Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901580 | AES77141.2 | 45.833 | 120 | 50 | 2 | 777 | 882 | 9 | 127 | 4.79e-20 | 108 |
| Msa0901580 | AES77141.2 | 73.409 | 613 | 105 | 6 | 80 | 661 | 9 | 594 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901580 | sp|F4K933|ET2_ARATH | 44.086 | 279 | 141 | 6 | 676 | 944 | 34 | 307 | 4.99e-59 | 213 |
| Msa0901580 | sp|F4K933|ET2_ARATH | 37.594 | 133 | 64 | 3 | 9 | 127 | 56 | 183 | 1.07e-16 | 87.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901580 | G7KJT6 | 45.833 | 120 | 50 | 2 | 777 | 882 | 9 | 127 | 2.29e-20 | 108 |
| Msa0901580 | G7KJT6 | 73.409 | 613 | 105 | 6 | 80 | 661 | 9 | 594 | 0.0 | 840 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0901580 | TF | HRT |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901580 | MtrunA17_Chr6g0488421 | 74.576 | 590 | 104 | 5 | 80 | 638 | 22 | 596 | 0.0 | 829 |
| Msa0901580 | MtrunA17_Chr6g0488421 | 45.833 | 120 | 50 | 2 | 777 | 882 | 22 | 140 | 2.11e-24 | 109 |
| Msa0901580 | MtrunA17_Chr6g0488451 | 90.493 | 284 | 27 | 0 | 676 | 959 | 20 | 303 | 0.0 | 547 |
| Msa0901580 | MtrunA17_Chr6g0488451 | 63.200 | 125 | 38 | 1 | 9 | 125 | 42 | 166 | 2.21e-45 | 167 |
| Msa0901580 | MtrunA17_Chr7g0256351 | 73.835 | 279 | 72 | 1 | 676 | 953 | 24 | 302 | 1.42e-140 | 424 |
| Msa0901580 | MtrunA17_Chr7g0256351 | 36.422 | 313 | 162 | 10 | 9 | 296 | 46 | 346 | 1.39e-46 | 171 |
| Msa0901580 | MtrunA17_Chr6g0488431 | 87.838 | 74 | 9 | 0 | 9 | 82 | 39 | 112 | 3.80e-37 | 135 |
| Msa0901580 | MtrunA17_Chr6g0488431 | 55.435 | 92 | 36 | 1 | 676 | 767 | 22 | 108 | 1.06e-23 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901580 | AT5G56780.1 | 44.086 | 279 | 141 | 6 | 676 | 944 | 34 | 307 | 5.07e-60 | 213 |
| Msa0901580 | AT5G56780.1 | 37.594 | 133 | 64 | 3 | 9 | 127 | 56 | 183 | 1.09e-17 | 87.8 |
| Msa0901580 | AT5G56770.1 | 40.940 | 149 | 66 | 3 | 678 | 826 | 75 | 201 | 4.63e-26 | 108 |
| Msa0901580 | AT5G56770.1 | 38.816 | 152 | 74 | 6 | 9 | 156 | 95 | 231 | 7.93e-20 | 90.5 |
Find 182 sgRNAs with CRISPR-Local
Find 616 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATCCTTCGCTGTCTTTA+AGG | 0.099426 | 6_1:+98319660 | None:intergenic |
| CTCTTCCCTTTCTTCTTTAA+AGG | 0.120496 | 6_1:+98320288 | None:intergenic |
| CTTCATAAGGGAAGTCTTAC+AGG | 0.181011 | 6_1:-98318949 | Msa0901580:intron |
| CTTCAAAAGGGAAGTCTTAC+TGG | 0.209552 | 6_1:-98319042 | Msa0901580:CDS |
| ACAAAAGTTGGCTGGGAATA+TGG | 0.217127 | 6_1:-98319495 | Msa0901580:CDS |
| GGCAACATACTTGATTTAAT+TGG | 0.224850 | 6_1:+98311675 | None:intergenic |
| TAAAATTTGTGGAGTGAATT+TGG | 0.231337 | 6_1:-98311523 | Msa0901580:CDS |
| AGTGATGGAGGAAGAGTTTC+AGG | 0.243095 | 6_1:-98319779 | Msa0901580:CDS |
| TTCTTATTCCTTTATGTTCA+TGG | 0.250228 | 6_1:+98320190 | None:intergenic |
| GGTTCGTCGACTAGTGATTT+AGG | 0.281347 | 6_1:-98321846 | Msa0901580:CDS |
| AACAATTACGGTGCCATAAA+GGG | 0.294522 | 6_1:-98319580 | Msa0901580:CDS |
| TAACAATTACGGTGCCATAA+AGG | 0.301114 | 6_1:-98319581 | Msa0901580:CDS |
| TGTACAGCCTTCCTTTCCTT+TGG | 0.307211 | 6_1:+98312639 | None:intergenic |
| TTGCCTCAAAATCTTCATAA+AGG | 0.316183 | 6_1:+98319875 | None:intergenic |
| GGTTCCCAATTGTTTATAGA+TGG | 0.316381 | 6_1:-98321659 | Msa0901580:CDS |
| CGGTACGTCGGAGGTGGCTT+TGG | 0.317378 | 6_1:-98320935 | Msa0901580:CDS |
| ATCTGTGTTGACTAGCAGTT+TGG | 0.320195 | 6_1:-98312557 | Msa0901580:CDS |
| CCACAACCTACCAGAAAATT+CGG | 0.327726 | 6_1:-98312605 | Msa0901580:CDS |
| TGGCAGAGATGGAGGTCATT+TGG | 0.336090 | 6_1:-98321730 | Msa0901580:CDS |
| AAGAAAGGGAAGAGTGATAA+AGG | 0.336242 | 6_1:-98320279 | Msa0901580:CDS |
| TGGTAGAAATGAAGCTCATT+TGG | 0.337116 | 6_1:-98312440 | Msa0901580:CDS |
| TTGGCTGGGAATATGGAAAA+AGG | 0.338346 | 6_1:-98319488 | Msa0901580:CDS |
| GTTGTATCTTGAACTATCTT+AGG | 0.344160 | 6_1:+98311570 | None:intergenic |
| AGTGAAGGGTAGAAGTGATT+TGG | 0.349328 | 6_1:+98311716 | None:intergenic |
| TTCTTATTGGTCCTTCTGAT+TGG | 0.353606 | 6_1:-98312672 | Msa0901580:CDS |
| TCGGATTTGTTATCTTTCAT+AGG | 0.354876 | 6_1:+98311654 | None:intergenic |
| AAGAAAGGGAAGAGTGATAA+AGG | 0.358781 | 6_1:-98320003 | Msa0901580:CDS |
| CTGGCTGCTCCTTGTGGAAC+AGG | 0.360850 | 6_1:-98319936 | Msa0901580:CDS |
| TGGTACGTCAGAGGTGGTTT+TGG | 0.364286 | 6_1:-98320580 | Msa0901580:CDS |
| GAAACAATGACCGTCCCTTT+TGG | 0.364941 | 6_1:+98312386 | None:intergenic |
| GGCAGAGATGGAGGTCATTT+GGG | 0.366944 | 6_1:-98321729 | Msa0901580:CDS |
| CGCGTAGTAGTGGTTTATAT+TGG | 0.370365 | 6_1:-98321789 | Msa0901580:CDS |
| TACTGGTTGTTTCCCTTCAA+AGG | 0.370544 | 6_1:-98319025 | Msa0901580:CDS |
| ACATGTTGCTTACCTTCATA+AGG | 0.371385 | 6_1:-98318962 | Msa0901580:CDS |
| ATGATTCTAGCTTCTCTCAT+TGG | 0.373036 | 6_1:-98322712 | Msa0901580:CDS |
| TGAATTTGAACATGCGAGAT+AGG | 0.378945 | 6_1:+98311604 | None:intergenic |
| TGAAATTGCTTCCCTTCAAA+AGG | 0.380084 | 6_1:-98319055 | Msa0901580:CDS |
| ATTTGAATCTTCTCACCAAA+AGG | 0.382515 | 6_1:-98312401 | Msa0901580:CDS |
| GTTCGTCGACTAGTGATTTA+GGG | 0.384876 | 6_1:-98321845 | Msa0901580:CDS |
| ACTAGCATCATGAAACATAT+TGG | 0.386678 | 6_1:+98319834 | None:intergenic |
| GCAGCCCATCTATAAACAAT+TGG | 0.391240 | 6_1:+98321654 | None:intergenic |
| TTGGGTGATAATTGTGCATC+AGG | 0.396778 | 6_1:-98321711 | Msa0901580:CDS |
| GGTAGAAATGAAGCTCATTT+GGG | 0.398202 | 6_1:-98312439 | Msa0901580:CDS |
| ATGTAAAACTTCCCCTTTGA+AGG | 0.402904 | 6_1:+98318981 | None:intergenic |
| CAAGTCTAAATCAGAAATCT+TGG | 0.403491 | 6_1:-98320133 | Msa0901580:CDS |
| TTTCATGAGATCTTTCTTCA+AGG | 0.405599 | 6_1:-98312367 | Msa0901580:CDS |
| ACTGGTTGTTTCCCTTCAAA+GGG | 0.408509 | 6_1:-98319024 | Msa0901580:CDS |
| TACTGGCTGCTTCCCTTCAA+AGG | 0.410398 | 6_1:-98318994 | Msa0901580:CDS |
| TGGTAAGTCGGAGGTGGTAT+TGG | 0.411057 | 6_1:-98320818 | Msa0901580:CDS |
| CGAGTAGTTGTGGTTTATCT+AGG | 0.411149 | 6_1:-98312499 | Msa0901580:CDS |
| TCTGTGTTGACTAGCAGTTT+GGG | 0.416124 | 6_1:-98312556 | Msa0901580:CDS |
| AATGAAGCTCATTTGGGAAA+TGG | 0.430887 | 6_1:-98312433 | Msa0901580:CDS |
| TCTTATTGGTCCTTCTGATT+GGG | 0.433564 | 6_1:-98312671 | Msa0901580:CDS |
| TGTTTGCAAGGCATCTCCCT+TGG | 0.436980 | 6_1:+98311866 | None:intergenic |
| CTCCATCTCTGCCATAACTT+TGG | 0.438868 | 6_1:+98321739 | None:intergenic |
| TGGTACGTCTGATGTGGTTT+TGG | 0.442826 | 6_1:-98320070 | Msa0901580:CDS |
| TGCGTTCTTGAGGCTGAGAC+TGG | 0.447875 | 6_1:-98319955 | Msa0901580:CDS |
| GAGAAGAGTGGTAAAATTTG+TGG | 0.450994 | 6_1:-98311534 | Msa0901580:CDS |
| TGTGGTGTTGCTTGAAGTGA+TGG | 0.452779 | 6_1:-98319794 | Msa0901580:CDS |
| GCTGCCATTGTCTGCTTCAT+CGG | 0.453379 | 6_1:+98311635 | None:intergenic |
| TCTAAATCAGAAATCTTGGC+TGG | 0.456737 | 6_1:-98320129 | Msa0901580:CDS |
| TGGTACGTCGGAGGTGGCTA+TGG | 0.459813 | 6_1:-98320346 | Msa0901580:CDS |
| GGAGCCCATCTATAAACAAT+TGG | 0.460709 | 6_1:+98312340 | None:intergenic |
| TAGGAAAAGCTGATAATGTA+AGG | 0.463358 | 6_1:-98312480 | Msa0901580:CDS |
| TGTTGTCGGTACGTCGGAGG+TGG | 0.465319 | 6_1:-98320941 | Msa0901580:CDS |
| GTTAGGTGTCATGAACATAA+AGG | 0.469142 | 6_1:-98311459 | Msa0901580:CDS |
| ACTGGCTGCTTCCCTTCAAA+GGG | 0.471071 | 6_1:-98318993 | Msa0901580:CDS |
| GTAAGCTGCCATGAACATAA+AGG | 0.471158 | 6_1:-98320198 | Msa0901580:CDS |
| AGGACAAGACTCCAATGTTA+TGG | 0.472021 | 6_1:-98312460 | Msa0901580:CDS |
| TGAGTACATTTGATTATGCT+TGG | 0.472258 | 6_1:-98311830 | Msa0901580:CDS |
| TGGTACGTCAGAGGTGACTT+TGG | 0.473142 | 6_1:-98320463 | Msa0901580:CDS |
| AACCTTGGAGGATCAGTTGA+AGG | 0.481453 | 6_1:-98319695 | Msa0901580:CDS |
| CTCCAAAGTTATGGCAGAGA+TGG | 0.483770 | 6_1:-98321741 | Msa0901580:CDS |
| AAATGCAAACAAAAGTTGGC+TGG | 0.484257 | 6_1:-98319503 | Msa0901580:CDS |
| GTTATTAAGCTCCACGCACT+TGG | 0.485686 | 6_1:+98319600 | None:intergenic |
| ATTTGTCGTCTTCAAGCTGA+TGG | 0.487334 | 6_1:+98321016 | None:intergenic |
| CTTCATTTCTACCATAACAT+TGG | 0.487845 | 6_1:+98312449 | None:intergenic |
| GCGTCTCCTTTAAAGAAGAA+AGG | 0.490646 | 6_1:-98320294 | Msa0901580:CDS |
| AACAGGAACTTTGATCGTGC+TGG | 0.490680 | 6_1:-98319919 | Msa0901580:CDS |
| GTTCCCAATTGTTTATAGAT+GGG | 0.490688 | 6_1:-98321658 | Msa0901580:CDS |
| GCTTGGAACACAATTAATAA+CGG | 0.491690 | 6_1:-98311813 | Msa0901580:CDS |
| CACAACCTACCAGAAAATTC+GGG | 0.494256 | 6_1:-98312604 | Msa0901580:CDS |
| CTGAGACTGGCTGCTCCTTG+TGG | 0.495309 | 6_1:-98319942 | Msa0901580:CDS |
| TTGAAAATGCAAACAAAAGT+TGG | 0.496314 | 6_1:-98319507 | Msa0901580:CDS |
| CTCGCATGTTCAAATTCAAC+CGG | 0.497027 | 6_1:-98311599 | Msa0901580:CDS |
| ATCTGAAAATGTTCTTGTGC+CGG | 0.498102 | 6_1:+98311743 | None:intergenic |
| GAAGTTGAGGGTTAAAACCT+TGG | 0.498646 | 6_1:-98319710 | Msa0901580:CDS |
| CAGTTGAGATTCTGTTTGCA+AGG | 0.499330 | 6_1:+98311854 | None:intergenic |
| CATGTTGCTTACCTTCATAA+GGG | 0.501232 | 6_1:-98318961 | Msa0901580:CDS |
| CCTTCACTCAAAAGAAAGTA+GGG | 0.503569 | 6_1:-98311701 | Msa0901580:CDS |
| GTGGAGCTTAATAACAATTA+CGG | 0.503730 | 6_1:-98319592 | Msa0901580:CDS |
| TTTGAATCTTCTCACCAAAA+GGG | 0.504759 | 6_1:-98312400 | Msa0901580:CDS |
| ATGCTCAACAAAATATCTTC+CGG | 0.505608 | 6_1:-98311762 | Msa0901580:CDS |
| GAACGAAGACTTGAAGTTGA+GGG | 0.508098 | 6_1:-98319722 | Msa0901580:CDS |
| ATTTGTCGTCTGCGAGCTGA+TGG | 0.510309 | 6_1:+98320544 | None:intergenic |
| CCCTTCACTCAAAAGAAAGT+AGG | 0.510670 | 6_1:-98311702 | Msa0901580:CDS |
| CCTACCAGAAAATTCGGGTC+CGG | 0.511355 | 6_1:-98312599 | Msa0901580:CDS |
| CTGTAAAATCGAATGCAGAT+AGG | 0.511860 | 6_1:-98319756 | Msa0901580:CDS |
| CAAGATTTCTGATTTAGACT+TGG | 0.512503 | 6_1:+98320134 | None:intergenic |
| TTGACTAGCAGTTTGGGGCG+CGG | 0.514412 | 6_1:-98312550 | Msa0901580:CDS |
| CTGTAAGACTTCCCTTATGA+AGG | 0.517105 | 6_1:+98318950 | None:intergenic |
| CAGCCCATCTATAAACAATT+GGG | 0.524933 | 6_1:+98321655 | None:intergenic |
| GAGCATTTCAAGAATATCAC+CGG | 0.525607 | 6_1:+98311779 | None:intergenic |
| AGAGGTGACTTTGGAAGTTG+AGG | 0.528501 | 6_1:-98320454 | Msa0901580:CDS |
| CTACCAGAAAATTCGGGTCC+GGG | 0.529284 | 6_1:-98312598 | Msa0901580:CDS |
| GAAATTGCTTCCCTTCAAAA+GGG | 0.529820 | 6_1:-98319054 | Msa0901580:CDS |
| CGTCTCCTTTAAAGAAGAAA+GGG | 0.533503 | 6_1:-98320293 | Msa0901580:CDS |
| GATTGGGAAGATTATTCCAA+AGG | 0.533673 | 6_1:-98312655 | Msa0901580:CDS |
| GAAGATTACCGAGTTGAAAG+AGG | 0.534559 | 6_1:-98319533 | Msa0901580:CDS |
| GGAAGATTATTCCAAAGGAA+AGG | 0.537391 | 6_1:-98312650 | Msa0901580:CDS |
| TACTTTACAAGCTTCACCAT+CGG | 0.537393 | 6_1:+98321264 | None:intergenic |
| TTCTAGCTTCTCTCATTGGA+AGG | 0.541418 | 6_1:-98322708 | Msa0901580:intron |
| TGATGTTGGTACGTCGGAGG+TGG | 0.543860 | 6_1:-98320352 | Msa0901580:CDS |
| GCATGGAACAAAGTTAATAA+CGG | 0.546568 | 6_1:-98321211 | Msa0901580:intron |
| GGAGGTGGCTTTGGAAGTTG+AGG | 0.549182 | 6_1:-98320926 | Msa0901580:CDS |
| TGATGTTGGTAAGTCGGAGG+TGG | 0.549671 | 6_1:-98320824 | Msa0901580:CDS |
| TTCCTTCAACTGATCCTCCA+AGG | 0.550625 | 6_1:+98319693 | None:intergenic |
| AATGCAAACAAAAGTTGGCT+GGG | 0.557092 | 6_1:-98319502 | Msa0901580:CDS |
| TATTTCTTGCTTTCGCTCTG+TGG | 0.557916 | 6_1:-98319812 | Msa0901580:CDS |
| GTTGAGGGTTAAAACCTTGG+AGG | 0.559815 | 6_1:-98319707 | Msa0901580:CDS |
| GGAGGTGGTATTGGAAGTTG+AGG | 0.560183 | 6_1:-98320809 | Msa0901580:CDS |
| TGTAAAACTTCCCCTTTGAA+GGG | 0.561552 | 6_1:+98318982 | None:intergenic |
| TGATCGTGCTGGCTTCGTGA+AGG | 0.562946 | 6_1:-98319908 | Msa0901580:CDS |
| GATTATTCCAAAGGAAAGGA+AGG | 0.563588 | 6_1:-98312646 | Msa0901580:CDS |
| AGTGTGGGAGTGTATGAGCT+TGG | 0.566389 | 6_1:-98321873 | Msa0901580:CDS |
| TTCAACACCCTCTTTCAACT+CGG | 0.567041 | 6_1:+98319525 | None:intergenic |
| CTAAATCAGAAATCTTGGCT+GGG | 0.567331 | 6_1:-98320128 | Msa0901580:CDS |
| GAACTATCTTAGGACGCGAC+CGG | 0.567906 | 6_1:+98311580 | None:intergenic |
| GAAGGTCGAGTGCGTTCTTG+AGG | 0.569335 | 6_1:-98319965 | Msa0901580:CDS |
| ATTTAACATCTGTGAGCTGA+TGG | 0.570958 | 6_1:+98320782 | None:intergenic |
| GAATAATCTTCCCAATCAGA+AGG | 0.571601 | 6_1:+98312661 | None:intergenic |
| AATAACGGTCCACGGCGTCC+CGG | 0.572061 | 6_1:-98311798 | Msa0901580:CDS |
| TAGAGACATTTGATTATGCA+TGG | 0.572285 | 6_1:-98321228 | Msa0901580:CDS |
| CACAACTACTCGACACGAGT+CGG | 0.572516 | 6_1:+98312510 | None:intergenic |
| CACTACTACGCGATGAGGGT+CGG | 0.574007 | 6_1:+98321800 | None:intergenic |
| GAATGCAGATAGGCTAAAGC+AGG | 0.576873 | 6_1:-98319746 | Msa0901580:CDS |
| AGGCGAGGCAAACAAGAAGA+AGG | 0.577475 | 6_1:-98320259 | Msa0901580:CDS |
| CAAAGTTATGGCAGAGATGG+AGG | 0.581386 | 6_1:-98321738 | Msa0901580:CDS |
| AAACCACTACTACGCGATGA+GGG | 0.582802 | 6_1:+98321796 | None:intergenic |
| CGACCCTCATCGCGTAGTAG+TGG | 0.584628 | 6_1:-98321799 | Msa0901580:CDS |
| GGAGTGTATGAGCTTGGTGT+AGG | 0.586874 | 6_1:-98321867 | Msa0901580:CDS |
| AAGATTACCGAGTTGAAAGA+GGG | 0.588318 | 6_1:-98319532 | Msa0901580:CDS |
| TGGTTGTTTCCCTTCAAAGG+GGG | 0.596692 | 6_1:-98319022 | Msa0901580:CDS |
| AGAACGAAGACTTGAAGTTG+AGG | 0.598074 | 6_1:-98319723 | Msa0901580:CDS |
| AGGCGAGGCGAACAAGAAGA+AGG | 0.599152 | 6_1:-98319983 | Msa0901580:CDS |
| CTGCCACAAAATTTCAGTGT+GGG | 0.601821 | 6_1:-98321888 | Msa0901580:CDS |
| CTGTGTTGACTAGCAGTTTG+GGG | 0.603432 | 6_1:-98312555 | Msa0901580:CDS |
| ACAATTACGGTGCCATAAAG+GGG | 0.606801 | 6_1:-98319579 | Msa0901580:CDS |
| AATTGTTGTCGGTACGTCGG+AGG | 0.606980 | 6_1:-98320944 | Msa0901580:CDS |
| ACTCCGAGTTCATAGACTCC+CGG | 0.608999 | 6_1:+98312580 | None:intergenic |
| TGGTGTTGGTACGTCAGAGG+TGG | 0.611119 | 6_1:-98320586 | Msa0901580:CDS |
| AAATGATATTGGTACGTCAG+AGG | 0.614648 | 6_1:-98320472 | Msa0901580:CDS |
| TAAACCACTACTACGCGATG+AGG | 0.619750 | 6_1:+98321795 | None:intergenic |
| AGATGTTGAAGCCAAGTGCG+TGG | 0.619891 | 6_1:-98319611 | Msa0901580:CDS |
| AATCTTCTCACCAAAAGGGA+CGG | 0.621847 | 6_1:-98312396 | Msa0901580:CDS |
| TTCTATTTGTACAAAGACGC+CGG | 0.623541 | 6_1:-98311493 | Msa0901580:CDS |
| GGTCCGGGAGTCTATGAACT+CGG | 0.623764 | 6_1:-98312583 | Msa0901580:CDS |
| AGAATATCACCGGGACGCCG+TGG | 0.625598 | 6_1:+98311789 | None:intergenic |
| GGAGGTGGCTATGGAAGCTG+AGG | 0.635092 | 6_1:-98320337 | Msa0901580:CDS |
| CTGGTTGTTTCCCTTCAAAG+GGG | 0.637955 | 6_1:-98319023 | Msa0901580:CDS |
| GTTGAACAGATGCAAACCAA+GGG | 0.638402 | 6_1:-98311882 | Msa0901580:intron |
| GCTAAGGTTGACCATCAACT+CGG | 0.639233 | 6_1:-98320045 | Msa0901580:CDS |
| ACACAATTAATAACGGTCCA+CGG | 0.642408 | 6_1:-98311806 | Msa0901580:CDS |
| ATCAAAGTTCCTGTTCCACA+AGG | 0.643457 | 6_1:+98319927 | None:intergenic |
| CAACTCCTTAAAGACAGCGA+AGG | 0.644625 | 6_1:-98319665 | Msa0901580:CDS |
| AAATGGTGTTGGTACGTCAG+AGG | 0.644749 | 6_1:-98320589 | Msa0901580:CDS |
| TGATGTTGGTACGTCTGATG+TGG | 0.645458 | 6_1:-98320076 | Msa0901580:CDS |
| TGTTGAACAGATGCAAACCA+AGG | 0.647561 | 6_1:-98311883 | Msa0901580:intron |
| AACTACTCGACACGAGTCGG+TGG | 0.649363 | 6_1:+98312513 | None:intergenic |
| AGCATTTCAAGAATATCACC+GGG | 0.651967 | 6_1:+98311780 | None:intergenic |
| AAATGATGTTGGTAAGTCGG+AGG | 0.659032 | 6_1:-98320827 | Msa0901580:CDS |
| AGGGAAGAGTGATAAAGGCG+AGG | 0.661540 | 6_1:-98319998 | Msa0901580:CDS |
| AAATGATGTTGGTACGTCGG+AGG | 0.665439 | 6_1:-98320355 | Msa0901580:CDS |
| AGGGAAGAGTGATAAAGGCG+AGG | 0.671170 | 6_1:-98320274 | Msa0901580:CDS |
| AAATCCGATGAAGCAGACAA+TGG | 0.675612 | 6_1:-98311639 | Msa0901580:CDS |
| CAATTACGGTGCCATAAAGG+GGG | 0.679621 | 6_1:-98319578 | Msa0901580:CDS |
| GGTGTTGCTTGAAGTGATGG+AGG | 0.685411 | 6_1:-98319791 | Msa0901580:CDS |
| CCTGCCACAAAATTTCAGTG+TGG | 0.687926 | 6_1:-98321889 | Msa0901580:CDS |
| GGTTGACCATCAACTCGGCG+AGG | 0.692349 | 6_1:-98320040 | Msa0901580:CDS |
| CTGGCTGCTTCCCTTCAAAG+GGG | 0.702731 | 6_1:-98318992 | Msa0901580:CDS |
| GTTGAACAGATGGAGACCGA+TGG | 0.714850 | 6_1:-98321280 | Msa0901580:intron |
| GGTTGACAATCAGCTCACTG+AGG | 0.745907 | 6_1:-98320316 | Msa0901580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAAATAAAATATATT+TGG | - | chr6_1:98319911-98319930 | Msa0901580:CDS | 0.0% |
| !! | AAATAAAATTAATAGTTTAG+AGG | + | chr6_1:98311443-98311462 | None:intergenic | 10.0% |
| !! | CTATAAAAAAAAAAAACAAA+AGG | + | chr6_1:98311575-98311594 | None:intergenic | 10.0% |
| !!! | TTTGTTTTTTTTTTTTATAG+AGG | - | chr6_1:98311575-98311594 | Msa0901580:CDS | 10.0% |
| !!! | TTGTTTTTTTTTTTTATAGA+GGG | - | chr6_1:98311576-98311595 | Msa0901580:CDS | 10.0% |
| !!! | AAATTATGCATTTTTTTATT+AGG | - | chr6_1:98315956-98315975 | Msa0901580:intron | 10.0% |
| !!! | AATTATGCATTTTTTTATTA+GGG | - | chr6_1:98315957-98315976 | Msa0901580:intron | 10.0% |
| !!! | TTTTAGTATGTAATTTTTTA+TGG | - | chr6_1:98317321-98317340 | Msa0901580:intron | 10.0% |
| !! | TATGATTATATAACATAATT+TGG | - | chr6_1:98317481-98317500 | Msa0901580:intron | 10.0% |
| !!! | ATTATTTTTTTTTTTGCTAA+TGG | + | chr6_1:98318307-98318326 | None:intergenic | 10.0% |
| !! | TAAAAAATTAGAGTAAAAAA+AGG | - | chr6_1:98319152-98319171 | Msa0901580:intron | 10.0% |
| !!! | TTATTTCTTCTTTAATTTTT+TGG | - | chr6_1:98319991-98320010 | Msa0901580:CDS | 10.0% |
| !! | CAAATAAAAAAAATTAAAAG+TGG | + | chr6_1:98320037-98320056 | None:intergenic | 10.0% |
| !! | AATTAAAATTAATAGATTAG+AGG | + | chr6_1:98320798-98320817 | None:intergenic | 10.0% |
| !!! | TCATTTATATTTAATCTTTT+GGG | + | chr6_1:98322167-98322186 | None:intergenic | 10.0% |
| !!! | TTCATTTATATTTAATCTTT+TGG | + | chr6_1:98322168-98322187 | None:intergenic | 10.0% |
| !! | AAAAGATTAAATATAAATGA+AGG | - | chr6_1:98322167-98322186 | Msa0901580:intron | 10.0% |
| !!! | TGTTTTTTTTTTTTATAGAG+GGG | - | chr6_1:98311577-98311596 | Msa0901580:CDS | 15.0% |
| !! | AACAAGTTATAAATAAAAAG+TGG | + | chr6_1:98311847-98311866 | None:intergenic | 15.0% |
| !! | GCAATTAATATATATGAATT+CGG | + | chr6_1:98312126-98312145 | None:intergenic | 15.0% |
| !!! | TCAATTTGTTAATATCAATA+AGG | - | chr6_1:98312515-98312534 | Msa0901580:CDS | 15.0% |
| !! | TAGGAAATCTAAATAAAAAA+AGG | + | chr6_1:98314862-98314881 | None:intergenic | 15.0% |
| !!! | TCTTTATTTGTTTTCTTTTA+AGG | - | chr6_1:98314961-98314980 | Msa0901580:intron | 15.0% |
| !!! | TTGTTATGAAATTTTGATTT+TGG | + | chr6_1:98315326-98315345 | None:intergenic | 15.0% |
| !!! | TTTATTTTTTCTTTTTTGAG+TGG | + | chr6_1:98315769-98315788 | None:intergenic | 15.0% |
| !! | TTAACTTAAAAATAGAAACA+TGG | + | chr6_1:98315832-98315851 | None:intergenic | 15.0% |
| !!! | ATAATTGCTAATTTTGATTT+TGG | - | chr6_1:98315872-98315891 | Msa0901580:intron | 15.0% |
| !!! | ATTATGCATTTTTTTATTAG+GGG | - | chr6_1:98315958-98315977 | Msa0901580:intron | 15.0% |
| !!! | TTTGTTTGTCTTTTATTTAT+TGG | + | chr6_1:98316185-98316204 | None:intergenic | 15.0% |
| !!! | AATTTCGTTTTTATATGTTT+AGG | - | chr6_1:98316303-98316322 | Msa0901580:intron | 15.0% |
| !!! | TTATTGATTTTTTTTTACCA+TGG | - | chr6_1:98317600-98317619 | Msa0901580:intron | 15.0% |
| !! | TGTAGATATTAAATAATTTC+AGG | + | chr6_1:98317655-98317674 | None:intergenic | 15.0% |
| !! | ATAGTATTAATACCAAATTT+GGG | + | chr6_1:98317810-98317829 | None:intergenic | 15.0% |
| !! | TATAGTATTAATACCAAATT+TGG | + | chr6_1:98317811-98317830 | None:intergenic | 15.0% |
| !! | TTTGGTATTAATACTATATT+AGG | - | chr6_1:98317813-98317832 | Msa0901580:intron | 15.0% |
| !! | AAACAACTAAAAAATGAATT+TGG | - | chr6_1:98318633-98318652 | Msa0901580:intron | 15.0% |
| !! | TAATTTACTCATTGAAAAAA+GGG | + | chr6_1:98319207-98319226 | None:intergenic | 15.0% |
| !! | TATTATTTAATAAGAAATGG+TGG | - | chr6_1:98319736-98319755 | Msa0901580:CDS | 15.0% |
| !! | AAAAAAATTAAAAGTGGTTA+GGG | + | chr6_1:98320031-98320050 | None:intergenic | 15.0% |
| !! | AAAAAAAATTAAAAGTGGTT+AGG | + | chr6_1:98320032-98320051 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTGACAAAGATA+TGG | - | chr6_1:98320100-98320119 | Msa0901580:CDS | 15.0% |
| !! | AAGTAATTGATATTATGAAA+GGG | - | chr6_1:98320565-98320584 | Msa0901580:CDS | 15.0% |
| !!! | ATATTAGAAGCTTTAATAAT+AGG | - | chr6_1:98320620-98320639 | Msa0901580:CDS | 15.0% |
| !! | CTGAAAAATATTGAATTAAA+TGG | - | chr6_1:98321100-98321119 | Msa0901580:intron | 15.0% |
| !! | CAAAATAAACATATACAATA+TGG | + | chr6_1:98321910-98321929 | None:intergenic | 15.0% |
| !!! | TGTTAATGCTTCAAAATTTT+AGG | - | chr6_1:98311485-98311504 | Msa0901580:CDS | 20.0% |
| !! | ACACCTTTATAAAAATTAGT+TGG | - | chr6_1:98311872-98311891 | Msa0901580:CDS | 20.0% |
| !!! | ACACCAACTAATTTTTATAA+AGG | + | chr6_1:98311878-98311897 | None:intergenic | 20.0% |
| !!! | TTTTTAACAAGTTATCCTAT+AGG | + | chr6_1:98311914-98311933 | None:intergenic | 20.0% |
| !! | TTCATAATTATCAACAATCA+TGG | + | chr6_1:98312595-98312614 | None:intergenic | 20.0% |
| !! | AGTATCACAAAAAATTATGT+TGG | - | chr6_1:98313041-98313060 | Msa0901580:intron | 20.0% |
| !! | AGTATCATAAAAAATGATGT+TGG | - | chr6_1:98313275-98313294 | Msa0901580:intron | 20.0% |
| !! | AGTATCACAAAAAATGATAT+TGG | - | chr6_1:98313630-98313649 | Msa0901580:intron | 20.0% |
| !! | AATAACCAGCAATTAAAAAT+AGG | + | chr6_1:98314881-98314900 | None:intergenic | 20.0% |
| !! | CAAAGACTTTCATAAATTAA+GGG | + | chr6_1:98314906-98314925 | None:intergenic | 20.0% |
| !!! | CAACTTTGATTTTTTCATTT+GGG | + | chr6_1:98315488-98315507 | None:intergenic | 20.0% |
| !! | TAAAAAAGGTCGAAATTATT+AGG | + | chr6_1:98315532-98315551 | None:intergenic | 20.0% |
| !!! | CTTTTGTGCTAAATAAATAA+GGG | - | chr6_1:98315597-98315616 | Msa0901580:intron | 20.0% |
| !!! | TGATAACTTTTTTTTAGAGA+AGG | - | chr6_1:98315623-98315642 | Msa0901580:intron | 20.0% |
| !!! | GATAACTTTTTTTTAGAGAA+GGG | - | chr6_1:98315624-98315643 | Msa0901580:intron | 20.0% |
| !!! | ATTGTTTGCATATTTTGTTT+TGG | - | chr6_1:98316424-98316443 | Msa0901580:intron | 20.0% |
| !!! | ATACAGTTTTGAATGATATA+TGG | - | chr6_1:98316555-98316574 | Msa0901580:intron | 20.0% |
| !!! | TACAGTTTTGAATGATATAT+GGG | - | chr6_1:98316556-98316575 | Msa0901580:intron | 20.0% |
| !! | TGGATTTGACTATAAATTTA+AGG | + | chr6_1:98316769-98316788 | None:intergenic | 20.0% |
| !! | ATGTAAATTGATCTATGTTT+GGG | + | chr6_1:98316807-98316826 | None:intergenic | 20.0% |
| !! | AATGTAAATTGATCTATGTT+TGG | + | chr6_1:98316808-98316827 | None:intergenic | 20.0% |
| !! | AGCTAAAAGTTACAAATTTA+AGG | + | chr6_1:98316842-98316861 | None:intergenic | 20.0% |
| !! | ATGTAAATTGATCTATGTTT+GGG | + | chr6_1:98316807-98316826 | None:intergenic | 20.0% |
| !! | AATGTAAATTGATCTATGTT+TGG | + | chr6_1:98316808-98316827 | None:intergenic | 20.0% |
| !! | AGCTAAAAGTTACAAATTTA+AGG | + | chr6_1:98316842-98316861 | None:intergenic | 20.0% |
| !! | TGGATTTGACTATAAATTTA+AGG | + | chr6_1:98316769-98316788 | None:intergenic | 20.0% |
| !! | ATGTAAATTGATCTATGTTT+GGG | + | chr6_1:98316807-98316826 | None:intergenic | 20.0% |
| !! | AATGTAAATTGATCTATGTT+TGG | + | chr6_1:98316808-98316827 | None:intergenic | 20.0% |
| !! | AGCTAAAAGTTACAAATTTA+AGG | + | chr6_1:98316842-98316861 | None:intergenic | 20.0% |
| !! | TGCATTGAATTAATAGATAT+AGG | + | chr6_1:98317355-98317374 | None:intergenic | 20.0% |
| !! | ATAGAGAAATAAATAGTATG+AGG | + | chr6_1:98317444-98317463 | None:intergenic | 20.0% |
| !! | GATATTAAACAAAATAAGCA+TGG | + | chr6_1:98317555-98317574 | None:intergenic | 20.0% |
| !! | TAGTATTAATACCAAATTTG+GGG | + | chr6_1:98317809-98317828 | None:intergenic | 20.0% |
| !! | ATATTACACAAACTATTATG+TGG | + | chr6_1:98317958-98317977 | None:intergenic | 20.0% |
| !! | ATATATGTGTTGCAAATATT+TGG | - | chr6_1:98317994-98318013 | Msa0901580:intron | 20.0% |
| !!! | TTAGTATTTTTGTTGTTGTA+TGG | - | chr6_1:98318100-98318119 | Msa0901580:intron | 20.0% |
| !! | TAAATATACTATTGCCATTA+TGG | + | chr6_1:98318137-98318156 | None:intergenic | 20.0% |
| !!! | ATTTATTTTCTTTTGACTGT+TGG | - | chr6_1:98318204-98318223 | Msa0901580:intron | 20.0% |
| !!! | TTTATTTTCTTTTGACTGTT+GGG | - | chr6_1:98318205-98318224 | Msa0901580:intron | 20.0% |
| !!! | TTGAAGTTTTAGTAAAACAA+TGG | + | chr6_1:98318480-98318499 | None:intergenic | 20.0% |
| !! | TAAACATATTTATTATGCCT+TGG | - | chr6_1:98318520-98318539 | Msa0901580:intron | 20.0% |
| !!! | TTATTTTGAAAAGAATTCCA+AGG | + | chr6_1:98318540-98318559 | None:intergenic | 20.0% |
| !!! | AAAAAATGAATTTGGTAATG+AGG | - | chr6_1:98318641-98318660 | Msa0901580:intron | 20.0% |
| !!! | AAAAATGAATTTGGTAATGA+GGG | - | chr6_1:98318642-98318661 | Msa0901580:intron | 20.0% |
| !! | TAAGAAATTTAGTGTATGTT+TGG | - | chr6_1:98318827-98318846 | Msa0901580:intron | 20.0% |
| !! | CTAATTTACTCATTGAAAAA+AGG | + | chr6_1:98319208-98319227 | None:intergenic | 20.0% |
| !!! | AAAAAAGTTTTATGCATTAG+TGG | - | chr6_1:98319307-98319326 | Msa0901580:intron | 20.0% |
| !!! | AAAAAGTTTTATGCATTAGT+GGG | - | chr6_1:98319308-98319327 | Msa0901580:intron | 20.0% |
| !! | TATATTAACATACAAGTGAA+TGG | - | chr6_1:98319514-98319533 | Msa0901580:CDS | 20.0% |
| !! | GAATTGATGAAAAATGTATT+TGG | + | chr6_1:98319557-98319576 | None:intergenic | 20.0% |
| !! | TTGACCTTATTCATTATATA+TGG | - | chr6_1:98319867-98319886 | Msa0901580:CDS | 20.0% |
| !! | TGACCTTATTCATTATATAT+GGG | - | chr6_1:98319868-98319887 | Msa0901580:CDS | 20.0% |
| !! | TATTAACTAGTCATAGTTAT+TGG | + | chr6_1:98320468-98320487 | None:intergenic | 20.0% |
| !! | GAAGTAATTGATATTATGAA+AGG | - | chr6_1:98320564-98320583 | Msa0901580:CDS | 20.0% |
| !!! | TGTTAATGCTTAACATTTTT+AGG | - | chr6_1:98320859-98320878 | Msa0901580:CDS | 20.0% |
| !!! | TTTCAGCTAAGTAATTTTTT+GGG | - | chr6_1:98320961-98320980 | Msa0901580:CDS | 20.0% |
| !! | AAAATCAACTTATAGTTGTT+GGG | + | chr6_1:98321029-98321048 | None:intergenic | 20.0% |
| !! | AAAAATCAACTTATAGTTGT+TGG | + | chr6_1:98321030-98321049 | None:intergenic | 20.0% |
| !!! | TTTCACTGTAGATTTTTATT+TGG | - | chr6_1:98321192-98321211 | Msa0901580:intron | 20.0% |
| !!! | GGTTTTTAGATCTAAAAATA+CGG | - | chr6_1:98321213-98321232 | Msa0901580:CDS | 20.0% |
| !!! | TATTGTTTTCAGATTCTTAT+TGG | - | chr6_1:98321428-98321447 | Msa0901580:intron | 20.0% |
| !!! | TTTTCCAATTGTTTATAGAT+GGG | - | chr6_1:98321769-98321788 | Msa0901580:CDS | 20.0% |
| !! | ATAATATGTATCTCAAATCA+TGG | + | chr6_1:98321939-98321958 | None:intergenic | 20.0% |
| !! | TTAATTAAGAGCTAAGTTAT+AGG | - | chr6_1:98321989-98322008 | Msa0901580:intron | 20.0% |
| !! | GCTAATGTCTAAAGATTTTT+CGG | - | chr6_1:98311757-98311776 | Msa0901580:CDS | 25.0% |
| ! | TACATACATACATACATACA+AGG | + | chr6_1:98321368-98321387 | None:intergenic | 25.0% |
| ! | ATATATATGAATTCGGTCTA+TGG | + | chr6_1:98312119-98312138 | None:intergenic | 25.0% |
| ! | AGAAAAATACTCCAAAGTTA+TGG | - | chr6_1:98312363-98312382 | Msa0901580:CDS | 25.0% |
| !!! | TTTCATGAGATCATTTTTCA+AGG | - | chr6_1:98312432-98312451 | Msa0901580:CDS | 25.0% |
| !!! | TTCATGAGATCATTTTTCAA+GGG | - | chr6_1:98312433-98312452 | Msa0901580:CDS | 25.0% |
| ! | AACATTTACTATGTTCTGTT+AGG | + | chr6_1:98312662-98312681 | None:intergenic | 25.0% |
| !! | AATACTATTTGTTGAACAGA+TGG | - | chr6_1:98312823-98312842 | Msa0901580:intron | 25.0% |
| ! | AGCATTTGAAGAATATCATT+GGG | + | chr6_1:98312938-98312957 | None:intergenic | 25.0% |
| ! | CAGATGAAGTAGAAAAAAAT+AGG | - | chr6_1:98313002-98313021 | Msa0901580:intron | 25.0% |
| ! | AAAAAATTATGTTGGTACGT+TGG | - | chr6_1:98313049-98313068 | Msa0901580:intron | 25.0% |
| ! | AGTATCACAAAAATTGTTGT+CGG | - | chr6_1:98313158-98313177 | Msa0901580:intron | 25.0% |
| !! | AAAAAATGATGTTGGTAAGT+CGG | - | chr6_1:98313283-98313302 | Msa0901580:intron | 25.0% |
| ! | AGTATCACAAAAAATGATGT+TGG | - | chr6_1:98313392-98313411 | Msa0901580:intron | 25.0% |
| ! | AGTATCATAAAAAATGGTGT+TGG | - | chr6_1:98313513-98313532 | Msa0901580:intron | 25.0% |
| ! | TTCTTATTCCTTTATGTTCA+TGG | + | chr6_1:98313926-98313945 | None:intergenic | 25.0% |
| ! | TTGAAAATGCAAACAAAAGT+TGG | - | chr6_1:98314606-98314625 | Msa0901580:intron | 25.0% |
| !! | TTTTTAACCCTTAAAGCAAA+GGG | - | chr6_1:98314832-98314851 | Msa0901580:intron | 25.0% |
| !!! | GATTTCCTATTTTTAATTGC+TGG | - | chr6_1:98314873-98314892 | Msa0901580:intron | 25.0% |
| ! | GCAAAGACTTTCATAAATTA+AGG | + | chr6_1:98314907-98314926 | None:intergenic | 25.0% |
| !!! | CTTTTAAGGAAAATCTTATG+AGG | - | chr6_1:98314975-98314994 | Msa0901580:intron | 25.0% |
| !!! | CCAACTTTGATTTTTTCATT+TGG | + | chr6_1:98315489-98315508 | None:intergenic | 25.0% |
| ! | CCAAATGAAAAAATCAAAGT+TGG | - | chr6_1:98315486-98315505 | Msa0901580:intron | 25.0% |
| ! | AAAAAATCAAAGTTGGAATG+CGG | - | chr6_1:98315493-98315512 | Msa0901580:intron | 25.0% |
| !! | CCTTATTTATTTAGCACAAA+AGG | + | chr6_1:98315599-98315618 | None:intergenic | 25.0% |
| !! | CCTTTTGTGCTAAATAAATA+AGG | - | chr6_1:98315596-98315615 | Msa0901580:intron | 25.0% |
| !!! | GAGCAATAATTTTTTTCTTG+AGG | + | chr6_1:98315733-98315752 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTTTTTTGAGTGG+AGG | + | chr6_1:98315766-98315785 | None:intergenic | 25.0% |
| !!! | ATTGCTAATTTTGATTTTGG+TGG | - | chr6_1:98315875-98315894 | Msa0901580:intron | 25.0% |
| !!! | CATCCTCTAGAATAATAAAT+TGG | - | chr6_1:98316088-98316107 | Msa0901580:intron | 25.0% |
| ! | ATGCCAATTTATTATTCTAG+AGG | + | chr6_1:98316094-98316113 | None:intergenic | 25.0% |
| ! | AATAAAAGACAAACAAACCT+AGG | - | chr6_1:98316188-98316207 | Msa0901580:intron | 25.0% |
| !! | ATTCCATGTTTGATATGTTT+TGG | - | chr6_1:98316498-98316517 | Msa0901580:intron | 25.0% |
| !! | TTTTGAATGATATATGGGTT+AGG | - | chr6_1:98316561-98316580 | Msa0901580:intron | 25.0% |
| !! | TTTGAATGATATATGGGTTA+GGG | - | chr6_1:98316562-98316581 | Msa0901580:intron | 25.0% |
| !! | ACGTTTCTTCTAATTTTTGA+AGG | - | chr6_1:98316603-98316622 | Msa0901580:intron | 25.0% |
| !! | CGTTTCTTCTAATTTTTGAA+GGG | - | chr6_1:98316604-98316623 | Msa0901580:intron | 25.0% |
| ! | TGGATTTGACTATAAAGTTA+AGG | + | chr6_1:98316987-98317006 | None:intergenic | 25.0% |
| ! | ATGTAAAATGGAGTAAATGA+TGG | + | chr6_1:98317513-98317532 | None:intergenic | 25.0% |
| !! | ATTTACTCCATTTTACATGT+AGG | - | chr6_1:98317515-98317534 | Msa0901580:intron | 25.0% |
| ! | TGGAACATTATATCAAACAA+TGG | + | chr6_1:98317743-98317762 | None:intergenic | 25.0% |
| ! | AGTATTAATACCAAATTTGG+GGG | + | chr6_1:98317808-98317827 | None:intergenic | 25.0% |
| !!! | TGGTTTTTTTGTTACCATAA+TGG | - | chr6_1:98318120-98318139 | Msa0901580:intron | 25.0% |
| ! | AATCATATGAGATCATAAGA+AGG | + | chr6_1:98318166-98318185 | None:intergenic | 25.0% |
| ! | TTTGACTGATTGTTATGTTT+AGG | - | chr6_1:98318266-98318285 | Msa0901580:intron | 25.0% |
| ! | TGACAACATGTAACAATTAT+CGG | + | chr6_1:98318596-98318615 | None:intergenic | 25.0% |
| ! | TCAATTATTATCTCGTAAGT+TGG | - | chr6_1:98318700-98318719 | Msa0901580:intron | 25.0% |
| ! | TTTGGTAAACTTGAAAAACA+CGG | - | chr6_1:98318845-98318864 | Msa0901580:intron | 25.0% |
| !!! | AAAAGTTTTATGCATTAGTG+GGG | - | chr6_1:98319309-98319328 | Msa0901580:intron | 25.0% |
| !!! | ATTTACCTTATTTTGCAAGA+CGG | + | chr6_1:98319616-98319635 | None:intergenic | 25.0% |
| ! | TATTTGTTTGCATATATCGA+TGG | + | chr6_1:98319714-98319733 | None:intergenic | 25.0% |
| ! | TTTCTCTAGATATGGAATAT+TGG | - | chr6_1:98320077-98320096 | Msa0901580:CDS | 25.0% |
| ! | ATTTCACCATTACTAATATG+AGG | - | chr6_1:98320158-98320177 | Msa0901580:CDS | 25.0% |
| ! | AGGTCTCTATTAATATTGAA+AGG | - | chr6_1:98320178-98320197 | Msa0901580:CDS | 25.0% |
| ! | ACTTATCAGACAAATGTATT+TGG | - | chr6_1:98320277-98320296 | Msa0901580:CDS | 25.0% |
| !! | ATATTTTCTCTGTCTTTACA+TGG | + | chr6_1:98320352-98320371 | None:intergenic | 25.0% |
| ! | TAACGAAAAAAAGTAGACAA+CGG | - | chr6_1:98320649-98320668 | Msa0901580:CDS | 25.0% |
| !!! | GTTTCAGCTAAGTAATTTTT+TGG | - | chr6_1:98320960-98320979 | Msa0901580:CDS | 25.0% |
| !!! | TTCAGCTAAGTAATTTTTTG+GGG | - | chr6_1:98320962-98320981 | Msa0901580:CDS | 25.0% |
| ! | TGTGAAGAATGTAAAATTGT+CGG | + | chr6_1:98321137-98321156 | None:intergenic | 25.0% |
| !! | ACAATTTTACATTCTTCACA+CGG | - | chr6_1:98321137-98321156 | Msa0901580:intron | 25.0% |
| !! | GTTTTCCAATTGTTTATAGA+TGG | - | chr6_1:98321768-98321787 | Msa0901580:CDS | 25.0% |
| ! | AAACATATACAATATGGTCA+AGG | + | chr6_1:98321904-98321923 | None:intergenic | 25.0% |
| !! | TATGAAGTAAGTATTTTCTC+TGG | - | chr6_1:98322044-98322063 | Msa0901580:intron | 25.0% |
| ! | TAAAATTTGTGGAGTGAATT+TGG | - | chr6_1:98322590-98322609 | Msa0901580:intron | 25.0% |
| !! | GATGTTCCAATTTGCTATAA+TGG | - | chr6_1:98311795-98311814 | Msa0901580:CDS | 30.0% |
| AAGTGGATAATCACATATTC+AGG | + | chr6_1:98311830-98311849 | None:intergenic | 30.0% | |
| CATACATACAAGGTTTATGA+AGG | + | chr6_1:98311940-98311959 | None:intergenic | 30.0% | |
| TAATGTTAGCAATTGCTTTC+AGG | - | chr6_1:98312146-98312165 | Msa0901580:intron | 30.0% | |
| !! | AATTGCTTTCAGGTTCTTAT+TGG | - | chr6_1:98312156-98312175 | Msa0901580:intron | 30.0% |
| GAAAATATGGATCTACATAC+AGG | - | chr6_1:98312193-98312212 | Msa0901580:intron | 30.0% | |
| GTTCCCAATTGTTTATAGAT+GGG | - | chr6_1:98312455-98312474 | Msa0901580:CDS | 30.0% | |
| TTCAGTTGAACATGTATTGA+TGG | - | chr6_1:98312539-98312558 | Msa0901580:CDS | 30.0% | |
| !! | GTGATATTAATCTAGCTTTC+TGG | + | chr6_1:98312567-98312586 | None:intergenic | 30.0% |
| TGATATCAAGTCTTGCATTT+AGG | - | chr6_1:98312730-98312749 | Msa0901580:intron | 30.0% | |
| GATATCAAGTCTTGCATTTA+GGG | - | chr6_1:98312731-98312750 | Msa0901580:intron | 30.0% | |
| TAGAGACATTTGATTATGCA+TGG | - | chr6_1:98312885-98312904 | Msa0901580:intron | 30.0% | |
| GCATGGAACAAAGTTAATAA+CGG | - | chr6_1:98312902-98312921 | Msa0901580:intron | 30.0% | |
| GAGCATTTGAAGAATATCAT+TGG | + | chr6_1:98312939-98312958 | None:intergenic | 30.0% | |
| ! | TTCTACTTCATCTGATTTGT+CGG | + | chr6_1:98312996-98313015 | None:intergenic | 30.0% |
| !! | GACGAGAGTATCATAAAAAA+TGG | - | chr6_1:98313507-98313526 | Msa0901580:intron | 30.0% |
| AGTATCGCAAAAAATGATGT+TGG | - | chr6_1:98313747-98313766 | Msa0901580:intron | 30.0% | |
| AAAAAATGATGTTGGTACGT+CGG | - | chr6_1:98313755-98313774 | Msa0901580:intron | 30.0% | |
| CAAGATTTCTGATTTAGACT+TGG | + | chr6_1:98313982-98314001 | None:intergenic | 30.0% | |
| CAAGTCTAAATCAGAAATCT+TGG | - | chr6_1:98313980-98313999 | Msa0901580:intron | 30.0% | |
| AGTATCACCAAAAATGATGT+TGG | - | chr6_1:98314023-98314042 | Msa0901580:intron | 30.0% | |
| ! | CGTCTCCTTTAAAAAAGAAA+GGG | - | chr6_1:98314096-98314115 | Msa0901580:intron | 30.0% |
| !!! | CTCTTCCCTTTCTTTTTTAA+AGG | + | chr6_1:98314104-98314123 | None:intergenic | 30.0% |
| ! | CAACCTTTATGAAGATTTTG+AGG | - | chr6_1:98314235-98314254 | Msa0901580:intron | 30.0% |
| TTGCCTCAAAATCTTCATAA+AGG | + | chr6_1:98314241-98314260 | None:intergenic | 30.0% | |
| ACTAGCATCATGAAACATAT+TGG | + | chr6_1:98314282-98314301 | None:intergenic | 30.0% | |
| GTGGAGCTTAATAACAATTA+CGG | - | chr6_1:98314521-98314540 | Msa0901580:intron | 30.0% | |
| ! | CCATTACAAAAGCATAATCA+CGG | + | chr6_1:98314744-98314763 | None:intergenic | 30.0% |
| TGTCAGTTAAACTCTTGTAA+TGG | - | chr6_1:98314781-98314800 | Msa0901580:intron | 30.0% | |
| ! | GTTTTTAACCCTTAAAGCAA+AGG | - | chr6_1:98314831-98314850 | Msa0901580:intron | 30.0% |
| TATGAAAGTCTTTGCATACA+TGG | - | chr6_1:98314912-98314931 | Msa0901580:intron | 30.0% | |
| ATGAAAGTCTTTGCATACAT+GGG | - | chr6_1:98314913-98314932 | Msa0901580:intron | 30.0% | |
| ATAATGATACTTCCCTTCAT+AGG | - | chr6_1:98315025-98315044 | Msa0901580:intron | 30.0% | |
| TAATGATACTTCCCTTCATA+GGG | - | chr6_1:98315026-98315045 | Msa0901580:intron | 30.0% | |
| ! | CATAAGATTTTCCCTATGAA+GGG | + | chr6_1:98315040-98315059 | None:intergenic | 30.0% |
| ! | TCATAAGATTTTCCCTATGA+AGG | + | chr6_1:98315041-98315060 | None:intergenic | 30.0% |
| AACGATTATGAGGGTAAAAA+AGG | + | chr6_1:98315546-98315565 | None:intergenic | 30.0% | |
| TCGGTTCTCATAGTAAAAAT+AGG | + | chr6_1:98315984-98316003 | None:intergenic | 30.0% | |
| !! | ACATTTTAAGGAACTTGAAG+TGG | + | chr6_1:98316136-98316155 | None:intergenic | 30.0% |
| !! | TTTTGTTGTATGTGAATCCT+AGG | + | chr6_1:98316208-98316227 | None:intergenic | 30.0% |
| GATTCACATACAACAAAATC+TGG | - | chr6_1:98316210-98316229 | Msa0901580:intron | 30.0% | |
| AATTGTCTTCCTGAAATTCT+TGG | + | chr6_1:98316287-98316306 | None:intergenic | 30.0% | |
| TCACCAAAACATATCAAACA+TGG | + | chr6_1:98316504-98316523 | None:intergenic | 30.0% | |
| ATCATTCAAAACTGTATGCA+TGG | + | chr6_1:98316552-98316571 | None:intergenic | 30.0% | |
| TTACAAATTATAGCGTCAAG+TGG | + | chr6_1:98317155-98317174 | None:intergenic | 30.0% | |
| !! | TTCTACACTTGATTTTGAGT+TGG | - | chr6_1:98316861-98316880 | Msa0901580:intron | 30.0% |
| AAAATAAGCATGGATGAGAT+TGG | + | chr6_1:98317545-98317564 | None:intergenic | 30.0% | |
| TTGATATAATGTTCCAGACA+AGG | - | chr6_1:98317747-98317766 | Msa0901580:intron | 30.0% | |
| TGATATAATGTTCCAGACAA+GGG | - | chr6_1:98317748-98317767 | Msa0901580:intron | 30.0% | |
| GTATTAATACCAAATTTGGG+GGG | + | chr6_1:98317807-98317826 | None:intergenic | 30.0% | |
| ATCTTGACTAAATATGTTGG+GGG | + | chr6_1:98318022-98318041 | None:intergenic | 30.0% | |
| GATCTTGACTAAATATGTTG+GGG | + | chr6_1:98318023-98318042 | None:intergenic | 30.0% | |
| GGATCTTGACTAAATATGTT+GGG | + | chr6_1:98318024-98318043 | None:intergenic | 30.0% | |
| !!! | TTGAGGTTGAGGTTTTATTT+AGG | - | chr6_1:98318066-98318085 | Msa0901580:intron | 30.0% |
| !!! | TGAGGTTTTATTTAGGTTGT+TGG | - | chr6_1:98318073-98318092 | Msa0901580:intron | 30.0% |
| ATATGAGATCATAAGAAGGA+AGG | + | chr6_1:98318162-98318181 | None:intergenic | 30.0% | |
| GACAACATGTAACAATTATC+GGG | + | chr6_1:98318595-98318614 | None:intergenic | 30.0% | |
| !! | TATTTGTTTTCACGTATGTG+TGG | + | chr6_1:98318937-98318956 | None:intergenic | 30.0% |
| TTCAAATCTAATTCACTCAC+TGG | + | chr6_1:98319129-98319148 | None:intergenic | 30.0% | |
| GATAATGTATGTGTATTGCT+TGG | - | chr6_1:98319465-98319484 | Msa0901580:intron | 30.0% | |
| AAATGTTATGTTTCCTTACC+AGG | + | chr6_1:98319494-98319513 | None:intergenic | 30.0% | |
| GCTCCCATATATAATGAATA+AGG | + | chr6_1:98319874-98319893 | None:intergenic | 30.0% | |
| TGTAAGCATTTCTCTAGATA+TGG | - | chr6_1:98320069-98320088 | Msa0901580:CDS | 30.0% | |
| TTGACAAAGATATGGAGTAT+TGG | - | chr6_1:98320108-98320127 | Msa0901580:CDS | 30.0% | |
| TAGAGACCTCATATTAGTAA+TGG | + | chr6_1:98320167-98320186 | None:intergenic | 30.0% | |
| ! | GAAAGGTCAAATGTCTTTTA+AGG | - | chr6_1:98320195-98320214 | Msa0901580:CDS | 30.0% |
| !!! | ATGCAACATTTTCAAGTTTC+AGG | + | chr6_1:98320425-98320444 | None:intergenic | 30.0% |
| ATAGTTATTGGTGTAAGCTT+GGG | + | chr6_1:98320456-98320475 | None:intergenic | 30.0% | |
| ATCCATCATCATAATACACT+TGG | - | chr6_1:98320525-98320544 | Msa0901580:CDS | 30.0% | |
| !!! | GATATTATGAAAGGGCATTT+TGG | - | chr6_1:98320573-98320592 | Msa0901580:CDS | 30.0% |
| CATGCATGTATGTATGTATT+CGG | + | chr6_1:98321288-98321307 | None:intergenic | 30.0% | |
| ! | TAGGAAAAGCTGATAATGTA+AGG | - | chr6_1:98321633-98321652 | Msa0901580:intron | 30.0% |
| CTTCATTTCTACCATAACAT+TGG | + | chr6_1:98321667-98321686 | None:intergenic | 30.0% | |
| ATTTGAATCTTCTCACCAAA+AGG | - | chr6_1:98321712-98321731 | Msa0901580:CDS | 30.0% | |
| TTTGAATCTTCTCACCAAAA+GGG | - | chr6_1:98321713-98321732 | Msa0901580:CDS | 30.0% | |
| TTTCATGAGATCTTTCTTCA+AGG | - | chr6_1:98321746-98321765 | Msa0901580:CDS | 30.0% | |
| AATGCATAGAATGTACTTAC+AGG | + | chr6_1:98321797-98321816 | None:intergenic | 30.0% | |
| !! | TCAACTTGTTAAGATCAAGA+TGG | - | chr6_1:98321831-98321850 | Msa0901580:CDS | 30.0% |
| TAAGAGCTAAGTTATAGGTT+TGG | - | chr6_1:98321994-98322013 | Msa0901580:intron | 30.0% | |
| TGAGTACATTTGATTATGCT+TGG | - | chr6_1:98322283-98322302 | Msa0901580:intron | 30.0% | |
| GCTTGGAACACAATTAATAA+CGG | - | chr6_1:98322300-98322319 | Msa0901580:intron | 30.0% | |
| ATGCTCAACAAAATATCTTC+CGG | - | chr6_1:98322351-98322370 | Msa0901580:intron | 30.0% | |
| GGCAACATACTTGATTTAAT+TGG | + | chr6_1:98322441-98322460 | None:intergenic | 30.0% | |
| !! | TCGGATTTGTTATCTTTCAT+AGG | + | chr6_1:98322462-98322481 | None:intergenic | 30.0% |
| GTTGTATCTTGAACTATCTT+AGG | + | chr6_1:98322546-98322565 | None:intergenic | 30.0% | |
| ! | AATTTTACCACTCTTCTCAA+CGG | + | chr6_1:98322577-98322596 | None:intergenic | 30.0% |
| !! | ATGATTCTAGCTTCTCTCAT+TGG | - | chr6_1:98311401-98311420 | Msa0901580:CDS | 35.0% |
| TGATGTTGTAGTGCTTGAAA+TGG | - | chr6_1:98311661-98311680 | Msa0901580:CDS | 35.0% | |
| GATGTTGTAGTGCTTGAAAT+GGG | - | chr6_1:98311662-98311681 | Msa0901580:CDS | 35.0% | |
| ATGTTGTAGTGCTTGAAATG+GGG | - | chr6_1:98311663-98311682 | Msa0901580:CDS | 35.0% | |
| TCAATCAGCATATAAGTGAG+AGG | - | chr6_1:98311725-98311744 | Msa0901580:CDS | 35.0% | |
| GAGCAACCATTATAGCAAAT+TGG | + | chr6_1:98311804-98311823 | None:intergenic | 35.0% | |
| !!! | GTGTTTTAGCAAATGCCTAT+AGG | - | chr6_1:98311896-98311915 | Msa0901580:intron | 35.0% |
| TTCTTATTGGTCCTTCTGAT+TGG | - | chr6_1:98312169-98312188 | Msa0901580:intron | 35.0% | |
| TCTTATTGGTCCTTCTGATT+GGG | - | chr6_1:98312170-98312189 | Msa0901580:intron | 35.0% | |
| GGTTCCCAATTGTTTATAGA+TGG | - | chr6_1:98312454-98312473 | Msa0901580:CDS | 35.0% | |
| CAGCCCATCTATAAACAATT+GGG | + | chr6_1:98312461-98312480 | None:intergenic | 35.0% | |
| ATGTTCTGTTAGGTACGTAA+TGG | + | chr6_1:98312652-98312671 | None:intergenic | 35.0% | |
| TACTTTACAAGCTTCACCAT+CGG | + | chr6_1:98312852-98312871 | None:intergenic | 35.0% | |
| AAATTATGTTGGTACGTTGG+AGG | - | chr6_1:98313052-98313071 | Msa0901580:intron | 35.0% | |
| AAAAATTGTTGTCGGTACGT+CGG | - | chr6_1:98313166-98313185 | Msa0901580:intron | 35.0% | |
| ATTTAACATCTGTGAGCTGA+TGG | + | chr6_1:98313334-98313353 | None:intergenic | 35.0% | |
| AAATGATGTTGGTATGTCAG+TGG | - | chr6_1:98313403-98313422 | Msa0901580:intron | 35.0% | |
| AAATGATATTGGTACGTCAG+AGG | - | chr6_1:98313641-98313660 | Msa0901580:intron | 35.0% | |
| ! | CGTCTCCTTTAAAGAAGAAA+GGG | - | chr6_1:98313820-98313839 | Msa0901580:intron | 35.0% |
| CTCTTCCCTTTCTTCTTTAA+AGG | + | chr6_1:98313828-98313847 | None:intergenic | 35.0% | |
| AAGAAAGGGAAGAGTGATAA+AGG | - | chr6_1:98313834-98313853 | Msa0901580:intron | 35.0% | |
| ! | CTTACTCTTTTCTCAACTAG+TGG | + | chr6_1:98313900-98313919 | None:intergenic | 35.0% |
| TCTAAATCAGAAATCTTGGC+TGG | - | chr6_1:98313984-98314003 | Msa0901580:intron | 35.0% | |
| CTAAATCAGAAATCTTGGCT+GGG | - | chr6_1:98313985-98314004 | Msa0901580:intron | 35.0% | |
| !!! | CATCATTTTTGGTGATACTC+TGG | + | chr6_1:98314022-98314041 | None:intergenic | 35.0% |
| ! | AGACGTACCAACATCATTTT+TGG | + | chr6_1:98314033-98314052 | None:intergenic | 35.0% |
| ! | GCGTCTCCTTTAAAAAAGAA+AGG | - | chr6_1:98314095-98314114 | Msa0901580:intron | 35.0% |
| AAGAAAGGGAAGAGTGATAA+AGG | - | chr6_1:98313834-98313853 | Msa0901580:intron | 35.0% | |
| !!! | ATGAAGATTTTGAGGCAACA+AGG | - | chr6_1:98314243-98314262 | Msa0901580:intron | 35.0% |
| CTGTAAAATCGAATGCAGAT+AGG | - | chr6_1:98314357-98314376 | Msa0901580:intron | 35.0% | |
| !! | TAACAATTACGGTGCCATAA+AGG | - | chr6_1:98314532-98314551 | Msa0901580:intron | 35.0% |
| !! | AACAATTACGGTGCCATAAA+GGG | - | chr6_1:98314533-98314552 | Msa0901580:intron | 35.0% |
| ! | AAGATTACCGAGTTGAAAGA+GGG | - | chr6_1:98314581-98314600 | Msa0901580:intron | 35.0% |
| AAATGCAAACAAAAGTTGGC+TGG | - | chr6_1:98314610-98314629 | Msa0901580:intron | 35.0% | |
| AATGCAAACAAAAGTTGGCT+GGG | - | chr6_1:98314611-98314630 | Msa0901580:intron | 35.0% | |
| TGTCGTCATTCAAGATTGTT+CGG | - | chr6_1:98314697-98314716 | Msa0901580:intron | 35.0% | |
| ! | CCGTGATTATGCTTTTGTAA+TGG | - | chr6_1:98314741-98314760 | Msa0901580:intron | 35.0% |
| AGGAAATCCCTTTGCTTTAA+GGG | + | chr6_1:98314842-98314861 | None:intergenic | 35.0% | |
| AAGGAAATCCCTTTGCTTTA+AGG | + | chr6_1:98314843-98314862 | None:intergenic | 35.0% | |
| TGAAATTGCTTCCCTTCAAA+AGG | - | chr6_1:98315058-98315077 | Msa0901580:intron | 35.0% | |
| GAAATTGCTTCCCTTCAAAA+GGG | - | chr6_1:98315059-98315078 | Msa0901580:intron | 35.0% | |
| ! | AGTAAGACTTCCCTTTTGAA+GGG | + | chr6_1:98315072-98315091 | None:intergenic | 35.0% |
| TGTAAAACTTCCCCTTTGAA+GGG | + | chr6_1:98315134-98315153 | None:intergenic | 35.0% | |
| ATGTAAAACTTCCCCTTTGA+AGG | + | chr6_1:98315135-98315154 | None:intergenic | 35.0% | |
| ! | ACATGTTGCTTACCTTCATA+AGG | - | chr6_1:98315151-98315170 | Msa0901580:intron | 35.0% |
| ! | CATGTTGCTTACCTTCATAA+GGG | - | chr6_1:98315152-98315171 | Msa0901580:intron | 35.0% |
| ! | CGTAAGACTTCTTTTGTGAA+TGG | + | chr6_1:98315196-98315215 | None:intergenic | 35.0% |
| TTCACAAAAGAAGTCTTACG+AGG | - | chr6_1:98315196-98315215 | Msa0901580:intron | 35.0% | |
| TCACTTGTGAACGATTATGA+GGG | + | chr6_1:98315555-98315574 | None:intergenic | 35.0% | |
| !!! | TTTCTTTTTTGAGTGGAGGT+GGG | + | chr6_1:98315762-98315781 | None:intergenic | 35.0% |
| !!! | TTTTCTTTTTTGAGTGGAGG+TGG | + | chr6_1:98315763-98315782 | None:intergenic | 35.0% |
| TCACATACAACAAAATCTGG+AGG | - | chr6_1:98316213-98316232 | Msa0901580:intron | 35.0% | |
| AAGCAAGGAACAAAAGACTT+GGG | + | chr6_1:98316476-98316495 | None:intergenic | 35.0% | |
| AAAGCAAGGAACAAAAGACT+TGG | + | chr6_1:98316477-98316496 | None:intergenic | 35.0% | |
| TCAAACATGGAATGAAAGCA+AGG | + | chr6_1:98316491-98316510 | None:intergenic | 35.0% | |
| TTGGGTGTATTGTGTAAAAG+TGG | + | chr6_1:98316789-98316808 | None:intergenic | 35.0% | |
| TTGGGTGTATTGTGTAAAAG+TGG | + | chr6_1:98316789-98316808 | None:intergenic | 35.0% | |
| TTGGGTGTATTGTGTAAAAG+TGG | + | chr6_1:98316789-98316808 | None:intergenic | 35.0% | |
| TGATGAAGTGAAAACAACCA+TGG | + | chr6_1:98317620-98317639 | None:intergenic | 35.0% | |
| GATATAATGTTCCAGACAAG+GGG | - | chr6_1:98317749-98317768 | Msa0901580:intron | 35.0% | |
| ATATAATGTTCCAGACAAGG+GGG | - | chr6_1:98317750-98317769 | Msa0901580:intron | 35.0% | |
| ! | TAATTTTGCTTGTGTCACAG+TGG | - | chr6_1:98317849-98317868 | Msa0901580:intron | 35.0% |
| !!! | TGAAGGCATTTTGCACTAAA+AGG | - | chr6_1:98317876-98317895 | Msa0901580:intron | 35.0% |
| TGTACTCAAATACCAACTCA+TGG | + | chr6_1:98317922-98317941 | None:intergenic | 35.0% | |
| ACACAAACTATTATGTGGTG+TGG | + | chr6_1:98317953-98317972 | None:intergenic | 35.0% | |
| CGGATCTTGACTAAATATGT+TGG | + | chr6_1:98318025-98318044 | None:intergenic | 35.0% | |
| !! | TTTTCTTTTGACTGTTGGGA+CGG | - | chr6_1:98318209-98318228 | Msa0901580:intron | 35.0% |
| ! | CAGATCAACGATTTTCCATT+TGG | + | chr6_1:98318377-98318396 | None:intergenic | 35.0% |
| GTAAACTTGAAAAACACGGT+AGG | - | chr6_1:98318849-98318868 | Msa0901580:intron | 35.0% | |
| CTAATTCACTCACTGGAAAA+TGG | + | chr6_1:98319122-98319141 | None:intergenic | 35.0% | |
| ATGGTGGTCAACAAAATCAA+TGG | - | chr6_1:98319752-98319771 | Msa0901580:CDS | 35.0% | |
| TTAATACAATTGTGTCCCCT+AGG | - | chr6_1:98319810-98319829 | Msa0901580:CDS | 35.0% | |
| ACAATGTATTGAGTCCATGA+AGG | - | chr6_1:98319842-98319861 | Msa0901580:CDS | 35.0% | |
| CAATGTATTGAGTCCATGAA+GGG | - | chr6_1:98319843-98319862 | Msa0901580:CDS | 35.0% | |
| TTTGGACACACTCACATAAA+TGG | - | chr6_1:98319929-98319948 | Msa0901580:CDS | 35.0% | |
| GGTCCAATGACGAATAATTT+CGG | - | chr6_1:98320298-98320317 | Msa0901580:CDS | 35.0% | |
| GTACCGAAATTATTCGTCAT+TGG | + | chr6_1:98320304-98320323 | None:intergenic | 35.0% | |
| TCATTAGTAGACGGTGAAAT+TGG | + | chr6_1:98320326-98320345 | None:intergenic | 35.0% | |
| AATTTCACCGTCTACTAATG+AGG | - | chr6_1:98320325-98320344 | Msa0901580:CDS | 35.0% | |
| CATAGTTATTGGTGTAAGCT+TGG | + | chr6_1:98320457-98320476 | None:intergenic | 35.0% | |
| CTCCAAGTGTATTATGATGA+TGG | + | chr6_1:98320530-98320549 | None:intergenic | 35.0% | |
| CATCATCATAATACACTTGG+AGG | - | chr6_1:98320528-98320547 | Msa0901580:CDS | 35.0% | |
| ATCATAATACACTTGGAGGT+TGG | - | chr6_1:98320532-98320551 | Msa0901580:CDS | 35.0% | |
| !!! | TGAAAGGGCATTTTGGTAAA+TGG | - | chr6_1:98320580-98320599 | Msa0901580:CDS | 35.0% |
| !! | ATGATTCTAGCTTCGTTCAT+TGG | - | chr6_1:98320751-98320770 | Msa0901580:CDS | 35.0% |
| TTCTTATTGGTCCTTCTGAT+TGG | - | chr6_1:98312169-98312188 | Msa0901580:intron | 35.0% | |
| TCTTATTGGTCCTTCTGATT+GGG | - | chr6_1:98312170-98312189 | Msa0901580:intron | 35.0% | |
| GAATAATCTTCCCAATCAGA+AGG | + | chr6_1:98321455-98321474 | None:intergenic | 35.0% | |
| GATTGGGAAGATTATTCCAA+AGG | - | chr6_1:98321458-98321477 | Msa0901580:intron | 35.0% | |
| GGAAGATTATTCCAAAGGAA+AGG | - | chr6_1:98321463-98321482 | Msa0901580:intron | 35.0% | |
| GATTATTCCAAAGGAAAGGA+AGG | - | chr6_1:98321467-98321486 | Msa0901580:intron | 35.0% | |
| TGGTAGAAATGAAGCTCATT+TGG | - | chr6_1:98321673-98321692 | Msa0901580:CDS | 35.0% | |
| GGTAGAAATGAAGCTCATTT+GGG | - | chr6_1:98321674-98321693 | Msa0901580:CDS | 35.0% | |
| AATGAAGCTCATTTGGGAAA+TGG | - | chr6_1:98321680-98321699 | Msa0901580:CDS | 35.0% | |
| ATACAATATGGTCAAGGCAA+TGG | + | chr6_1:98321898-98321917 | None:intergenic | 35.0% | |
| AGTTATAGGTTTGGAAGTCT+AGG | - | chr6_1:98322003-98322022 | Msa0901580:intron | 35.0% | |
| ACACAATTAATAACGGTCCA+CGG | - | chr6_1:98322307-98322326 | Msa0901580:intron | 35.0% | |
| AGCATTTCAAGAATATCACC+GGG | + | chr6_1:98322336-98322355 | None:intergenic | 35.0% | |
| GAGCATTTCAAGAATATCAC+CGG | + | chr6_1:98322337-98322356 | None:intergenic | 35.0% | |
| ATCTGAAAATGTTCTTGTGC+CGG | + | chr6_1:98322373-98322392 | None:intergenic | 35.0% | |
| !! | CCTACTTTCTTTTGAGTGAA+GGG | + | chr6_1:98322414-98322433 | None:intergenic | 35.0% |
| CCTTCACTCAAAAGAAAGTA+GGG | - | chr6_1:98322412-98322431 | Msa0901580:intron | 35.0% | |
| TGAATTTGAACATGCGAGAT+AGG | + | chr6_1:98322512-98322531 | None:intergenic | 35.0% | |
| GAGAAGAGTGGTAAAATTTG+TGG | - | chr6_1:98322579-98322598 | Msa0901580:intron | 35.0% | |
| TTCTATTTGTACAAAGACGC+CGG | - | chr6_1:98322620-98322639 | Msa0901580:intron | 35.0% | |
| ! | GTTAGGTGTCATGAACATAA+AGG | - | chr6_1:98322654-98322673 | Msa0901580:intron | 35.0% |
| TCCAAGTCAGAATCAAAAAG+AGG | - | chr6_1:98322693-98322712 | Msa0901580:intron | 35.0% | |
| !! | TCCTCTTTTTGATTCTGACT+TGG | + | chr6_1:98322697-98322716 | None:intergenic | 35.0% |
| CAAAAAGAGGAAATGCTTGT+CGG | - | chr6_1:98322706-98322725 | Msa0901580:intron | 35.0% | |
| !! | TTCTAGCTTCTCTCATTGGA+AGG | - | chr6_1:98311405-98311424 | Msa0901580:CDS | 40.0% |
| TGATACGCTAAATGCACGAA+TGG | - | chr6_1:98312093-98312112 | Msa0901580:intron | 40.0% | |
| CTTATTGGTCCTTCTGATTG+GGG | - | chr6_1:98312171-98312190 | Msa0901580:intron | 40.0% | |
| ! | CCATATTTTCCCCAATCAGA+AGG | + | chr6_1:98312183-98312202 | None:intergenic | 40.0% |
| CCTTCTGATTGGGGAAAATA+TGG | - | chr6_1:98312180-98312199 | Msa0901580:intron | 40.0% | |
| CTGCCACAAAATTTCAGTGT+GGG | - | chr6_1:98312225-98312244 | Msa0901580:intron | 40.0% | |
| ! | ACTCCCACACTGAAATTTTG+TGG | + | chr6_1:98312231-98312250 | None:intergenic | 40.0% |
| ! | GTTCGTCGACTAGTGATTTA+GGG | - | chr6_1:98312268-98312287 | Msa0901580:intron | 40.0% |
| CGCGTAGTAGTGGTTTATAT+TGG | - | chr6_1:98312324-98312343 | Msa0901580:intron | 40.0% | |
| TTGGGTGATAATTGTGCATC+AGG | - | chr6_1:98312402-98312421 | Msa0901580:CDS | 40.0% | |
| GCAGCCCATCTATAAACAAT+TGG | + | chr6_1:98312462-98312481 | None:intergenic | 40.0% | |
| ATTTGTCGTCTTCAAGCTGA+TGG | + | chr6_1:98313100-98313119 | None:intergenic | 40.0% | |
| ! | AAATGATGTTGGTAAGTCGG+AGG | - | chr6_1:98313286-98313305 | Msa0901580:intron | 40.0% |
| ! | GCGTCTCCTTTAAAGAAGAA+AGG | - | chr6_1:98313819-98313838 | Msa0901580:intron | 40.0% |
| GTAAGCTGCCATGAACATAA+AGG | - | chr6_1:98313915-98313934 | Msa0901580:intron | 40.0% | |
| !!! | TGATGTGGTTTTGGAAGCTA+AGG | - | chr6_1:98314052-98314071 | Msa0901580:intron | 40.0% |
| ATCAAAGTTCCTGTTCCACA+AGG | + | chr6_1:98314189-98314208 | None:intergenic | 40.0% | |
| TATTTCTTGCTTTCGCTCTG+TGG | - | chr6_1:98314301-98314320 | Msa0901580:intron | 40.0% | |
| AGAACGAAGACTTGAAGTTG+AGG | - | chr6_1:98314390-98314409 | Msa0901580:intron | 40.0% | |
| GAACGAAGACTTGAAGTTGA+GGG | - | chr6_1:98314391-98314410 | Msa0901580:intron | 40.0% | |
| GAAGTTGAGGGTTAAAACCT+TGG | - | chr6_1:98314403-98314422 | Msa0901580:intron | 40.0% | |
| GGATGAGAAAAAGAAAGCTG+AGG | - | chr6_1:98314469-98314488 | Msa0901580:intron | 40.0% | |
| !! | ACAATTACGGTGCCATAAAG+GGG | - | chr6_1:98314534-98314553 | Msa0901580:intron | 40.0% |
| ! | GAAGATTACCGAGTTGAAAG+AGG | - | chr6_1:98314580-98314599 | Msa0901580:intron | 40.0% |
| TTCAACACCCTCTTTCAACT+CGG | + | chr6_1:98314591-98314610 | None:intergenic | 40.0% | |
| ACAAAAGTTGGCTGGGAATA+TGG | - | chr6_1:98314618-98314637 | Msa0901580:intron | 40.0% | |
| TTGGCTGGGAATATGGAAAA+AGG | - | chr6_1:98314625-98314644 | Msa0901580:intron | 40.0% | |
| TGGCTGGGAATATGGAAAAA+GGG | - | chr6_1:98314626-98314645 | Msa0901580:intron | 40.0% | |
| GACGACTTAGATCAAGATCT+AGG | + | chr6_1:98314677-98314696 | None:intergenic | 40.0% | |
| GTCGTCATTCAAGATTGTTC+GGG | - | chr6_1:98314698-98314717 | Msa0901580:intron | 40.0% | |
| ATTCAAGATTGTTCGGGATG+AGG | - | chr6_1:98314704-98314723 | Msa0901580:intron | 40.0% | |
| ! | ACTCTTGTAATGGCCTTTTG+AGG | - | chr6_1:98314791-98314810 | Msa0901580:intron | 40.0% |
| ! | CAGTAAGACTTCCCTTTTGA+AGG | + | chr6_1:98315073-98315092 | None:intergenic | 40.0% |
| CTTCAAAAGGGAAGTCTTAC+TGG | - | chr6_1:98315071-98315090 | Msa0901580:intron | 40.0% | |
| ! | TACTGGTTGTTTCCCTTCAA+AGG | - | chr6_1:98315088-98315107 | Msa0901580:intron | 40.0% |
| ! | ACTGGTTGTTTCCCTTCAAA+GGG | - | chr6_1:98315089-98315108 | Msa0901580:intron | 40.0% |
| CTGTAAGACTTCCCTTATGA+AGG | + | chr6_1:98315166-98315185 | None:intergenic | 40.0% | |
| CTTCATAAGGGAAGTCTTAC+AGG | - | chr6_1:98315164-98315183 | Msa0901580:intron | 40.0% | |
| GTCACTTGTGAACGATTATG+AGG | + | chr6_1:98315556-98315575 | None:intergenic | 40.0% | |
| AAGGGTCATGACAACTTGTA+CGG | - | chr6_1:98315642-98315661 | Msa0901580:intron | 40.0% | |
| ! | GCACACATTACCGTTCTTTT+GGG | - | chr6_1:98315664-98315683 | Msa0901580:intron | 40.0% |
| TCTTTGCACTCCCAAAAGAA+CGG | + | chr6_1:98315677-98315696 | None:intergenic | 40.0% | |
| !!! | TTCTTTTTTGAGTGGAGGTG+GGG | + | chr6_1:98315761-98315780 | None:intergenic | 40.0% |
| ATCCTTAACGTGAGTCATCA+GGG | + | chr6_1:98316029-98316048 | None:intergenic | 40.0% | |
| AATCCTTAACGTGAGTCATC+AGG | + | chr6_1:98316030-98316049 | None:intergenic | 40.0% | |
| ! | TGCTGTTAGGGCACATTTTA+AGG | + | chr6_1:98316148-98316167 | None:intergenic | 40.0% |
| ! | AATGCTACCTTGTGCTGTTA+GGG | + | chr6_1:98316160-98316179 | None:intergenic | 40.0% |
| ! | AAATGCTACCTTGTGCTGTT+AGG | + | chr6_1:98316161-98316180 | None:intergenic | 40.0% |
| CAATATCCTTGACACGCTTT+AGG | - | chr6_1:98316335-98316354 | Msa0901580:intron | 40.0% | |
| !!! | CACTTGATTTTGAGTTGCTC+TGG | - | chr6_1:98316866-98316885 | Msa0901580:intron | 40.0% |
| !!! | CACTTGATTTTGAGTTGCTC+TGG | - | chr6_1:98316866-98316885 | Msa0901580:intron | 40.0% |
| !! | TGGCTAGCCTACATGTAAAA+TGG | + | chr6_1:98317525-98317544 | None:intergenic | 40.0% |
| TGTGTCACAGTGGAAATTGA+AGG | - | chr6_1:98317859-98317878 | Msa0901580:intron | 40.0% | |
| CAAATACCAACTCATGGCAA+AGG | + | chr6_1:98317916-98317935 | None:intergenic | 40.0% | |
| CAAACTATTATGTGGTGTGG+CGG | + | chr6_1:98317950-98317969 | None:intergenic | 40.0% | |
| ! | AACCTCAAATCTGAAACCAG+TGG | + | chr6_1:98318048-98318067 | None:intergenic | 40.0% |
| ! | TGGTTTCAGATTTGAGGTTG+AGG | - | chr6_1:98318049-98318068 | Msa0901580:intron | 40.0% |
| !! | TTTCTTTTGACTGTTGGGAC+GGG | - | chr6_1:98318210-98318229 | Msa0901580:intron | 40.0% |
| GGTTATCCTTCTGCTTTCTT+CGG | + | chr6_1:98318574-98318593 | None:intergenic | 40.0% | |
| ATGTGTATTGCTTGGATACC+TGG | - | chr6_1:98319473-98319492 | Msa0901580:intron | 40.0% | |
| TATTGCTTGGATACCTGGTA+AGG | - | chr6_1:98319478-98319497 | Msa0901580:intron | 40.0% | |
| TTCCACCGTCTTGCAAAATA+AGG | - | chr6_1:98319608-98319627 | Msa0901580:CDS | 40.0% | |
| !!! | TACCTTATTTTGCAAGACGG+TGG | + | chr6_1:98319613-98319632 | None:intergenic | 40.0% |
| ! | ACATTGTGTGGTTAGTCCTA+GGG | + | chr6_1:98319829-98319848 | None:intergenic | 40.0% |
| ! | TACATTGTGTGGTTAGTCCT+AGG | + | chr6_1:98319830-98319849 | None:intergenic | 40.0% |
| CATGGACTCAATACATTGTG+TGG | + | chr6_1:98319841-98319860 | None:intergenic | 40.0% | |
| GAATAAGGTCAATCCCTTCA+TGG | + | chr6_1:98319859-98319878 | None:intergenic | 40.0% | |
| ACATGGACCTCATTAGTAGA+CGG | + | chr6_1:98320335-98320354 | None:intergenic | 40.0% | |
| AACATTTGTGTCGTGTCTCA+TGG | + | chr6_1:98320702-98320721 | None:intergenic | 40.0% | |
| !! | TTCTAGCTTCGTTCATTGGA+AGG | - | chr6_1:98320755-98320774 | Msa0901580:CDS | 40.0% |
| !! | CGAATTTTCTGGTAGGTTGT+GGG | + | chr6_1:98321510-98321529 | None:intergenic | 40.0% |
| CCACAACCTACCAGAAAATT+CGG | - | chr6_1:98321508-98321527 | Msa0901580:intron | 40.0% | |
| CACAACCTACCAGAAAATTC+GGG | - | chr6_1:98321509-98321528 | Msa0901580:intron | 40.0% | |
| !! | ATCTGTGTTGACTAGCAGTT+TGG | - | chr6_1:98321556-98321575 | Msa0901580:intron | 40.0% |
| !! | TCTGTGTTGACTAGCAGTTT+GGG | - | chr6_1:98321557-98321576 | Msa0901580:intron | 40.0% |
| CGAGTAGTTGTGGTTTATCT+AGG | - | chr6_1:98321614-98321633 | Msa0901580:intron | 40.0% | |
| AGGACAAGACTCCAATGTTA+TGG | - | chr6_1:98321653-98321672 | Msa0901580:CDS | 40.0% | |
| AATCTTCTCACCAAAAGGGA+CGG | - | chr6_1:98321717-98321736 | Msa0901580:CDS | 40.0% | |
| GGAGCCCATCTATAAACAAT+TGG | + | chr6_1:98321776-98321795 | None:intergenic | 40.0% | |
| TGTTGAACAGATGCAAACCA+AGG | - | chr6_1:98322230-98322249 | Msa0901580:intron | 40.0% | |
| GTTGAACAGATGCAAACCAA+GGG | - | chr6_1:98322231-98322250 | Msa0901580:intron | 40.0% | |
| CAGTTGAGATTCTGTTTGCA+AGG | + | chr6_1:98322262-98322281 | None:intergenic | 40.0% | |
| AGTGAAGGGTAGAAGTGATT+TGG | + | chr6_1:98322400-98322419 | None:intergenic | 40.0% | |
| CCCTTCACTCAAAAGAAAGT+AGG | - | chr6_1:98322411-98322430 | Msa0901580:intron | 40.0% | |
| !! | CCCTACTTTCTTTTGAGTGA+AGG | + | chr6_1:98322415-98322434 | None:intergenic | 40.0% |
| AAATCCGATGAAGCAGACAA+TGG | - | chr6_1:98322474-98322493 | Msa0901580:intron | 40.0% | |
| CTCGCATGTTCAAATTCAAC+CGG | - | chr6_1:98322514-98322533 | Msa0901580:intron | 40.0% | |
| ! | GATTTTTCCGTTGAGAAGAG+TGG | - | chr6_1:98322567-98322586 | Msa0901580:intron | 40.0% |
| !!! | CACCTAACTCTTTTTTCGAC+CGG | + | chr6_1:98322642-98322661 | None:intergenic | 40.0% |
| TCGTGCATTTAGCGTATCAG+TGG | + | chr6_1:98312092-98312111 | None:intergenic | 45.0% | |
| ! | CCACACTGAAATTTTGTGGC+AGG | + | chr6_1:98312227-98312246 | None:intergenic | 45.0% |
| CCTGCCACAAAATTTCAGTG+TGG | - | chr6_1:98312224-98312243 | Msa0901580:intron | 45.0% | |
| ! | GGTTCGTCGACTAGTGATTT+AGG | - | chr6_1:98312267-98312286 | Msa0901580:intron | 45.0% |
| AAACCACTACTACGCGATGA+GGG | + | chr6_1:98312320-98312339 | None:intergenic | 45.0% | |
| TAAACCACTACTACGCGATG+AGG | + | chr6_1:98312321-98312340 | None:intergenic | 45.0% | |
| CTCCAAAGTTATGGCAGAGA+TGG | - | chr6_1:98312372-98312391 | Msa0901580:CDS | 45.0% | |
| CTCCATCTCTGCCATAACTT+TGG | + | chr6_1:98312377-98312396 | None:intergenic | 45.0% | |
| CAAAGTTATGGCAGAGATGG+AGG | - | chr6_1:98312375-98312394 | Msa0901580:CDS | 45.0% | |
| ! | TCTGATTTGTCGGCTGTCAT+AGG | + | chr6_1:98312986-98313005 | None:intergenic | 45.0% |
| TTATGTTGGTACGTTGGAGG+TGG | - | chr6_1:98313055-98313074 | Msa0901580:intron | 45.0% | |
| ! | ATTTTTCGTCTGCGAGCTGA+TGG | + | chr6_1:98313217-98313236 | None:intergenic | 45.0% |
| TGATGTTGGTATGTCAGTGG+TGG | - | chr6_1:98313406-98313425 | Msa0901580:intron | 45.0% | |
| !! | CATTTGATTTGTCGTCTGCG+AGG | + | chr6_1:98313461-98313480 | None:intergenic | 45.0% |
| !! | AAATGGTGTTGGTACGTCAG+AGG | - | chr6_1:98313524-98313543 | Msa0901580:intron | 45.0% |
| !!! | AGAGGTGGTTTTGGAAGATG+AGG | - | chr6_1:98313542-98313561 | Msa0901580:intron | 45.0% |
| ! | AGAGGTGACTTTGGAAGTTG+AGG | - | chr6_1:98313659-98313678 | Msa0901580:intron | 45.0% |
| ! | ATTTTTCGTCTGCGAGCTGA+TGG | + | chr6_1:98313217-98313236 | None:intergenic | 45.0% |
| AAATGATGTTGGTACGTCGG+AGG | - | chr6_1:98313758-98313777 | Msa0901580:intron | 45.0% | |
| TGATGTTGGTACGTCTGATG+TGG | - | chr6_1:98314037-98314056 | Msa0901580:intron | 45.0% | |
| ! | TGGTACGTCTGATGTGGTTT+TGG | - | chr6_1:98314043-98314062 | Msa0901580:intron | 45.0% |
| GCTAAGGTTGACCATCAACT+CGG | - | chr6_1:98314068-98314087 | Msa0901580:intron | 45.0% | |
| AACAGGAACTTTGATCGTGC+TGG | - | chr6_1:98314194-98314213 | Msa0901580:intron | 45.0% | |
| !! | TGTGGTGTTGCTTGAAGTGA+TGG | - | chr6_1:98314319-98314338 | Msa0901580:intron | 45.0% |
| ! | AGTGATGGAGGAAGAGTTTC+AGG | - | chr6_1:98314334-98314353 | Msa0901580:intron | 45.0% |
| GAATGCAGATAGGCTAAAGC+AGG | - | chr6_1:98314367-98314386 | Msa0901580:intron | 45.0% | |
| GTTGAGGGTTAAAACCTTGG+AGG | - | chr6_1:98314406-98314425 | Msa0901580:intron | 45.0% | |
| AACCTTGGAGGATCAGTTGA+AGG | - | chr6_1:98314418-98314437 | Msa0901580:intron | 45.0% | |
| TTCCTTCAACTGATCCTCCA+AGG | + | chr6_1:98314423-98314442 | None:intergenic | 45.0% | |
| CAACTCCTTAAAGACAGCGA+AGG | - | chr6_1:98314448-98314467 | Msa0901580:intron | 45.0% | |
| CTCATCCTTCGCTGTCTTTA+AGG | + | chr6_1:98314456-98314475 | None:intergenic | 45.0% | |
| GTTATTAAGCTCCACGCACT+TGG | + | chr6_1:98314516-98314535 | None:intergenic | 45.0% | |
| !! | CAATTACGGTGCCATAAAGG+GGG | - | chr6_1:98314535-98314554 | Msa0901580:intron | 45.0% |
| GGCTGGGAATATGGAAAAAG+GGG | - | chr6_1:98314627-98314646 | Msa0901580:intron | 45.0% | |
| TGGGAATATGGAAAAAGGGG+AGG | - | chr6_1:98314630-98314649 | Msa0901580:intron | 45.0% | |
| ! | TGCTTTTGTAATGGCCGTGT+TGG | - | chr6_1:98314750-98314769 | Msa0901580:intron | 45.0% |
| ! | TAATGGCCGTGTTGGTGTAA+AGG | - | chr6_1:98314758-98314777 | Msa0901580:intron | 45.0% |
| CTGACACCTTTACACCAACA+CGG | + | chr6_1:98314767-98314786 | None:intergenic | 45.0% | |
| ACATGGGTGCTTTCTTCGTA+AGG | - | chr6_1:98314929-98314948 | Msa0901580:intron | 45.0% | |
| AGGCCACCTTCTTTCAAGAA+GGG | - | chr6_1:98314995-98315014 | Msa0901580:intron | 45.0% | |
| CTTCCCTTCTTGAAAGAAGG+TGG | + | chr6_1:98315001-98315020 | None:intergenic | 45.0% | |
| CACCTTCTTTCAAGAAGGGA+AGG | - | chr6_1:98314999-98315018 | Msa0901580:intron | 45.0% | |
| AGCCTTCCCTTCTTGAAAGA+AGG | + | chr6_1:98315004-98315023 | None:intergenic | 45.0% | |
| ! | CTGGTTGTTTCCCTTCAAAG+GGG | - | chr6_1:98315090-98315109 | Msa0901580:intron | 45.0% |
| ! | TGGTTGTTTCCCTTCAAAGG+GGG | - | chr6_1:98315091-98315110 | Msa0901580:intron | 45.0% |
| AGTAAGACTCCCCCTTTGAA+GGG | + | chr6_1:98315103-98315122 | None:intergenic | 45.0% | |
| ! | GGCACACATTACCGTTCTTT+TGG | - | chr6_1:98315663-98315682 | Msa0901580:intron | 45.0% |
| TTCTTGAGGCCCATCACTTT+GGG | + | chr6_1:98315719-98315738 | None:intergenic | 45.0% | |
| TTTCTTGAGGCCCATCACTT+TGG | + | chr6_1:98315720-98315739 | None:intergenic | 45.0% | |
| ! | AACCGAGCCTCTAGTTTCAT+TGG | - | chr6_1:98315998-98316017 | Msa0901580:intron | 45.0% |
| ! | ACCGAGCCTCTAGTTTCATT+GGG | - | chr6_1:98315999-98316018 | Msa0901580:intron | 45.0% |
| TCCCAATGAAACTAGAGGCT+CGG | + | chr6_1:98316003-98316022 | None:intergenic | 45.0% | |
| ! | AGCCTCTAGTTTCATTGGGA+CGG | - | chr6_1:98316003-98316022 | Msa0901580:intron | 45.0% |
| AAATGTGCCCTAACAGCACA+AGG | - | chr6_1:98316150-98316169 | Msa0901580:intron | 45.0% | |
| GTCGTCGATCCAAGAATTTC+AGG | - | chr6_1:98316275-98316294 | Msa0901580:intron | 45.0% | |
| CTTGAACCTTTGCCATGAGT+TGG | - | chr6_1:98317907-98317926 | Msa0901580:intron | 45.0% | |
| ATTTAGTCAAGATCCGCCAC+TGG | - | chr6_1:98318029-98318048 | Msa0901580:intron | 45.0% | |
| ! | CTCAAATCTGAAACCAGTGG+CGG | + | chr6_1:98318045-98318064 | None:intergenic | 45.0% |
| ! | CAGATTTGAGGTTGAGGTTG+AGG | - | chr6_1:98318055-98318074 | Msa0901580:intron | 45.0% |
| GCACGAACATGACAAAAGAG+TGG | + | chr6_1:98318352-98318371 | None:intergenic | 45.0% | |
| GTCATGTTCGTGCTACCAAA+TGG | - | chr6_1:98318359-98318378 | Msa0901580:intron | 45.0% | |
| GATAGACCGAAGAAAGCAGA+AGG | - | chr6_1:98318565-98318584 | Msa0901580:intron | 45.0% | |
| ! | CATTGTGTGGTTAGTCCTAG+GGG | + | chr6_1:98319828-98319847 | None:intergenic | 45.0% |
| TCACACGGTCAAGACATCAT+TGG | - | chr6_1:98321152-98321171 | Msa0901580:intron | 45.0% | |
| TGTACAGCCTTCCTTTCCTT+TGG | + | chr6_1:98321477-98321496 | None:intergenic | 45.0% | |
| !! | CCGAATTTTCTGGTAGGTTG+TGG | + | chr6_1:98321511-98321530 | None:intergenic | 45.0% |
| !! | CTGTGTTGACTAGCAGTTTG+GGG | - | chr6_1:98321558-98321577 | Msa0901580:intron | 45.0% |
| ! | GAAACAATGACCGTCCCTTT+TGG | + | chr6_1:98321730-98321749 | None:intergenic | 45.0% |
| !! | AAAAAAATTAAAAATCTATA+TGG | + | chr6_1:98319384-98319403 | None:intergenic | 5.0% |
| !! | AAATATTATTTAATAAGAAA+TGG | - | chr6_1:98319733-98319752 | Msa0901580:CDS | 5.0% |
| ! | AGTGTGGGAGTGTATGAGCT+TGG | - | chr6_1:98312240-98312259 | Msa0901580:intron | 50.0% |
| !! | GGAGTGTATGAGCTTGGTGT+AGG | - | chr6_1:98312246-98312265 | Msa0901580:intron | 50.0% |
| TGGCAGAGATGGAGGTCATT+TGG | - | chr6_1:98312383-98312402 | Msa0901580:CDS | 50.0% | |
| GGCAGAGATGGAGGTCATTT+GGG | - | chr6_1:98312384-98312403 | Msa0901580:CDS | 50.0% | |
| GTTGAACAGATGGAGACCGA+TGG | - | chr6_1:98312833-98312852 | Msa0901580:intron | 50.0% | |
| AATTGTTGTCGGTACGTCGG+AGG | - | chr6_1:98313169-98313188 | Msa0901580:intron | 50.0% | |
| ! | TGATGTTGGTAAGTCGGAGG+TGG | - | chr6_1:98313289-98313308 | Msa0901580:intron | 50.0% |
| TGGTAAGTCGGAGGTGGTAT+TGG | - | chr6_1:98313295-98313314 | Msa0901580:intron | 50.0% | |
| ! | GGAGGTGGTATTGGAAGTTG+AGG | - | chr6_1:98313304-98313323 | Msa0901580:intron | 50.0% |
| TGGTATGTCAGTGGTGGCTT+TGG | - | chr6_1:98313412-98313431 | Msa0901580:intron | 50.0% | |
| !! | AGTGGTGGCTTTGGAAGTTG+AGG | - | chr6_1:98313421-98313440 | Msa0901580:intron | 50.0% |
| ! | TGGTACGTCAGAGGTGGTTT+TGG | - | chr6_1:98313533-98313552 | Msa0901580:intron | 50.0% |
| ATTTGTCGTCTGCGAGCTGA+TGG | + | chr6_1:98313572-98313591 | None:intergenic | 50.0% | |
| TGGTACGTCAGAGGTGACTT+TGG | - | chr6_1:98313650-98313669 | Msa0901580:intron | 50.0% | |
| GGTTGACAATCAGCTCACTG+AGG | - | chr6_1:98313797-98313816 | Msa0901580:intron | 50.0% | |
| AGGGAAGAGTGATAAAGGCG+AGG | - | chr6_1:98313839-98313858 | Msa0901580:intron | 50.0% | |
| AGGCGAGGCAAACAAGAAGA+AGG | - | chr6_1:98313854-98313873 | Msa0901580:intron | 50.0% | |
| AGGGAAGAGTGATAAAGGCG+AGG | - | chr6_1:98313839-98313858 | Msa0901580:intron | 50.0% | |
| !! | GGTGTTGCTTGAAGTGATGG+AGG | - | chr6_1:98314322-98314341 | Msa0901580:intron | 50.0% |
| AGATGTTGAAGCCAAGTGCG+TGG | - | chr6_1:98314502-98314521 | Msa0901580:intron | 50.0% | |
| CTCAACAACCTCCCCCTTTA+TGG | + | chr6_1:98314549-98314568 | None:intergenic | 50.0% | |
| AAAGGGGGAGGTTGTTGAGA+AGG | - | chr6_1:98314550-98314569 | Msa0901580:intron | 50.0% | |
| AGTGCTTAGCGAGCCTCAAA+AGG | + | chr6_1:98314807-98314826 | None:intergenic | 50.0% | |
| ! | TTTGAGGCTCGCTAAGCACT+TGG | - | chr6_1:98314807-98314826 | Msa0901580:intron | 50.0% |
| TGGGTGCTTTCTTCGTAAGG+AGG | - | chr6_1:98314932-98314951 | Msa0901580:intron | 50.0% | |
| GAGGCCACCTTCTTTCAAGA+AGG | - | chr6_1:98314994-98315013 | Msa0901580:intron | 50.0% | |
| CAGTAAGACTCCCCCTTTGA+AGG | + | chr6_1:98315104-98315123 | None:intergenic | 50.0% | |
| CTTCAAAGGGGGAGTCTTAC+TGG | - | chr6_1:98315102-98315121 | Msa0901580:intron | 50.0% | |
| ! | TACTGGCTGCTTCCCTTCAA+AGG | - | chr6_1:98315119-98315138 | Msa0901580:intron | 50.0% |
| ACTGGCTGCTTCCCTTCAAA+GGG | - | chr6_1:98315120-98315139 | Msa0901580:intron | 50.0% | |
| CAGACAAGGGGGATCTTCTT+GGG | - | chr6_1:98317761-98317780 | Msa0901580:intron | 50.0% | |
| TTGGGAGCTCATGGTAGTCA+TGG | - | chr6_1:98317779-98317798 | Msa0901580:intron | 50.0% | |
| !! | CGCCACTGGTTTCAGATTTG+AGG | - | chr6_1:98318043-98318062 | Msa0901580:intron | 50.0% |
| TTTGACTGTTGGGACGGGTA+TGG | - | chr6_1:98318215-98318234 | Msa0901580:intron | 50.0% | |
| ! | GGTATGGAGTGCTTGACTGA+AGG | - | chr6_1:98318231-98318250 | Msa0901580:intron | 50.0% |
| CCTACCAGAAAATTCGGGTC+CGG | - | chr6_1:98321514-98321533 | Msa0901580:intron | 50.0% | |
| CTACCAGAAAATTCGGGTCC+GGG | - | chr6_1:98321515-98321534 | Msa0901580:intron | 50.0% | |
| ACTCCGAGTTCATAGACTCC+CGG | + | chr6_1:98321536-98321555 | None:intergenic | 50.0% | |
| CACAACTACTCGACACGAGT+CGG | + | chr6_1:98321606-98321625 | None:intergenic | 50.0% | |
| ! | TGTTTGCAAGGCATCTCCCT+TGG | + | chr6_1:98322250-98322269 | None:intergenic | 50.0% |
| GCTGCCATTGTCTGCTTCAT+CGG | + | chr6_1:98322481-98322500 | None:intergenic | 50.0% | |
| GAACTATCTTAGGACGCGAC+CGG | + | chr6_1:98322536-98322555 | None:intergenic | 50.0% | |
| CGCCGGTCGAAAAAAGAGTT+AGG | - | chr6_1:98322637-98322656 | Msa0901580:intron | 50.0% | |
| CACTACTACGCGATGAGGGT+CGG | + | chr6_1:98312316-98312335 | None:intergenic | 55.0% | |
| TGGTACGTTGGAGGTGGCTT+CGG | - | chr6_1:98313061-98313080 | Msa0901580:intron | 55.0% | |
| !! | GGAGGTGGCTTTGGAAGTTG+AGG | - | chr6_1:98313187-98313206 | Msa0901580:intron | 55.0% |
| !! | TGGTGTTGGTACGTCAGAGG+TGG | - | chr6_1:98313527-98313546 | Msa0901580:intron | 55.0% |
| TGATGTTGGTACGTCGGAGG+TGG | - | chr6_1:98313761-98313780 | Msa0901580:intron | 55.0% | |
| AGGCGAGGCGAACAAGAAGA+AGG | - | chr6_1:98314130-98314149 | Msa0901580:intron | 55.0% | |
| GAAGGTCGAGTGCGTTCTTG+AGG | - | chr6_1:98314148-98314167 | Msa0901580:intron | 55.0% | |
| TGCGTTCTTGAGGCTGAGAC+TGG | - | chr6_1:98314158-98314177 | Msa0901580:intron | 55.0% | |
| !! | TGATCGTGCTGGCTTCGTGA+AGG | - | chr6_1:98314205-98314224 | Msa0901580:intron | 55.0% |
| !! | TTACGGTGCCATAAAGGGGG+AGG | - | chr6_1:98314538-98314557 | Msa0901580:intron | 55.0% |
| GATTGTTCGGGATGAGGAGC+TGG | - | chr6_1:98314710-98314729 | Msa0901580:intron | 55.0% | |
| CTGGCTGCTTCCCTTCAAAG+GGG | - | chr6_1:98315121-98315140 | Msa0901580:intron | 55.0% | |
| TGCAAAGAGCTCAACCGAGC+TGG | - | chr6_1:98315689-98315708 | Msa0901580:intron | 55.0% | |
| GCAAAGAGCTCAACCGAGCT+GGG | - | chr6_1:98315690-98315709 | Msa0901580:intron | 55.0% | |
| TTGAGGCCCATCACTTTGGG+AGG | + | chr6_1:98315716-98315735 | None:intergenic | 55.0% | |
| GGCCGTCCCAATGAAACTAG+AGG | + | chr6_1:98316008-98316027 | None:intergenic | 55.0% | |
| GGCCCTGATGACTCACGTTA+AGG | - | chr6_1:98316024-98316043 | Msa0901580:intron | 55.0% | |
| GCTGCACCTAAAGCGTGTCA+AGG | + | chr6_1:98316344-98316363 | None:intergenic | 55.0% | |
| CCAAGAAGATCCCCCTTGTC+TGG | + | chr6_1:98317763-98317782 | None:intergenic | 55.0% | |
| CCAGACAAGGGGGATCTTCT+TGG | - | chr6_1:98317760-98317779 | Msa0901580:intron | 55.0% | |
| GGGATCTTCTTGGGAGCTCA+TGG | - | chr6_1:98317770-98317789 | Msa0901580:intron | 55.0% | |
| GTCATGGCTCCCCCCAAATT+TGG | - | chr6_1:98317795-98317814 | Msa0901580:intron | 55.0% | |
| GGTAGGTAGACACCACACGA+TGG | - | chr6_1:98318866-98318885 | Msa0901580:intron | 55.0% | |
| GTAGCTTTCGTGCCATCGTG+TGG | + | chr6_1:98318881-98318900 | None:intergenic | 55.0% | |
| !! | CCGGACCCGAATTTTCTGGT+AGG | + | chr6_1:98321517-98321536 | None:intergenic | 55.0% |
| ! | ACTCCCGGACCCGAATTTTC+TGG | + | chr6_1:98321521-98321540 | None:intergenic | 55.0% |
| GGTCCGGGAGTCTATGAACT+CGG | - | chr6_1:98321530-98321549 | Msa0901580:intron | 55.0% | |
| ! | TTGACTAGCAGTTTGGGGCG+CGG | - | chr6_1:98321563-98321582 | Msa0901580:intron | 55.0% |
| AACTACTCGACACGAGTCGG+TGG | + | chr6_1:98321603-98321622 | None:intergenic | 55.0% | |
| CGACTCGTGTCGAGTAGTTG+TGG | - | chr6_1:98321604-98321623 | Msa0901580:intron | 55.0% | |
| CGACCCTCATCGCGTAGTAG+TGG | - | chr6_1:98312314-98312333 | Msa0901580:intron | 60.0% | |
| GGAGGTGGCTTCGGAAGTTG+AGG | - | chr6_1:98313070-98313089 | Msa0901580:intron | 60.0% | |
| TGTTGTCGGTACGTCGGAGG+TGG | - | chr6_1:98313172-98313191 | Msa0901580:intron | 60.0% | |
| TGGTACGTCGGAGGTGGCTA+TGG | - | chr6_1:98313767-98313786 | Msa0901580:intron | 60.0% | |
| GGAGGTGGCTATGGAAGCTG+AGG | - | chr6_1:98313776-98313795 | Msa0901580:intron | 60.0% | |
| GGTTGACCATCAACTCGGCG+AGG | - | chr6_1:98314073-98314092 | Msa0901580:intron | 60.0% | |
| ! | CTGAGACTGGCTGCTCCTTG+TGG | - | chr6_1:98314171-98314190 | Msa0901580:intron | 60.0% |
| CTGGCTGCTCCTTGTGGAAC+AGG | - | chr6_1:98314177-98314196 | Msa0901580:intron | 60.0% | |
| ! | TCACTTTGGGAGGCCCAGCT+CGG | + | chr6_1:98315706-98315725 | None:intergenic | 60.0% |
| AGCTGGGCCTCCCAAAGTGA+TGG | - | chr6_1:98315706-98315725 | Msa0901580:intron | 60.0% | |
| GCTGGGCCTCCCAAAGTGAT+GGG | - | chr6_1:98315707-98315726 | Msa0901580:intron | 60.0% | |
| AATAACGGTCCACGGCGTCC+CGG | - | chr6_1:98322315-98322334 | Msa0901580:intron | 60.0% | |
| AGAATATCACCGGGACGCCG+TGG | + | chr6_1:98322327-98322346 | None:intergenic | 60.0% | |
| CGGTACGTCGGAGGTGGCTT+TGG | - | chr6_1:98313178-98313197 | Msa0901580:intron | 65.0% | |
| ! | GAGACGCCTCGCCGAGTTGA+TGG | + | chr6_1:98314082-98314101 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 98311401 | 98322734 | 98311401 | ID=Msa0901580;Name=Msa0901580 |
| chr6_1 | mRNA | 98311401 | 98322734 | 98311401 | ID=Msa0901580-mRNA-1;Parent=Msa0901580;Name=Msa0901580-mRNA-1;_AED=0.11;_eAED=0.13;_QI=0|0|0|0.87|0.71|0.75|8|0|959 |
| chr6_1 | exon | 98322709 | 98322734 | 98322709 | ID=Msa0901580-mRNA-1:exon:17327;Parent=Msa0901580-mRNA-1 |
| chr6_1 | exon | 98321653 | 98321920 | 98321653 | ID=Msa0901580-mRNA-1:exon:17326;Parent=Msa0901580-mRNA-1 |
| chr6_1 | exon | 98321212 | 98321293 | 98321212 | ID=Msa0901580-mRNA-1:exon:17325;Parent=Msa0901580-mRNA-1 |
| chr6_1 | exon | 98320722 | 98321048 | 98320722 | ID=Msa0901580-mRNA-1:exon:17324;Parent=Msa0901580-mRNA-1 |
| chr6_1 | exon | 98319484 | 98320669 | 98319484 | ID=Msa0901580-mRNA-1:exon:17323;Parent=Msa0901580-mRNA-1 |
| chr6_1 | exon | 98318950 | 98319088 | 98318950 | ID=Msa0901580-mRNA-1:exon:17322;Parent=Msa0901580-mRNA-1 |
| chr6_1 | exon | 98312339 | 98312695 | 98312339 | ID=Msa0901580-mRNA-1:exon:17321;Parent=Msa0901580-mRNA-1 |
| chr6_1 | exon | 98311401 | 98311895 | 98311401 | ID=Msa0901580-mRNA-1:exon:17320;Parent=Msa0901580-mRNA-1 |
| chr6_1 | CDS | 98322709 | 98322734 | 98322709 | ID=Msa0901580-mRNA-1:cds;Parent=Msa0901580-mRNA-1 |
| chr6_1 | CDS | 98321653 | 98321920 | 98321653 | ID=Msa0901580-mRNA-1:cds;Parent=Msa0901580-mRNA-1 |
| chr6_1 | CDS | 98321212 | 98321293 | 98321212 | ID=Msa0901580-mRNA-1:cds;Parent=Msa0901580-mRNA-1 |
| chr6_1 | CDS | 98320722 | 98321048 | 98320722 | ID=Msa0901580-mRNA-1:cds;Parent=Msa0901580-mRNA-1 |
| chr6_1 | CDS | 98319484 | 98320669 | 98319484 | ID=Msa0901580-mRNA-1:cds;Parent=Msa0901580-mRNA-1 |
| chr6_1 | CDS | 98318950 | 98319088 | 98318950 | ID=Msa0901580-mRNA-1:cds;Parent=Msa0901580-mRNA-1 |
| chr6_1 | CDS | 98312339 | 98312695 | 98312339 | ID=Msa0901580-mRNA-1:cds;Parent=Msa0901580-mRNA-1 |
| chr6_1 | CDS | 98311401 | 98311895 | 98311401 | ID=Msa0901580-mRNA-1:cds;Parent=Msa0901580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
