAGTGA+AGG | + | chr6_1:62001614-62001633 | Msa0890090:CDS | 35.0% |
| ! | TTAGCTGAAGATGATGATGT+AGG | + | chr6_1:62001677-62001696 | Msa0890090:CDS | 35.0% |
| TCATTAACTGCTGAAGGAAT+AGG | + | chr6_1:62001728-62001747 | Msa0890090:CDS | 35.0% | |
| CATTAACTGCTGAAGGAATA+GGG | + | chr6_1:62001729-62001748 | Msa0890090:CDS | 35.0% | |
| CTGTTAGGAAGAGTGATATT+AGG | + | chr6_1:62001822-62001841 | Msa0890090:CDS | 35.0% | |
| AGTATGTATGCAACAAGCAT+GGG | + | chr6_1:62001876-62001895 | Msa0890090:CDS | 35.0% | |
| !! | GAGAGAAGAAGCATTTATCA+AGG | + | chr6_1:62001903-62001922 | Msa0890090:CDS | 35.0% |
| TGTAAATGCACAACATTGGT+TGG | - | chr6_1:62002061-62002080 | None:intergenic | 35.0% | |
| ! | TCATATAATGGGATACATGG+TGG | + | chr6_1:62002156-62002175 | Msa0890090:CDS | 35.0% |
| ! | ATGCGTGTTGTTATTAAGGA+TGG | + | chr6_1:62002247-62002266 | Msa0890090:CDS | 35.0% |
| !! | AAATGTCTATTTTGGGCAGA+TGG | + | chr6_1:62002364-62002383 | Msa0890090:CDS | 35.0% |
| AGATCAGATTATTTCCGCTT+TGG | + | chr6_1:62002394-62002413 | Msa0890090:CDS | 35.0% | |
| !! | AGTTATATTTGGTGCTGCAT+TGG | + | chr6_1:62002507-62002526 | Msa0890090:intron | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | + | chr6_1:62002567-62002586 | Msa0890090:intron | 35.0% |
| TCCCATACAATCTAGAAAAC+TGG | - | chr6_1:62002572-62002591 | None:intergenic | 35.0% | |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | + | chr6_1:62002779-62002798 | Msa0890090:CDS | 35.0% |
| !!! | TCATATGTTTTGGTAACCCA+TGG | - | chr6_1:62002837-62002856 | None:intergenic | 35.0% |
| ATACCACCAAAGAAATCATC+AGG | - | chr6_1:62002891-62002910 | None:intergenic | 35.0% | |
| AAGAATACTCAAGGGAATAC+AGG | + | chr6_1:62001302-62001321 | Msa0890090:CDS | 35.0% | |
| !! | AGTGAAGTTGATGAAAGTGA+AGG | + | chr6_1:62001614-62001633 | Msa0890090:CDS | 35.0% |
| ! | TTAGCTGAAGATGATGATGT+AGG | + | chr6_1:62001677-62001696 | Msa0890090:CDS | 35.0% |
| TCATTAACTGCTGAAGGAAT+AGG | + | chr6_1:62001728-62001747 | Msa0890090:CDS | 35.0% | |
| CATTAACTGCTGAAGGAATA+GGG | + | chr6_1:62001729-62001748 | Msa0890090:CDS | 35.0% | |
| CTGTTAGGAAGAGTGATATT+AGG | + | chr6_1:62001822-62001841 | Msa0890090:CDS | 35.0% | |
| AGTATGTATGCAACAAGCAT+GGG | + | chr6_1:62001876-62001895 | Msa0890090:CDS | 35.0% | |
| !! | GAGAGAAGAAGCATTTATCA+AGG | + | chr6_1:62001903-62001922 | Msa0890090:CDS | 35.0% |
| TGTAAATGCACAACATTGGT+TGG | - | chr6_1:62002061-62002080 | None:intergenic | 35.0% | |
| ! | TCATATAATGGGATACATGG+TGG | + | chr6_1:62002156-62002175 | Msa0890090:CDS | 35.0% |
| ! | ATGCGTGTTGTTATTAAGGA+TGG | + | chr6_1:62002247-62002266 | Msa0890090:CDS | 35.0% |
| !! | AAATGTCTATTTTGGGCAGA+TGG | + | chr6_1:62002364-62002383 | Msa0890090:CDS | 35.0% |
| AGATCAGATTATTTCCGCTT+TGG | + | chr6_1:62002394-62002413 | Msa0890090:CDS | 35.0% | |
| !! | AGTTATATTTGGTGCTGCAT+TGG | + | chr6_1:62002507-62002526 | Msa0890090:intron | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | + | chr6_1:62002567-62002586 | Msa0890090:intron | 35.0% |
| TCCCATACAATCTAGAAAAC+TGG | - | chr6_1:62002572-62002591 | None:intergenic | 35.0% | |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | + | chr6_1:62002779-62002798 | Msa0890090:CDS | 35.0% |
| !!! | TCATATGTTTTGGTAACCCA+TGG | - | chr6_1:62002837-62002856 | None:intergenic | 35.0% |
| ATACCACCAAAGAAATCATC+AGG | - | chr6_1:62002891-62002910 | None:intergenic | 35.0% | |
| !! | CTTTACGGATTTTGGTACAC+CGG | + | chr6_1:62001133-62001152 | Msa0890090:CDS | 40.0% |
| TATTCGATGATTGTTGGGAG+TGG | + | chr6_1:62001200-62001219 | Msa0890090:CDS | 40.0% | |
| ! | GATGATGATGATGTGAGTCA+TGG | + | chr6_1:62001269-62001288 | Msa0890090:CDS | 40.0% |
| GATGAGCGATATGATGAAAC+TGG | + | chr6_1:62001326-62001345 | Msa0890090:CDS | 40.0% | |
| GGAGACAATGAAAGTGATGA+TGG | + | chr6_1:62001347-62001366 | Msa0890090:CDS | 40.0% | |
| !! | GACAATGAAAGTGATGATGG+TGG | + | chr6_1:62001350-62001369 | Msa0890090:CDS | 40.0% |
| !! | GATCATAGTGCTGGTGATAA+AGG | + | chr6_1:62001383-62001402 | Msa0890090:CDS | 40.0% |
| GGTGATAAAGGTGAAGATGA+TGG | + | chr6_1:62001395-62001414 | Msa0890090:CDS | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | + | chr6_1:62001419-62001438 | Msa0890090:CDS | 40.0% | |
| GATGAAAGTGAAGGTGATGA+AGG | + | chr6_1:62001428-62001447 | Msa0890090:CDS | 40.0% | |
| GATGAAAGTGAAGGTGATGA+AGG | + | chr6_1:62001428-62001447 | Msa0890090:CDS | 40.0% | |
| GATGAAAGTGAAGGTGATGA+AGG | + | chr6_1:62001428-62001447 | Msa0890090:CDS | 40.0% | |
| GATGAAAGTGAAGGTGATGA+AGG | + | chr6_1:62001428-62001447 | Msa0890090:CDS | 40.0% | |
| GAAGGTGAATGTGATGAAGA+TGG | + | chr6_1:62001551-62001570 | Msa0890090:CDS | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | + | chr6_1:62001419-62001438 | Msa0890090:CDS | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | + | chr6_1:62001419-62001438 | Msa0890090:CDS | 40.0% | |
| ! | GAAGATGATGATGTAGGTGT+TGG | + | chr6_1:62001683-62001702 | Msa0890090:CDS | 40.0% |
| TGCTGAAGGAATAGGGAAAA+TGG | + | chr6_1:62001736-62001755 | Msa0890090:CDS | 40.0% | |
| GATATTAGGCGCAATGTTCA+CGG | + | chr6_1:62001836-62001855 | Msa0890090:CDS | 40.0% | |
| TTCACGGTGAGATTGTAATG+AGG | + | chr6_1:62001852-62001871 | Msa0890090:CDS | 40.0% | |
| CAGTATGTATGCAACAAGCA+TGG | + | chr6_1:62001875-62001894 | Msa0890090:CDS | 40.0% | |
| !! | TTTTGGGTCTGTAGTGAACA+CGG | - | chr6_1:62001985-62002004 | None:intergenic | 40.0% |
| TGTTCACTACAGACCCAAAA+AGG | + | chr6_1:62001985-62002004 | Msa0890090:CDS | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | + | chr6_1:62001986-62002005 | Msa0890090:CDS | 40.0% | |
| AGGGTGTAAATGCACAACAT+TGG | - | chr6_1:62002065-62002084 | None:intergenic | 40.0% | |
| AACCTGTGCTTTATCTACCT+CGG | - | chr6_1:62002104-62002123 | None:intergenic | 40.0% | |
| ! | GTAGATAAAGCACAGGTTGA+TGG | + | chr6_1:62002106-62002125 | Msa0890090:CDS | 40.0% |
| GAATATTCTGCCACTGATGA+CGG | + | chr6_1:62002334-62002353 | Msa0890090:CDS | 40.0% | |
| GAACAAATACCACTATCCGT+TGG | + | chr6_1:62002450-62002469 | Msa0890090:CDS | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | - | chr6_1:62002462-62002481 | None:intergenic | 40.0% | |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | + | chr6_1:62002463-62002482 | Msa0890090:intron | 40.0% |
| ! | CCATCTGTTACAACTGCTTT+TGG | - | chr6_1:62002603-62002622 | None:intergenic | 40.0% |
| CCAAAAGCAGTTGTAACAGA+TGG | + | chr6_1:62002600-62002619 | Msa0890090:CDS | 40.0% | |
| !! | AGATGGTGATGGTTCTATGA+GGG | + | chr6_1:62002617-62002636 | Msa0890090:CDS | 40.0% |
| GCATCTGAACAAGAATGCTA+TGG | + | chr6_1:62002689-62002708 | Msa0890090:CDS | 40.0% | |
| ATTGCCTTGAGAACAATCCA+TGG | + | chr6_1:62002817-62002836 | Msa0890090:CDS | 40.0% | |
| TTGCCTTGAGAACAATCCAT+GGG | + | chr6_1:62002818-62002837 | Msa0890090:CDS | 40.0% | |
| ! | TAACCCATGGATTGTTCTCA+AGG | - | chr6_1:62002824-62002843 | None:intergenic | 40.0% |
| TACCTGCCTGATGATTTCTT+TGG | + | chr6_1:62002882-62002901 | Msa0890090:CDS | 40.0% | |
| !! | AATTTTGATGAGGCGATGAG+AGG | + | chr6_1:62002996-62003015 | Msa0890090:CDS | 40.0% |
| !! | CTTTACGGATTTTGGTACAC+CGG | + | chr6_1:62001133-62001152 | Msa0890090:CDS | 40.0% |
| TATTCGATGATTGTTGGGAG+TGG | + | chr6_1:62001200-62001219 | Msa0890090:CDS | 40.0% | |
| ! | GATGATGATGATGTGAGTCA+TGG | + | chr6_1:62001269-62001288 | Msa0890090:CDS | 40.0% |
| GATGAGCGATATGATGAAAC+TGG | + | chr6_1:62001326-62001345 | Msa0890090:CDS | 40.0% | |
| GGAGACAATGAAAGTGATGA+TGG | + | chr6_1:62001347-62001366 | Msa0890090:CDS | 40.0% | |
| !! | GACAATGAAAGTGATGATGG+TGG | + | chr6_1:62001350-62001369 | Msa0890090:CDS | 40.0% |
| !! | GATCATAGTGCTGGTGATAA+AGG | + | chr6_1:62001383-62001402 | Msa0890090:CDS | 40.0% |
| GGTGATAAAGGTGAAGATGA+TGG | + | chr6_1:62001395-62001414 | Msa0890090:CDS | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | + | chr6_1:62001419-62001438 | Msa0890090:CDS | 40.0% | |
| GATGAAAGTGAAGGTGATGA+AGG | + | chr6_1:62001428-62001447 | Msa0890090:CDS | 40.0% | |
| GATGAAAGTGAAGGTGATGA+AGG | + | chr6_1:62001428-62001447 | Msa0890090:CDS | 40.0% | |
| GATGAAAGTGAAGGTGATGA+AGG | + | chr6_1:62001428-62001447 | Msa0890090:CDS | 40.0% | |
| GATGAAAGTGAAGGTGATGA+AGG | + | chr6_1:62001428-62001447 | Msa0890090:CDS | 40.0% | |
| GAAGGTGAATGTGATGAAGA+TGG | + | chr6_1:62001551-62001570 | Msa0890090:CDS | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | + | chr6_1:62001419-62001438 | Msa0890090:CDS | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | + | chr6_1:62001419-62001438 | Msa0890090:CDS | 40.0% | |
| ! | GAAGATGATGATGTAGGTGT+TGG | + | chr6_1:62001683-62001702 | Msa0890090:CDS | 40.0% |
| TGCTGAAGGAATAGGGAAAA+TGG | + | chr6_1:62001736-62001755 | Msa0890090:CDS | 40.0% | |
| GATATTAGGCGCAATGTTCA+CGG | + | chr6_1:62001836-62001855 | Msa0890090:CDS | 40.0% | |
| TTCACGGTGAGATTGTAATG+AGG | + | chr6_1:62001852-62001871 | Msa0890090:CDS | 40.0% | |
| CAGTATGTATGCAACAAGCA+TGG | + | chr6_1:62001875-62001894 | Msa0890090:CDS | 40.0% | |
| !! | TTTTGGGTCTGTAGTGAACA+CGG | - | chr6_1:62001985-62002004 | None:intergenic | 40.0% |
| TGTTCACTACAGACCCAAAA+AGG | + | chr6_1:62001985-62002004 | Msa0890090:CDS | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | + | chr6_1:62001986-62002005 | Msa0890090:CDS | 40.0% | |
| AGGGTGTAAATGCACAACAT+TGG | - | chr6_1:62002065-62002084 | None:intergenic | 40.0% | |
| AACCTGTGCTTTATCTACCT+CGG | - | chr6_1:62002104-62002123 | None:intergenic | 40.0% | |
| ! | GTAGATAAAGCACAGGTTGA+TGG | + | chr6_1:62002106-62002125 | Msa0890090:CDS | 40.0% |
| GAATATTCTGCCACTGATGA+CGG | + | chr6_1:62002334-62002353 | Msa0890090:CDS | 40.0% | |
| GAACAAATACCACTATCCGT+TGG | + | chr6_1:62002450-62002469 | Msa0890090:CDS | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | - | chr6_1:62002462-62002481 | None:intergenic | 40.0% | |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | + | chr6_1:62002463-62002482 | Msa0890090:intron | 40.0% |
| ! | CCATCTGTTACAACTGCTTT+TGG | - | chr6_1:62002603-62002622 | None:intergenic | 40.0% |
| CCAAAAGCAGTTGTAACAGA+TGG | + | chr6_1:62002600-62002619 | Msa0890090:CDS | 40.0% | |
| !! | AGATGGTGATGGTTCTATGA+GGG | + | chr6_1:62002617-62002636 | Msa0890090:CDS | 40.0% |
| GCATCTGAACAAGAATGCTA+TGG | + | chr6_1:62002689-62002708 | Msa0890090:CDS | 40.0% | |
| ATTGCCTTGAGAACAATCCA+TGG | + | chr6_1:62002817-62002836 | Msa0890090:CDS | 40.0% | |
| TTGCCTTGAGAACAATCCAT+GGG | + | chr6_1:62002818-62002837 | Msa0890090:CDS | 40.0% | |
| ! | TAACCCATGGATTGTTCTCA+AGG | - | chr6_1:62002824-62002843 | None:intergenic | 40.0% |
| TACCTGCCTGATGATTTCTT+TGG | + | chr6_1:62002882-62002901 | Msa0890090:CDS | 40.0% | |
| !! | AATTTTGATGAGGCGATGAG+AGG | + | chr6_1:62002996-62003015 | Msa0890090:CDS | 40.0% |
| !! | AGTGATGATGGTGGTTGTTC+TGG | + | chr6_1:62001359-62001378 | Msa0890090:CDS | 45.0% |
| TGTTCTGGTGATCATAGTGC+TGG | + | chr6_1:62001374-62001393 | Msa0890090:CDS | 45.0% | |
| !! | GGTGAAGATGATGGAAGTGA+AGG | + | chr6_1:62001404-62001423 | Msa0890090:CDS | 45.0% |
| GATGAAGGTGAACGTGATGA+AGG | + | chr6_1:62001443-62001462 | Msa0890090:CDS | 45.0% | |
| GGTGAACGTGATGAAAGTGA+AGG | + | chr6_1:62001464-62001483 | Msa0890090:CDS | 45.0% | |
| GGTGAACGTGATGAAAGTGA+AGG | + | chr6_1:62001464-62001483 | Msa0890090:CDS | 45.0% | |
| GGTGAACGTGATGAAAGTGA+AGG | + | chr6_1:62001464-62001483 | Msa0890090:CDS | 45.0% | |
| GGTGAATGTGATGAAGATGG+AGG | + | chr6_1:62001554-62001573 | Msa0890090:CDS | 45.0% | |
| GATGGAGGTGATGAAAGTGA+AGG | + | chr6_1:62001569-62001588 | Msa0890090:CDS | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | + | chr6_1:62001590-62001609 | Msa0890090:CDS | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | + | chr6_1:62001590-62001609 | Msa0890090:CDS | 45.0% | |
| ! | AGTGAAGGTCATGGTAGTGA+AGG | + | chr6_1:62001599-62001618 | Msa0890090:CDS | 45.0% |
| !! | TGATGATGTAGGTGTTGGTG+AGG | + | chr6_1:62001688-62001707 | Msa0890090:CDS | 45.0% |
| !! | TGTAGGTGTTGGTGAGGAAA+TGG | + | chr6_1:62001694-62001713 | Msa0890090:CDS | 45.0% |
| ! | GTGTTGGTGAGGAAATGGTA+AGG | + | chr6_1:62001699-62001718 | Msa0890090:CDS | 45.0% |
| ACTTTGTACGAGTGAGACGT+CGG | - | chr6_1:62001949-62001968 | None:intergenic | 45.0% | |
| ! | CATTGGTTGGAGTAGGTTCA+TGG | - | chr6_1:62002048-62002067 | None:intergenic | 45.0% |
| ! | TGCACAACATTGGTTGGAGT+AGG | - | chr6_1:62002055-62002074 | None:intergenic | 45.0% |
| ATCCGAGGTAGATAAAGCAC+AGG | + | chr6_1:62002099-62002118 | Msa0890090:CDS | 45.0% | |
| !! | GTTGATGGTCTTCAGTCACA+CGG | + | chr6_1:62002121-62002140 | Msa0890090:CDS | 45.0% |
| GGATACATGGTGGCTCAAAA+GGG | + | chr6_1:62002166-62002185 | Msa0890090:CDS | 45.0% | |
| TTCTTAGTGAACCCAACACC+AGG | - | chr6_1:62002199-62002218 | None:intergenic | 45.0% | |
| TTTCAAACGTCCGTCATCAG+TGG | - | chr6_1:62002347-62002366 | None:intergenic | 45.0% | |
| TTATTTCCGCTTTGGCGATG+TGG | + | chr6_1:62002402-62002421 | Msa0890090:CDS | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | - | chr6_1:62002469-62002488 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | + | chr6_1:62002513-62002532 | Msa0890090:intron | 45.0% |
| GCAGTTGTAACAGATGGTGA+TGG | + | chr6_1:62002606-62002625 | Msa0890090:CDS | 45.0% | |
| !! | CAGATGGTGATGGTTCTATG+AGG | + | chr6_1:62002616-62002635 | Msa0890090:CDS | 45.0% |
| TTCTATGAGGGAGGCGATAA+AGG | + | chr6_1:62002629-62002648 | Msa0890090:CDS | 45.0% | |
| AGCATTCTTGTTCAGATGCC+AGG | - | chr6_1:62002688-62002707 | None:intergenic | 45.0% | |
| CACCAAAGAAATCATCAGGC+AGG | - | chr6_1:62002887-62002906 | None:intergenic | 45.0% | |
| CTGCCTGATGATTTCTTTGG+TGG | + | chr6_1:62002885-62002904 | Msa0890090:CDS | 45.0% | |
| !! | AGTGATGATGGTGGTTGTTC+TGG | + | chr6_1:62001359-62001378 | Msa0890090:CDS | 45.0% |
| TGTTCTGGTGATCATAGTGC+TGG | + | chr6_1:62001374-62001393 | Msa0890090:CDS | 45.0% | |
| !! | GGTGAAGATGATGGAAGTGA+AGG | + | chr6_1:62001404-62001423 | Msa0890090:CDS | 45.0% |
| GATGAAGGTGAACGTGATGA+AGG | + | chr6_1:62001443-62001462 | Msa0890090:CDS | 45.0% | |
| GGTGAACGTGATGAAAGTGA+AGG | + | chr6_1:62001464-62001483 | Msa0890090:CDS | 45.0% | |
| GGTGAACGTGATGAAAGTGA+AGG | + | chr6_1:62001464-62001483 | Msa0890090:CDS | 45.0% | |
| GGTGAACGTGATGAAAGTGA+AGG | + | chr6_1:62001464-62001483 | Msa0890090:CDS | 45.0% | |
| GGTGAATGTGATGAAGATGG+AGG | + | chr6_1:62001554-62001573 | Msa0890090:CDS | 45.0% | |
| GATGGAGGTGATGAAAGTGA+AGG | + | chr6_1:62001569-62001588 | Msa0890090:CDS | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | + | chr6_1:62001590-62001609 | Msa0890090:CDS | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | + | chr6_1:62001590-62001609 | Msa0890090:CDS | 45.0% | |
| ! | AGTGAAGGTCATGGTAGTGA+AGG | + | chr6_1:62001599-62001618 | Msa0890090:CDS | 45.0% |
| !! | TGATGATGTAGGTGTTGGTG+AGG | + | chr6_1:62001688-62001707 | Msa0890090:CDS | 45.0% |
| !! | TGTAGGTGTTGGTGAGGAAA+TGG | + | chr6_1:62001694-62001713 | Msa0890090:CDS | 45.0% |
| ! | GTGTTGGTGAGGAAATGGTA+AGG | + | chr6_1:62001699-62001718 | Msa0890090:CDS | 45.0% |
| ACTTTGTACGAGTGAGACGT+CGG | - | chr6_1:62001949-62001968 | None:intergenic | 45.0% | |
| ! | CATTGGTTGGAGTAGGTTCA+TGG | - | chr6_1:62002048-62002067 | None:intergenic | 45.0% |
| ! | TGCACAACATTGGTTGGAGT+AGG | - | chr6_1:62002055-62002074 | None:intergenic | 45.0% |
| ATCCGAGGTAGATAAAGCAC+AGG | + | chr6_1:62002099-62002118 | Msa0890090:CDS | 45.0% | |
| !! | GTTGATGGTCTTCAGTCACA+CGG | + | chr6_1:62002121-62002140 | Msa0890090:CDS | 45.0% |
| GGATACATGGTGGCTCAAAA+GGG | + | chr6_1:62002166-62002185 | Msa0890090:CDS | 45.0% | |
| TTCTTAGTGAACCCAACACC+AGG | - | chr6_1:62002199-62002218 | None:intergenic | 45.0% | |
| TTTCAAACGTCCGTCATCAG+TGG | - | chr6_1:62002347-62002366 | None:intergenic | 45.0% | |
| TTATTTCCGCTTTGGCGATG+TGG | + | chr6_1:62002402-62002421 | Msa0890090:CDS | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | - | chr6_1:62002469-62002488 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | + | chr6_1:62002513-62002532 | Msa0890090:intron | 45.0% |
| GCAGTTGTAACAGATGGTGA+TGG | + | chr6_1:62002606-62002625 | Msa0890090:CDS | 45.0% | |
| !! | CAGATGGTGATGGTTCTATG+AGG | + | chr6_1:62002616-62002635 | Msa0890090:CDS | 45.0% |
| TTCTATGAGGGAGGCGATAA+AGG | + | chr6_1:62002629-62002648 | Msa0890090:CDS | 45.0% | |
| AGCATTCTTGTTCAGATGCC+AGG | - | chr6_1:62002688-62002707 | None:intergenic | 45.0% | |
| CACCAAAGAAATCATCAGGC+AGG | - | chr6_1:62002887-62002906 | None:intergenic | 45.0% | |
| CTGCCTGATGATTTCTTTGG+TGG | + | chr6_1:62002885-62002904 | Msa0890090:CDS | 45.0% | |
| GTAGAACCGTAGTCGTGTTC+CGG | - | chr6_1:62001155-62001174 | None:intergenic | 50.0% | |
| GGAACACGACTACGGTTCTA+CGG | + | chr6_1:62001154-62001173 | Msa0890090:CDS | 50.0% | |
| TCGATGATTGTTGGGAGTGG+TGG | + | chr6_1:62001203-62001222 | Msa0890090:CDS | 50.0% | |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | + | chr6_1:62001957-62001976 | Msa0890090:CDS | 50.0% |
| GGGATACATGGTGGCTCAAA+AGG | + | chr6_1:62002165-62002184 | Msa0890090:CDS | 50.0% | |
| TACATGGTGGCTCAAAAGGG+TGG | + | chr6_1:62002169-62002188 | Msa0890090:CDS | 50.0% | |
| GCTCAAAAGGGTGGATATCC+TGG | + | chr6_1:62002178-62002197 | Msa0890090:CDS | 50.0% | |
| AAGGGTGGATATCCTGGTGT+TGG | + | chr6_1:62002184-62002203 | Msa0890090:CDS | 50.0% | |
| AGGGTGGATATCCTGGTGTT+GGG | + | chr6_1:62002185-62002204 | Msa0890090:CDS | 50.0% | |
| ATGCAACCACATCGCCAAAG+CGG | - | chr6_1:62002411-62002430 | None:intergenic | 50.0% | |
| !! | TGGTGATGGTTCTATGAGGG+AGG | + | chr6_1:62002620-62002639 | Msa0890090:CDS | 50.0% |
| TATGAGGGAGGCGATAAAGG+CGG | + | chr6_1:62002632-62002651 | Msa0890090:CDS | 50.0% | |
| TCAGATGCCAGGCACATAGA+CGG | - | chr6_1:62002677-62002696 | None:intergenic | 50.0% | |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | + | chr6_1:62002785-62002804 | Msa0890090:CDS | 50.0% |
| CAGATGAGTTGTCAGCACTG+GGG | - | chr6_1:62003070-62003089 | None:intergenic | 50.0% | |
| GCAGATGAGTTGTCAGCACT+GGG | - | chr6_1:62003071-62003090 | None:intergenic | 50.0% | |
| GTAGAACCGTAGTCGTGTTC+CGG | - | chr6_1:62001155-62001174 | None:intergenic | 50.0% | |
| GGAACACGACTACGGTTCTA+CGG | + | chr6_1:62001154-62001173 | Msa0890090:CDS | 50.0% | |
| TCGATGATTGTTGGGAGTGG+TGG | + | chr6_1:62001203-62001222 | Msa0890090:CDS | 50.0% | |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | + | chr6_1:62001957-62001976 | Msa0890090:CDS | 50.0% |
| GGGATACATGGTGGCTCAAA+AGG | + | chr6_1:62002165-62002184 | Msa0890090:CDS | 50.0% | |
| TACATGGTGGCTCAAAAGGG+TGG | + | chr6_1:62002169-62002188 | Msa0890090:CDS | 50.0% | |
| GCTCAAAAGGGTGGATATCC+TGG | + | chr6_1:62002178-62002197 | Msa0890090:CDS | 50.0% | |
| AAGGGTGGATATCCTGGTGT+TGG | + | chr6_1:62002184-62002203 | Msa0890090:CDS | 50.0% | |
| AGGGTGGATATCCTGGTGTT+GGG | + | chr6_1:62002185-62002204 | Msa0890090:CDS | 50.0% | |
| ATGCAACCACATCGCCAAAG+CGG | - | chr6_1:62002411-62002430 | None:intergenic | 50.0% | |
| !! | TGGTGATGGTTCTATGAGGG+AGG | + | chr6_1:62002620-62002639 | Msa0890090:CDS | 50.0% |
| TATGAGGGAGGCGATAAAGG+CGG | + | chr6_1:62002632-62002651 | Msa0890090:CDS | 50.0% | |
| TCAGATGCCAGGCACATAGA+CGG | - | chr6_1:62002677-62002696 | None:intergenic | 50.0% | |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | + | chr6_1:62002785-62002804 | Msa0890090:CDS | 50.0% |
| CAGATGAGTTGTCAGCACTG+GGG | - | chr6_1:62003070-62003089 | None:intergenic | 50.0% | |
| GCAGATGAGTTGTCAGCACT+GGG | - | chr6_1:62003071-62003090 | None:intergenic | 50.0% | |
| GGTACACCGGAACACGACTA+CGG | + | chr6_1:62001146-62001165 | Msa0890090:CDS | 55.0% | |
| ACACGACTACGGTTCTACGG+AGG | + | chr6_1:62001157-62001176 | Msa0890090:CDS | 55.0% | |
| TAGTGAACACGGAGCCTAGC+TGG | - | chr6_1:62001974-62001993 | None:intergenic | 55.0% | |
| CATAGACGGTGACGCGTACT+TGG | - | chr6_1:62002663-62002682 | None:intergenic | 55.0% | |
| !!! | AGTTTTGGGGGGACTTGGTG+AGG | + | chr6_1:62002790-62002809 | Msa0890090:CDS | 55.0% |
| !!! | GTTTTGGGGGGACTTGGTGA+GGG | + | chr6_1:62002791-62002810 | Msa0890090:CDS | 55.0% |
| ! | CAGCACTGGGGATGAAAACC+TGG | - | chr6_1:62003058-62003077 | None:intergenic | 55.0% |
| CGCAGATGAGTTGTCAGCAC+TGG | - | chr6_1:62003072-62003091 | None:intergenic | 55.0% | |
| GGTACACCGGAACACGACTA+CGG | + | chr6_1:62001146-62001165 | Msa0890090:CDS | 55.0% | |
| ACACGACTACGGTTCTACGG+AGG | + | chr6_1:62001157-62001176 | Msa0890090:CDS | 55.0% | |
| TAGTGAACACGGAGCCTAGC+TGG | - | chr6_1:62001974-62001993 | None:intergenic | 55.0% | |
| CATAGACGGTGACGCGTACT+TGG | - | chr6_1:62002663-62002682 | None:intergenic | 55.0% | |
| !!! | AGTTTTGGGGGGACTTGGTG+AGG | + | chr6_1:62002790-62002809 | Msa0890090:CDS | 55.0% |
| !!! | GTTTTGGGGGGACTTGGTGA+GGG | + | chr6_1:62002791-62002810 | Msa0890090:CDS | 55.0% |
| ! | CAGCACTGGGGATGAAAACC+TGG | - | chr6_1:62003058-62003077 | None:intergenic | 55.0% |
| CGCAGATGAGTTGTCAGCAC+TGG | - | chr6_1:62003072-62003091 | None:intergenic | 55.0% | |
| CGACTACGGTTCTACGGAGG+TGG | + | chr6_1:62001160-62001179 | Msa0890090:CDS | 60.0% | |
| CGACTACGGTTCTACGGAGG+TGG | + | chr6_1:62001160-62001179 | Msa0890090:CDS | 60.0% | |
| CGCGTCACCGTCTATGTGCC+TGG | + | chr6_1:62002667-62002686 | Msa0890090:CDS | 65.0% | |
| CGCGTCACCGTCTATGTGCC+TGG | + | chr6_1:62002667-62002686 | Msa0890090:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 62001113 | 62003100 | 62001113 | ID=Msa0890090;Name=Msa0890090 |
| chr6_1 | mRNA | 62001113 | 62003100 | 62001113 | ID=Msa0890090-mRNA-1;Parent=Msa0890090;Name=Msa0890090-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|0.5|1|1|2|0|628 |
| chr6_1 | exon | 62001113 | 62002471 | 62001113 | ID=Msa0890090-mRNA-1:exon:11435;Parent=Msa0890090-mRNA-1 |
| chr6_1 | exon | 62002573 | 62003100 | 62002573 | ID=Msa0890090-mRNA-1:exon:11436;Parent=Msa0890090-mRNA-1 |
| chr6_1 | CDS | 62001113 | 62002471 | 62001113 | ID=Msa0890090-mRNA-1:cds;Parent=Msa0890090-mRNA-1 |
| chr6_1 | CDS | 62002573 | 62003100 | 62002573 | ID=Msa0890090-mRNA-1:cds;Parent=Msa0890090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
