Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901550 | AES77141.2 | 45.833 | 120 | 50 | 2 | 804 | 909 | 9 | 127 | 5.68e-20 | 108 |
| Msa0901550 | AES77141.2 | 75.164 | 608 | 97 | 6 | 79 | 654 | 9 | 594 | 0.0 | 863 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901550 | sp|F4K933|ET2_ARATH | 42.951 | 305 | 159 | 6 | 677 | 971 | 8 | 307 | 2.87e-64 | 228 |
| Msa0901550 | sp|F4K933|ET2_ARATH | 38.060 | 134 | 64 | 3 | 7 | 126 | 55 | 183 | 1.52e-17 | 90.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901550 | G7KJT6 | 45.833 | 120 | 50 | 2 | 804 | 909 | 9 | 127 | 2.72e-20 | 108 |
| Msa0901550 | G7KJT6 | 75.164 | 608 | 97 | 6 | 79 | 654 | 9 | 594 | 0.0 | 863 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0901550 | TF | HRT |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901550 | MtrunA17_Chr6g0488421 | 75.768 | 586 | 96 | 5 | 79 | 633 | 22 | 592 | 0.0 | 838 |
| Msa0901550 | MtrunA17_Chr6g0488421 | 45.833 | 120 | 50 | 2 | 804 | 909 | 22 | 140 | 2.44e-24 | 108 |
| Msa0901550 | MtrunA17_Chr6g0488451 | 90.759 | 303 | 28 | 0 | 684 | 986 | 1 | 303 | 0.0 | 587 |
| Msa0901550 | MtrunA17_Chr6g0488451 | 63.492 | 126 | 38 | 1 | 7 | 124 | 41 | 166 | 3.46e-46 | 170 |
| Msa0901550 | MtrunA17_Chr7g0256351 | 74.411 | 297 | 75 | 1 | 685 | 980 | 6 | 302 | 1.27e-152 | 456 |
| Msa0901550 | MtrunA17_Chr7g0256351 | 36.624 | 314 | 162 | 10 | 7 | 295 | 45 | 346 | 1.49e-47 | 174 |
| Msa0901550 | MtrunA17_Chr6g0488431 | 88.000 | 75 | 9 | 0 | 7 | 81 | 38 | 112 | 5.73e-38 | 137 |
| Msa0901550 | MtrunA17_Chr6g0488431 | 61.607 | 112 | 38 | 1 | 683 | 794 | 2 | 108 | 7.66e-38 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901550 | AT5G56780.1 | 42.951 | 305 | 159 | 6 | 677 | 971 | 8 | 307 | 2.92e-65 | 228 |
| Msa0901550 | AT5G56780.1 | 38.060 | 134 | 64 | 3 | 7 | 126 | 55 | 183 | 1.55e-18 | 90.5 |
| Msa0901550 | AT5G56770.1 | 35.185 | 216 | 118 | 3 | 638 | 853 | 8 | 201 | 1.08e-31 | 125 |
| Msa0901550 | AT5G56770.1 | 39.216 | 153 | 74 | 6 | 7 | 155 | 94 | 231 | 1.28e-20 | 93.2 |
Find 184 sgRNAs with CRISPR-Local
Find 585 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATCCTTCGCTGTCTTTA+AGG | 0.099426 | 6_1:+98292339 | None:intergenic |
| CTCTTCCCTTTCTTCTTTAA+AGG | 0.120496 | 6_1:+98292967 | None:intergenic |
| CTTCATAAGGGAAGTCTTAC+AGG | 0.181011 | 6_1:-98291628 | Msa0901550:intron |
| CTTCAAAAGGGAAGTCTTAC+TGG | 0.209552 | 6_1:-98291721 | Msa0901550:CDS |
| ACAAAAGTTGGCTGGGAATA+TGG | 0.217127 | 6_1:-98292174 | Msa0901550:CDS |
| GGCAACATACTTGATTTAAT+TGG | 0.224850 | 6_1:+98284345 | None:intergenic |
| TAAAATTTGTGGAGTGAATT+TGG | 0.231337 | 6_1:-98284193 | Msa0901550:CDS |
| AGTGATGGAGGAAGAGTTTC+AGG | 0.243095 | 6_1:-98292458 | Msa0901550:CDS |
| TTCTTATTCCTTTATGTTCA+TGG | 0.250228 | 6_1:+98292869 | None:intergenic |
| CCTTCTGATTGGGGAAAATA+TGG | 0.266162 | 6_1:-98294608 | None:intergenic |
| GGTTCGTCGACTAGTGATTT+AGG | 0.281347 | 6_1:-98294525 | Msa0901550:CDS |
| AACAATTACGGTGCCATAAA+GGG | 0.294522 | 6_1:-98292259 | Msa0901550:CDS |
| TAACAATTACGGTGCCATAA+AGG | 0.301114 | 6_1:-98292260 | Msa0901550:CDS |
| TGTACAGCCTTCCTTTCCTT+TGG | 0.307211 | 6_1:+98285309 | None:intergenic |
| TTGCCTCAAAATCTTCATAA+AGG | 0.316183 | 6_1:+98292554 | None:intergenic |
| GGTTCCCAATTGTTTATAGA+TGG | 0.316381 | 6_1:-98294338 | Msa0901550:CDS |
| CGGTACGTCGGAGGTGGCTT+TGG | 0.317378 | 6_1:-98293614 | Msa0901550:CDS |
| ATCTGTGTTGACTAGCAGTT+TGG | 0.320195 | 6_1:-98285227 | Msa0901550:CDS |
| CCATAACCTACCAGAAAATT+CGG | 0.327726 | 6_1:-98285275 | Msa0901550:CDS |
| TGGCAGAGATGGAGGTCATT+TGG | 0.336090 | 6_1:-98294409 | Msa0901550:CDS |
| AAGAAAGGGAAGAGTGATAA+AGG | 0.336242 | 6_1:-98292958 | Msa0901550:CDS |
| TGGTAGAAATGAAGCTCATT+TGG | 0.337116 | 6_1:-98285110 | Msa0901550:CDS |
| TTGGCTGGGAATATGGAAAA+AGG | 0.338346 | 6_1:-98292167 | Msa0901550:CDS |
| GTTGTATCTTGAACTATCTT+AGG | 0.344160 | 6_1:+98284240 | None:intergenic |
| AGTGAAGGGTAGAAGTGATT+TGG | 0.349328 | 6_1:+98284386 | None:intergenic |
| TTCTTATTGGTCCTTCTGAT+TGG | 0.353606 | 6_1:-98285342 | Msa0901550:CDS |
| TCGGATTTGTTATCTTTCAT+AGG | 0.354876 | 6_1:+98284324 | None:intergenic |
| AAGAAAGGGAAGAGTGATAA+AGG | 0.358781 | 6_1:-98292682 | Msa0901550:CDS |
| CTGGCTGCTCCTTGTGGAAC+AGG | 0.360850 | 6_1:-98292615 | Msa0901550:CDS |
| TGGTACGTCAGAGGTGGTTT+TGG | 0.364286 | 6_1:-98293259 | Msa0901550:CDS |
| GAAACAATGACCGTCCCTTT+TGG | 0.364941 | 6_1:+98285056 | None:intergenic |
| GGCAGAGATGGAGGTCATTT+GGG | 0.366944 | 6_1:-98294408 | Msa0901550:CDS |
| ATGATTCTAGCTTCGTTCAT+TGG | 0.367999 | 6_1:-98286042 | Msa0901550:CDS |
| CGCGTAGTAGTGGTTTATAT+TGG | 0.370365 | 6_1:-98294468 | Msa0901550:CDS |
| TACTGGTTGTTTCCCTTCAA+AGG | 0.370544 | 6_1:-98291704 | Msa0901550:CDS |
| ACATGTTGCTTACCTTCATA+AGG | 0.371385 | 6_1:-98291641 | Msa0901550:CDS |
| TGAATTTGAACATGCGAGAT+AGG | 0.378945 | 6_1:+98284274 | None:intergenic |
| TGAAATTGCTTCCCTTCAAA+AGG | 0.380084 | 6_1:-98291734 | Msa0901550:CDS |
| ATTTGAATCTTCTCACCAAA+AGG | 0.382515 | 6_1:-98285071 | Msa0901550:CDS |
| GTTCGTCGACTAGTGATTTA+GGG | 0.384876 | 6_1:-98294524 | Msa0901550:CDS |
| ACTAGCATCATGAAACATAT+TGG | 0.386678 | 6_1:+98292513 | None:intergenic |
| GCAGCCCATCTATAAACAAT+TGG | 0.391240 | 6_1:+98294333 | None:intergenic |
| TTGGGTGATAATTGTGCATC+AGG | 0.396778 | 6_1:-98294390 | Msa0901550:CDS |
| GGTAGAAATGAAGCTCATTT+GGG | 0.398202 | 6_1:-98285109 | Msa0901550:CDS |
| TGGTACGTCGGAGGTGGCTT+TGG | 0.401469 | 6_1:-98293025 | Msa0901550:CDS |
| ATGTAAAACTTCCCCTTTGA+AGG | 0.402904 | 6_1:+98291660 | None:intergenic |
| CAAGTCTAAATCAGAAATCT+TGG | 0.403491 | 6_1:-98292812 | Msa0901550:CDS |
| TGGGGAAAATATGGATCTAC+AGG | 0.405057 | 6_1:-98294599 | Msa0901550:CDS |
| TTTCATGAGATCTTTCTTCA+AGG | 0.405599 | 6_1:-98285037 | Msa0901550:CDS |
| ACTGGTTGTTTCCCTTCAAA+GGG | 0.408509 | 6_1:-98291703 | Msa0901550:CDS |
| TACTGGCTGCTTCCCTTCAA+AGG | 0.410398 | 6_1:-98291673 | Msa0901550:CDS |
| TGGTAAGTCGGAGGTGGTAT+TGG | 0.411057 | 6_1:-98293497 | Msa0901550:CDS |
| CGAGTAGTTGTGGTTTATCT+AGG | 0.411149 | 6_1:-98285169 | Msa0901550:CDS |
| TCTGTGTTGACTAGCAGTTT+GGG | 0.416124 | 6_1:-98285226 | Msa0901550:CDS |
| AATGAAGCTCATTTGGGAAA+TGG | 0.430887 | 6_1:-98285103 | Msa0901550:CDS |
| TCTTATTGGTCCTTCTGATT+GGG | 0.433564 | 6_1:-98285341 | Msa0901550:CDS |
| TGTTTGCAAGGCATCTCCCT+TGG | 0.436980 | 6_1:+98284536 | None:intergenic |
| CTCCATCTCTGCCATAACTT+TGG | 0.438868 | 6_1:+98294418 | None:intergenic |
| TGGTACGTCTGATGTGGTTT+TGG | 0.442826 | 6_1:-98292749 | Msa0901550:CDS |
| TGCGTTCTTGAGGCTGAGAC+TGG | 0.447875 | 6_1:-98292634 | Msa0901550:CDS |
| GAGAAGAGTGGTAAAATTTG+TGG | 0.450994 | 6_1:-98284204 | Msa0901550:CDS |
| TGTGGTGTTGCTTGAAGTGA+TGG | 0.452779 | 6_1:-98292473 | Msa0901550:CDS |
| GCTGCCATTGTCTGCTTCAT+CGG | 0.453379 | 6_1:+98284305 | None:intergenic |
| TCTAAATCAGAAATCTTGGC+TGG | 0.456737 | 6_1:-98292808 | Msa0901550:CDS |
| GGAGCCCATCTATAAACAAT+TGG | 0.460709 | 6_1:+98285010 | None:intergenic |
| TAGGAAAAGCTGATAATGTA+AGG | 0.463358 | 6_1:-98285150 | Msa0901550:CDS |
| TGTTGTCGGTACGTCGGAGG+TGG | 0.465319 | 6_1:-98293620 | Msa0901550:CDS |
| GTTAGGTGTCATGAACATAA+AGG | 0.469142 | 6_1:-98284129 | Msa0901550:CDS |
| ACTGGCTGCTTCCCTTCAAA+GGG | 0.471071 | 6_1:-98291672 | Msa0901550:CDS |
| GTAAGCTGCCATGAACATAA+AGG | 0.471158 | 6_1:-98292877 | Msa0901550:CDS |
| AGGACAAGACTCCAATGTTA+TGG | 0.472021 | 6_1:-98285130 | Msa0901550:CDS |
| TGAGTACATTTGATTATGCT+TGG | 0.472258 | 6_1:-98284500 | Msa0901550:CDS |
| TGGTACGTCAGAGGTGACTT+TGG | 0.473142 | 6_1:-98293142 | Msa0901550:CDS |
| AACCTTGGAGGATCAGTTGA+AGG | 0.481453 | 6_1:-98292374 | Msa0901550:CDS |
| CTCCAAAGTTATGGCAGAGA+TGG | 0.483770 | 6_1:-98294420 | Msa0901550:CDS |
| AAATGCAAACAAAAGTTGGC+TGG | 0.484257 | 6_1:-98292182 | Msa0901550:CDS |
| GTTATTAAGCTCCACGCACT+TGG | 0.485686 | 6_1:+98292279 | None:intergenic |
| ATTTGTCGTCTTCAAGCTGA+TGG | 0.487334 | 6_1:+98293695 | None:intergenic |
| CTTCATTTCTACCATAACAT+TGG | 0.487845 | 6_1:+98285119 | None:intergenic |
| GCGTCTCCTTTAAAGAAGAA+AGG | 0.490646 | 6_1:-98292973 | Msa0901550:CDS |
| AACAGGAACTTTGATCGTGC+TGG | 0.490680 | 6_1:-98292598 | Msa0901550:CDS |
| GTTCCCAATTGTTTATAGAT+GGG | 0.490688 | 6_1:-98294337 | Msa0901550:CDS |
| GCTTGGAACACAATTAATAA+CGG | 0.491690 | 6_1:-98284483 | Msa0901550:CDS |
| CTGAGACTGGCTGCTCCTTG+TGG | 0.495309 | 6_1:-98292621 | Msa0901550:CDS |
| TTGAAAATGCAAACAAAAGT+TGG | 0.496314 | 6_1:-98292186 | Msa0901550:CDS |
| CTCGCATGTTCAAATTCAAC+CGG | 0.497027 | 6_1:-98284269 | Msa0901550:CDS |
| ATCTGAAAATGTTCTTGTGC+CGG | 0.498102 | 6_1:+98284413 | None:intergenic |
| GAAGTTGAGGGTTAAAACCT+TGG | 0.498646 | 6_1:-98292389 | Msa0901550:CDS |
| TTCTAGCTTCGTTCATTGGA+AGG | 0.499105 | 6_1:-98286038 | Msa0901550:intron |
| CAGTTGAGATTCTGTTTGCA+AGG | 0.499330 | 6_1:+98284524 | None:intergenic |
| CCTACCAGAAAATTCGGGTC+CGG | 0.500097 | 6_1:-98285269 | Msa0901550:CDS |
| CATGTTGCTTACCTTCATAA+GGG | 0.501232 | 6_1:-98291640 | Msa0901550:CDS |
| CCTTCACTCAAAAGAAAGTA+GGG | 0.503569 | 6_1:-98284371 | Msa0901550:CDS |
| GTGGAGCTTAATAACAATTA+CGG | 0.503730 | 6_1:-98292271 | Msa0901550:CDS |
| TTTGAATCTTCTCACCAAAA+GGG | 0.504759 | 6_1:-98285070 | Msa0901550:CDS |
| ATGCTCAACAAAATATCTTC+CGG | 0.505608 | 6_1:-98284432 | Msa0901550:CDS |
| CATAACCTACCAGAAAATTC+GGG | 0.505850 | 6_1:-98285274 | Msa0901550:CDS |
| GAACGAAGACTTGAAGTTGA+GGG | 0.508098 | 6_1:-98292401 | Msa0901550:CDS |
| ATTTGTCGTCTGCGAGCTGA+TGG | 0.510309 | 6_1:+98293223 | None:intergenic |
| CCCTTCACTCAAAAGAAAGT+AGG | 0.510670 | 6_1:-98284372 | Msa0901550:CDS |
| CTGTAAAATCGAATGCAGAT+AGG | 0.511860 | 6_1:-98292435 | Msa0901550:CDS |
| CAAGATTTCTGATTTAGACT+TGG | 0.512503 | 6_1:+98292813 | None:intergenic |
| TTGACTAGCAGTTTGGGGCG+CGG | 0.514412 | 6_1:-98285220 | Msa0901550:CDS |
| CTGTAAGACTTCCCTTATGA+AGG | 0.517105 | 6_1:+98291629 | None:intergenic |
| CAGCCCATCTATAAACAATT+GGG | 0.524933 | 6_1:+98294334 | None:intergenic |
| GAGCATTTCAAGAATATCAC+CGG | 0.525607 | 6_1:+98284449 | None:intergenic |
| AGAGGTGACTTTGGAAGTTG+AGG | 0.528501 | 6_1:-98293133 | Msa0901550:CDS |
| CTACCAGAAAATTCGGGTCC+GGG | 0.529284 | 6_1:-98285268 | Msa0901550:CDS |
| GAAATTGCTTCCCTTCAAAA+GGG | 0.529820 | 6_1:-98291733 | Msa0901550:CDS |
| CGTCTCCTTTAAAGAAGAAA+GGG | 0.533503 | 6_1:-98292972 | Msa0901550:CDS |
| GATTGGGAAGATTATTCCAA+AGG | 0.533673 | 6_1:-98285325 | Msa0901550:CDS |
| GAAGATTACCGAGTTGAAAG+AGG | 0.534559 | 6_1:-98292212 | Msa0901550:CDS |
| GGAAGATTATTCCAAAGGAA+AGG | 0.537391 | 6_1:-98285320 | Msa0901550:CDS |
| TACTTTACAAGCTTCACCAT+CGG | 0.537393 | 6_1:+98293943 | None:intergenic |
| TGATGTTGGTACGTCGGAGG+TGG | 0.543860 | 6_1:-98293031 | Msa0901550:CDS |
| GCATGGAACAAAGTTAATAA+CGG | 0.546568 | 6_1:-98293890 | Msa0901550:intron |
| GGAGGTGGCTTTGGAAGTTG+AGG | 0.549182 | 6_1:-98293605 | Msa0901550:CDS |
| TGATGTTGGTAAGTCGGAGG+TGG | 0.549671 | 6_1:-98293503 | Msa0901550:CDS |
| TTCCTTCAACTGATCCTCCA+AGG | 0.550625 | 6_1:+98292372 | None:intergenic |
| AATGCAAACAAAAGTTGGCT+GGG | 0.557092 | 6_1:-98292181 | Msa0901550:CDS |
| TATTTCTTGCTTTCGCTCTG+TGG | 0.557916 | 6_1:-98292491 | Msa0901550:CDS |
| GTTGAGGGTTAAAACCTTGG+AGG | 0.559815 | 6_1:-98292386 | Msa0901550:CDS |
| GGAGGTGGTATTGGAAGTTG+AGG | 0.560183 | 6_1:-98293488 | Msa0901550:CDS |
| TGTAAAACTTCCCCTTTGAA+GGG | 0.561552 | 6_1:+98291661 | None:intergenic |
| TGATCGTGCTGGCTTCGTGA+AGG | 0.562946 | 6_1:-98292587 | Msa0901550:CDS |
| GATTATTCCAAAGGAAAGGA+AGG | 0.563588 | 6_1:-98285316 | Msa0901550:CDS |
| AGTGTGGGAGTGTATGAGCT+TGG | 0.566389 | 6_1:-98294552 | Msa0901550:CDS |
| TTCAACACCCTCTTTCAACT+CGG | 0.567041 | 6_1:+98292204 | None:intergenic |
| CTAAATCAGAAATCTTGGCT+GGG | 0.567331 | 6_1:-98292807 | Msa0901550:CDS |
| GAACTATCTTAGGACGCGAC+CGG | 0.567906 | 6_1:+98284250 | None:intergenic |
| GAAGGTCGAGTGCGTTCTTG+AGG | 0.569335 | 6_1:-98292644 | Msa0901550:CDS |
| ATTTAACATCTGTGAGCTGA+TGG | 0.570958 | 6_1:+98293461 | None:intergenic |
| GAATAATCTTCCCAATCAGA+AGG | 0.571601 | 6_1:+98285331 | None:intergenic |
| AATAACGGTCCACGGCGTCC+CGG | 0.572061 | 6_1:-98284468 | Msa0901550:CDS |
| TAGAGACATTTGATTATGCA+TGG | 0.572285 | 6_1:-98293907 | Msa0901550:CDS |
| CACAACTACTCGACACGAGT+CGG | 0.572516 | 6_1:+98285180 | None:intergenic |
| CACTACTACGCGATGAGGGT+CGG | 0.574007 | 6_1:+98294479 | None:intergenic |
| GAATGCAGATAGGCTAAAGC+AGG | 0.576873 | 6_1:-98292425 | Msa0901550:CDS |
| AGGCGAGGCAAACAAGAAGA+AGG | 0.577475 | 6_1:-98292938 | Msa0901550:CDS |
| CAAAGTTATGGCAGAGATGG+AGG | 0.581386 | 6_1:-98294417 | Msa0901550:CDS |
| AAACCACTACTACGCGATGA+GGG | 0.582802 | 6_1:+98294475 | None:intergenic |
| CGACCCTCATCGCGTAGTAG+TGG | 0.584628 | 6_1:-98294478 | Msa0901550:CDS |
| GGAGTGTATGAGCTTGGTGT+AGG | 0.586874 | 6_1:-98294546 | Msa0901550:CDS |
| AAGATTACCGAGTTGAAAGA+GGG | 0.588318 | 6_1:-98292211 | Msa0901550:CDS |
| TGGTTGTTTCCCTTCAAAGG+GGG | 0.596692 | 6_1:-98291701 | Msa0901550:CDS |
| AGAACGAAGACTTGAAGTTG+AGG | 0.598074 | 6_1:-98292402 | Msa0901550:CDS |
| AGGCGAGGCGAACAAGAAGA+AGG | 0.599152 | 6_1:-98292662 | Msa0901550:CDS |
| CTGCCACAAAATTTCAGTGT+GGG | 0.601821 | 6_1:-98294567 | Msa0901550:CDS |
| CTGTGTTGACTAGCAGTTTG+GGG | 0.603432 | 6_1:-98285225 | Msa0901550:CDS |
| ACAATTACGGTGCCATAAAG+GGG | 0.606801 | 6_1:-98292258 | Msa0901550:CDS |
| AATTGTTGTCGGTACGTCGG+AGG | 0.606980 | 6_1:-98293623 | Msa0901550:CDS |
| ACTCCGAGTTCATAGACTCC+CGG | 0.608999 | 6_1:+98285250 | None:intergenic |
| TGGTGTTGGTACGTCAGAGG+TGG | 0.611119 | 6_1:-98293265 | Msa0901550:CDS |
| AAATGATATTGGTACGTCAG+AGG | 0.614648 | 6_1:-98293151 | Msa0901550:CDS |
| GGAGGTGGCTTTGGAAGCTG+AGG | 0.616164 | 6_1:-98293016 | Msa0901550:CDS |
| TAAACCACTACTACGCGATG+AGG | 0.619750 | 6_1:+98294474 | None:intergenic |
| AGATGTTGAAGCCAAGTGCG+TGG | 0.619891 | 6_1:-98292290 | Msa0901550:CDS |
| AATCTTCTCACCAAAAGGGA+CGG | 0.621847 | 6_1:-98285066 | Msa0901550:CDS |
| TTCTATTTGTACAAAGACGC+CGG | 0.623541 | 6_1:-98284163 | Msa0901550:CDS |
| GGTCCGGGAGTCTATGAACT+CGG | 0.623764 | 6_1:-98285253 | Msa0901550:CDS |
| AGAATATCACCGGGACGCCG+TGG | 0.625598 | 6_1:+98284459 | None:intergenic |
| CTGGTTGTTTCCCTTCAAAG+GGG | 0.637955 | 6_1:-98291702 | Msa0901550:CDS |
| GTTGAACAGATGCAAACCAA+GGG | 0.638402 | 6_1:-98284552 | Msa0901550:intron |
| GCTAAGGTTGACCATCAACT+CGG | 0.639233 | 6_1:-98292724 | Msa0901550:CDS |
| ACACAATTAATAACGGTCCA+CGG | 0.642408 | 6_1:-98284476 | Msa0901550:CDS |
| ATCAAAGTTCCTGTTCCACA+AGG | 0.643457 | 6_1:+98292606 | None:intergenic |
| CAACTCCTTAAAGACAGCGA+AGG | 0.644625 | 6_1:-98292344 | Msa0901550:CDS |
| AAATGGTGTTGGTACGTCAG+AGG | 0.644749 | 6_1:-98293268 | Msa0901550:CDS |
| TGATGTTGGTACGTCTGATG+TGG | 0.645458 | 6_1:-98292755 | Msa0901550:CDS |
| TGTTGAACAGATGCAAACCA+AGG | 0.647561 | 6_1:-98284553 | Msa0901550:intron |
| AACTACTCGACACGAGTCGG+TGG | 0.649363 | 6_1:+98285183 | None:intergenic |
| AGCATTTCAAGAATATCACC+GGG | 0.651967 | 6_1:+98284450 | None:intergenic |
| AAATGATGTTGGTAAGTCGG+AGG | 0.659032 | 6_1:-98293506 | Msa0901550:CDS |
| AGGGAAGAGTGATAAAGGCG+AGG | 0.661540 | 6_1:-98292677 | Msa0901550:CDS |
| AAATGATGTTGGTACGTCGG+AGG | 0.665439 | 6_1:-98293034 | Msa0901550:CDS |
| AGGGAAGAGTGATAAAGGCG+AGG | 0.671170 | 6_1:-98292953 | Msa0901550:CDS |
| AAATCCGATGAAGCAGACAA+TGG | 0.675612 | 6_1:-98284309 | Msa0901550:CDS |
| CAATTACGGTGCCATAAAGG+GGG | 0.679621 | 6_1:-98292257 | Msa0901550:CDS |
| GGTGTTGCTTGAAGTGATGG+AGG | 0.685411 | 6_1:-98292470 | Msa0901550:CDS |
| CCTGCCACAAAATTTCAGTG+TGG | 0.687926 | 6_1:-98294568 | Msa0901550:CDS |
| GGTTGACCATCAACTCGGCG+AGG | 0.692349 | 6_1:-98292719 | Msa0901550:CDS |
| CTGGCTGCTTCCCTTCAAAG+GGG | 0.702731 | 6_1:-98291671 | Msa0901550:CDS |
| GTTGAACAGATGGAGACCGA+TGG | 0.714850 | 6_1:-98293959 | Msa0901550:intron |
| GGTTGACAATCAGCTCACTG+AGG | 0.745907 | 6_1:-98292995 | Msa0901550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAAATAAAATATATT+TGG | - | chr6_1:98291789-98291808 | Msa0901550:intron | 0.0% |
| !!! | AAATTATGCATTTTTTTATT+AGG | - | chr6_1:98287835-98287854 | Msa0901550:intron | 10.0% |
| !!! | AATTATGCATTTTTTTATTA+GGG | - | chr6_1:98287836-98287855 | Msa0901550:intron | 10.0% |
| !!! | TTTTAGTATGTAATTTTTTA+TGG | - | chr6_1:98289200-98289219 | Msa0901550:intron | 10.0% |
| !!! | TATTATTATTTTTTTGCTAA+TGG | + | chr6_1:98290186-98290205 | None:intergenic | 10.0% |
| !! | TAAAAAATTAGAGTAAAAAA+AGG | - | chr6_1:98291030-98291049 | Msa0901550:intron | 10.0% |
| !!! | TTATTTCTTCTTTAATTTTT+TGG | - | chr6_1:98291869-98291888 | Msa0901550:intron | 10.0% |
| !! | CAAATAAAAAAAATTAAAAG+TGG | + | chr6_1:98291915-98291934 | None:intergenic | 10.0% |
| !! | AATTAAAATTAATAGATTAG+AGG | + | chr6_1:98292676-98292695 | None:intergenic | 10.0% |
| !!! | TCATTTATATTTAATCTTTT+GGG | + | chr6_1:98294055-98294074 | None:intergenic | 10.0% |
| !!! | TTCATTTATATTTAATCTTT+TGG | + | chr6_1:98294056-98294075 | None:intergenic | 10.0% |
| !! | AAAAGATTAAATATAAATGA+AGG | - | chr6_1:98294055-98294074 | Msa0901550:intron | 10.0% |
| !!! | TCAATTTGTTAATATCAATA+AGG | - | chr6_1:98284394-98284413 | Msa0901550:CDS | 15.0% |
| !! | TAGGAAATCTAAATAAAAAA+AGG | + | chr6_1:98286741-98286760 | None:intergenic | 15.0% |
| !!! | TCTTTATTTGTTTTCTTTTA+AGG | - | chr6_1:98286840-98286859 | Msa0901550:intron | 15.0% |
| !!! | TTGTTATGAAATTTTGATTT+TGG | + | chr6_1:98287205-98287224 | None:intergenic | 15.0% |
| !!! | TTTATTTTTTCTTTTTTGAG+TGG | + | chr6_1:98287648-98287667 | None:intergenic | 15.0% |
| !! | TTAACTTAAAAATAGAAACA+TGG | + | chr6_1:98287711-98287730 | None:intergenic | 15.0% |
| !!! | ATAATTGCTAATTTTGATTT+TGG | - | chr6_1:98287751-98287770 | Msa0901550:intron | 15.0% |
| !!! | ATTATGCATTTTTTTATTAG+GGG | - | chr6_1:98287837-98287856 | Msa0901550:intron | 15.0% |
| !!! | TTTGTTTGTCTTTTATTTAT+TGG | + | chr6_1:98288064-98288083 | None:intergenic | 15.0% |
| !!! | AATTTCGTTTTTATATGTTT+AGG | - | chr6_1:98288182-98288201 | Msa0901550:intron | 15.0% |
| !!! | TTATTGATTTTTTTTTACCA+TGG | - | chr6_1:98289479-98289498 | Msa0901550:intron | 15.0% |
| !! | TGTAGATATTAAATAATTTC+AGG | + | chr6_1:98289534-98289553 | None:intergenic | 15.0% |
| !! | ATAGTATTAATACCAAATTT+GGG | + | chr6_1:98289689-98289708 | None:intergenic | 15.0% |
| !! | TATAGTATTAATACCAAATT+TGG | + | chr6_1:98289690-98289709 | None:intergenic | 15.0% |
| !! | TTTGGTATTAATACTATATT+AGG | - | chr6_1:98289692-98289711 | Msa0901550:intron | 15.0% |
| !! | AAACAACTAAAAAATGAATT+TGG | - | chr6_1:98290511-98290530 | Msa0901550:intron | 15.0% |
| !! | TAATTTACTCATTGAAAAAA+GGG | + | chr6_1:98291085-98291104 | None:intergenic | 15.0% |
| !! | TATTATTTAATAAGAAATGG+TGG | - | chr6_1:98291614-98291633 | Msa0901550:intron | 15.0% |
| !! | AAAAAAATTAAAAGTGGTTA+GGG | + | chr6_1:98291909-98291928 | None:intergenic | 15.0% |
| !! | AAAAAAAATTAAAAGTGGTT+AGG | + | chr6_1:98291910-98291929 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTGACAAAGATA+TGG | - | chr6_1:98291978-98291997 | Msa0901550:intron | 15.0% |
| !! | AAGTAATTGATATTATGAAA+GGG | - | chr6_1:98292443-98292462 | Msa0901550:CDS | 15.0% |
| !!! | ATATTAGAAGCTTTAATAAT+AGG | - | chr6_1:98292498-98292517 | Msa0901550:CDS | 15.0% |
| !! | CTGAAAAATATTGAATTAAA+TGG | - | chr6_1:98292978-98292997 | Msa0901550:CDS | 15.0% |
| !! | CAAAATAAACATATACAATA+TGG | + | chr6_1:98293798-98293817 | None:intergenic | 15.0% |
| !! | TTCATAATTATCAACAATCA+TGG | + | chr6_1:98284474-98284493 | None:intergenic | 20.0% |
| !! | AGTATCACAAAAAATTATGT+TGG | - | chr6_1:98284920-98284939 | Msa0901550:intron | 20.0% |
| !! | AGTATCATAAAAAATGATGT+TGG | - | chr6_1:98285154-98285173 | Msa0901550:CDS | 20.0% |
| !! | AGTATCACAAAAAATGATAT+TGG | - | chr6_1:98285509-98285528 | Msa0901550:intron | 20.0% |
| !! | AATAACCAGCAATTAAAAAT+AGG | + | chr6_1:98286760-98286779 | None:intergenic | 20.0% |
| !! | CAAAGACTTTCATAAATTAA+GGG | + | chr6_1:98286785-98286804 | None:intergenic | 20.0% |
| !!! | CAACTTTGATTTTTTCATTT+GGG | + | chr6_1:98287367-98287386 | None:intergenic | 20.0% |
| !! | TAAAAAAGGTCGAAATTATT+AGG | + | chr6_1:98287411-98287430 | None:intergenic | 20.0% |
| !!! | CTTTTGTGCTAAATAAATAA+GGG | - | chr6_1:98287476-98287495 | Msa0901550:intron | 20.0% |
| !!! | TGATAACTTTTTTTTAGAGA+AGG | - | chr6_1:98287502-98287521 | Msa0901550:intron | 20.0% |
| !!! | GATAACTTTTTTTTAGAGAA+GGG | - | chr6_1:98287503-98287522 | Msa0901550:intron | 20.0% |
| !!! | ATTGTTTGCATATTTTGTTT+TGG | - | chr6_1:98288303-98288322 | Msa0901550:intron | 20.0% |
| !!! | ATACAGTTTTGAATGATATA+TGG | - | chr6_1:98288434-98288453 | Msa0901550:intron | 20.0% |
| !!! | TACAGTTTTGAATGATATAT+GGG | - | chr6_1:98288435-98288454 | Msa0901550:intron | 20.0% |
| !! | TGGATTTGACTATAAATTTA+AGG | + | chr6_1:98288648-98288667 | None:intergenic | 20.0% |
| !! | ATGTAAATTGATCTATGTTT+GGG | + | chr6_1:98288686-98288705 | None:intergenic | 20.0% |
| !! | AATGTAAATTGATCTATGTT+TGG | + | chr6_1:98288687-98288706 | None:intergenic | 20.0% |
| !! | AGCTAAAAGTTACAAATTTA+AGG | + | chr6_1:98288721-98288740 | None:intergenic | 20.0% |
| !! | ATGTAAATTGATCTATGTTT+GGG | + | chr6_1:98288686-98288705 | None:intergenic | 20.0% |
| !! | AATGTAAATTGATCTATGTT+TGG | + | chr6_1:98288687-98288706 | None:intergenic | 20.0% |
| !! | AGCTAAAAGTTACAAATTTA+AGG | + | chr6_1:98288721-98288740 | None:intergenic | 20.0% |
| !! | TGGATTTGACTATAAATTTA+AGG | + | chr6_1:98288648-98288667 | None:intergenic | 20.0% |
| !! | ATGTAAATTGATCTATGTTT+GGG | + | chr6_1:98288686-98288705 | None:intergenic | 20.0% |
| !! | AATGTAAATTGATCTATGTT+TGG | + | chr6_1:98288687-98288706 | None:intergenic | 20.0% |
| !! | AGCTAAAAGTTACAAATTTA+AGG | + | chr6_1:98288721-98288740 | None:intergenic | 20.0% |
| !! | TGCATTGAATTAATAGATAT+AGG | + | chr6_1:98289234-98289253 | None:intergenic | 20.0% |
| !! | ATAGAGAAATAAATAGTATG+AGG | + | chr6_1:98289323-98289342 | None:intergenic | 20.0% |
| !! | GATATTAAACAAAATAAGCA+TGG | + | chr6_1:98289434-98289453 | None:intergenic | 20.0% |
| !! | TAGTATTAATACCAAATTTG+GGG | + | chr6_1:98289688-98289707 | None:intergenic | 20.0% |
| !! | ATATTACACAAACTATTATG+TGG | + | chr6_1:98289837-98289856 | None:intergenic | 20.0% |
| !! | ATATATGTGTTGCAAATATT+TGG | - | chr6_1:98289873-98289892 | Msa0901550:intron | 20.0% |
| !!! | TTAGTATTTTTGTTGTTGTA+TGG | - | chr6_1:98289979-98289998 | Msa0901550:intron | 20.0% |
| !! | TAAATATACTATTGCCATTA+TGG | + | chr6_1:98290016-98290035 | None:intergenic | 20.0% |
| !!! | ATTTATTTTCTTTTGACTGT+TGG | - | chr6_1:98290083-98290102 | Msa0901550:intron | 20.0% |
| !!! | TTTATTTTCTTTTGACTGTT+GGG | - | chr6_1:98290084-98290103 | Msa0901550:intron | 20.0% |
| !!! | TTGAAGTTTTAGTAAAACAA+TGG | + | chr6_1:98290358-98290377 | None:intergenic | 20.0% |
| !! | TAAACATATTTATTATGCCT+TGG | - | chr6_1:98290398-98290417 | Msa0901550:intron | 20.0% |
| !!! | TTATTTTGAAAAGAATTCCA+AGG | + | chr6_1:98290418-98290437 | None:intergenic | 20.0% |
| !!! | AAAAAATGAATTTGGTAATG+AGG | - | chr6_1:98290519-98290538 | Msa0901550:intron | 20.0% |
| !!! | AAAAATGAATTTGGTAATGA+GGG | - | chr6_1:98290520-98290539 | Msa0901550:intron | 20.0% |
| !! | TAAGAAATTTAGTGTATGTT+TGG | - | chr6_1:98290705-98290724 | Msa0901550:intron | 20.0% |
| !! | CTAATTTACTCATTGAAAAA+AGG | + | chr6_1:98291086-98291105 | None:intergenic | 20.0% |
| !!! | AAAAAAGTTTTATGCATTAG+TGG | - | chr6_1:98291185-98291204 | Msa0901550:intron | 20.0% |
| !!! | AAAAAGTTTTATGCATTAGT+GGG | - | chr6_1:98291186-98291205 | Msa0901550:intron | 20.0% |
| !! | TATATTAACATACAAGTGAA+TGG | - | chr6_1:98291392-98291411 | Msa0901550:intron | 20.0% |
| !! | GAATTGATGAAAAATGTATT+TGG | + | chr6_1:98291435-98291454 | None:intergenic | 20.0% |
| !! | TTGACCTTATTCATTATATA+TGG | - | chr6_1:98291745-98291764 | Msa0901550:CDS | 20.0% |
| !! | TGACCTTATTCATTATATAT+GGG | - | chr6_1:98291746-98291765 | Msa0901550:CDS | 20.0% |
| !! | TATTAACTAGTCATAGTTAT+TGG | + | chr6_1:98292346-98292365 | None:intergenic | 20.0% |
| !! | GAAGTAATTGATATTATGAA+AGG | - | chr6_1:98292442-98292461 | Msa0901550:CDS | 20.0% |
| !!! | TGTTAATGCTTAACATTTTT+AGG | - | chr6_1:98292737-98292756 | Msa0901550:CDS | 20.0% |
| !!! | TTTCAGCTAAGTAATTTTTT+GGG | - | chr6_1:98292839-98292858 | Msa0901550:CDS | 20.0% |
| !! | AAAATCAACTTATAGTTGTT+GGG | + | chr6_1:98292907-98292926 | None:intergenic | 20.0% |
| !! | AAAAATCAACTTATAGTTGT+TGG | + | chr6_1:98292908-98292927 | None:intergenic | 20.0% |
| !!! | TTTCACTGTAGATTTTTATT+TGG | - | chr6_1:98293070-98293089 | Msa0901550:CDS | 20.0% |
| !!! | GGTTTTTAGATCTAAAAATA+CGG | - | chr6_1:98293091-98293110 | Msa0901550:CDS | 20.0% |
| !!! | TATTGTTTTCAGATTCTTAT+TGG | - | chr6_1:98293316-98293335 | Msa0901550:CDS | 20.0% |
| !!! | TTTTCCAATTGTTTATAGAT+GGG | - | chr6_1:98293657-98293676 | Msa0901550:CDS | 20.0% |
| !! | ATAATATGTATCTCAAATCA+TGG | + | chr6_1:98293827-98293846 | None:intergenic | 20.0% |
| !! | TTAATTAAGAGCTAAGTTAT+AGG | - | chr6_1:98293877-98293896 | Msa0901550:intron | 20.0% |
| ! | AGAAAAATACTCCAAAGTTA+TGG | - | chr6_1:98284242-98284261 | Msa0901550:CDS | 25.0% |
| !!! | TTTCATGAGATCATTTTTCA+AGG | - | chr6_1:98284311-98284330 | Msa0901550:CDS | 25.0% |
| !!! | TTCATGAGATCATTTTTCAA+GGG | - | chr6_1:98284312-98284331 | Msa0901550:CDS | 25.0% |
| ! | AACATTTACTATGTTCTGTT+AGG | + | chr6_1:98284541-98284560 | None:intergenic | 25.0% |
| !! | AATACTATTTGTTGAACAGA+TGG | - | chr6_1:98284702-98284721 | Msa0901550:intron | 25.0% |
| ! | AGCATTTGAAGAATATCATT+GGG | + | chr6_1:98284817-98284836 | None:intergenic | 25.0% |
| ! | CAGATGAAGTAGAAAAAAAT+AGG | - | chr6_1:98284881-98284900 | Msa0901550:intron | 25.0% |
| ! | AAAAAATTATGTTGGTACGT+TGG | - | chr6_1:98284928-98284947 | Msa0901550:intron | 25.0% |
| ! | AGTATCACAAAAATTGTTGT+CGG | - | chr6_1:98285037-98285056 | Msa0901550:CDS | 25.0% |
| !! | AAAAAATGATGTTGGTAAGT+CGG | - | chr6_1:98285162-98285181 | Msa0901550:CDS | 25.0% |
| ! | AGTATCACAAAAAATGATGT+TGG | - | chr6_1:98285271-98285290 | Msa0901550:CDS | 25.0% |
| ! | AGTATCATAAAAAATGGTGT+TGG | - | chr6_1:98285392-98285411 | Msa0901550:intron | 25.0% |
| ! | TTCTTATTCCTTTATGTTCA+TGG | + | chr6_1:98285805-98285824 | None:intergenic | 25.0% |
| ! | TTGAAAATGCAAACAAAAGT+TGG | - | chr6_1:98286485-98286504 | Msa0901550:intron | 25.0% |
| !! | TTTTTAACCCTTAAAGCAAA+GGG | - | chr6_1:98286711-98286730 | Msa0901550:intron | 25.0% |
| !!! | GATTTCCTATTTTTAATTGC+TGG | - | chr6_1:98286752-98286771 | Msa0901550:intron | 25.0% |
| ! | GCAAAGACTTTCATAAATTA+AGG | + | chr6_1:98286786-98286805 | None:intergenic | 25.0% |
| !!! | CTTTTAAGGAAAATCTTATG+AGG | - | chr6_1:98286854-98286873 | Msa0901550:intron | 25.0% |
| ! | AAAAAATAGACAGACAAACA+CGG | - | chr6_1:98287257-98287276 | Msa0901550:intron | 25.0% |
| !!! | CCAACTTTGATTTTTTCATT+TGG | + | chr6_1:98287368-98287387 | None:intergenic | 25.0% |
| ! | CCAAATGAAAAAATCAAAGT+TGG | - | chr6_1:98287365-98287384 | Msa0901550:intron | 25.0% |
| ! | AAAAAATCAAAGTTGGAATG+CGG | - | chr6_1:98287372-98287391 | Msa0901550:intron | 25.0% |
| !! | CCTTATTTATTTAGCACAAA+AGG | + | chr6_1:98287478-98287497 | None:intergenic | 25.0% |
| !! | CCTTTTGTGCTAAATAAATA+AGG | - | chr6_1:98287475-98287494 | Msa0901550:intron | 25.0% |
| !!! | GAGCAATAATTTTTTTCTTG+AGG | + | chr6_1:98287612-98287631 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTTTTTTGAGTGG+AGG | + | chr6_1:98287645-98287664 | None:intergenic | 25.0% |
| !!! | ATTGCTAATTTTGATTTTGG+TGG | - | chr6_1:98287754-98287773 | Msa0901550:intron | 25.0% |
| !!! | CATCCTCTAGAATAATAAAT+TGG | - | chr6_1:98287967-98287986 | Msa0901550:intron | 25.0% |
| ! | ATGCCAATTTATTATTCTAG+AGG | + | chr6_1:98287973-98287992 | None:intergenic | 25.0% |
| ! | AATAAAAGACAAACAAACCT+AGG | - | chr6_1:98288067-98288086 | Msa0901550:intron | 25.0% |
| !! | ATTCCATGTTTGATATGTTT+TGG | - | chr6_1:98288377-98288396 | Msa0901550:intron | 25.0% |
| !! | TTTTGAATGATATATGGGTT+AGG | - | chr6_1:98288440-98288459 | Msa0901550:intron | 25.0% |
| !! | TTTGAATGATATATGGGTTA+GGG | - | chr6_1:98288441-98288460 | Msa0901550:intron | 25.0% |
| !! | ACGTTTCTTCTAATTTTTGA+AGG | - | chr6_1:98288482-98288501 | Msa0901550:intron | 25.0% |
| !! | CGTTTCTTCTAATTTTTGAA+GGG | - | chr6_1:98288483-98288502 | Msa0901550:intron | 25.0% |
| ! | TGGATTTGACTATAAAGTTA+AGG | + | chr6_1:98288866-98288885 | None:intergenic | 25.0% |
| ! | ATGTAAAATGGAGTAAATGA+TGG | + | chr6_1:98289392-98289411 | None:intergenic | 25.0% |
| !! | ATTTACTCCATTTTACATGT+AGG | - | chr6_1:98289394-98289413 | Msa0901550:intron | 25.0% |
| ! | TGGAACATTATATCAAACAA+TGG | + | chr6_1:98289622-98289641 | None:intergenic | 25.0% |
| ! | AGTATTAATACCAAATTTGG+GGG | + | chr6_1:98289687-98289706 | None:intergenic | 25.0% |
| !!! | TGGTTTTTTTGTTACCATAA+TGG | - | chr6_1:98289999-98290018 | Msa0901550:intron | 25.0% |
| ! | AATCATATGAGATCATAAGA+AGG | + | chr6_1:98290045-98290064 | None:intergenic | 25.0% |
| ! | TTTGACTGATTGTTATGTTT+AGG | - | chr6_1:98290145-98290164 | Msa0901550:intron | 25.0% |
| ! | TGACAACATGTAACAATTAT+CGG | + | chr6_1:98290474-98290493 | None:intergenic | 25.0% |
| ! | TCAATTATTATCTCGTAAGT+TGG | - | chr6_1:98290578-98290597 | Msa0901550:intron | 25.0% |
| ! | TTTGGTAAACTTGAAAAACA+CGG | - | chr6_1:98290723-98290742 | Msa0901550:intron | 25.0% |
| !!! | AAAAGTTTTATGCATTAGTG+GGG | - | chr6_1:98291187-98291206 | Msa0901550:intron | 25.0% |
| !!! | ATTTACCTTATTTTGCAAGA+CGG | + | chr6_1:98291494-98291513 | None:intergenic | 25.0% |
| ! | TATTTGTTTGCATATATCGA+TGG | + | chr6_1:98291592-98291611 | None:intergenic | 25.0% |
| ! | TTTCTCTAGATATGGAATAT+TGG | - | chr6_1:98291955-98291974 | Msa0901550:intron | 25.0% |
| ! | ATTTCACCATTACTAATATG+AGG | - | chr6_1:98292036-98292055 | Msa0901550:intron | 25.0% |
| ! | AGGTCTCTATTAATATTGAA+AGG | - | chr6_1:98292056-98292075 | Msa0901550:intron | 25.0% |
| ! | ACTTATCAGACAAATGTATT+TGG | - | chr6_1:98292155-98292174 | Msa0901550:CDS | 25.0% |
| !! | ATATTTTCTCTGTCTTTACA+TGG | + | chr6_1:98292230-98292249 | None:intergenic | 25.0% |
| ! | TAACGAAAAAAAGTAGACAA+CGG | - | chr6_1:98292527-98292546 | Msa0901550:CDS | 25.0% |
| !!! | GTTTCAGCTAAGTAATTTTT+TGG | - | chr6_1:98292838-98292857 | Msa0901550:CDS | 25.0% |
| !!! | TTCAGCTAAGTAATTTTTTG+GGG | - | chr6_1:98292840-98292859 | Msa0901550:CDS | 25.0% |
| ! | TGTGAAGAATGTAAAATTGT+CGG | + | chr6_1:98293015-98293034 | None:intergenic | 25.0% |
| !! | ACAATTTTACATTCTTCACA+CGG | - | chr6_1:98293015-98293034 | Msa0901550:CDS | 25.0% |
| !! | GTTTTCCAATTGTTTATAGA+TGG | - | chr6_1:98293656-98293675 | Msa0901550:CDS | 25.0% |
| ! | AAACATATACAATATGGTCA+AGG | + | chr6_1:98293792-98293811 | None:intergenic | 25.0% |
| !! | TATGAAGTAAGTATTTTCTC+TGG | - | chr6_1:98293932-98293951 | Msa0901550:CDS | 25.0% |
| ! | TAAAATTTGTGGAGTGAATT+TGG | - | chr6_1:98294478-98294497 | Msa0901550:CDS | 25.0% |
| GTTCCCAATTGTTTATAGAT+GGG | - | chr6_1:98284334-98284353 | Msa0901550:CDS | 30.0% | |
| TTCAGTTGAACATGTATTGA+TGG | - | chr6_1:98284418-98284437 | Msa0901550:CDS | 30.0% | |
| !! | GTGATATTAATCTAGCTTTC+TGG | + | chr6_1:98284446-98284465 | None:intergenic | 30.0% |
| TGATATCAAGTCTTGCATTT+AGG | - | chr6_1:98284609-98284628 | Msa0901550:intron | 30.0% | |
| GATATCAAGTCTTGCATTTA+GGG | - | chr6_1:98284610-98284629 | Msa0901550:intron | 30.0% | |
| TAGAGACATTTGATTATGCA+TGG | - | chr6_1:98284764-98284783 | Msa0901550:intron | 30.0% | |
| GCATGGAACAAAGTTAATAA+CGG | - | chr6_1:98284781-98284800 | Msa0901550:intron | 30.0% | |
| GAGCATTTGAAGAATATCAT+TGG | + | chr6_1:98284818-98284837 | None:intergenic | 30.0% | |
| ! | TTCTACTTCATCTGATTTGT+CGG | + | chr6_1:98284875-98284894 | None:intergenic | 30.0% |
| !! | GACGAGAGTATCATAAAAAA+TGG | - | chr6_1:98285386-98285405 | Msa0901550:intron | 30.0% |
| AGTATCGCAAAAAATGATGT+TGG | - | chr6_1:98285626-98285645 | Msa0901550:intron | 30.0% | |
| AAAAAATGATGTTGGTACGT+CGG | - | chr6_1:98285634-98285653 | Msa0901550:intron | 30.0% | |
| CAAGATTTCTGATTTAGACT+TGG | + | chr6_1:98285861-98285880 | None:intergenic | 30.0% | |
| CAAGTCTAAATCAGAAATCT+TGG | - | chr6_1:98285859-98285878 | Msa0901550:intron | 30.0% | |
| AGTATCACCAAAAATGATGT+TGG | - | chr6_1:98285902-98285921 | Msa0901550:intron | 30.0% | |
| ! | CGTCTCCTTTAAAAAAGAAA+GGG | - | chr6_1:98285975-98285994 | Msa0901550:intron | 30.0% |
| !!! | CTCTTCCCTTTCTTTTTTAA+AGG | + | chr6_1:98285983-98286002 | None:intergenic | 30.0% |
| ! | CAACCTTTATGAAGATTTTG+AGG | - | chr6_1:98286114-98286133 | Msa0901550:intron | 30.0% |
| TTGCCTCAAAATCTTCATAA+AGG | + | chr6_1:98286120-98286139 | None:intergenic | 30.0% | |
| ACTAGCATCATGAAACATAT+TGG | + | chr6_1:98286161-98286180 | None:intergenic | 30.0% | |
| GTGGAGCTTAATAACAATTA+CGG | - | chr6_1:98286400-98286419 | Msa0901550:intron | 30.0% | |
| ! | CCATTACAAAAGCATAATCA+CGG | + | chr6_1:98286623-98286642 | None:intergenic | 30.0% |
| TGTCAGTTAAACTCTTGTAA+TGG | - | chr6_1:98286660-98286679 | Msa0901550:intron | 30.0% | |
| ! | GTTTTTAACCCTTAAAGCAA+AGG | - | chr6_1:98286710-98286729 | Msa0901550:intron | 30.0% |
| TATGAAAGTCTTTGCATACA+TGG | - | chr6_1:98286791-98286810 | Msa0901550:intron | 30.0% | |
| ATGAAAGTCTTTGCATACAT+GGG | - | chr6_1:98286792-98286811 | Msa0901550:intron | 30.0% | |
| ATAATGATACTTCCCTTCAT+AGG | - | chr6_1:98286904-98286923 | Msa0901550:intron | 30.0% | |
| TAATGATACTTCCCTTCATA+GGG | - | chr6_1:98286905-98286924 | Msa0901550:intron | 30.0% | |
| ! | CATAAGATTTTCCCTATGAA+GGG | + | chr6_1:98286919-98286938 | None:intergenic | 30.0% |
| ! | TCATAAGATTTTCCCTATGA+AGG | + | chr6_1:98286920-98286939 | None:intergenic | 30.0% |
| AACGATTATGAGGGTAAAAA+AGG | + | chr6_1:98287425-98287444 | None:intergenic | 30.0% | |
| TCGGTTCTCATAGTAAAAAT+AGG | + | chr6_1:98287863-98287882 | None:intergenic | 30.0% | |
| !! | ACATTTTAAGGAACTTGAAG+TGG | + | chr6_1:98288015-98288034 | None:intergenic | 30.0% |
| !! | TTTTGTTGTATGTGAATCCT+AGG | + | chr6_1:98288087-98288106 | None:intergenic | 30.0% |
| GATTCACATACAACAAAATC+TGG | - | chr6_1:98288089-98288108 | Msa0901550:intron | 30.0% | |
| AATTGTCTTCCTGAAATTCT+TGG | + | chr6_1:98288166-98288185 | None:intergenic | 30.0% | |
| TCACCAAAACATATCAAACA+TGG | + | chr6_1:98288383-98288402 | None:intergenic | 30.0% | |
| ATCATTCAAAACTGTATGCA+TGG | + | chr6_1:98288431-98288450 | None:intergenic | 30.0% | |
| TTACAAATTATAGCGTCAAG+TGG | + | chr6_1:98289034-98289053 | None:intergenic | 30.0% | |
| !! | TTCTACACTTGATTTTGAGT+TGG | - | chr6_1:98288740-98288759 | Msa0901550:intron | 30.0% |
| AAAATAAGCATGGATGAGAT+TGG | + | chr6_1:98289424-98289443 | None:intergenic | 30.0% | |
| TTGATATAATGTTCCAGACA+AGG | - | chr6_1:98289626-98289645 | Msa0901550:intron | 30.0% | |
| TGATATAATGTTCCAGACAA+GGG | - | chr6_1:98289627-98289646 | Msa0901550:intron | 30.0% | |
| GTATTAATACCAAATTTGGG+GGG | + | chr6_1:98289686-98289705 | None:intergenic | 30.0% | |
| ATCTTGACTAAATATGTTGG+GGG | + | chr6_1:98289901-98289920 | None:intergenic | 30.0% | |
| GATCTTGACTAAATATGTTG+GGG | + | chr6_1:98289902-98289921 | None:intergenic | 30.0% | |
| GGATCTTGACTAAATATGTT+GGG | + | chr6_1:98289903-98289922 | None:intergenic | 30.0% | |
| !!! | TTGAGGTTGAGGTTTTATTT+AGG | - | chr6_1:98289945-98289964 | Msa0901550:intron | 30.0% |
| !!! | TGAGGTTTTATTTAGGTTGT+TGG | - | chr6_1:98289952-98289971 | Msa0901550:intron | 30.0% |
| ATATGAGATCATAAGAAGGA+AGG | + | chr6_1:98290041-98290060 | None:intergenic | 30.0% | |
| GACAACATGTAACAATTATC+GGG | + | chr6_1:98290473-98290492 | None:intergenic | 30.0% | |
| !! | TATTTGTTTTCACGTATGTG+TGG | + | chr6_1:98290815-98290834 | None:intergenic | 30.0% |
| TTCAAATCTAATTCACTCAC+TGG | + | chr6_1:98291007-98291026 | None:intergenic | 30.0% | |
| GATAATGTATGTGTATTGCT+TGG | - | chr6_1:98291343-98291362 | Msa0901550:intron | 30.0% | |
| AAATGTTATGTTTCCTTACC+AGG | + | chr6_1:98291372-98291391 | None:intergenic | 30.0% | |
| GCTCCCATATATAATGAATA+AGG | + | chr6_1:98291752-98291771 | None:intergenic | 30.0% | |
| TGTAAGCATTTCTCTAGATA+TGG | - | chr6_1:98291947-98291966 | Msa0901550:intron | 30.0% | |
| TTGACAAAGATATGGAGTAT+TGG | - | chr6_1:98291986-98292005 | Msa0901550:intron | 30.0% | |
| TAGAGACCTCATATTAGTAA+TGG | + | chr6_1:98292045-98292064 | None:intergenic | 30.0% | |
| ! | GAAAGGTCAAATGTCTTTTA+AGG | - | chr6_1:98292073-98292092 | Msa0901550:intron | 30.0% |
| !!! | ATGCAACATTTTCAAGTTTC+AGG | + | chr6_1:98292303-98292322 | None:intergenic | 30.0% |
| ATAGTTATTGGTGTAAGCTT+GGG | + | chr6_1:98292334-98292353 | None:intergenic | 30.0% | |
| ATCCATCATCATAATACACT+TGG | - | chr6_1:98292403-98292422 | Msa0901550:CDS | 30.0% | |
| !!! | GATATTATGAAAGGGCATTT+TGG | - | chr6_1:98292451-98292470 | Msa0901550:CDS | 30.0% |
| CATGCATGTATGTATGTATT+CGG | + | chr6_1:98293176-98293195 | None:intergenic | 30.0% | |
| ! | TAGGAAAAGCTGATAATGTA+AGG | - | chr6_1:98293521-98293540 | Msa0901550:CDS | 30.0% |
| CTTCATTTCTACCATAACAT+TGG | + | chr6_1:98293555-98293574 | None:intergenic | 30.0% | |
| ATTTGAATCTTCTCACCAAA+AGG | - | chr6_1:98293600-98293619 | Msa0901550:CDS | 30.0% | |
| TTTGAATCTTCTCACCAAAA+GGG | - | chr6_1:98293601-98293620 | Msa0901550:CDS | 30.0% | |
| TTTCATGAGATCTTTCTTCA+AGG | - | chr6_1:98293634-98293653 | Msa0901550:CDS | 30.0% | |
| AATGCATAGAATGTACTTAC+AGG | + | chr6_1:98293685-98293704 | None:intergenic | 30.0% | |
| !! | TCAACTTGTTAAGATCAAGA+TGG | - | chr6_1:98293719-98293738 | Msa0901550:intron | 30.0% |
| TAAGAGCTAAGTTATAGGTT+TGG | - | chr6_1:98293882-98293901 | Msa0901550:intron | 30.0% | |
| TGAGTACATTTGATTATGCT+TGG | - | chr6_1:98294171-98294190 | Msa0901550:intron | 30.0% | |
| GCTTGGAACACAATTAATAA+CGG | - | chr6_1:98294188-98294207 | Msa0901550:intron | 30.0% | |
| ATGCTCAACAAAATATCTTC+CGG | - | chr6_1:98294239-98294258 | Msa0901550:intron | 30.0% | |
| GGCAACATACTTGATTTAAT+TGG | + | chr6_1:98294329-98294348 | None:intergenic | 30.0% | |
| !! | TCGGATTTGTTATCTTTCAT+AGG | + | chr6_1:98294350-98294369 | None:intergenic | 30.0% |
| GTTGTATCTTGAACTATCTT+AGG | + | chr6_1:98294434-98294453 | None:intergenic | 30.0% | |
| ! | AATTTTACCACTCTTCTCAA+CGG | + | chr6_1:98294465-98294484 | None:intergenic | 30.0% |
| GGTTCCCAATTGTTTATAGA+TGG | - | chr6_1:98284333-98284352 | Msa0901550:CDS | 35.0% | |
| CAGCCCATCTATAAACAATT+GGG | + | chr6_1:98284340-98284359 | None:intergenic | 35.0% | |
| ATGTTCTGTTAGGTACGTAA+TGG | + | chr6_1:98284531-98284550 | None:intergenic | 35.0% | |
| TACTTTACAAGCTTCACCAT+CGG | + | chr6_1:98284731-98284750 | None:intergenic | 35.0% | |
| AAATTATGTTGGTACGTTGG+AGG | - | chr6_1:98284931-98284950 | Msa0901550:intron | 35.0% | |
| AAAAATTGTTGTCGGTACGT+CGG | - | chr6_1:98285045-98285064 | Msa0901550:CDS | 35.0% | |
| ATTTAACATCTGTGAGCTGA+TGG | + | chr6_1:98285213-98285232 | None:intergenic | 35.0% | |
| AAATGATGTTGGTATGTCAG+TGG | - | chr6_1:98285282-98285301 | Msa0901550:CDS | 35.0% | |
| AAATGATATTGGTACGTCAG+AGG | - | chr6_1:98285520-98285539 | Msa0901550:intron | 35.0% | |
| ! | CGTCTCCTTTAAAGAAGAAA+GGG | - | chr6_1:98285699-98285718 | Msa0901550:intron | 35.0% |
| CTCTTCCCTTTCTTCTTTAA+AGG | + | chr6_1:98285707-98285726 | None:intergenic | 35.0% | |
| AAGAAAGGGAAGAGTGATAA+AGG | - | chr6_1:98285713-98285732 | Msa0901550:intron | 35.0% | |
| ! | CTTACTCTTTTCTCAACTAG+TGG | + | chr6_1:98285779-98285798 | None:intergenic | 35.0% |
| TCTAAATCAGAAATCTTGGC+TGG | - | chr6_1:98285863-98285882 | Msa0901550:intron | 35.0% | |
| CTAAATCAGAAATCTTGGCT+GGG | - | chr6_1:98285864-98285883 | Msa0901550:intron | 35.0% | |
| !!! | CATCATTTTTGGTGATACTC+TGG | + | chr6_1:98285901-98285920 | None:intergenic | 35.0% |
| ! | AGACGTACCAACATCATTTT+TGG | + | chr6_1:98285912-98285931 | None:intergenic | 35.0% |
| ! | GCGTCTCCTTTAAAAAAGAA+AGG | - | chr6_1:98285974-98285993 | Msa0901550:intron | 35.0% |
| AAGAAAGGGAAGAGTGATAA+AGG | - | chr6_1:98285713-98285732 | Msa0901550:intron | 35.0% | |
| !!! | ATGAAGATTTTGAGGCAACA+AGG | - | chr6_1:98286122-98286141 | Msa0901550:intron | 35.0% |
| CTGTAAAATCGAATGCAGAT+AGG | - | chr6_1:98286236-98286255 | Msa0901550:intron | 35.0% | |
| !! | TAACAATTACGGTGCCATAA+AGG | - | chr6_1:98286411-98286430 | Msa0901550:intron | 35.0% |
| !! | AACAATTACGGTGCCATAAA+GGG | - | chr6_1:98286412-98286431 | Msa0901550:intron | 35.0% |
| ! | AAGATTACCGAGTTGAAAGA+GGG | - | chr6_1:98286460-98286479 | Msa0901550:intron | 35.0% |
| AAATGCAAACAAAAGTTGGC+TGG | - | chr6_1:98286489-98286508 | Msa0901550:intron | 35.0% | |
| AATGCAAACAAAAGTTGGCT+GGG | - | chr6_1:98286490-98286509 | Msa0901550:intron | 35.0% | |
| TGTCGTCATTCAAGATTGTT+CGG | - | chr6_1:98286576-98286595 | Msa0901550:intron | 35.0% | |
| ! | CCGTGATTATGCTTTTGTAA+TGG | - | chr6_1:98286620-98286639 | Msa0901550:intron | 35.0% |
| AGGAAATCCCTTTGCTTTAA+GGG | + | chr6_1:98286721-98286740 | None:intergenic | 35.0% | |
| AAGGAAATCCCTTTGCTTTA+AGG | + | chr6_1:98286722-98286741 | None:intergenic | 35.0% | |
| TGAAATTGCTTCCCTTCAAA+AGG | - | chr6_1:98286937-98286956 | Msa0901550:intron | 35.0% | |
| GAAATTGCTTCCCTTCAAAA+GGG | - | chr6_1:98286938-98286957 | Msa0901550:intron | 35.0% | |
| ! | AGTAAGACTTCCCTTTTGAA+GGG | + | chr6_1:98286951-98286970 | None:intergenic | 35.0% |
| TGTAAAACTTCCCCTTTGAA+GGG | + | chr6_1:98287013-98287032 | None:intergenic | 35.0% | |
| ATGTAAAACTTCCCCTTTGA+AGG | + | chr6_1:98287014-98287033 | None:intergenic | 35.0% | |
| ! | ACATGTTGCTTACCTTCATA+AGG | - | chr6_1:98287030-98287049 | Msa0901550:intron | 35.0% |
| ! | CATGTTGCTTACCTTCATAA+GGG | - | chr6_1:98287031-98287050 | Msa0901550:intron | 35.0% |
| ! | CGTAAGACTTCTTTTGTGAA+TGG | + | chr6_1:98287075-98287094 | None:intergenic | 35.0% |
| TTCACAAAAGAAGTCTTACG+AGG | - | chr6_1:98287075-98287094 | Msa0901550:intron | 35.0% | |
| TCACTTGTGAACGATTATGA+GGG | + | chr6_1:98287434-98287453 | None:intergenic | 35.0% | |
| !!! | TTTCTTTTTTGAGTGGAGGT+GGG | + | chr6_1:98287641-98287660 | None:intergenic | 35.0% |
| !!! | TTTTCTTTTTTGAGTGGAGG+TGG | + | chr6_1:98287642-98287661 | None:intergenic | 35.0% |
| TCACATACAACAAAATCTGG+AGG | - | chr6_1:98288092-98288111 | Msa0901550:intron | 35.0% | |
| AAGCAAGGAACAAAAGACTT+GGG | + | chr6_1:98288355-98288374 | None:intergenic | 35.0% | |
| AAAGCAAGGAACAAAAGACT+TGG | + | chr6_1:98288356-98288375 | None:intergenic | 35.0% | |
| TCAAACATGGAATGAAAGCA+AGG | + | chr6_1:98288370-98288389 | None:intergenic | 35.0% | |
| TTGGGTGTATTGTGTAAAAG+TGG | + | chr6_1:98288668-98288687 | None:intergenic | 35.0% | |
| TTGGGTGTATTGTGTAAAAG+TGG | + | chr6_1:98288668-98288687 | None:intergenic | 35.0% | |
| TTGGGTGTATTGTGTAAAAG+TGG | + | chr6_1:98288668-98288687 | None:intergenic | 35.0% | |
| TGATGAAGTGAAAACAACCA+TGG | + | chr6_1:98289499-98289518 | None:intergenic | 35.0% | |
| GATATAATGTTCCAGACAAG+GGG | - | chr6_1:98289628-98289647 | Msa0901550:intron | 35.0% | |
| ATATAATGTTCCAGACAAGG+GGG | - | chr6_1:98289629-98289648 | Msa0901550:intron | 35.0% | |
| ! | TAATTTTGCTTGTGTCACAG+TGG | - | chr6_1:98289728-98289747 | Msa0901550:intron | 35.0% |
| !!! | TGAAGGCATTTTGCACTAAA+AGG | - | chr6_1:98289755-98289774 | Msa0901550:intron | 35.0% |
| TGTACTCAAATACCAACTCA+TGG | + | chr6_1:98289801-98289820 | None:intergenic | 35.0% | |
| ACACAAACTATTATGTGGTG+TGG | + | chr6_1:98289832-98289851 | None:intergenic | 35.0% | |
| CGGATCTTGACTAAATATGT+TGG | + | chr6_1:98289904-98289923 | None:intergenic | 35.0% | |
| !! | TTTTCTTTTGACTGTTGGGA+CGG | - | chr6_1:98290088-98290107 | Msa0901550:intron | 35.0% |
| ! | CAGATCAACGATTTTCCATT+TGG | + | chr6_1:98290255-98290274 | None:intergenic | 35.0% |
| GTAAACTTGAAAAACACGGT+AGG | - | chr6_1:98290727-98290746 | Msa0901550:intron | 35.0% | |
| CTAATTCACTCACTGGAAAA+TGG | + | chr6_1:98291000-98291019 | None:intergenic | 35.0% | |
| ATGGTGGTCAACAAAATCAA+TGG | - | chr6_1:98291630-98291649 | Msa0901550:CDS | 35.0% | |
| TTAATACAATTGTGTCCCCT+AGG | - | chr6_1:98291688-98291707 | Msa0901550:CDS | 35.0% | |
| ACAATGTATTGAGTCCATGA+AGG | - | chr6_1:98291720-98291739 | Msa0901550:CDS | 35.0% | |
| CAATGTATTGAGTCCATGAA+GGG | - | chr6_1:98291721-98291740 | Msa0901550:CDS | 35.0% | |
| TTTGGACACACTCACATAAA+TGG | - | chr6_1:98291807-98291826 | Msa0901550:intron | 35.0% | |
| GGTCCAATGACGAATAATTT+CGG | - | chr6_1:98292176-98292195 | Msa0901550:CDS | 35.0% | |
| GTACCGAAATTATTCGTCAT+TGG | + | chr6_1:98292182-98292201 | None:intergenic | 35.0% | |
| TCATTAGTAGACGGTGAAAT+TGG | + | chr6_1:98292204-98292223 | None:intergenic | 35.0% | |
| AATTTCACCGTCTACTAATG+AGG | - | chr6_1:98292203-98292222 | Msa0901550:CDS | 35.0% | |
| CATAGTTATTGGTGTAAGCT+TGG | + | chr6_1:98292335-98292354 | None:intergenic | 35.0% | |
| CTCCAAGTGTATTATGATGA+TGG | + | chr6_1:98292408-98292427 | None:intergenic | 35.0% | |
| CATCATCATAATACACTTGG+AGG | - | chr6_1:98292406-98292425 | Msa0901550:CDS | 35.0% | |
| ATCATAATACACTTGGAGGT+TGG | - | chr6_1:98292410-98292429 | Msa0901550:CDS | 35.0% | |
| !!! | TGAAAGGGCATTTTGGTAAA+TGG | - | chr6_1:98292458-98292477 | Msa0901550:CDS | 35.0% |
| !! | ATGATTCTAGCTTCGTTCAT+TGG | - | chr6_1:98292629-98292648 | Msa0901550:CDS | 35.0% |
| TTCTTATTGGTCCTTCTGAT+TGG | - | chr6_1:98293329-98293348 | Msa0901550:CDS | 35.0% | |
| TCTTATTGGTCCTTCTGATT+GGG | - | chr6_1:98293330-98293349 | Msa0901550:intron | 35.0% | |
| GAATAATCTTCCCAATCAGA+AGG | + | chr6_1:98293343-98293362 | None:intergenic | 35.0% | |
| GATTGGGAAGATTATTCCAA+AGG | - | chr6_1:98293346-98293365 | Msa0901550:intron | 35.0% | |
| GGAAGATTATTCCAAAGGAA+AGG | - | chr6_1:98293351-98293370 | Msa0901550:intron | 35.0% | |
| GATTATTCCAAAGGAAAGGA+AGG | - | chr6_1:98293355-98293374 | Msa0901550:intron | 35.0% | |
| !! | CGAATTTTCTGGTAGGTTAT+GGG | + | chr6_1:98293398-98293417 | None:intergenic | 35.0% |
| CCATAACCTACCAGAAAATT+CGG | - | chr6_1:98293396-98293415 | Msa0901550:intron | 35.0% | |
| CATAACCTACCAGAAAATTC+GGG | - | chr6_1:98293397-98293416 | Msa0901550:intron | 35.0% | |
| TGGTAGAAATGAAGCTCATT+TGG | - | chr6_1:98293561-98293580 | Msa0901550:CDS | 35.0% | |
| GGTAGAAATGAAGCTCATTT+GGG | - | chr6_1:98293562-98293581 | Msa0901550:CDS | 35.0% | |
| AATGAAGCTCATTTGGGAAA+TGG | - | chr6_1:98293568-98293587 | Msa0901550:CDS | 35.0% | |
| ATACAATATGGTCAAGGCAA+TGG | + | chr6_1:98293786-98293805 | None:intergenic | 35.0% | |
| AGTTATAGGTTTGGAAGTCT+AGG | - | chr6_1:98293891-98293910 | Msa0901550:CDS | 35.0% | |
| ACACAATTAATAACGGTCCA+CGG | - | chr6_1:98294195-98294214 | Msa0901550:intron | 35.0% | |
| AGCATTTCAAGAATATCACC+GGG | + | chr6_1:98294224-98294243 | None:intergenic | 35.0% | |
| GAGCATTTCAAGAATATCAC+CGG | + | chr6_1:98294225-98294244 | None:intergenic | 35.0% | |
| ATCTGAAAATGTTCTTGTGC+CGG | + | chr6_1:98294261-98294280 | None:intergenic | 35.0% | |
| !! | CCTACTTTCTTTTGAGTGAA+GGG | + | chr6_1:98294302-98294321 | None:intergenic | 35.0% |
| CCTTCACTCAAAAGAAAGTA+GGG | - | chr6_1:98294300-98294319 | Msa0901550:intron | 35.0% | |
| TGAATTTGAACATGCGAGAT+AGG | + | chr6_1:98294400-98294419 | None:intergenic | 35.0% | |
| GAGAAGAGTGGTAAAATTTG+TGG | - | chr6_1:98294467-98294486 | Msa0901550:CDS | 35.0% | |
| TTCTATTTGTACAAAGACGC+CGG | - | chr6_1:98294508-98294527 | Msa0901550:CDS | 35.0% | |
| ! | GTTAGGTGTCATGAACATAA+AGG | - | chr6_1:98294542-98294561 | Msa0901550:CDS | 35.0% |
| TCCAAGTCAGAATCAAAAAG+AGG | - | chr6_1:98294581-98294600 | Msa0901550:CDS | 35.0% | |
| !! | TCCTCTTTTTGATTCTGACT+TGG | + | chr6_1:98294585-98294604 | None:intergenic | 35.0% |
| CAAAAAGAGGAAATGCTTGT+CGG | - | chr6_1:98294594-98294613 | Msa0901550:CDS | 35.0% | |
| TGGGGAAAATATGGATCTAC+AGG | - | chr6_1:98284072-98284091 | Msa0901550:CDS | 40.0% | |
| CTGCCACAAAATTTCAGTGT+GGG | - | chr6_1:98284104-98284123 | Msa0901550:CDS | 40.0% | |
| ! | ACTCCCACACTGAAATTTTG+TGG | + | chr6_1:98284110-98284129 | None:intergenic | 40.0% |
| ! | GTTCGTCGACTAGTGATTTA+GGG | - | chr6_1:98284147-98284166 | Msa0901550:CDS | 40.0% |
| CGCGTAGTAGTGGTTTATAT+TGG | - | chr6_1:98284203-98284222 | Msa0901550:CDS | 40.0% | |
| TTGGGTGATAATTGTGCATC+AGG | - | chr6_1:98284281-98284300 | Msa0901550:CDS | 40.0% | |
| GCAGCCCATCTATAAACAAT+TGG | + | chr6_1:98284341-98284360 | None:intergenic | 40.0% | |
| ATTTGTCGTCTTCAAGCTGA+TGG | + | chr6_1:98284979-98284998 | None:intergenic | 40.0% | |
| ! | AAATGATGTTGGTAAGTCGG+AGG | - | chr6_1:98285165-98285184 | Msa0901550:CDS | 40.0% |
| ! | GCGTCTCCTTTAAAGAAGAA+AGG | - | chr6_1:98285698-98285717 | Msa0901550:intron | 40.0% |
| GTAAGCTGCCATGAACATAA+AGG | - | chr6_1:98285794-98285813 | Msa0901550:intron | 40.0% | |
| !!! | TGATGTGGTTTTGGAAGCTA+AGG | - | chr6_1:98285931-98285950 | Msa0901550:intron | 40.0% |
| ATCAAAGTTCCTGTTCCACA+AGG | + | chr6_1:98286068-98286087 | None:intergenic | 40.0% | |
| TATTTCTTGCTTTCGCTCTG+TGG | - | chr6_1:98286180-98286199 | Msa0901550:intron | 40.0% | |
| AGAACGAAGACTTGAAGTTG+AGG | - | chr6_1:98286269-98286288 | Msa0901550:intron | 40.0% | |
| GAACGAAGACTTGAAGTTGA+GGG | - | chr6_1:98286270-98286289 | Msa0901550:intron | 40.0% | |
| GAAGTTGAGGGTTAAAACCT+TGG | - | chr6_1:98286282-98286301 | Msa0901550:intron | 40.0% | |
| GGATGAGAAAAAGAAAGCTG+AGG | - | chr6_1:98286348-98286367 | Msa0901550:intron | 40.0% | |
| !! | ACAATTACGGTGCCATAAAG+GGG | - | chr6_1:98286413-98286432 | Msa0901550:intron | 40.0% |
| ! | GAAGATTACCGAGTTGAAAG+AGG | - | chr6_1:98286459-98286478 | Msa0901550:intron | 40.0% |
| TTCAACACCCTCTTTCAACT+CGG | + | chr6_1:98286470-98286489 | None:intergenic | 40.0% | |
| ACAAAAGTTGGCTGGGAATA+TGG | - | chr6_1:98286497-98286516 | Msa0901550:intron | 40.0% | |
| TTGGCTGGGAATATGGAAAA+AGG | - | chr6_1:98286504-98286523 | Msa0901550:intron | 40.0% | |
| TGGCTGGGAATATGGAAAAA+GGG | - | chr6_1:98286505-98286524 | Msa0901550:intron | 40.0% | |
| GACGACTTAGATCAAGATCT+AGG | + | chr6_1:98286556-98286575 | None:intergenic | 40.0% | |
| GTCGTCATTCAAGATTGTTC+GGG | - | chr6_1:98286577-98286596 | Msa0901550:intron | 40.0% | |
| ATTCAAGATTGTTCGGGATG+AGG | - | chr6_1:98286583-98286602 | Msa0901550:intron | 40.0% | |
| ! | ACTCTTGTAATGGCCTTTTG+AGG | - | chr6_1:98286670-98286689 | Msa0901550:intron | 40.0% |
| ! | CAGTAAGACTTCCCTTTTGA+AGG | + | chr6_1:98286952-98286971 | None:intergenic | 40.0% |
| CTTCAAAAGGGAAGTCTTAC+TGG | - | chr6_1:98286950-98286969 | Msa0901550:intron | 40.0% | |
| ! | TACTGGTTGTTTCCCTTCAA+AGG | - | chr6_1:98286967-98286986 | Msa0901550:intron | 40.0% |
| ! | ACTGGTTGTTTCCCTTCAAA+GGG | - | chr6_1:98286968-98286987 | Msa0901550:intron | 40.0% |
| CTGTAAGACTTCCCTTATGA+AGG | + | chr6_1:98287045-98287064 | None:intergenic | 40.0% | |
| CTTCATAAGGGAAGTCTTAC+AGG | - | chr6_1:98287043-98287062 | Msa0901550:intron | 40.0% | |
| GTCACTTGTGAACGATTATG+AGG | + | chr6_1:98287435-98287454 | None:intergenic | 40.0% | |
| AAGGGTCATGACAACTTGTA+CGG | - | chr6_1:98287521-98287540 | Msa0901550:intron | 40.0% | |
| ! | GCACACATTACCGTTCTTTT+GGG | - | chr6_1:98287543-98287562 | Msa0901550:intron | 40.0% |
| TCTTTGCACTCCCAAAAGAA+CGG | + | chr6_1:98287556-98287575 | None:intergenic | 40.0% | |
| !!! | TTCTTTTTTGAGTGGAGGTG+GGG | + | chr6_1:98287640-98287659 | None:intergenic | 40.0% |
| ATCCTTAACGTGAGTCATCA+GGG | + | chr6_1:98287908-98287927 | None:intergenic | 40.0% | |
| AATCCTTAACGTGAGTCATC+AGG | + | chr6_1:98287909-98287928 | None:intergenic | 40.0% | |
| ! | TGCTGTTAGGGCACATTTTA+AGG | + | chr6_1:98288027-98288046 | None:intergenic | 40.0% |
| ! | AATGCTACCTTGTGCTGTTA+GGG | + | chr6_1:98288039-98288058 | None:intergenic | 40.0% |
| ! | AAATGCTACCTTGTGCTGTT+AGG | + | chr6_1:98288040-98288059 | None:intergenic | 40.0% |
| TCCTGAAATTCTTGGATCGA+CGG | + | chr6_1:98288158-98288177 | None:intergenic | 40.0% | |
| CAATATCCTTGACACGCTTT+AGG | - | chr6_1:98288214-98288233 | Msa0901550:intron | 40.0% | |
| !!! | CACTTGATTTTGAGTTGCTC+TGG | - | chr6_1:98288745-98288764 | Msa0901550:intron | 40.0% |
| !!! | CACTTGATTTTGAGTTGCTC+TGG | - | chr6_1:98288745-98288764 | Msa0901550:intron | 40.0% |
| !! | TGGCTAGCCTACATGTAAAA+TGG | + | chr6_1:98289404-98289423 | None:intergenic | 40.0% |
| TGTGTCACAGTGGAAATTGA+AGG | - | chr6_1:98289738-98289757 | Msa0901550:intron | 40.0% | |
| CAAATACCAACTCATGGCAA+AGG | + | chr6_1:98289795-98289814 | None:intergenic | 40.0% | |
| CAAACTATTATGTGGTGTGG+CGG | + | chr6_1:98289829-98289848 | None:intergenic | 40.0% | |
| ! | AACCTCAAATCTGAAACCAG+TGG | + | chr6_1:98289927-98289946 | None:intergenic | 40.0% |
| ! | TGGTTTCAGATTTGAGGTTG+AGG | - | chr6_1:98289928-98289947 | Msa0901550:intron | 40.0% |
| !! | TTTCTTTTGACTGTTGGGAC+GGG | - | chr6_1:98290089-98290108 | Msa0901550:intron | 40.0% |
| GGTTATCCTTCTGCTTTCTT+CGG | + | chr6_1:98290452-98290471 | None:intergenic | 40.0% | |
| ATGTGTATTGCTTGGATACC+TGG | - | chr6_1:98291351-98291370 | Msa0901550:intron | 40.0% | |
| TATTGCTTGGATACCTGGTA+AGG | - | chr6_1:98291356-98291375 | Msa0901550:intron | 40.0% | |
| TTCCACCGTCTTGCAAAATA+AGG | - | chr6_1:98291486-98291505 | Msa0901550:intron | 40.0% | |
| !!! | TACCTTATTTTGCAAGACGG+TGG | + | chr6_1:98291491-98291510 | None:intergenic | 40.0% |
| ! | ACATTGTGTGGTTAGTCCTA+GGG | + | chr6_1:98291707-98291726 | None:intergenic | 40.0% |
| ! | TACATTGTGTGGTTAGTCCT+AGG | + | chr6_1:98291708-98291727 | None:intergenic | 40.0% |
| CATGGACTCAATACATTGTG+TGG | + | chr6_1:98291719-98291738 | None:intergenic | 40.0% | |
| GAATAAGGTCAATCCCTTCA+TGG | + | chr6_1:98291737-98291756 | None:intergenic | 40.0% | |
| ACATGGACCTCATTAGTAGA+CGG | + | chr6_1:98292213-98292232 | None:intergenic | 40.0% | |
| AACATTTGTGTCGTGTCTCA+TGG | + | chr6_1:98292580-98292599 | None:intergenic | 40.0% | |
| !! | TTCTAGCTTCGTTCATTGGA+AGG | - | chr6_1:98292633-98292652 | Msa0901550:CDS | 40.0% |
| !! | CCGAATTTTCTGGTAGGTTA+TGG | + | chr6_1:98293399-98293418 | None:intergenic | 40.0% |
| !! | ATCTGTGTTGACTAGCAGTT+TGG | - | chr6_1:98293444-98293463 | Msa0901550:CDS | 40.0% |
| !! | TCTGTGTTGACTAGCAGTTT+GGG | - | chr6_1:98293445-98293464 | Msa0901550:CDS | 40.0% |
| CGAGTAGTTGTGGTTTATCT+AGG | - | chr6_1:98293502-98293521 | Msa0901550:CDS | 40.0% | |
| AGGACAAGACTCCAATGTTA+TGG | - | chr6_1:98293541-98293560 | Msa0901550:CDS | 40.0% | |
| AATCTTCTCACCAAAAGGGA+CGG | - | chr6_1:98293605-98293624 | Msa0901550:CDS | 40.0% | |
| GGAGCCCATCTATAAACAAT+TGG | + | chr6_1:98293664-98293683 | None:intergenic | 40.0% | |
| TGTTGAACAGATGCAAACCA+AGG | - | chr6_1:98294118-98294137 | Msa0901550:intron | 40.0% | |
| GTTGAACAGATGCAAACCAA+GGG | - | chr6_1:98294119-98294138 | Msa0901550:intron | 40.0% | |
| CAGTTGAGATTCTGTTTGCA+AGG | + | chr6_1:98294150-98294169 | None:intergenic | 40.0% | |
| AGTGAAGGGTAGAAGTGATT+TGG | + | chr6_1:98294288-98294307 | None:intergenic | 40.0% | |
| CCCTTCACTCAAAAGAAAGT+AGG | - | chr6_1:98294299-98294318 | Msa0901550:intron | 40.0% | |
| !! | CCCTACTTTCTTTTGAGTGA+AGG | + | chr6_1:98294303-98294322 | None:intergenic | 40.0% |
| AAATCCGATGAAGCAGACAA+TGG | - | chr6_1:98294362-98294381 | Msa0901550:CDS | 40.0% | |
| CTCGCATGTTCAAATTCAAC+CGG | - | chr6_1:98294402-98294421 | Msa0901550:CDS | 40.0% | |
| ! | GATTTTTCCGTTGAGAAGAG+TGG | - | chr6_1:98294455-98294474 | Msa0901550:CDS | 40.0% |
| !!! | CACCTAACTCTTTTTTCGAC+CGG | + | chr6_1:98294530-98294549 | None:intergenic | 40.0% |
| ! | CCACACTGAAATTTTGTGGC+AGG | + | chr6_1:98284106-98284125 | None:intergenic | 45.0% |
| CCTGCCACAAAATTTCAGTG+TGG | - | chr6_1:98284103-98284122 | Msa0901550:CDS | 45.0% | |
| ! | GGTTCGTCGACTAGTGATTT+AGG | - | chr6_1:98284146-98284165 | Msa0901550:CDS | 45.0% |
| AAACCACTACTACGCGATGA+GGG | + | chr6_1:98284199-98284218 | None:intergenic | 45.0% | |
| TAAACCACTACTACGCGATG+AGG | + | chr6_1:98284200-98284219 | None:intergenic | 45.0% | |
| CTCCAAAGTTATGGCAGAGA+TGG | - | chr6_1:98284251-98284270 | Msa0901550:CDS | 45.0% | |
| CTCCATCTCTGCCATAACTT+TGG | + | chr6_1:98284256-98284275 | None:intergenic | 45.0% | |
| CAAAGTTATGGCAGAGATGG+AGG | - | chr6_1:98284254-98284273 | Msa0901550:CDS | 45.0% | |
| ! | TCTGATTTGTCGGCTGTCAT+AGG | + | chr6_1:98284865-98284884 | None:intergenic | 45.0% |
| TTATGTTGGTACGTTGGAGG+TGG | - | chr6_1:98284934-98284953 | Msa0901550:intron | 45.0% | |
| ! | ATTTTTCGTCTGCGAGCTGA+TGG | + | chr6_1:98285096-98285115 | None:intergenic | 45.0% |
| TGATGTTGGTATGTCAGTGG+TGG | - | chr6_1:98285285-98285304 | Msa0901550:CDS | 45.0% | |
| !! | CATTTGATTTGTCGTCTGCG+AGG | + | chr6_1:98285340-98285359 | None:intergenic | 45.0% |
| !! | AAATGGTGTTGGTACGTCAG+AGG | - | chr6_1:98285403-98285422 | Msa0901550:intron | 45.0% |
| !!! | AGAGGTGGTTTTGGAAGATG+AGG | - | chr6_1:98285421-98285440 | Msa0901550:intron | 45.0% |
| ! | AGAGGTGACTTTGGAAGTTG+AGG | - | chr6_1:98285538-98285557 | Msa0901550:intron | 45.0% |
| ! | ATTTTTCGTCTGCGAGCTGA+TGG | + | chr6_1:98285096-98285115 | None:intergenic | 45.0% |
| AAATGATGTTGGTACGTCGG+AGG | - | chr6_1:98285637-98285656 | Msa0901550:intron | 45.0% | |
| TGATGTTGGTACGTCTGATG+TGG | - | chr6_1:98285916-98285935 | Msa0901550:intron | 45.0% | |
| ! | TGGTACGTCTGATGTGGTTT+TGG | - | chr6_1:98285922-98285941 | Msa0901550:intron | 45.0% |
| GCTAAGGTTGACCATCAACT+CGG | - | chr6_1:98285947-98285966 | Msa0901550:intron | 45.0% | |
| AACAGGAACTTTGATCGTGC+TGG | - | chr6_1:98286073-98286092 | Msa0901550:CDS | 45.0% | |
| !! | TGTGGTGTTGCTTGAAGTGA+TGG | - | chr6_1:98286198-98286217 | Msa0901550:intron | 45.0% |
| ! | AGTGATGGAGGAAGAGTTTC+AGG | - | chr6_1:98286213-98286232 | Msa0901550:intron | 45.0% |
| GAATGCAGATAGGCTAAAGC+AGG | - | chr6_1:98286246-98286265 | Msa0901550:intron | 45.0% | |
| GTTGAGGGTTAAAACCTTGG+AGG | - | chr6_1:98286285-98286304 | Msa0901550:intron | 45.0% | |
| AACCTTGGAGGATCAGTTGA+AGG | - | chr6_1:98286297-98286316 | Msa0901550:intron | 45.0% | |
| TTCCTTCAACTGATCCTCCA+AGG | + | chr6_1:98286302-98286321 | None:intergenic | 45.0% | |
| CAACTCCTTAAAGACAGCGA+AGG | - | chr6_1:98286327-98286346 | Msa0901550:intron | 45.0% | |
| CTCATCCTTCGCTGTCTTTA+AGG | + | chr6_1:98286335-98286354 | None:intergenic | 45.0% | |
| GTTATTAAGCTCCACGCACT+TGG | + | chr6_1:98286395-98286414 | None:intergenic | 45.0% | |
| !! | CAATTACGGTGCCATAAAGG+GGG | - | chr6_1:98286414-98286433 | Msa0901550:intron | 45.0% |
| GGCTGGGAATATGGAAAAAG+GGG | - | chr6_1:98286506-98286525 | Msa0901550:intron | 45.0% | |
| TGGGAATATGGAAAAAGGGG+AGG | - | chr6_1:98286509-98286528 | Msa0901550:intron | 45.0% | |
| ! | TGCTTTTGTAATGGCCGTGT+TGG | - | chr6_1:98286629-98286648 | Msa0901550:intron | 45.0% |
| ! | TAATGGCCGTGTTGGTGTAA+AGG | - | chr6_1:98286637-98286656 | Msa0901550:intron | 45.0% |
| CTGACACCTTTACACCAACA+CGG | + | chr6_1:98286646-98286665 | None:intergenic | 45.0% | |
| ACATGGGTGCTTTCTTCGTA+AGG | - | chr6_1:98286808-98286827 | Msa0901550:intron | 45.0% | |
| AGGCCACCTTCTTTCAAGAA+GGG | - | chr6_1:98286874-98286893 | Msa0901550:intron | 45.0% | |
| CTTCCCTTCTTGAAAGAAGG+TGG | + | chr6_1:98286880-98286899 | None:intergenic | 45.0% | |
| CACCTTCTTTCAAGAAGGGA+AGG | - | chr6_1:98286878-98286897 | Msa0901550:intron | 45.0% | |
| AGCCTTCCCTTCTTGAAAGA+AGG | + | chr6_1:98286883-98286902 | None:intergenic | 45.0% | |
| ! | CTGGTTGTTTCCCTTCAAAG+GGG | - | chr6_1:98286969-98286988 | Msa0901550:intron | 45.0% |
| ! | TGGTTGTTTCCCTTCAAAGG+GGG | - | chr6_1:98286970-98286989 | Msa0901550:intron | 45.0% |
| AGTAAGACTCCCCCTTTGAA+GGG | + | chr6_1:98286982-98287001 | None:intergenic | 45.0% | |
| ! | GGCACACATTACCGTTCTTT+TGG | - | chr6_1:98287542-98287561 | Msa0901550:intron | 45.0% |
| TTCTTGAGGCCCATCACTTT+GGG | + | chr6_1:98287598-98287617 | None:intergenic | 45.0% | |
| TTTCTTGAGGCCCATCACTT+TGG | + | chr6_1:98287599-98287618 | None:intergenic | 45.0% | |
| ! | AACCGAGCCTCTAGTTTCAT+TGG | - | chr6_1:98287877-98287896 | Msa0901550:intron | 45.0% |
| ! | ACCGAGCCTCTAGTTTCATT+GGG | - | chr6_1:98287878-98287897 | Msa0901550:intron | 45.0% |
| TCCCAATGAAACTAGAGGCT+CGG | + | chr6_1:98287882-98287901 | None:intergenic | 45.0% | |
| ! | AGCCTCTAGTTTCATTGGGA+CGG | - | chr6_1:98287882-98287901 | Msa0901550:intron | 45.0% |
| AAATGTGCCCTAACAGCACA+AGG | - | chr6_1:98288029-98288048 | Msa0901550:intron | 45.0% | |
| CTTGAACCTTTGCCATGAGT+TGG | - | chr6_1:98289786-98289805 | Msa0901550:intron | 45.0% | |
| ATTTAGTCAAGATCCGCCAC+TGG | - | chr6_1:98289908-98289927 | Msa0901550:intron | 45.0% | |
| ! | CTCAAATCTGAAACCAGTGG+CGG | + | chr6_1:98289924-98289943 | None:intergenic | 45.0% |
| ! | CAGATTTGAGGTTGAGGTTG+AGG | - | chr6_1:98289934-98289953 | Msa0901550:intron | 45.0% |
| GCACGAACATGACAAAAGAG+TGG | + | chr6_1:98290230-98290249 | None:intergenic | 45.0% | |
| GTCATGTTCGTGCTACCAAA+TGG | - | chr6_1:98290237-98290256 | Msa0901550:intron | 45.0% | |
| GATAGACCGAAGAAAGCAGA+AGG | - | chr6_1:98290443-98290462 | Msa0901550:intron | 45.0% | |
| ! | CATTGTGTGGTTAGTCCTAG+GGG | + | chr6_1:98291706-98291725 | None:intergenic | 45.0% |
| TCACACGGTCAAGACATCAT+TGG | - | chr6_1:98293030-98293049 | Msa0901550:CDS | 45.0% | |
| TTGATTGCGTGTGATTGCGT+GGG | - | chr6_1:98293131-98293150 | Msa0901550:CDS | 45.0% | |
| TGTACAGCCTTCCTTTCCTT+TGG | + | chr6_1:98293365-98293384 | None:intergenic | 45.0% | |
| !! | CTGTGTTGACTAGCAGTTTG+GGG | - | chr6_1:98293446-98293465 | Msa0901550:CDS | 45.0% |
| ! | GAAACAATGACCGTCCCTTT+TGG | + | chr6_1:98293618-98293637 | None:intergenic | 45.0% |
| !! | AAAAAAATTAAAAATCTATA+TGG | + | chr6_1:98291262-98291281 | None:intergenic | 5.0% |
| !! | AAATATTATTTAATAAGAAA+TGG | - | chr6_1:98291611-98291630 | Msa0901550:intron | 5.0% |
| ! | AGTGTGGGAGTGTATGAGCT+TGG | - | chr6_1:98284119-98284138 | Msa0901550:CDS | 50.0% |
| !! | GGAGTGTATGAGCTTGGTGT+AGG | - | chr6_1:98284125-98284144 | Msa0901550:CDS | 50.0% |
| TGGCAGAGATGGAGGTCATT+TGG | - | chr6_1:98284262-98284281 | Msa0901550:CDS | 50.0% | |
| GGCAGAGATGGAGGTCATTT+GGG | - | chr6_1:98284263-98284282 | Msa0901550:CDS | 50.0% | |
| GTTGAACAGATGGAGACCGA+TGG | - | chr6_1:98284712-98284731 | Msa0901550:intron | 50.0% | |
| AATTGTTGTCGGTACGTCGG+AGG | - | chr6_1:98285048-98285067 | Msa0901550:CDS | 50.0% | |
| ! | TGATGTTGGTAAGTCGGAGG+TGG | - | chr6_1:98285168-98285187 | Msa0901550:CDS | 50.0% |
| TGGTAAGTCGGAGGTGGTAT+TGG | - | chr6_1:98285174-98285193 | Msa0901550:CDS | 50.0% | |
| ! | GGAGGTGGTATTGGAAGTTG+AGG | - | chr6_1:98285183-98285202 | Msa0901550:CDS | 50.0% |
| TGGTATGTCAGTGGTGGCTT+TGG | - | chr6_1:98285291-98285310 | Msa0901550:CDS | 50.0% | |
| !! | AGTGGTGGCTTTGGAAGTTG+AGG | - | chr6_1:98285300-98285319 | Msa0901550:CDS | 50.0% |
| ! | TGGTACGTCAGAGGTGGTTT+TGG | - | chr6_1:98285412-98285431 | Msa0901550:intron | 50.0% |
| ATTTGTCGTCTGCGAGCTGA+TGG | + | chr6_1:98285451-98285470 | None:intergenic | 50.0% | |
| TGGTACGTCAGAGGTGACTT+TGG | - | chr6_1:98285529-98285548 | Msa0901550:intron | 50.0% | |
| GGTTGACAATCAGCTCACTG+AGG | - | chr6_1:98285676-98285695 | Msa0901550:intron | 50.0% | |
| AGGGAAGAGTGATAAAGGCG+AGG | - | chr6_1:98285718-98285737 | Msa0901550:intron | 50.0% | |
| AGGCGAGGCAAACAAGAAGA+AGG | - | chr6_1:98285733-98285752 | Msa0901550:intron | 50.0% | |
| AGGGAAGAGTGATAAAGGCG+AGG | - | chr6_1:98285718-98285737 | Msa0901550:intron | 50.0% | |
| !! | GGTGTTGCTTGAAGTGATGG+AGG | - | chr6_1:98286201-98286220 | Msa0901550:intron | 50.0% |
| AGATGTTGAAGCCAAGTGCG+TGG | - | chr6_1:98286381-98286400 | Msa0901550:intron | 50.0% | |
| CTCAACAACCTCCCCCTTTA+TGG | + | chr6_1:98286428-98286447 | None:intergenic | 50.0% | |
| AAAGGGGGAGGTTGTTGAGA+AGG | - | chr6_1:98286429-98286448 | Msa0901550:intron | 50.0% | |
| AGTGCTTAGCGAGCCTCAAA+AGG | + | chr6_1:98286686-98286705 | None:intergenic | 50.0% | |
| ! | TTTGAGGCTCGCTAAGCACT+TGG | - | chr6_1:98286686-98286705 | Msa0901550:intron | 50.0% |
| TGGGTGCTTTCTTCGTAAGG+AGG | - | chr6_1:98286811-98286830 | Msa0901550:intron | 50.0% | |
| GAGGCCACCTTCTTTCAAGA+AGG | - | chr6_1:98286873-98286892 | Msa0901550:intron | 50.0% | |
| CAGTAAGACTCCCCCTTTGA+AGG | + | chr6_1:98286983-98287002 | None:intergenic | 50.0% | |
| CTTCAAAGGGGGAGTCTTAC+TGG | - | chr6_1:98286981-98287000 | Msa0901550:intron | 50.0% | |
| ! | TACTGGCTGCTTCCCTTCAA+AGG | - | chr6_1:98286998-98287017 | Msa0901550:intron | 50.0% |
| ACTGGCTGCTTCCCTTCAAA+GGG | - | chr6_1:98286999-98287018 | Msa0901550:intron | 50.0% | |
| GCCGTCGATCCAAGAATTTC+AGG | - | chr6_1:98288154-98288173 | Msa0901550:intron | 50.0% | |
| CAGACAAGGGGGATCTTCTT+GGG | - | chr6_1:98289640-98289659 | Msa0901550:intron | 50.0% | |
| TTGGGAGCTCATGGTAGTCA+TGG | - | chr6_1:98289658-98289677 | Msa0901550:intron | 50.0% | |
| !! | CGCCACTGGTTTCAGATTTG+AGG | - | chr6_1:98289922-98289941 | Msa0901550:intron | 50.0% |
| TTTGACTGTTGGGACGGGTA+TGG | - | chr6_1:98290094-98290113 | Msa0901550:intron | 50.0% | |
| ! | GGTATGGAGTGCTTGACTGA+AGG | - | chr6_1:98290110-98290129 | Msa0901550:intron | 50.0% |
| GTTGATTGCGTGTGATTGCG+TGG | - | chr6_1:98293130-98293149 | Msa0901550:CDS | 50.0% | |
| CCTACCAGAAAATTCGGGTC+CGG | - | chr6_1:98293402-98293421 | Msa0901550:CDS | 50.0% | |
| CTACCAGAAAATTCGGGTCC+GGG | - | chr6_1:98293403-98293422 | Msa0901550:CDS | 50.0% | |
| ACTCCGAGTTCATAGACTCC+CGG | + | chr6_1:98293424-98293443 | None:intergenic | 50.0% | |
| CACAACTACTCGACACGAGT+CGG | + | chr6_1:98293494-98293513 | None:intergenic | 50.0% | |
| ! | TGTTTGCAAGGCATCTCCCT+TGG | + | chr6_1:98294138-98294157 | None:intergenic | 50.0% |
| GCTGCCATTGTCTGCTTCAT+CGG | + | chr6_1:98294369-98294388 | None:intergenic | 50.0% | |
| GAACTATCTTAGGACGCGAC+CGG | + | chr6_1:98294424-98294443 | None:intergenic | 50.0% | |
| CGCCGGTCGAAAAAAGAGTT+AGG | - | chr6_1:98294525-98294544 | Msa0901550:CDS | 50.0% | |
| CACTACTACGCGATGAGGGT+CGG | + | chr6_1:98284195-98284214 | None:intergenic | 55.0% | |
| TGGTACGTTGGAGGTGGCTT+CGG | - | chr6_1:98284940-98284959 | Msa0901550:intron | 55.0% | |
| !! | GGAGGTGGCTTTGGAAGTTG+AGG | - | chr6_1:98285066-98285085 | Msa0901550:CDS | 55.0% |
| !! | TGGTGTTGGTACGTCAGAGG+TGG | - | chr6_1:98285406-98285425 | Msa0901550:intron | 55.0% |
| TGATGTTGGTACGTCGGAGG+TGG | - | chr6_1:98285640-98285659 | Msa0901550:intron | 55.0% | |
| AGGCGAGGCGAACAAGAAGA+AGG | - | chr6_1:98286009-98286028 | Msa0901550:intron | 55.0% | |
| GAAGGTCGAGTGCGTTCTTG+AGG | - | chr6_1:98286027-98286046 | Msa0901550:intron | 55.0% | |
| TGCGTTCTTGAGGCTGAGAC+TGG | - | chr6_1:98286037-98286056 | Msa0901550:intron | 55.0% | |
| !! | TGATCGTGCTGGCTTCGTGA+AGG | - | chr6_1:98286084-98286103 | Msa0901550:CDS | 55.0% |
| !! | TTACGGTGCCATAAAGGGGG+AGG | - | chr6_1:98286417-98286436 | Msa0901550:intron | 55.0% |
| GATTGTTCGGGATGAGGAGC+TGG | - | chr6_1:98286589-98286608 | Msa0901550:intron | 55.0% | |
| CTGGCTGCTTCCCTTCAAAG+GGG | - | chr6_1:98287000-98287019 | Msa0901550:intron | 55.0% | |
| TGCAAAGAGCTCAACCGAGC+TGG | - | chr6_1:98287568-98287587 | Msa0901550:intron | 55.0% | |
| GCAAAGAGCTCAACCGAGCT+GGG | - | chr6_1:98287569-98287588 | Msa0901550:intron | 55.0% | |
| TTGAGGCCCATCACTTTGGG+AGG | + | chr6_1:98287595-98287614 | None:intergenic | 55.0% | |
| GGCCGTCCCAATGAAACTAG+AGG | + | chr6_1:98287887-98287906 | None:intergenic | 55.0% | |
| GGCCCTGATGACTCACGTTA+AGG | - | chr6_1:98287903-98287922 | Msa0901550:intron | 55.0% | |
| GCTGCACCTAAAGCGTGTCA+AGG | + | chr6_1:98288223-98288242 | None:intergenic | 55.0% | |
| CCAAGAAGATCCCCCTTGTC+TGG | + | chr6_1:98289642-98289661 | None:intergenic | 55.0% | |
| CCAGACAAGGGGGATCTTCT+TGG | - | chr6_1:98289639-98289658 | Msa0901550:intron | 55.0% | |
| GGGATCTTCTTGGGAGCTCA+TGG | - | chr6_1:98289649-98289668 | Msa0901550:intron | 55.0% | |
| GTCATGGCTCCCCCCAAATT+TGG | - | chr6_1:98289674-98289693 | Msa0901550:intron | 55.0% | |
| GGTAGGTAGACACCACACGA+TGG | - | chr6_1:98290744-98290763 | Msa0901550:intron | 55.0% | |
| GTAGCTTTCGTGCCATCGTG+TGG | + | chr6_1:98290759-98290778 | None:intergenic | 55.0% | |
| !! | CCGGACCCGAATTTTCTGGT+AGG | + | chr6_1:98293405-98293424 | None:intergenic | 55.0% |
| ! | ACTCCCGGACCCGAATTTTC+TGG | + | chr6_1:98293409-98293428 | None:intergenic | 55.0% |
| GGTCCGGGAGTCTATGAACT+CGG | - | chr6_1:98293418-98293437 | Msa0901550:CDS | 55.0% | |
| ! | TTGACTAGCAGTTTGGGGCG+CGG | - | chr6_1:98293451-98293470 | Msa0901550:CDS | 55.0% |
| AACTACTCGACACGAGTCGG+TGG | + | chr6_1:98293491-98293510 | None:intergenic | 55.0% | |
| CGACTCGTGTCGAGTAGTTG+TGG | - | chr6_1:98293492-98293511 | Msa0901550:CDS | 55.0% | |
| CGACCCTCATCGCGTAGTAG+TGG | - | chr6_1:98284193-98284212 | Msa0901550:CDS | 60.0% | |
| GGAGGTGGCTTCGGAAGTTG+AGG | - | chr6_1:98284949-98284968 | Msa0901550:intron | 60.0% | |
| TGTTGTCGGTACGTCGGAGG+TGG | - | chr6_1:98285051-98285070 | Msa0901550:CDS | 60.0% | |
| TGGTACGTCGGAGGTGGCTT+TGG | - | chr6_1:98285646-98285665 | Msa0901550:intron | 60.0% | |
| !! | GGAGGTGGCTTTGGAAGCTG+AGG | - | chr6_1:98285655-98285674 | Msa0901550:intron | 60.0% |
| GGTTGACCATCAACTCGGCG+AGG | - | chr6_1:98285952-98285971 | Msa0901550:intron | 60.0% | |
| ! | CTGAGACTGGCTGCTCCTTG+TGG | - | chr6_1:98286050-98286069 | Msa0901550:CDS | 60.0% |
| CTGGCTGCTCCTTGTGGAAC+AGG | - | chr6_1:98286056-98286075 | Msa0901550:CDS | 60.0% | |
| ! | TCACTTTGGGAGGCCCAGCT+CGG | + | chr6_1:98287585-98287604 | None:intergenic | 60.0% |
| AGCTGGGCCTCCCAAAGTGA+TGG | - | chr6_1:98287585-98287604 | Msa0901550:intron | 60.0% | |
| GCTGGGCCTCCCAAAGTGAT+GGG | - | chr6_1:98287586-98287605 | Msa0901550:intron | 60.0% | |
| AATAACGGTCCACGGCGTCC+CGG | - | chr6_1:98294203-98294222 | Msa0901550:intron | 60.0% | |
| AGAATATCACCGGGACGCCG+TGG | + | chr6_1:98294215-98294234 | None:intergenic | 60.0% | |
| CGGTACGTCGGAGGTGGCTT+TGG | - | chr6_1:98285057-98285076 | Msa0901550:CDS | 65.0% | |
| ! | GAGACGCCTCGCCGAGTTGA+TGG | + | chr6_1:98285961-98285980 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 98284071 | 98294622 | 98284071 | ID=Msa0901550;Name=Msa0901550 |
| chr6_1 | mRNA | 98284071 | 98294622 | 98284071 | ID=Msa0901550-mRNA-1;Parent=Msa0901550;Name=Msa0901550-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0|0|1|0.85|0.75|8|0|986 |
| chr6_1 | exon | 98294332 | 98294622 | 98294332 | ID=Msa0901550-mRNA-1:exon:17339;Parent=Msa0901550-mRNA-1 |
| chr6_1 | exon | 98293891 | 98293972 | 98293891 | ID=Msa0901550-mRNA-1:exon:17338;Parent=Msa0901550-mRNA-1 |
| chr6_1 | exon | 98293401 | 98293727 | 98293401 | ID=Msa0901550-mRNA-1:exon:17337;Parent=Msa0901550-mRNA-1 |
| chr6_1 | exon | 98292150 | 98293348 | 98292150 | ID=Msa0901550-mRNA-1:exon:17336;Parent=Msa0901550-mRNA-1 |
| chr6_1 | exon | 98291629 | 98291767 | 98291629 | ID=Msa0901550-mRNA-1:exon:17335;Parent=Msa0901550-mRNA-1 |
| chr6_1 | exon | 98286039 | 98286109 | 98286039 | ID=Msa0901550-mRNA-1:exon:17334;Parent=Msa0901550-mRNA-1 |
| chr6_1 | exon | 98285009 | 98285365 | 98285009 | ID=Msa0901550-mRNA-1:exon:17333;Parent=Msa0901550-mRNA-1 |
| chr6_1 | exon | 98284071 | 98284565 | 98284071 | ID=Msa0901550-mRNA-1:exon:17332;Parent=Msa0901550-mRNA-1 |
| chr6_1 | CDS | 98294332 | 98294622 | 98294332 | ID=Msa0901550-mRNA-1:cds;Parent=Msa0901550-mRNA-1 |
| chr6_1 | CDS | 98293891 | 98293972 | 98293891 | ID=Msa0901550-mRNA-1:cds;Parent=Msa0901550-mRNA-1 |
| chr6_1 | CDS | 98293401 | 98293727 | 98293401 | ID=Msa0901550-mRNA-1:cds;Parent=Msa0901550-mRNA-1 |
| chr6_1 | CDS | 98292150 | 98293348 | 98292150 | ID=Msa0901550-mRNA-1:cds;Parent=Msa0901550-mRNA-1 |
| chr6_1 | CDS | 98291629 | 98291767 | 98291629 | ID=Msa0901550-mRNA-1:cds;Parent=Msa0901550-mRNA-1 |
| chr6_1 | CDS | 98286039 | 98286109 | 98286039 | ID=Msa0901550-mRNA-1:cds;Parent=Msa0901550-mRNA-1 |
| chr6_1 | CDS | 98285009 | 98285365 | 98285009 | ID=Msa0901550-mRNA-1:cds;Parent=Msa0901550-mRNA-1 |
| chr6_1 | CDS | 98284071 | 98284565 | 98284071 | ID=Msa0901550-mRNA-1:cds;Parent=Msa0901550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
