AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0890600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0890600 MtrunA17_Chr6g0471041 58.516 364 62 7 1 351 130 417 3.21e-127 371
Msa0890600 MtrunA17_Chr4g0009901 43.182 88 36 2 1 77 124 208 5.15e-13 68.6
Msa0890600 MtrunA17_Chr4g0009851 29.832 238 91 8 1 224 125 300 8.47e-13 68.2
Msa0890600 MtrunA17_Chr4g0009991 44.118 68 32 1 9 76 45 106 9.73e-13 64.7
Msa0890600 MtrunA17_Chr1g0161431 34.783 115 37 2 1 77 126 240 6.39e-12 66.6
Msa0890600 MtrunA17_Chr6g0472401 44.286 70 39 0 76 145 813 882 2.93e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 48 sgRNAs with CRISPR-Local

Find 598 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACATTGTATGACTGAATT+AGG 0.191696 6_1:-63562129 None:intergenic
CTAAGGGCTGTGAATCAATT+TGG 0.229550 6_1:+63555537 Msa0890600:CDS
CTTCCAGATTTGTGCTTTCT+CGG 0.268084 6_1:-63560413 None:intergenic
CAATGCATCAAGAATTTCTA+AGG 0.275756 6_1:+63555520 Msa0890600:CDS
TCCACAATATTCATCAAAAT+TGG 0.288311 6_1:+63561897 Msa0890600:CDS
CTTATCTGCGTACATCTTCA+TGG 0.323616 6_1:-63560511 None:intergenic
TTGAATGAAAATAAACATAA+TGG 0.371742 6_1:+63555414 Msa0890600:CDS
CATCCGAGAAAGCACAAATC+TGG 0.382173 6_1:+63560410 Msa0890600:CDS
CTTCCTACTGAAACACAATT+AGG 0.403491 6_1:+63561769 Msa0890600:CDS
ATTCAAGTGATGAATGTTCC+TGG 0.409770 6_1:+63555683 Msa0890600:CDS
TGCTTTCTCGGATGTATTGA+GGG 0.420267 6_1:-63560401 None:intergenic
TCAGTCTAGTGTTCTAAATT+CGG 0.444267 6_1:+63562206 Msa0890600:CDS
GTGCTTTCTCGGATGTATTG+AGG 0.464711 6_1:-63560402 None:intergenic
TCTCCTGGCACAAAAGTATG+AGG 0.465403 6_1:-63560543 None:intergenic
TTGCTTGAGACCATGTTAAA+CGG 0.467130 6_1:-63555500 None:intergenic
TTTCCATAAACCGCTTCAAA+AGG 0.468826 6_1:-63560363 None:intergenic
GGCAAAGAATCTTACTATCA+AGG 0.473824 6_1:-63555560 None:intergenic
AGTACTGATGTTGTGGTGCA+TGG 0.500261 6_1:-63561821 None:intergenic
TTCACAAACACAAGATCTCC+TGG 0.516255 6_1:-63560558 None:intergenic
ATGTATTGAGGGAGGGATGG+AGG 0.525989 6_1:-63560390 None:intergenic
CGGATGTATTGAGGGAGGGA+TGG 0.535451 6_1:-63560393 None:intergenic
GAATAAGCTCAAGAAAGCTC+AGG 0.542608 6_1:+63560485 Msa0890600:CDS
TTCTCGGATGTATTGAGGGA+GGG 0.549765 6_1:-63560397 None:intergenic
CTCATCACCTGGATTCATGT+TGG 0.553676 6_1:-63562301 None:intergenic
AGACCTAATTGTGTTTCAGT+AGG 0.555876 6_1:-63561772 None:intergenic
CAATTAAAGAACTCATCACC+TGG 0.565714 6_1:-63562312 None:intergenic
GATCAGTCCAACATGAATCC+AGG 0.574425 6_1:+63562294 Msa0890600:CDS
TAGGTGAATGTTGTGGTGCA+TGG 0.581870 6_1:-63561981 None:intergenic
ACATGTGCAAACATGTTCCA+AGG 0.586197 6_1:+63555385 None:intergenic
AGAAAGCACAAATCTGGAAG+CGG 0.599983 6_1:+63560416 Msa0890600:CDS
ACGAATGTCGTTGAATGTTG+TGG 0.605866 6_1:-63562258 None:intergenic
GTAAAGATGTTGGCAAATGT+CGG 0.606699 6_1:-63562090 None:intergenic
GTAAAGATGTTGGCAAATGT+CGG 0.606699 6_1:-63562180 None:intergenic
GCAAATGTCGGTGAATGTTG+TGG 0.612657 6_1:-63562078 None:intergenic
AAGCACAAATCTGGAAGCGG+TGG 0.614596 6_1:+63560419 Msa0890600:CDS
AGACTGAGCAGTAAAGATGT+TGG 0.615246 6_1:-63562100 None:intergenic
AGACTGAGCAGTAAAGATGT+TGG 0.615246 6_1:-63562190 None:intergenic
ACTGATGAGTACTGATGTTG+TGG 0.616080 6_1:-63561828 None:intergenic
ATGAAATGCCGAAAGGTGAG+AGG 0.619452 6_1:+63561719 Msa0890600:CDS
AATGCATCAAGAATTTCTAA+GGG 0.619626 6_1:+63555521 Msa0890600:CDS
GTACTGATGTTGTGGTGCAT+GGG 0.622445 6_1:-63561820 None:intergenic
GCAAATGTCGGTGAATGTTG+TGG 0.629584 6_1:-63562168 None:intergenic
TTTCTCGGATGTATTGAGGG+AGG 0.629698 6_1:-63560398 None:intergenic
TTAAAGAATGAAATGCCGAA+AGG 0.636640 6_1:+63561712 Msa0890600:intron
AGAAGAAACTAATGTTGATG+TGG 0.637171 6_1:+63555440 Msa0890600:CDS
CTCCTGGCACAAAAGTATGA+GGG 0.637854 6_1:-63560542 None:intergenic
ACTTTGTTAGAATTTCATCA+CGG 0.642392 6_1:-63560458 None:intergenic
GTAAATGTAGGTGAATGTTG+TGG 0.683578 6_1:-63561988 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAAAAAAAAAAATAAGAA+TGG + chr6_1:63556064-63556083 Msa0890600:intron 10.0%
!!! AATATTTTTTTTTTTTTTGC+GGG + chr6_1:63561499-63561518 Msa0890600:intron 10.0%
!! TTGAATGAAAATAAACATAA+TGG + chr6_1:63555414-63555433 Msa0890600:CDS 15.0%
!! AAAGAAAGAAAAAAAAAAAG+TGG - chr6_1:63555584-63555603 None:intergenic 15.0%
!!! ATCACTTGAATAATTTTTTT+TGG - chr6_1:63555674-63555693 None:intergenic 15.0%
!!! ATTGAAAATTTGATAGATTT+TGG + chr6_1:63555827-63555846 Msa0890600:intron 15.0%
!!! TTGAAAATTTGATAGATTTT+GGG + chr6_1:63555828-63555847 Msa0890600:intron 15.0%
!! AAAAAAAAAAATAAGAATGG+TGG + chr6_1:63556067-63556086 Msa0890600:intron 15.0%
!! AATCTAAGAAATCATAATAA+AGG - chr6_1:63561461-63561480 None:intergenic 15.0%
!!! GTTTGTTTTTTAGATTAACT+TGG + chr6_1:63555740-63555759 Msa0890600:intron 20.0%
!!! TACTGATTAGTTTTCTTTTT+AGG - chr6_1:63556122-63556141 None:intergenic 20.0%
!! TAAAAAACTATAACGTATCA+TGG + chr6_1:63556159-63556178 Msa0890600:intron 20.0%
!! AAAAAACTATAACGTATCAT+GGG + chr6_1:63556160-63556179 Msa0890600:intron 20.0%
!! AAAACATAAAGATAGACATT+GGG - chr6_1:63556344-63556363 None:intergenic 20.0%
!! CATTGAATACTACATAAATA+GGG - chr6_1:63556480-63556499 None:intergenic 20.0%
!! TCATTGAATACTACATAAAT+AGG - chr6_1:63556481-63556500 None:intergenic 20.0%
!! ATTTATGTAGTATTCAATGA+AGG + chr6_1:63556481-63556500 Msa0890600:intron 20.0%
!! TTTATGTAGTATTCAATGAA+GGG + chr6_1:63556482-63556501 Msa0890600:intron 20.0%
!!! TATAACATAGATTTTGTTCA+CGG - chr6_1:63557464-63557483 None:intergenic 20.0%
!! TAAAGCATGTAAACTTATTT+GGG - chr6_1:63557649-63557668 None:intergenic 20.0%
!! TTAAAGCATGTAAACTTATT+TGG - chr6_1:63557650-63557669 None:intergenic 20.0%
!! AATAAGTTTACATGCTTTAA+TGG + chr6_1:63557650-63557669 Msa0890600:intron 20.0%
!! ATAAGTTTACATGCTTTAAT+GGG + chr6_1:63557651-63557670 Msa0890600:intron 20.0%
!! ATGAAATATATGGTACAAAT+TGG + chr6_1:63558527-63558546 Msa0890600:intron 20.0%
!! AAAACATAAAGATAGACATT+GGG - chr6_1:63556344-63556363 None:intergenic 20.0%
!! CATTGAATACTACATAAATA+GGG - chr6_1:63556480-63556499 None:intergenic 20.0%
!! TCATTGAATACTACATAAAT+AGG - chr6_1:63556481-63556500 None:intergenic 20.0%
!! ATTTATGTAGTATTCAATGA+AGG + chr6_1:63556481-63556500 Msa0890600:intron 20.0%
!! TTTATGTAGTATTCAATGAA+GGG + chr6_1:63556482-63556501 Msa0890600:intron 20.0%
!! TAAATTAACTCATTCTGTAA+GGG - chr6_1:63561371-63561390 None:intergenic 20.0%
!! ATAAATTAACTCATTCTGTA+AGG - chr6_1:63561372-63561391 None:intergenic 20.0%
!!! AATTAAAACTTACTTTGAAG+AGG + chr6_1:63561671-63561690 Msa0890600:intron 20.0%
!! TTTTCATTCAAAACTTTCCT+TGG - chr6_1:63555405-63555424 None:intergenic 25.0%
!!! TTAAACGGTTCTTTTTTGTT+GGG - chr6_1:63555488-63555507 None:intergenic 25.0%
! AATGCATCAAGAATTTCTAA+GGG + chr6_1:63555521-63555540 Msa0890600:CDS 25.0%
! CTAAAAAACAAACCTGTAAA+TGG - chr6_1:63555733-63555752 None:intergenic 25.0%
! TGAATGTATGTTATTAGCAA+AGG + chr6_1:63555951-63555970 Msa0890600:intron 25.0%
! CATGATTTACTTGATTACTA+AGG + chr6_1:63556019-63556038 Msa0890600:intron 25.0%
! TGATAATCATTCAAGTGTTT+GGG - chr6_1:63556252-63556271 None:intergenic 25.0%
! ATGATAATCATTCAAGTGTT+TGG - chr6_1:63556253-63556272 None:intergenic 25.0%
! AAACACTTGAATGATTATCA+TGG + chr6_1:63556252-63556271 Msa0890600:intron 25.0%
! CAAAACATAAAGATAGACAT+TGG - chr6_1:63556345-63556364 None:intergenic 25.0%
! AGTACTAAGATAAGATAAGA+TGG - chr6_1:63556406-63556425 None:intergenic 25.0%
! AAAAGAGTTTGTGGAAATAA+AGG - chr6_1:63556577-63556596 None:intergenic 25.0%
!!! TTTGTTGATTTTGAAGGATT+TGG - chr6_1:63556680-63556699 None:intergenic 25.0%
!!! CAAAACTTTGTTGATTTTGA+AGG - chr6_1:63556686-63556705 None:intergenic 25.0%
!!! ATTTTGAAAATCCAACCTAA+GGG - chr6_1:63556875-63556894 None:intergenic 25.0%
!!! TACTTGAGCTATTTCATTTT+AGG + chr6_1:63557181-63557200 Msa0890600:intron 25.0%
! TAAGTAATTGTTGAATAGCT+GGG - chr6_1:63558183-63558202 None:intergenic 25.0%
!!! ACTAGTTTTTCAATGTATGA+TGG + chr6_1:63558806-63558825 Msa0890600:intron 25.0%
! ATGAAATACTCCTCAAAATT+GGG - chr6_1:63559163-63559182 None:intergenic 25.0%
! TTCTAACTAAAAAACGCAAT+TGG - chr6_1:63559244-63559263 None:intergenic 25.0%
!! TTGAAGAATTGAGCAATTTT+GGG - chr6_1:63559273-63559292 None:intergenic 25.0%
! TCAATTCTTCAACATATGTA+CGG + chr6_1:63559281-63559300 Msa0890600:intron 25.0%
! GTTTATACACAATATCATAG+TGG - chr6_1:63559452-63559471 None:intergenic 25.0%
! TATGATATTGTGTATAAACC+AGG + chr6_1:63559453-63559472 Msa0890600:intron 25.0%
! ACTTTGTTAGAATTTCATCA+CGG - chr6_1:63560461-63560480 None:intergenic 25.0%
! TTCAAAAGCAACATCATTTA+TGG - chr6_1:63560673-63560692 None:intergenic 25.0%
! TGATAATCATTCAAGTGTTT+GGG - chr6_1:63556252-63556271 None:intergenic 25.0%
! ATGATAATCATTCAAGTGTT+TGG - chr6_1:63556253-63556272 None:intergenic 25.0%
! CAAAACATAAAGATAGACAT+TGG - chr6_1:63556345-63556364 None:intergenic 25.0%
! AGTACTAAGATAAGATAAGA+TGG - chr6_1:63556406-63556425 None:intergenic 25.0%
! AAAAGAGTTTGTGGAAATAA+AGG - chr6_1:63556577-63556596 None:intergenic 25.0%
! TATATGAGAATGATAAAGAG+AGG + chr6_1:63561394-63561413 Msa0890600:intron 25.0%
! AAGAAATCATAATAAAGGTC+AGG - chr6_1:63561456-63561475 None:intergenic 25.0%
! TCCACAATATTCATCAAAAT+TGG + chr6_1:63561897-63561916 Msa0890600:CDS 25.0%
! AGACTTATCAGTAAAAATGT+TGG - chr6_1:63561923-63561942 None:intergenic 25.0%
!! GTAAAAATGTTGGTAAATGT+AGG - chr6_1:63562003-63562022 None:intergenic 25.0%
AGAAGAAACTAATGTTGATG+TGG + chr6_1:63555440-63555459 Msa0890600:CDS 30.0%
!!! TAAACGGTTCTTTTTTGTTG+GGG - chr6_1:63555487-63555506 None:intergenic 30.0%
!!! GTTAAACGGTTCTTTTTTGT+TGG - chr6_1:63555489-63555508 None:intergenic 30.0%
CAAAAAAGAACCGTTTAACA+TGG + chr6_1:63555490-63555509 Msa0890600:CDS 30.0%
CAATGCATCAAGAATTTCTA+AGG + chr6_1:63555520-63555539 Msa0890600:CDS 30.0%
! GCTTTGCATCTGAAATATAA+GGG - chr6_1:63555652-63555671 None:intergenic 30.0%
AAGATAGACATTGGGAATAT+AGG - chr6_1:63556336-63556355 None:intergenic 30.0%
! TATGTTTTGTCTTTGTCTAG+AGG + chr6_1:63556356-63556375 Msa0890600:intron 30.0%
GGTGACTCATTATAATCTAA+CGG - chr6_1:63556385-63556404 None:intergenic 30.0%
AAGGAAACAAAAAGAGTTTG+TGG - chr6_1:63556586-63556605 None:intergenic 30.0%
! ATCCAACAATGATGATGTTA+CGG + chr6_1:63556644-63556663 Msa0890600:intron 30.0%
!! GATTTTGAAAATCCAACCTA+AGG - chr6_1:63556876-63556895 None:intergenic 30.0%
!!! AATTGTTTTGGTATGTTGGT+GGG - chr6_1:63557402-63557421 None:intergenic 30.0%
!!! AAATTGTTTTGGTATGTTGG+TGG - chr6_1:63557403-63557422 None:intergenic 30.0%
!!! AGGAAATTGTTTTGGTATGT+TGG - chr6_1:63557406-63557425 None:intergenic 30.0%
! CGTTTGATAGGAAATTGTTT+TGG - chr6_1:63557414-63557433 None:intergenic 30.0%
! TGTGATGAAAAGTATGTTGT+TGG + chr6_1:63557486-63557505 Msa0890600:intron 30.0%
CAAGATTGAATAGAACTTGT+GGG - chr6_1:63557874-63557893 None:intergenic 30.0%
TCAAGATTGAATAGAACTTG+TGG - chr6_1:63557875-63557894 None:intergenic 30.0%
ATTGTATTACCTGATTACCT+CGG - chr6_1:63558027-63558046 None:intergenic 30.0%
! TTTTGTGATTCAATTGGGTT+TGG - chr6_1:63558157-63558176 None:intergenic 30.0%
! GGGAATTTTGTGATTCAATT+GGG - chr6_1:63558162-63558181 None:intergenic 30.0%
AAGTAATTGTTGAATAGCTG+GGG - chr6_1:63558182-63558201 None:intergenic 30.0%
GTAAGTAATTGTTGAATAGC+TGG - chr6_1:63558184-63558203 None:intergenic 30.0%
!! TAAAATTGTGGGTATCGATA+TGG - chr6_1:63558310-63558329 None:intergenic 30.0%
!! TCTCTTGCTTCTAAAATTGT+GGG - chr6_1:63558321-63558340 None:intergenic 30.0%
!! ATCTCTTGCTTCTAAAATTG+TGG - chr6_1:63558322-63558341 None:intergenic 30.0%
GAGCTTCTTGATGAAATATA+TGG + chr6_1:63558517-63558536 Msa0890600:intron 30.0%
TCAACAGTCTATTGAGTATT+TGG + chr6_1:63558871-63558890 Msa0890600:intron 30.0%
CAACAGTCTATTGAGTATTT+GGG + chr6_1:63558872-63558891 Msa0890600:intron 30.0%
TGTAATCCTTAACGAACTTA+CGG - chr6_1:63559018-63559037 None:intergenic 30.0%
! TTAAGAAAGACGCATTTTAG+TGG + chr6_1:63559068-63559087 Msa0890600:intron 30.0%
GATGAAATACTCCTCAAAAT+TGG - chr6_1:63559164-63559183 None:intergenic 30.0%
! GTTGAAGAATTGAGCAATTT+TGG - chr6_1:63559274-63559293 None:intergenic 30.0%
CAATTCTTCAACATATGTAC+GGG + chr6_1:63559282-63559301 Msa0890600:intron 30.0%
TTACTGCTGCTGTTAAAAAA+TGG + chr6_1:63559317-63559336 Msa0890600:intron 30.0%
AAAATGGAGAACTTATTTGC+TGG + chr6_1:63559333-63559352 Msa0890600:intron 30.0%
TATTACTTGGCAAAATTGCT+TGG + chr6_1:63559423-63559442 Msa0890600:intron 30.0%
ATATTGTGTATAAACCAGGT+GGG + chr6_1:63559457-63559476 Msa0890600:intron 30.0%
! GGATTAATTTGATCATCTCA+GGG - chr6_1:63559593-63559612 None:intergenic 30.0%
! TGGATTAATTTGATCATCTC+AGG - chr6_1:63559594-63559613 None:intergenic 30.0%
! ATTAATCCAAGAAGTACAAC+TGG + chr6_1:63559605-63559624 Msa0890600:intron 30.0%
TCTCAAAGAGAATGTGTATT+GGG + chr6_1:63559783-63559802 Msa0890600:intron 30.0%
TTAAAAAGCTCTTGCCAAAA+GGG - chr6_1:63560150-63560169 None:intergenic 30.0%
TTTAAAAAGCTCTTGCCAAA+AGG - chr6_1:63560151-63560170 None:intergenic 30.0%
! CAAGAGCTTTTTAAACTAAG+TGG + chr6_1:63560156-63560175 Msa0890600:intron 30.0%
!! CAAAGTCTTATTGACAATCT+CGG - chr6_1:63560232-63560251 None:intergenic 30.0%
TCCATGATCAACCAAAAAAA+TGG + chr6_1:63560274-63560293 Msa0890600:intron 30.0%
CCATGATCAACCAAAAAAAT+GGG + chr6_1:63560275-63560294 Msa0890600:intron 30.0%
CATGATCAACCAAAAAAATG+GGG + chr6_1:63560276-63560295 Msa0890600:intron 30.0%
!!! AAGAATTTGCCCCATTTTTT+TGG - chr6_1:63560288-63560307 None:intergenic 30.0%
!!! AAATGATGTTGCTTTTGAAG+TGG + chr6_1:63560674-63560693 Msa0890600:intron 30.0%
GGTGACTCATTATAATCTAA+CGG - chr6_1:63556385-63556404 None:intergenic 30.0%
AAGGAAACAAAAAGAGTTTG+TGG - chr6_1:63556586-63556605 None:intergenic 30.0%
TTAAAGAATGAAATGCCGAA+AGG + chr6_1:63561712-63561731 Msa0890600:intron 30.0%
!! GCCAATTTTGATGAATATTG+TGG - chr6_1:63561901-63561920 None:intergenic 30.0%
AGACTGAGTAGTAAAAATGT+TGG - chr6_1:63562013-63562032 None:intergenic 30.0%
TCACATTGTATGACTGAATT+AGG - chr6_1:63562132-63562151 None:intergenic 30.0%
! TCAGTCTAGTGTTCTAAATT+CGG + chr6_1:63562206-63562225 Msa0890600:CDS 30.0%
!!! AAACGGTTCTTTTTTGTTGG+GGG - chr6_1:63555486-63555505 None:intergenic 35.0%
TTGCTTGAGACCATGTTAAA+CGG - chr6_1:63555503-63555522 None:intergenic 35.0%
GGCAAAGAATCTTACTATCA+AGG - chr6_1:63555563-63555582 None:intergenic 35.0%
! TGCATCTGAAATATAAGGGA+GGG - chr6_1:63555648-63555667 None:intergenic 35.0%
! TTGCATCTGAAATATAAGGG+AGG - chr6_1:63555649-63555668 None:intergenic 35.0%
! GGCTTTGCATCTGAAATATA+AGG - chr6_1:63555653-63555672 None:intergenic 35.0%
ATTCAAGTGATGAATGTTCC+TGG + chr6_1:63555683-63555702 Msa0890600:CDS 35.0%
ATATTCTCTCTTGTCAAACC+AGG - chr6_1:63555704-63555723 None:intergenic 35.0%
GAATATTGCTAGCCATTTAC+AGG + chr6_1:63555718-63555737 Msa0890600:intron 35.0%
GTGGCTCATATATTGATACT+TGG + chr6_1:63556086-63556105 Msa0890600:intron 35.0%
GCTCATATATTGATACTTGG+TGG + chr6_1:63556089-63556108 Msa0890600:intron 35.0%
TTGAACCAGAAGAGGATATT+AGG + chr6_1:63556205-63556224 Msa0890600:intron 35.0%
!! TGCTTTTTAACAGCCAACTT+GGG - chr6_1:63556278-63556297 None:intergenic 35.0%
GTAGTATTCAATGAAGGGAA+TGG + chr6_1:63556487-63556506 Msa0890600:intron 35.0%
AACATCATCATTGTTGGATG+AGG - chr6_1:63556643-63556662 None:intergenic 35.0%
TGAGTTTCATAACATACCAG+AGG + chr6_1:63556907-63556926 Msa0890600:intron 35.0%
ATCTGTCAAAGAATACCAGA+CGG + chr6_1:63557111-63557130 Msa0890600:intron 35.0%
! TTTCATTTTAGGCTTGAAGC+CGG + chr6_1:63557192-63557211 Msa0890600:intron 35.0%
AATCAGTTTGGCAAAGTTAC+AGG + chr6_1:63557263-63557282 Msa0890600:intron 35.0%
ATTACCTGGCTTAGTGTAAA+AGG - chr6_1:63557316-63557335 None:intergenic 35.0%
GTGAAGTGATTTGAATTACC+TGG - chr6_1:63557330-63557349 None:intergenic 35.0%
! AACATAGATTTTGTTCACGG+CGG - chr6_1:63557461-63557480 None:intergenic 35.0%
AGTAATAAGGTTGTTGGATC+TGG - chr6_1:63557576-63557595 None:intergenic 35.0%
! GCACACACACAATTTTATTC+AGG + chr6_1:63557751-63557770 Msa0890600:intron 35.0%
TAAATCCACAAGGAACTCAT+GGG - chr6_1:63557900-63557919 None:intergenic 35.0%
ATAAATCCACAAGGAACTCA+TGG - chr6_1:63557901-63557920 None:intergenic 35.0%
GAAGCACAAATAAATCCACA+AGG - chr6_1:63557910-63557929 None:intergenic 35.0%
TTATTTGTGCTTCCTCTTAG+CGG + chr6_1:63557917-63557936 Msa0890600:intron 35.0%
! CAGGTAATACAATTTTCTGC+TGG + chr6_1:63558034-63558053 Msa0890600:intron 35.0%
! GGGGAATTTTGTGATTCAAT+TGG - chr6_1:63558163-63558182 None:intergenic 35.0%
AGTGGTAAGTTCGGAAAAAA+TGG - chr6_1:63558218-63558237 None:intergenic 35.0%
! GGTTTGATCCTTCTAAAAGT+GGG - chr6_1:63558273-63558292 None:intergenic 35.0%
!! GAAGAAAAAGCACTAGAACT+GGG - chr6_1:63558388-63558407 None:intergenic 35.0%
TTCATCAAGAAGCTCATCAA+TGG - chr6_1:63558512-63558531 None:intergenic 35.0%
TTGGATTCATGTGAATCTGA+TGG - chr6_1:63558582-63558601 None:intergenic 35.0%
! GCAGTCTTATGAATATCACT+TGG - chr6_1:63558601-63558620 None:intergenic 35.0%
AGTTTAGATTCATGGACGAT+TGG - chr6_1:63558696-63558715 None:intergenic 35.0%
CGACTCAAAGTTTAGATTCA+TGG - chr6_1:63558704-63558723 None:intergenic 35.0%
GAAACAGTCTAAATGCATCT+TGG + chr6_1:63558847-63558866 Msa0890600:intron 35.0%
! TTGTGTCATCGCTGAAATTT+TGG - chr6_1:63558936-63558955 None:intergenic 35.0%
AAATTTCAGCGATGACACAA+TGG + chr6_1:63558936-63558955 Msa0890600:intron 35.0%
AAAGATTGCTCAACCTCTAA+CGG + chr6_1:63559039-63559058 Msa0890600:intron 35.0%
TTCTTAAGTAGTTCCGTTAG+AGG - chr6_1:63559055-63559074 None:intergenic 35.0%
! AGCTTTTAACAAGCTCAAAG+AGG + chr6_1:63559108-63559127 Msa0890600:intron 35.0%
GATATTGTGTATAAACCAGG+TGG + chr6_1:63559456-63559475 Msa0890600:intron 35.0%
GTCTCAAAGAGAATGTGTAT+TGG + chr6_1:63559782-63559801 Msa0890600:intron 35.0%
AAAGAGAATGTGTATTGGGT+AGG + chr6_1:63559787-63559806 Msa0890600:intron 35.0%
TATCTTCCCAAACTGTAGTT+GGG - chr6_1:63559915-63559934 None:intergenic 35.0%
ATATCTTCCCAAACTGTAGT+TGG - chr6_1:63559916-63559935 None:intergenic 35.0%
ATTTCCTTAGACTTCATCGT+TGG + chr6_1:63559934-63559953 Msa0890600:intron 35.0%
TTTCCTTAGACTTCATCGTT+GGG + chr6_1:63559935-63559954 Msa0890600:intron 35.0%
TTGCAAGCTGTAAAGTTTGT+AGG - chr6_1:63560039-63560058 None:intergenic 35.0%
AAACTTTACAGCTTGCAAAG+TGG + chr6_1:63560041-63560060 Msa0890600:intron 35.0%
AACTAAGTGGTACCAAGTTA+AGG + chr6_1:63560169-63560188 Msa0890600:intron 35.0%
!!! CCCATTTTTTTGGTTGATCA+TGG - chr6_1:63560278-63560297 None:intergenic 35.0%
AATGGGGCAAATTCTTACAT+TGG + chr6_1:63560292-63560311 Msa0890600:intron 35.0%
ATGGGGCAAATTCTTACATT+GGG + chr6_1:63560293-63560312 Msa0890600:intron 35.0%
AATTCTTACATTGGGCTGAA+TGG + chr6_1:63560301-63560320 Msa0890600:intron 35.0%
TTTCCATAAACCGCTTCAAA+AGG - chr6_1:63560366-63560385 None:intergenic 35.0%
!! AAGCTTACCAAGAGGTATTA+TGG + chr6_1:63560627-63560646 Msa0890600:intron 35.0%
TTGGGAATATAGACTTCTTC+TGG - chr6_1:63561089-63561108 None:intergenic 35.0%
AAAGTTGTCTATCAGCTACT+AGG + chr6_1:63561187-63561206 Msa0890600:intron 35.0%
AAGTTGTCTATCAGCTACTA+GGG + chr6_1:63561188-63561207 Msa0890600:intron 35.0%
GTAGTATTCAATGAAGGGAA+TGG + chr6_1:63556487-63556506 Msa0890600:intron 35.0%
!!! GATTTTTTCCTCTCACCTTT+CGG - chr6_1:63561730-63561749 None:intergenic 35.0%
TGAGAGGAAAAAATCAAAGC+AGG + chr6_1:63561735-63561754 Msa0890600:CDS 35.0%
CTTCCTACTGAAACACAATT+AGG + chr6_1:63561769-63561788 Msa0890600:CDS 35.0%
AGACCTAATTGTGTTTCAGT+AGG - chr6_1:63561775-63561794 None:intergenic 35.0%
GTAAATGTAGGTGAATGTTG+TGG - chr6_1:63561991-63562010 None:intergenic 35.0%
GTAAAGATGTTGGCAAATGT+CGG - chr6_1:63562093-63562112 None:intergenic 35.0%
GTAAAGATGTTGGCAAATGT+CGG - chr6_1:63562093-63562112 None:intergenic 35.0%
CAATTAAAGAACTCATCACC+TGG - chr6_1:63562315-63562334 None:intergenic 35.0%
CTAAGGGCTGTGAATCAATT+TGG + chr6_1:63555537-63555556 Msa0890600:CDS 40.0%
! GCATCTGAAATATAAGGGAG+GGG - chr6_1:63555647-63555666 None:intergenic 40.0%
!! TCTTCTGGTTCAATCAGCTT+GGG - chr6_1:63556198-63556217 None:intergenic 40.0%
TTGGACCTAATATCCTCTTC+TGG - chr6_1:63556213-63556232 None:intergenic 40.0%
ATGATTATCATGGCCCAAGT+TGG + chr6_1:63556262-63556281 Msa0890600:intron 40.0%
!! GTGCTTTTTAACAGCCAACT+TGG - chr6_1:63556279-63556298 None:intergenic 40.0%
!! GGCTGTTAAAAAGCACTAAG+TGG + chr6_1:63556283-63556302 Msa0890600:intron 40.0%
TTGGGAATATAGGCTTCTTC+TGG - chr6_1:63556326-63556345 None:intergenic 40.0%
AAAGCTGTCTATCAGCTACT+AGG + chr6_1:63556430-63556449 Msa0890600:intron 40.0%
TCTATCAGCTACTAGGATGT+AGG + chr6_1:63556437-63556456 Msa0890600:intron 40.0%
CTATCAGCTACTAGGATGTA+GGG + chr6_1:63556438-63556457 Msa0890600:intron 40.0%
!! CAATGAAAGCACCAGTGTAA+GGG - chr6_1:63556614-63556633 None:intergenic 40.0%
AGCCGTAACATCATCATTGT+TGG - chr6_1:63556649-63556668 None:intergenic 40.0%
!! GTATGTTGGTGATGGTATGT+TGG - chr6_1:63556790-63556809 None:intergenic 40.0%
GATCAGATCCATCAAACCTT+GGG - chr6_1:63556853-63556872 None:intergenic 40.0%
! TTTGATGGATCTGATCCCTT+AGG + chr6_1:63556857-63556876 Msa0890600:intron 40.0%
TGTAAAAAGAGGCCATTCTC+AGG - chr6_1:63556940-63556959 None:intergenic 40.0%
! GAGAATGGCCTCTTTTTACA+TGG + chr6_1:63556940-63556959 Msa0890600:intron 40.0%
! ATGGCCTCTTTTTACATGGA+AGG + chr6_1:63556944-63556963 Msa0890600:intron 40.0%
! TGGCCTCTTTTTACATGGAA+GGG + chr6_1:63556945-63556964 Msa0890600:intron 40.0%
TTCCCCTTCCATGTAAAAAG+AGG - chr6_1:63556951-63556970 None:intergenic 40.0%
! AAGCTTTGACATGGTACCAA+TGG + chr6_1:63556969-63556988 Msa0890600:intron 40.0%
TTTGGATCGTCATAGTGAGA+TGG - chr6_1:63557061-63557080 None:intergenic 40.0%
TCTCACTATGACGATCCAAA+AGG + chr6_1:63557061-63557080 Msa0890600:intron 40.0%
AACCTTGCAAATCGCATTAC+TGG + chr6_1:63557142-63557161 Msa0890600:intron 40.0%
TAGCTCAAGTAGAACTCTGA+TGG - chr6_1:63557172-63557191 None:intergenic 40.0%
CAAACTGATTGCTTGAGCTA+GGG - chr6_1:63557253-63557272 None:intergenic 40.0%
!!! TGGTATGTTGGTGGGTTTTT+GGG - chr6_1:63557394-63557413 None:intergenic 40.0%
!!! TTGGTATGTTGGTGGGTTTT+TGG - chr6_1:63557395-63557414 None:intergenic 40.0%
! ACATAGATTTTGTTCACGGC+GGG - chr6_1:63557460-63557479 None:intergenic 40.0%
AATAAGGTTGTTGGATCTGG+AGG - chr6_1:63557573-63557592 None:intergenic 40.0%
TCGGGTAGTAATAAGGTTGT+TGG - chr6_1:63557582-63557601 None:intergenic 40.0%
CATGTAAACTTATTTGGGCC+CGG - chr6_1:63557644-63557663 None:intergenic 40.0%
TACCAGAATCAATGAGAACC+TGG - chr6_1:63557731-63557750 None:intergenic 40.0%
!! AAGATTGAGCTTGGTGTAGT+GGG - chr6_1:63557802-63557821 None:intergenic 40.0%
!! AAAGATTGAGCTTGGTGTAG+TGG - chr6_1:63557803-63557822 None:intergenic 40.0%
AGACACTGAAAGATTGAGCT+TGG - chr6_1:63557811-63557830 None:intergenic 40.0%
AGCTCAATCTTTCAGTGTCT+TGG + chr6_1:63557811-63557830 Msa0890600:intron 40.0%
CAATCTTTCAGTGTCTTGGT+AGG + chr6_1:63557815-63557834 Msa0890600:intron 40.0%
TAGAACTTGTGGGCACATAA+AGG - chr6_1:63557864-63557883 None:intergenic 40.0%
ATTACCTCGGACAAACTTCA+AGG - chr6_1:63558014-63558033 None:intergenic 40.0%
CAATTGGGTTTGGAGATAAG+AGG - chr6_1:63558147-63558166 None:intergenic 40.0%
TGGAGGTAAAGTGGTAAGTT+CGG - chr6_1:63558227-63558246 None:intergenic 40.0%
! ATCCTTCTAAAAGTGGGATG+TGG - chr6_1:63558267-63558286 None:intergenic 40.0%
! GGGTTTGATCCTTCTAAAAG+TGG - chr6_1:63558274-63558293 None:intergenic 40.0%
GATATGGTCGAACATTGACA+GGG - chr6_1:63558294-63558313 None:intergenic 40.0%
!! CGAAGAAAAAGCACTAGAAC+TGG - chr6_1:63558389-63558408 None:intergenic 40.0%
!!! TTCTAGTGCTTTTTCTTCGC+CGG + chr6_1:63558390-63558409 Msa0890600:intron 40.0%
TGTTAGTCCGGAAAAAGGAT+GGG + chr6_1:63558416-63558435 Msa0890600:intron 40.0%
GCTCATCAATGGATGGAATA+GGG - chr6_1:63558501-63558520 None:intergenic 40.0%
AGCTCATCAATGGATGGAAT+AGG - chr6_1:63558502-63558521 None:intergenic 40.0%
TCAAGAAGCTCATCAATGGA+TGG - chr6_1:63558508-63558527 None:intergenic 40.0%
TTCCAAACTAGACCTTCGAT+CGG + chr6_1:63558552-63558571 Msa0890600:intron 40.0%
GGTGCATTGCTTAATCCAAA+AGG - chr6_1:63558664-63558683 None:intergenic 40.0%
TAGATTCATGGACGATTGGA+AGG - chr6_1:63558692-63558711 None:intergenic 40.0%
CTAAGTGATCTTCCATGCTA+CGG - chr6_1:63558776-63558795 None:intergenic 40.0%
!!! GCTGAAATTTTGGTTGGATC+AGG - chr6_1:63558926-63558945 None:intergenic 40.0%
!! GTCATCGCTGAAATTTTGGT+TGG - chr6_1:63558932-63558951 None:intergenic 40.0%
! CTTAGCTGCTTGATCGTTTT+TGG - chr6_1:63558968-63558987 None:intergenic 40.0%
AAAACGATCAAGCAGCTAAG+AGG + chr6_1:63558968-63558987 Msa0890600:intron 40.0%
! AAGCAGCTAAGAGGTTTTCT+TGG + chr6_1:63558977-63558996 Msa0890600:intron 40.0%
! AAGAGGTTTTCTTGGACTCA+CGG + chr6_1:63558985-63559004 Msa0890600:intron 40.0%
GTTCTACCGTAAGTTCGTTA+AGG + chr6_1:63559009-63559028 Msa0890600:intron 40.0%
TGTTAAAAGCTGCTTCTGCT+TGG - chr6_1:63559099-63559118 None:intergenic 40.0%
ATCATTGAAACAGATGCCTC+TGG + chr6_1:63559181-63559200 Msa0890600:intron 40.0%
! GGTGTTTGAATCACTTGCTA+AGG - chr6_1:63559393-63559412 None:intergenic 40.0%
ACCTGAACAGCAGTATTACT+TGG + chr6_1:63559410-63559429 Msa0890600:intron 40.0%
! TTGCTATTACAGTACCTCAG+TGG + chr6_1:63559529-63559548 Msa0890600:intron 40.0%
TGCTATTACAGTACCTCAGT+GGG + chr6_1:63559530-63559549 Msa0890600:intron 40.0%
TTATTCAAGAACTCCCACTG+AGG - chr6_1:63559546-63559565 None:intergenic 40.0%
GGAGTTCTTGAATAAGCTAC+AGG + chr6_1:63559551-63559570 Msa0890600:intron 40.0%
! TGAAAATGGGGATGTTTTGC+TGG - chr6_1:63559633-63559652 None:intergenic 40.0%
TTACGTCGCACTTGAAAATG+GGG - chr6_1:63559645-63559664 None:intergenic 40.0%
CTTACGTCGCACTTGAAAAT+GGG - chr6_1:63559646-63559665 None:intergenic 40.0%
! TCTTCTAACAGCACTGAGAT+TGG - chr6_1:63559709-63559728 None:intergenic 40.0%
!!! AGTGGTTTTAGTAAGCCGTA+AGG - chr6_1:63559886-63559905 None:intergenic 40.0%
!! CCGTGTGACTTTGAAATGAA+GGG - chr6_1:63559963-63559982 None:intergenic 40.0%
CCCTTCATTTCAAAGTCACA+CGG + chr6_1:63559960-63559979 Msa0890600:intron 40.0%
!! ACCGTGTGACTTTGAAATGA+AGG - chr6_1:63559964-63559983 None:intergenic 40.0%
CGGTTTGATTCAATACTGCA+AGG - chr6_1:63560108-63560127 None:intergenic 40.0%
AAAAGGGACAAAGGAAGATG+GGG - chr6_1:63560134-63560153 None:intergenic 40.0%
CAAAAGGGACAAAGGAAGAT+GGG - chr6_1:63560135-63560154 None:intergenic 40.0%
!!! ACACCTTTTGAAGCGGTTTA+TGG + chr6_1:63560360-63560379 Msa0890600:CDS 40.0%
TGCTTTCTCGGATGTATTGA+GGG - chr6_1:63560404-63560423 None:intergenic 40.0%
CTTCCAGATTTGTGCTTTCT+CGG - chr6_1:63560416-63560435 None:intergenic 40.0%
! AGAAAGCACAAATCTGGAAG+CGG + chr6_1:63560416-63560435 Msa0890600:CDS 40.0%
GAATAAGCTCAAGAAAGCTC+AGG + chr6_1:63560485-63560504 Msa0890600:CDS 40.0%
CTTATCTGCGTACATCTTCA+TGG - chr6_1:63560514-63560533 None:intergenic 40.0%
TTCACAAACACAAGATCTCC+TGG - chr6_1:63560561-63560580 None:intergenic 40.0%
TATGTATCGTCAATCCACCA+TGG + chr6_1:63560587-63560606 Msa0890600:intron 40.0%
ATGTATCGTCAATCCACCAT+GGG + chr6_1:63560588-63560607 Msa0890600:intron 40.0%
ATGGCTTTCAGCAGTTTGAA+GGG - chr6_1:63560654-63560673 None:intergenic 40.0%
TATGGCTTTCAGCAGTTTGA+AGG - chr6_1:63560655-63560674 None:intergenic 40.0%
AATGTTTCAGCTGAGAAACG+TGG - chr6_1:63560734-63560753 None:intergenic 40.0%
AAATTATCATGGTCCTTGGG+TGG - chr6_1:63560789-63560808 None:intergenic 40.0%
GGGAAATTATCATGGTCCTT+GGG - chr6_1:63560792-63560811 None:intergenic 40.0%
AGGGAAATTATCATGGTCCT+TGG - chr6_1:63560793-63560812 None:intergenic 40.0%
ATGTTGCATCTTCAGGGTAT+GGG - chr6_1:63560851-63560870 None:intergenic 40.0%
ATACCCTGAAGATGCAACAT+GGG + chr6_1:63560851-63560870 Msa0890600:intron 40.0%
!! CTCTTCTGGTTCATCAACTT+GGG - chr6_1:63560961-63560980 None:intergenic 40.0%
GAATGATTATCATGTGCCCA+AGG + chr6_1:63561022-63561041 Msa0890600:intron 40.0%
!! TGCTTTTTAACAGCCACCTT+GGG - chr6_1:63561041-63561060 None:intergenic 40.0%
! TCATTCTGTAAGGGTGTGAA+AGG - chr6_1:63561362-63561381 None:intergenic 40.0%
CTTAGATTGCAGTTCACGAA+TGG + chr6_1:63561473-63561492 Msa0890600:intron 40.0%
!! ACTGATGAGTACTGATGTTG+TGG - chr6_1:63561831-63561850 None:intergenic 40.0%
AGACTGAGCAGTAAAGATGT+TGG - chr6_1:63562103-63562122 None:intergenic 40.0%
AGACTGAGCAGTAAAGATGT+TGG - chr6_1:63562103-63562122 None:intergenic 40.0%
ACGAATGTCGTTGAATGTTG+TGG - chr6_1:63562261-63562280 None:intergenic 40.0%
!! CTCTTCTGGTTCAATCAGCT+TGG - chr6_1:63556199-63556218 None:intergenic 45.0%
CAAGCTGATTGAACCAGAAG+AGG + chr6_1:63556197-63556216 Msa0890600:intron 45.0%
TTCCTTTCACACCCTTACAC+TGG + chr6_1:63556600-63556619 Msa0890600:intron 45.0%
!! GCAATGAAAGCACCAGTGTA+AGG - chr6_1:63556615-63556634 None:intergenic 45.0%
CACTGGTGCTTTCATTGCTA+TGG + chr6_1:63556617-63556636 Msa0890600:intron 45.0%
GGTTGGATACTTCAGTGGAA+AGG - chr6_1:63556725-63556744 None:intergenic 45.0%
!! ACCACCAGATTTTCAAGCCA+TGG + chr6_1:63556761-63556780 Msa0890600:intron 45.0%
!! CCACCAGATTTTCAAGCCAT+GGG + chr6_1:63556762-63556781 Msa0890600:intron 45.0%
GTTCCCATGGCTTGAAAATC+TGG - chr6_1:63556768-63556787 None:intergenic 45.0%
TGATGGTATGTCAGTTCCCA+TGG - chr6_1:63556781-63556800 None:intergenic 45.0%
!! TGGTGATGGTATGTTGGTGA+TGG - chr6_1:63556798-63556817 None:intergenic 45.0%
! GAAGTGTGGTATGTTGGTGA+TGG - chr6_1:63556812-63556831 None:intergenic 45.0%
GGATCAGATCCATCAAACCT+TGG - chr6_1:63556854-63556873 None:intergenic 45.0%
ATGGATCTGATCCCTTAGGT+TGG + chr6_1:63556861-63556880 Msa0890600:intron 45.0%
! GGCCTCTTTTTACATGGAAG+GGG + chr6_1:63556946-63556965 Msa0890600:intron 45.0%
TACCAATGGATGCACTCCAA+TGG + chr6_1:63556983-63557002 Msa0890600:intron 45.0%
!! AACTTGAACAGAGCGCCTTT+TGG - chr6_1:63557079-63557098 None:intergenic 45.0%
GTCCAGTAATGCGATTTGCA+AGG - chr6_1:63557147-63557166 None:intergenic 45.0%
ATTGCTTGAGCTAGGGAAAG+GGG - chr6_1:63557246-63557265 None:intergenic 45.0%
GATTGCTTGAGCTAGGGAAA+GGG - chr6_1:63557247-63557266 None:intergenic 45.0%
TGATTGCTTGAGCTAGGGAA+AGG - chr6_1:63557248-63557267 None:intergenic 45.0%
CCAAACTGATTGCTTGAGCT+AGG - chr6_1:63557254-63557273 None:intergenic 45.0%
CCTAGCTCAAGCAATCAGTT+TGG + chr6_1:63557251-63557270 Msa0890600:intron 45.0%
TGGCTTAGTGTAAAAGGAGG+TGG - chr6_1:63557310-63557329 None:intergenic 45.0%
! ACCTCCTTTTACACTAAGCC+AGG + chr6_1:63557309-63557328 Msa0890600:intron 45.0%
ACCTGGCTTAGTGTAAAAGG+AGG - chr6_1:63557313-63557332 None:intergenic 45.0%
!!! GGTATGTTGGTGGGTTTTTG+GGG - chr6_1:63557393-63557412 None:intergenic 45.0%
CTTGTAATTCAGCTGGTGAG+AGG - chr6_1:63557437-63557456 None:intergenic 45.0%
GGTGTATCAGTGGTATCTTC+TGG - chr6_1:63557552-63557571 None:intergenic 45.0%
! AGTGGGTTCGGGTAGTAATA+AGG - chr6_1:63557589-63557608 None:intergenic 45.0%
GGGTCATATAGCCAAATCAC+CGG + chr6_1:63557704-63557723 Msa0890600:intron 45.0%
GAATCAATGAGAACCTGGAC+CGG - chr6_1:63557726-63557745 None:intergenic 45.0%
!! GTCCAGGTTCTCATTGATTC+TGG + chr6_1:63557726-63557745 Msa0890600:intron 45.0%
GCGTCATAATCAGTAAGCAC+AGG - chr6_1:63557986-63558005 None:intergenic 45.0%
GAAGTTTGTCCGAGGTAATC+AGG + chr6_1:63558015-63558034 Msa0890600:intron 45.0%
GAGTTGGCATACAGTGTGAA+GGG - chr6_1:63558122-63558141 None:intergenic 45.0%
TTGGAGATAAGAGGTGGAGT+TGG - chr6_1:63558138-63558157 None:intergenic 45.0%
TTGGGTTTGGAGATAAGAGG+TGG - chr6_1:63558144-63558163 None:intergenic 45.0%
ATGTGGTGGTTGATTGCTCT+GGG - chr6_1:63558250-63558269 None:intergenic 45.0%
! CTTCTAAAAGTGGGATGTGG+TGG - chr6_1:63558264-63558283 None:intergenic 45.0%
!! CACCACATCCCACTTTTAGA+AGG + chr6_1:63558262-63558281 Msa0890600:intron 45.0%
CGATATGGTCGAACATTGAC+AGG - chr6_1:63558295-63558314 None:intergenic 45.0%
ATTCGTGAGATGCTCCATCA+AGG + chr6_1:63558352-63558371 Msa0890600:intron 45.0%
! TGGGTTGAATGACACCTTGA+TGG - chr6_1:63558369-63558388 None:intergenic 45.0%
! TTTTTCCGGACTAACAGCAC+CGG - chr6_1:63558412-63558431 None:intergenic 45.0%
CTGTTAGTCCGGAAAAAGGA+TGG + chr6_1:63558415-63558434 Msa0890600:intron 45.0%
GTTAGTCCGGAAAAAGGATG+GGG + chr6_1:63558417-63558436 Msa0890600:intron 45.0%
TCGAGATGTTAACGCCATCA+CGG + chr6_1:63558462-63558481 Msa0890600:intron 45.0%
TCCAAACTAGACCTTCGATC+GGG + chr6_1:63558553-63558572 Msa0890600:intron 45.0%
! GAGTTTCTCGTCATGCCTTT+TGG + chr6_1:63558646-63558665 Msa0890600:intron 45.0%
ATGGACGATTGGAAGGATGA+TGG - chr6_1:63558685-63558704 None:intergenic 45.0%
CTTAGTCTATAGCCGTAGCA+TGG + chr6_1:63558761-63558780 Msa0890600:intron 45.0%
!!! TGCTTGATCGTTTTTGGTGC+TGG - chr6_1:63558962-63558981 None:intergenic 45.0%
! AGAGGTTTTCTTGGACTCAC+GGG + chr6_1:63558986-63559005 Msa0890600:intron 45.0%
AAATTGGGTAATGCGAGGAC+CGG - chr6_1:63559148-63559167 None:intergenic 45.0%
CCTCAAAATTGGGTAATGCG+AGG - chr6_1:63559153-63559172 None:intergenic 45.0%
! CCTCGCATTACCCAATTTTG+AGG + chr6_1:63559150-63559169 Msa0890600:intron 45.0%
GAAACAGATGCCTCTGGTAT+AGG + chr6_1:63559187-63559206 Msa0890600:intron 45.0%
AGATGCCTCTGGTATAGGTA+TGG + chr6_1:63559192-63559211 Msa0890600:intron 45.0%
GATGCCTCTGGTATAGGTAT+GGG + chr6_1:63559193-63559212 Msa0890600:intron 45.0%
ATGCCTCTGGTATAGGTATG+GGG + chr6_1:63559194-63559213 Msa0890600:intron 45.0%
GCCAAGTAATACTGCTGTTC+AGG - chr6_1:63559414-63559433 None:intergenic 45.0%
CTGGATCCAGTTGTACTTCT+TGG - chr6_1:63559614-63559633 None:intergenic 45.0%
GCTTACGTCGCACTTGAAAA+TGG - chr6_1:63559647-63559666 None:intergenic 45.0%
AGCGGAATCACGAAGACTTA+CGG + chr6_1:63559757-63559776 Msa0890600:intron 45.0%
TGTGTATTGGGTAGGCATGA+AGG + chr6_1:63559795-63559814 Msa0890600:intron 45.0%
GTGTATTGGGTAGGCATGAA+GGG + chr6_1:63559796-63559815 Msa0890600:intron 45.0%
!!! GAGTGGCGTTTTTGGTTTGT+TGG - chr6_1:63559858-63559877 None:intergenic 45.0%
TCCCAAACTGTAGTTGGGAT+GGG - chr6_1:63559910-63559929 None:intergenic 45.0%
TTCCCAAACTGTAGTTGGGA+TGG - chr6_1:63559911-63559930 None:intergenic 45.0%
AAGTCACACGGTCATTCTAG+TGG + chr6_1:63559972-63559991 Msa0890600:intron 45.0%
!! CAAAGTGTGCTGCTTTGGAT+AGG - chr6_1:63560008-63560027 None:intergenic 45.0%
CTATCCAAAGCAGCACACTT+TGG + chr6_1:63560006-63560025 Msa0890600:intron 45.0%
!! AGATCCAAAGTGTGCTGCTT+TGG - chr6_1:63560013-63560032 None:intergenic 45.0%
CAAATGATCTGCAAGCTCCA+TGG + chr6_1:63560078-63560097 Msa0890600:intron 45.0%
CAATACTGCAAGGCATACCA+TGG - chr6_1:63560098-63560117 None:intergenic 45.0%
CCAAAAGGGACAAAGGAAGA+TGG - chr6_1:63560136-63560155 None:intergenic 45.0%
! CCATCTTCCTTTGTCCCTTT+TGG + chr6_1:63560133-63560152 Msa0890600:intron 45.0%
GGCAGAAGACATCCTTAACT+TGG - chr6_1:63560184-63560203 None:intergenic 45.0%
! TTTGACCGTCACTTTGTGGA+TGG - chr6_1:63560209-63560228 None:intergenic 45.0%
ACATCCATTCATGCGTCTAC+AGG + chr6_1:63560333-63560352 Msa0890600:intron 45.0%
CATCCATTCATGCGTCTACA+GGG + chr6_1:63560334-63560353 Msa0890600:intron 45.0%
!! AGGGATCACACCTTTTGAAG+CGG + chr6_1:63560353-63560372 Msa0890600:intron 45.0%
TTCTCGGATGTATTGAGGGA+GGG - chr6_1:63560400-63560419 None:intergenic 45.0%
TTTCTCGGATGTATTGAGGG+AGG - chr6_1:63560401-63560420 None:intergenic 45.0%
GTGCTTTCTCGGATGTATTG+AGG - chr6_1:63560405-63560424 None:intergenic 45.0%
! CATCCGAGAAAGCACAAATC+TGG + chr6_1:63560410-63560429 Msa0890600:CDS 45.0%
! CTCCTGGCACAAAAGTATGA+GGG - chr6_1:63560545-63560564 None:intergenic 45.0%
! TCTCCTGGCACAAAAGTATG+AGG - chr6_1:63560546-63560565 None:intergenic 45.0%
GGACTAACAAGCTTACCAAG+AGG + chr6_1:63560619-63560638 Msa0890600:intron 45.0%
TGGCTTTCAGCAGTTTGAAG+GGG - chr6_1:63560653-63560672 None:intergenic 45.0%
AGCTGAGAAACGTGGAAAAC+CGG - chr6_1:63560726-63560745 None:intergenic 45.0%
CGACGAGAGGGAAATTATCA+TGG - chr6_1:63560800-63560819 None:intergenic 45.0%
TAATTTCCCTCTCGTCGAAC+CGG + chr6_1:63560803-63560822 Msa0890600:intron 45.0%
TGTTGCATCTTCAGGGTATG+GGG - chr6_1:63560850-63560869 None:intergenic 45.0%
CATGTTGCATCTTCAGGGTA+TGG - chr6_1:63560852-63560871 None:intergenic 45.0%
CATACCCTGAAGATGCAACA+TGG + chr6_1:63560850-63560869 Msa0890600:intron 45.0%
CTTCCCATGTTGCATCTTCA+GGG - chr6_1:63560857-63560876 None:intergenic 45.0%
TCTTCCCATGTTGCATCTTC+AGG - chr6_1:63560858-63560877 None:intergenic 45.0%
! AGGACAAGGTGTTTGTGGAA+GGG + chr6_1:63560919-63560938 Msa0890600:intron 45.0%
!! CCTCTTCTGGTTCATCAACT+TGG - chr6_1:63560962-63560981 None:intergenic 45.0%
!! CCAAGTTGATGAACCAGAAG+AGG + chr6_1:63560959-63560978 Msa0890600:intron 45.0%
ATGAACCAGAAGAGGACGTT+AGG + chr6_1:63560967-63560986 Msa0890600:intron 45.0%
TGATTATCATGTGCCCAAGG+TGG + chr6_1:63561025-63561044 Msa0890600:intron 45.0%
!! GTGCTTTTTAACAGCCACCT+TGG - chr6_1:63561042-63561061 None:intergenic 45.0%
!! GGTGGCTGTTAAAAAGCACT+AGG + chr6_1:63561043-63561062 Msa0890600:intron 45.0%
!! GGCTGTTAAAAAGCACTAGG+TGG + chr6_1:63561046-63561065 Msa0890600:intron 45.0%
TCTATCAGCTACTAGGGTGT+AGG + chr6_1:63561194-63561213 Msa0890600:intron 45.0%
CTATCAGCTACTAGGGTGTA+GGG + chr6_1:63561195-63561214 Msa0890600:intron 45.0%
ATGAAATGCCGAAAGGTGAG+AGG + chr6_1:63561719-63561738 Msa0890600:CDS 45.0%
! GTACTGATGTTGTGGTGCAT+GGG - chr6_1:63561823-63561842 None:intergenic 45.0%
!! AGTACTGATGTTGTGGTGCA+TGG - chr6_1:63561824-63561843 None:intergenic 45.0%
TAGGTGAATGTTGTGGTGCA+TGG - chr6_1:63561984-63562003 None:intergenic 45.0%
GCAAATGTCGGTGAATGTTG+TGG - chr6_1:63562081-63562100 None:intergenic 45.0%
GCAAATGTCGGTGAATGTTG+TGG - chr6_1:63562081-63562100 None:intergenic 45.0%
GATCAGTCCAACATGAATCC+AGG + chr6_1:63562294-63562313 Msa0890600:CDS 45.0%
CTCATCACCTGGATTCATGT+TGG - chr6_1:63562304-63562323 None:intergenic 45.0%
!!! TAATATTTTTTTTTTTTTTG+CGG + chr6_1:63561498-63561517 Msa0890600:intron 5.0%
!! ATGTAGGGCTAGCTGTCATC+TGG + chr6_1:63556453-63556472 Msa0890600:intron 50.0%
! CACCAGTGTAAGGGTGTGAA+AGG - chr6_1:63556605-63556624 None:intergenic 50.0%
! ACGCAGGTTGGATACTTCAG+TGG - chr6_1:63556730-63556749 None:intergenic 50.0%
CCCATGGCTTGAAAATCTGG+TGG - chr6_1:63556765-63556784 None:intergenic 50.0%
! ATGGCGGAAGTGTGGTATGT+TGG - chr6_1:63556818-63556837 None:intergenic 50.0%
!! CAAGTTTGATGGCGGAAGTG+TGG - chr6_1:63556826-63556845 None:intergenic 50.0%
TGGGAGCTCAAGTTTGATGG+CGG - chr6_1:63556834-63556853 None:intergenic 50.0%
CCTTGGGAGCTCAAGTTTGA+TGG - chr6_1:63556837-63556856 None:intergenic 50.0%
CCATCAAACTTGAGCTCCCA+AGG + chr6_1:63556834-63556853 Msa0890600:intron 50.0%
CTTGAGCTCCCAAGGTTTGA+TGG + chr6_1:63556842-63556861 Msa0890600:intron 50.0%
!! ATTCTCAGGCGTTGATCCTC+TGG - chr6_1:63556926-63556945 None:intergenic 50.0%
AGAGGATCAACGCCTGAGAA+TGG + chr6_1:63556925-63556944 Msa0890600:intron 50.0%
! TGGAAGGGGAAGCTTTGACA+TGG + chr6_1:63556960-63556979 Msa0890600:intron 50.0%
ACATGTGCCAAGAGAGGAGT+TGG - chr6_1:63557009-63557028 None:intergenic 50.0%
GTAGGAACATGTGCCAAGAG+AGG - chr6_1:63557015-63557034 None:intergenic 50.0%
GCACATGTTCCTACACGCTT+TGG + chr6_1:63557021-63557040 Msa0890600:intron 50.0%
!! TCCTACACGCTTTGGAGCTT+CGG + chr6_1:63557029-63557048 Msa0890600:intron 50.0%
! TGGATCTGGAGGTGTATCAG+TGG - chr6_1:63557562-63557581 None:intergenic 50.0%
ACCCAACACGCGAAGAGTTT+GGG - chr6_1:63557688-63557707 None:intergenic 50.0%
TATAGCCAAATCACCGGTCC+AGG + chr6_1:63557710-63557729 Msa0890600:intron 50.0%
TGACTCCCATGAGTTCCTTG+TGG + chr6_1:63557892-63557911 Msa0890600:intron 50.0%
!! TAGCGGAGCAGATCTGGTTT+TGG + chr6_1:63557934-63557953 Msa0890600:intron 50.0%
!!! AGCGGAGCAGATCTGGTTTT+GGG + chr6_1:63557935-63557954 Msa0890600:intron 50.0%
!!! ATCTGGTTTTGGGTGTCCAG+TGG + chr6_1:63557945-63557964 Msa0890600:intron 50.0%
GTCCAGTGGCTTCGTTCATT+AGG + chr6_1:63557959-63557978 Msa0890600:intron 50.0%
GACCTAATGAACGAAGCCAC+TGG - chr6_1:63557964-63557983 None:intergenic 50.0%
CTGACCTTGAAGTTTGTCCG+AGG + chr6_1:63558007-63558026 Msa0890600:intron 50.0%
TCCTACACCACTACCAGAAG+CGG + chr6_1:63558057-63558076 Msa0890600:intron 50.0%
!! TACAGTGTGAAGGGCATCAG+TGG - chr6_1:63558113-63558132 None:intergenic 50.0%
GGAGTTGGCATACAGTGTGA+AGG - chr6_1:63558123-63558142 None:intergenic 50.0%
GATGTGGTGGTTGATTGCTC+TGG - chr6_1:63558251-63558270 None:intergenic 50.0%
!! GGTGCTGTTAGTCCGGAAAA+AGG + chr6_1:63558411-63558430 Msa0890600:intron 50.0%
GAACCTGTCTTTCACCGTGA+TGG - chr6_1:63558479-63558498 None:intergenic 50.0%
CCAAACTAGACCTTCGATCG+GGG + chr6_1:63558554-63558573 Msa0890600:intron 50.0%
CGAGAAACTCATAGCGTCCT+TGG - chr6_1:63558636-63558655 None:intergenic 50.0%
! ATTGTGTCTCCCAAGGGTGT+GGG + chr6_1:63558899-63558918 Msa0890600:intron 50.0%
! GAGGTTTTCTTGGACTCACG+GGG + chr6_1:63558987-63559006 Msa0890600:intron 50.0%
AATTGGGTAATGCGAGGACC+GGG - chr6_1:63559147-63559166 None:intergenic 50.0%
TGCCTCTGGTATAGGTATGG+GGG + chr6_1:63559195-63559214 Msa0890600:intron 50.0%
! GGGGCTGTGCTGATATAGAA+GGG + chr6_1:63559214-63559233 Msa0890600:intron 50.0%
! GGGCTGTGCTGATATAGAAG+GGG + chr6_1:63559215-63559234 Msa0890600:intron 50.0%
TTCCATGCTTCCACCATAGC+AGG + chr6_1:63559730-63559749 Msa0890600:intron 50.0%
TCCACCATAGCAGGTCATAG+CGG + chr6_1:63559739-63559758 Msa0890600:intron 50.0%
GATTCCGCTATGACCTGCTA+TGG - chr6_1:63559746-63559765 None:intergenic 50.0%
! AGGAAGCTGAGTGGCGTTTT+TGG - chr6_1:63559866-63559885 None:intergenic 50.0%
AACGCCACTCAGCTTCCTTA+CGG + chr6_1:63559868-63559887 Msa0890600:intron 50.0%
TAAGCCGTAAGGAAGCTGAG+TGG - chr6_1:63559875-63559894 None:intergenic 50.0%
TGCCCATCCCAACTACAGTT+TGG + chr6_1:63559905-63559924 Msa0890600:intron 50.0%
GCCCATCCCAACTACAGTTT+GGG + chr6_1:63559906-63559925 Msa0890600:intron 50.0%
GAGCCCAACGATGAAGTCTA+AGG - chr6_1:63559941-63559960 None:intergenic 50.0%
TCACACGGTCATTCTAGTGG+TGG + chr6_1:63559975-63559994 Msa0890600:intron 50.0%
!! AGTGTGCTGCTTTGGATAGG+CGG - chr6_1:63560005-63560024 None:intergenic 50.0%
GACAAAGGAAGATGGGGTCA+CGG - chr6_1:63560128-63560147 None:intergenic 50.0%
GCTCTTGCCAAAAGGGACAA+AGG - chr6_1:63560143-63560162 None:intergenic 50.0%
GCCTACCATCCACAAAGTGA+CGG + chr6_1:63560201-63560220 Msa0890600:intron 50.0%
! ACCGTCACTTTGTGGATGGT+AGG - chr6_1:63560205-63560224 None:intergenic 50.0%
! TCGGTTTGACCGTCACTTTG+TGG - chr6_1:63560213-63560232 None:intergenic 50.0%
GATCCCTGTAGACGCATGAA+TGG - chr6_1:63560340-63560359 None:intergenic 50.0%
ATGTATTGAGGGAGGGATGG+AGG - chr6_1:63560393-63560412 None:intergenic 50.0%
AAGCACAAATCTGGAAGCGG+TGG + chr6_1:63560419-63560438 Msa0890600:CDS 50.0%
AATCCACCATGGGAGAGCAA+CGG + chr6_1:63560598-63560617 Msa0890600:intron 50.0%
GAAGGGGCCATAATACCTCT+TGG - chr6_1:63560637-63560656 None:intergenic 50.0%
GAAAACCGGATGAATGCGAC+TGG - chr6_1:63560712-63560731 None:intergenic 50.0%
GTTGCATCTTCAGGGTATGG+GGG - chr6_1:63560849-63560868 None:intergenic 50.0%
GTATCCATCCTTCCACCTTG+AGG + chr6_1:63560899-63560918 Msa0890600:intron 50.0%
TTGTCCTCAAGGTGGAAGGA+TGG - chr6_1:63560906-63560925 None:intergenic 50.0%
ATCCTTCCACCTTGAGGACA+AGG + chr6_1:63560905-63560924 Msa0890600:intron 50.0%
CAAACACCTTGTCCTCAAGG+TGG - chr6_1:63560914-63560933 None:intergenic 50.0%
CCACAAACACCTTGTCCTCA+AGG - chr6_1:63560917-63560936 None:intergenic 50.0%
! CCTTGAGGACAAGGTGTTTG+TGG + chr6_1:63560914-63560933 Msa0890600:intron 50.0%
! GAGGACAAGGTGTTTGTGGA+AGG + chr6_1:63560918-63560937 Msa0890600:intron 50.0%
! GGACAAGGTGTTTGTGGAAG+GGG + chr6_1:63560920-63560939 Msa0890600:intron 50.0%
! AAGGTGTTTGTGGAAGGGGA+AGG + chr6_1:63560924-63560943 Msa0890600:intron 50.0%
AGGTGTTTGTGGAAGGGGAA+GGG + chr6_1:63560925-63560944 Msa0890600:intron 50.0%
GGTCCAAACGCAAGACAGCA+AGG + chr6_1:63556226-63556245 Msa0890600:intron 55.0%
TGCTAAGCGTGTACGCAGGT+TGG - chr6_1:63556742-63556761 None:intergenic 55.0%
GGCCATTGGAGTGCATCCAT+TGG - chr6_1:63556988-63557007 None:intergenic 55.0%
CCAAGAGAGGAGTTGGCCAT+TGG - chr6_1:63557002-63557021 None:intergenic 55.0%
CCAATGGCCAACTCCTCTCT+TGG + chr6_1:63556999-63557018 Msa0890600:intron 55.0%
ACCGAAGCTCCAAAGCGTGT+AGG - chr6_1:63557033-63557052 None:intergenic 55.0%
! CAAGGTTTTCGAACGCCGTC+TGG - chr6_1:63557129-63557148 None:intergenic 55.0%
CTGTAGTTCCCGTCGGATTC+CGG - chr6_1:63557214-63557233 None:intergenic 55.0%
GGAAAGCCTGTAGTTCCCGT+CGG - chr6_1:63557221-63557240 None:intergenic 55.0%
CTTGAGCTAGGGAAAGGGGT+TGG - chr6_1:63557242-63557261 None:intergenic 55.0%
TGGGGTGAAGCTGTGACTGT+GGG - chr6_1:63557375-63557394 None:intergenic 55.0%
TTGGGGTGAAGCTGTGACTG+TGG - chr6_1:63557376-63557395 None:intergenic 55.0%
!! GCTGGTGAGAGGCGTTTGAT+AGG - chr6_1:63557426-63557445 None:intergenic 55.0%
!! GGTACTAGGGTAGTGGGTTC+GGG - chr6_1:63557600-63557619 None:intergenic 55.0%
!! GGGTACTAGGGTAGTGGGTT+CGG - chr6_1:63557601-63557620 None:intergenic 55.0%
GGTTCGGGTACTAGGGTAGT+GGG - chr6_1:63557606-63557625 None:intergenic 55.0%
! CACAGTGGGTTCGGGTACTA+GGG - chr6_1:63557613-63557632 None:intergenic 55.0%
! ACACAGTGGGTTCGGGTACT+AGG - chr6_1:63557614-63557633 None:intergenic 55.0%
! TCGTCTGACACAGTGGGTTC+GGG - chr6_1:63557621-63557640 None:intergenic 55.0%
! GTCGTCTGACACAGTGGGTT+CGG - chr6_1:63557622-63557641 None:intergenic 55.0%
AACCCACTGTGTCAGACGAC+CGG + chr6_1:63557622-63557641 Msa0890600:intron 55.0%
CCAACACGCGAAGAGTTTGG+GGG - chr6_1:63557686-63557705 None:intergenic 55.0%
CCCAACACGCGAAGAGTTTG+GGG - chr6_1:63557687-63557706 None:intergenic 55.0%
CCCCAAACTCTTCGCGTGTT+GGG + chr6_1:63557684-63557703 Msa0890600:intron 55.0%
GACCCAACACGCGAAGAGTT+TGG - chr6_1:63557689-63557708 None:intergenic 55.0%
GAGAACCTGGACCGGTGATT+TGG - chr6_1:63557718-63557737 None:intergenic 55.0%
GACCGCGTTGCTAGACAGTT+GGG + chr6_1:63557773-63557792 Msa0890600:intron 55.0%
GACCCAACTGTCTAGCAACG+CGG - chr6_1:63557778-63557797 None:intergenic 55.0%
TCCTCTTAGCGGAGCAGATC+TGG + chr6_1:63557928-63557947 Msa0890600:intron 55.0%
ACCAGATCTGCTCCGCTAAG+AGG - chr6_1:63557932-63557951 None:intergenic 55.0%
!! AGTGTGAAGGGCATCAGTGG+AGG - chr6_1:63558110-63558129 None:intergenic 55.0%
! TGCTCTGGGTGGAGGTAAAG+TGG - chr6_1:63558236-63558255 None:intergenic 55.0%
! TGGTTGATTGCTCTGGGTGG+AGG - chr6_1:63558244-63558263 None:intergenic 55.0%
! TGGTGGTTGATTGCTCTGGG+TGG - chr6_1:63558247-63558266 None:intergenic 55.0%
TCCGGAAAAAGGATGGGGCA+TGG + chr6_1:63558422-63558441 Msa0890600:intron 55.0%
! GCCATGCCCCATCCTTTTTC+CGG - chr6_1:63558426-63558445 None:intergenic 55.0%
ACGCCATCACGGTGAAAGAC+AGG + chr6_1:63558473-63558492 Msa0890600:intron 55.0%
CCCCGATCGAAGGTCTAGTT+TGG - chr6_1:63558557-63558576 None:intergenic 55.0%
TCTGATGGTACCCCGATCGA+AGG - chr6_1:63558567-63558586 None:intergenic 55.0%
ACTGCTTTCCGCACTCACCA+AGG + chr6_1:63558616-63558635 Msa0890600:intron 55.0%
CATAGCGTCCTTGGTGAGTG+CGG - chr6_1:63558627-63558646 None:intergenic 55.0%
GGCCACATTGTGTCTCCCAA+GGG + chr6_1:63558893-63558912 Msa0890600:intron 55.0%
CACCCTTGGGAGACACAATG+TGG - chr6_1:63558898-63558917 None:intergenic 55.0%
CATTGTGTCTCCCAAGGGTG+TGG + chr6_1:63558898-63558917 Msa0890600:intron 55.0%
AGAGGCGATGACCAAAACCC+CGG + chr6_1:63559126-63559145 Msa0890600:intron 55.0%
! TAATGCGAGGACCGGGGTTT+TGG - chr6_1:63559140-63559159 None:intergenic 55.0%
ATTGGGTAATGCGAGGACCG+GGG - chr6_1:63559146-63559165 None:intergenic 55.0%
AGCCCCCATACCTATACCAG+AGG - chr6_1:63559200-63559219 None:intergenic 55.0%
! GGGGGCTGTGCTGATATAGA+AGG + chr6_1:63559213-63559232 Msa0890600:intron 55.0%
GTAACTCTGTTCTGCCCACC+TGG - chr6_1:63559474-63559493 None:intergenic 55.0%
! GACCTGCTATGGTGGAAGCA+TGG - chr6_1:63559735-63559754 None:intergenic 55.0%
TCCGCTATGACCTGCTATGG+TGG - chr6_1:63559743-63559762 None:intergenic 55.0%
ACTGTAGTTGGGATGGGCAG+TGG - chr6_1:63559904-63559923 None:intergenic 55.0%
CGGATGTATTGAGGGAGGGA+TGG - chr6_1:63560396-63560415 None:intergenic 55.0%
! CGCCCTCATACTTTTGTGCC+AGG + chr6_1:63560540-63560559 Msa0890600:CDS 55.0%
GTTAGTCCGTTGCTCTCCCA+TGG - chr6_1:63560607-63560626 None:intergenic 55.0%
ACCCACCAGTCGCATTCATC+CGG + chr6_1:63560704-63560723 Msa0890600:intron 55.0%
ACCGGATGAATGCGACTGGT+GGG - chr6_1:63560708-63560727 None:intergenic 55.0%
AACCGGATGAATGCGACTGG+TGG - chr6_1:63560709-63560728 None:intergenic 55.0%
! AACCGGCTCACATCTTGGAC+TGG + chr6_1:63560820-63560839 Msa0890600:intron 55.0%
TGCCAGTCCAAGATGTGAGC+CGG - chr6_1:63560825-63560844 None:intergenic 55.0%
CACCTTGTCCTCAAGGTGGA+AGG - chr6_1:63560910-63560929 None:intergenic 55.0%
GGTGTTTGTGGAAGGGGAAG+GGG + chr6_1:63560926-63560945 Msa0890600:intron 55.0%
TTGGGCCTAACGTCCTCTTC+TGG - chr6_1:63560975-63560994 None:intergenic 55.0%
! GGCCTTGCTGTCTTGCGTTT+GGG - chr6_1:63556231-63556250 None:intergenic 55.0%
! GGGCCTTGCTGTCTTGCGTT+TGG - chr6_1:63556232-63556251 None:intergenic 60.0%
! GTGGTGCTAAGCGTGTACGC+AGG - chr6_1:63556746-63556765 None:intergenic 60.0%
GGCTTGAAGCCGGAATCCGA+CGG + chr6_1:63557202-63557221 Msa0890600:intron 60.0%
GCTTGAAGCCGGAATCCGAC+GGG + chr6_1:63557203-63557222 Msa0890600:intron 60.0%
CGGAATCCGACGGGAACTAC+AGG + chr6_1:63557212-63557231 Msa0890600:intron 60.0%
GGGCGGAAAGAAGAACGAGG+TGG - chr6_1:63557354-63557373 None:intergenic 60.0%
GTGGGGCGGAAAGAAGAACG+AGG - chr6_1:63557357-63557376 None:intergenic 60.0%
GTGAAGCTGTGACTGTGGGG+CGG - chr6_1:63557371-63557390 None:intergenic 60.0%
GGGGTGAAGCTGTGACTGTG+GGG - chr6_1:63557374-63557393 None:intergenic 60.0%
! CGGCGGGCTTGTAATTCAGC+TGG - chr6_1:63557444-63557463 None:intergenic 60.0%
GGGTTCGGGTACTAGGGTAG+TGG - chr6_1:63557607-63557626 None:intergenic 60.0%
ACCCACTGTGTCAGACGACC+GGG + chr6_1:63557623-63557642 Msa0890600:intron 60.0%
CCCCCAAACTCTTCGCGTGT+TGG + chr6_1:63557683-63557702 Msa0890600:intron 60.0%
GGACCGCGTTGCTAGACAGT+TGG + chr6_1:63557772-63557791 Msa0890600:intron 60.0%
!! GCCGCTTCTGGTAGTGGTGT+AGG - chr6_1:63558061-63558080 None:intergenic 60.0%
AGCAACGCCGCTTCTGGTAG+TGG - chr6_1:63558067-63558086 None:intergenic 60.0%
TGATGCAGCAACGCCGCTTC+TGG - chr6_1:63558073-63558092 None:intergenic 60.0%
!! CTTCGCCGGTGCTGTTAGTC+CGG + chr6_1:63558404-63558423 Msa0890600:intron 60.0%
GGGCCACATTGTGTCTCCCA+AGG + chr6_1:63558892-63558911 Msa0890600:intron 60.0%
GGATCAGGTCCCACACCCTT+GGG - chr6_1:63558911-63558930 None:intergenic 60.0%
TGGATCAGGTCCCACACCCT+TGG - chr6_1:63558912-63558931 None:intergenic 60.0%
AGTCCGTTGCTCTCCCATGG+TGG - chr6_1:63560604-63560623 None:intergenic 60.0%
GGATGAATGCGACTGGTGGG+TGG - chr6_1:63560705-63560724 None:intergenic 60.0%
GTCCTTGGGTGGCAGTGGAA+GGG - chr6_1:63560778-63560797 None:intergenic 60.0%
TCATGGTCCTTGGGTGGCAG+TGG - chr6_1:63560783-63560802 None:intergenic 60.0%
!! TGTGAGCCGGTTCGACGAGA+GGG - chr6_1:63560812-63560831 None:intergenic 60.0%
!! ATGTGAGCCGGTTCGACGAG+AGG - chr6_1:63560813-63560832 None:intergenic 60.0%
! CGTCGAACCGGCTCACATCT+TGG + chr6_1:63560815-63560834 Msa0890600:intron 60.0%
GGCCCAAACGCAAGACAGCA+AGG + chr6_1:63560988-63561007 Msa0890600:intron 60.0%
! GGGCCTTGCTGTCTTGCGTT+TGG - chr6_1:63556232-63556251 None:intergenic 60.0%
GCCCGGTCGTCTGACACAGT+GGG - chr6_1:63557627-63557646 None:intergenic 65.0%
AGCCCTTCCACTGCCACCCA+AGG + chr6_1:63560773-63560792 Msa0890600:intron 65.0%
GGTCCTTGGGTGGCAGTGGA+AGG - chr6_1:63560779-63560798 None:intergenic 65.0%
GGCCCGGTCGTCTGACACAG+TGG - chr6_1:63557628-63557647 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 63555387 63562335 63555387 ID=Msa0890600;Name=Msa0890600
chr6_1 mRNA 63555387 63562335 63555387 ID=Msa0890600-mRNA-1;Parent=Msa0890600;Name=Msa0890600-mRNA-1;_AED=0.20;_eAED=0.29;_QI=0|0|0|1|0.33|0.5|4|0|351
chr6_1 exon 63555387 63555567 63555387 ID=Msa0890600-mRNA-1:exon:11607;Parent=Msa0890600-mRNA-1
chr6_1 exon 63555663 63555704 63555663 ID=Msa0890600-mRNA-1:exon:11608;Parent=Msa0890600-mRNA-1
chr6_1 exon 63560355 63560569 63560355 ID=Msa0890600-mRNA-1:exon:11609;Parent=Msa0890600-mRNA-1
chr6_1 exon 63561718 63562335 63561718 ID=Msa0890600-mRNA-1:exon:11610;Parent=Msa0890600-mRNA-1
chr6_1 CDS 63555387 63555567 63555387 ID=Msa0890600-mRNA-1:cds;Parent=Msa0890600-mRNA-1
chr6_1 CDS 63555663 63555704 63555663 ID=Msa0890600-mRNA-1:cds;Parent=Msa0890600-mRNA-1
chr6_1 CDS 63560355 63560569 63560355 ID=Msa0890600-mRNA-1:cds;Parent=Msa0890600-mRNA-1
chr6_1 CDS 63561718 63562335 63561718 ID=Msa0890600-mRNA-1:cds;Parent=Msa0890600-mRNA-1
Gene Sequence

>Msa0890600

ATGTGCAAACATGTTCCAAGGAAAGTTTTGAATGAAAATAAACATAATGGCACAGAAGAAACTAATGTTGATGTGGTTGAAAAGAATAATTATGAACCCCCAACAAAAAAGAACCGTTTAACATGGTCTCAAGCAATGCATCAAGAATTTCTAAGGGCTGTGAATCAATTTGGCCTTGATAATGCAAAGCCAAAAAAAATTATTCAAGTGATGAATGTTCCTGGGATCACACCTTTTGAAGCGGTTTATGGAAAAACACCTCCATCCCTCCCTCAATACATCCGAGAAAGCACAAATCTGGAAGCGGTGGAGTTTGAGCTTACAAGCCGTGATGAAATTCTAACAAAGTTGAAGAATAAGCTCAAGAAAGCTCAGGAATCCATGAAGATGTACGCAGATAAGAAACGTCGCCCTCATACTTTTGTGCCAGGAGATCTTAATGAAATGCCGAAAGGTGAGAGGAAAAAATCAAAGCAGGATCAATGTCATCTTCCTACTGAAACACAATTAGGTCTTGAACTTGATCAAAATGTTAAAAATCCCATGCACCACAACATCAGTACTCATCAGTCTAATGTTCAGAATTTCGTCATACAATGTGACAACAATTCTCATGCTCCACAATATTCATCAAAATTGGCCAACATTTTTACTGATAAGTCTAATATTTTCAATTCAATCATACAATGTGACAAAAACTACCATGCACCACAACATTCACCTACATTTACCAACATTTTTACTACTCAGTCTAATGTTATGAATTCAGTCATACAACATGACAATAATTCTCATGCACCACAACATTCACCGACATTTGCCAACATCTTTACTGCTCAGTCTAGTGTTCCTAATTCAGTCATACAATGTGACAATAATTCTCATTCACCACAACATTCACCGACATTTGCCAACATCTTTACTGCTCAGTCTAGTGTTCTAAATTCGGTCATACAATGTGACAATAATTCTCATGCACCACAACATTCAACGACATTCGTCAATAATTTTACTGATCAGTCCAACATGAATCCAGGTGATGAGTTCTTTAATTGA
Protein sequence

>Msa0890600

MCKHVPRKVLNENKHNGTEETNVDVVEKNNYEPPTKKNRLTWSQAMHQEFLRAVNQFGLDNAKPKKIIQVMNVPGITPFEAVYGKTPPSLPQYIRESTNLEAVEFELTSRDEILTKLKNKLKKAQESMKMYADKKRRPHTFVPGDLNEMPKGERKKSKQDQCHLPTETQLGLELDQNVKNPMHHNISTHQSNVQNFVIQCDNNSHAPQYSSKLANIFTDKSNIFNSIIQCDKNYHAPQHSPTFTNIFTTQSNVMNSVIQHDNNSHAPQHSPTFANIFTAQSSVPNSVIQCDNNSHSPQHSPTFANIFTAQSSVLNSVIQCDNNSHAPQHSTTFVNNFTDQSNMNPGDEFFN*