Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901600 | XP_003620925.1 | 58.861 | 158 | 14 | 1 | 1 | 107 | 211 | 368 | 1.08e-49 | 171 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901600 | sp|A2RQG7|ET_BRANA | 31.200 | 125 | 58 | 2 | 7 | 103 | 203 | 327 | 3.63e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901600 | G7KJT8 | 58.861 | 158 | 14 | 1 | 1 | 107 | 211 | 368 | 5.14e-50 | 171 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0901600 | TF | HRT |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901600 | MtrunA17_Chr6g0488451 | 58.861 | 158 | 14 | 1 | 1 | 107 | 211 | 368 | 9.91e-54 | 171 |
| Msa0901600 | MtrunA17_Chr7g0256351 | 63.333 | 90 | 32 | 1 | 2 | 90 | 216 | 305 | 3.22e-30 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 15 sgRNAs with CRISPR-Local
Find 629 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAATTTGTGGAGTGAATT+TGG | 0.231337 | 6_1:-98356649 | Msa0901600:CDS |
| ATCAATTATTTCTAATTAAT+AGG | 0.256718 | 6_1:+98351514 | None:intergenic |
| TGTAGAACACAACCAGTTAA+AGG | 0.297867 | 6_1:-98351586 | Msa0901600:intron |
| GTTGTATCTTGAACTATCTT+AGG | 0.334689 | 6_1:+98356696 | None:intergenic |
| TGAATTTGAACACGCGAGAT+AGG | 0.369579 | 6_1:+98356730 | None:intergenic |
| AAAAGATGTCATGATCATAA+AGG | 0.370970 | 6_1:-98351559 | Msa0901600:CDS |
| AAAGATGTCATGATCATAAA+GGG | 0.444185 | 6_1:-98351558 | Msa0901600:CDS |
| GAGAAGAGTGGTAAAATTTG+TGG | 0.450994 | 6_1:-98356660 | Msa0901600:CDS |
| GCTGCCATTGTCTGCTTCAT+CGG | 0.453379 | 6_1:+98356761 | None:intergenic |
| GTTAGGTGTCATGAACATAA+AGG | 0.469142 | 6_1:-98356585 | Msa0901600:CDS |
| TCGGATTTGTTATCTTTCAC+AGG | 0.485294 | 6_1:+98356780 | None:intergenic |
| CTCGCGTGTTCAAATTCAAC+CGG | 0.499323 | 6_1:-98356725 | Msa0901600:CDS |
| TTCTATTTGTACAAAGATGC+CGG | 0.503532 | 6_1:-98356619 | Msa0901600:CDS |
| GAACTATCTTAGGATGCGAC+CGG | 0.556126 | 6_1:+98356706 | None:intergenic |
| AAATCCGATGAAGCAGACAA+TGG | 0.675612 | 6_1:-98356765 | Msa0901600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTCTTTTACTATAAATAT+AGG | - | chr6_1:98352060-98352079 | Msa0901600:intron | 15.0% |
| !!! | GTTTCTTTTACTATAAATAT+AGG | - | chr6_1:98352060-98352079 | Msa0901600:intron | 15.0% |
| !!! | GTTTCTTTTACTATAAATAT+AGG | - | chr6_1:98352060-98352079 | Msa0901600:intron | 15.0% |
| !!! | TTTTTCAGAAACGTATTTTT+TGG | - | chr6_1:98352011-98352030 | Msa0901600:intron | 20.0% |
| !!! | TTTTCAGAAACGTATTTTTT+GGG | - | chr6_1:98352012-98352031 | Msa0901600:intron | 20.0% |
| !!! | TTTTTCAGAAACGTATTTTT+TGG | - | chr6_1:98352011-98352030 | Msa0901600:intron | 20.0% |
| !!! | TTTTCAGAAACGTATTTTTT+GGG | - | chr6_1:98352012-98352031 | Msa0901600:intron | 20.0% |
| !!! | TTTTTCAGAAACGTATTTTT+TGG | - | chr6_1:98352011-98352030 | Msa0901600:intron | 20.0% |
| !!! | TTTTCAGAAACGTATTTTTT+GGG | - | chr6_1:98352012-98352031 | Msa0901600:intron | 20.0% |
| ! | TAAAATTTGTGGAGTGAATT+TGG | - | chr6_1:98351662-98351681 | Msa0901600:intron | 25.0% |
| !!! | CAGATTTGGTACAATTTTAT+GGG | - | chr6_1:98352036-98352055 | Msa0901600:intron | 25.0% |
| ! | GTTCTATTCACTTTGATTAT+TGG | - | chr6_1:98352458-98352477 | Msa0901600:intron | 25.0% |
| ! | TTTGTATATGACAAAGTCTT+TGG | - | chr6_1:98352863-98352882 | Msa0901600:intron | 25.0% |
| !!! | ATAAGTAAAGTTGTTGCTTT+AGG | + | chr6_1:98352902-98352921 | None:intergenic | 25.0% |
| !!! | CAGATTTGGTACAATTTTAT+GGG | - | chr6_1:98352036-98352055 | Msa0901600:intron | 25.0% |
| ! | GTTCTATTCACTTTGATTAT+TGG | - | chr6_1:98352458-98352477 | Msa0901600:intron | 25.0% |
| ! | TTTGTATATGACAAAGTCTT+TGG | - | chr6_1:98352863-98352882 | Msa0901600:intron | 25.0% |
| !!! | ATAAGTAAAGTTGTTGCTTT+AGG | + | chr6_1:98352902-98352921 | None:intergenic | 25.0% |
| !!! | CAGATTTGGTACAATTTTAT+GGG | - | chr6_1:98352036-98352055 | Msa0901600:intron | 25.0% |
| ! | GTTCTATTCACTTTGATTAT+TGG | - | chr6_1:98352458-98352477 | Msa0901600:intron | 25.0% |
| !! | TAATTCCACATGTAATGTTT+TGG | + | chr6_1:98356685-98356704 | None:intergenic | 25.0% |
| !! | CATTACATGTGGAATTATTT+TGG | - | chr6_1:98356688-98356707 | Msa0901600:CDS | 25.0% |
| ! | AAAAGATGTCATGATCATAA+AGG | - | chr6_1:98356752-98356771 | Msa0901600:CDS | 25.0% |
| ! | AAAGATGTCATGATCATAAA+GGG | - | chr6_1:98356753-98356772 | Msa0901600:CDS | 25.0% |
| GTTGTATCTTGAACTATCTT+AGG | + | chr6_1:98351618-98351637 | None:intergenic | 30.0% | |
| ! | AATTTTACCACTCTTCTCAA+CGG | + | chr6_1:98351649-98351668 | None:intergenic | 30.0% |
| TTCTATTTGTACAAAGATGC+CGG | - | chr6_1:98351692-98351711 | Msa0901600:intron | 30.0% | |
| ! | CAACATCATGGTCAATATTT+TGG | + | chr6_1:98351806-98351825 | None:intergenic | 30.0% |
| TTGTGAAAGTGACTCAAAAT+TGG | - | chr6_1:98351833-98351852 | Msa0901600:intron | 30.0% | |
| ! | CTTTCAGCAAACATCAATTT+TGG | + | chr6_1:98351869-98351888 | None:intergenic | 30.0% |
| ! | TGTTTGCTGAAAGTACAAAT+CGG | - | chr6_1:98351876-98351895 | Msa0901600:intron | 30.0% |
| AAAATAACAGCACGCAAAAT+CGG | + | chr6_1:98351995-98352014 | None:intergenic | 30.0% | |
| CCATAAAATTGTACCAAATC+TGG | + | chr6_1:98352038-98352057 | None:intergenic | 30.0% | |
| !! | CCAGATTTGGTACAATTTTA+TGG | - | chr6_1:98352035-98352054 | Msa0901600:intron | 30.0% |
| TTTGTATAGAGTTTGTCTCT+TGG | - | chr6_1:98352156-98352175 | Msa0901600:intron | 30.0% | |
| TAACGTTACTCATCATATAG+TGG | - | chr6_1:98352310-98352329 | Msa0901600:intron | 30.0% | |
| ! | TTACTCATCATATAGTGGAA+CGG | - | chr6_1:98352315-98352334 | Msa0901600:intron | 30.0% |
| AAAGGATAATCTAGTACCAT+GGG | - | chr6_1:98352579-98352598 | Msa0901600:intron | 30.0% | |
| AGCAACAACTTTACTTATTC+AGG | - | chr6_1:98352904-98352923 | Msa0901600:intron | 30.0% | |
| ACAACTTTACTTATTCAGGA+TGG | - | chr6_1:98352908-98352927 | Msa0901600:intron | 30.0% | |
| ATGGAGTTCAACAAAATCAT+TGG | - | chr6_1:98352960-98352979 | Msa0901600:intron | 30.0% | |
| ! | CAACAAAATCATTGGTGATT+TGG | - | chr6_1:98352968-98352987 | Msa0901600:intron | 30.0% |
| ! | ATTACTCTAAAAAAAGGCCA+AGG | - | chr6_1:98353399-98353418 | Msa0901600:intron | 30.0% |
| ! | TTACTCTAAAAAAAGGCCAA+GGG | - | chr6_1:98353400-98353419 | Msa0901600:intron | 30.0% |
| TTGTGAAAGTGACTCAAAAT+TGG | - | chr6_1:98351833-98351852 | Msa0901600:intron | 30.0% | |
| ! | CTTTCAGCAAACATCAATTT+TGG | + | chr6_1:98351869-98351888 | None:intergenic | 30.0% |
| ! | TGTTTGCTGAAAGTACAAAT+CGG | - | chr6_1:98351876-98351895 | Msa0901600:intron | 30.0% |
| AAAATAACAGCACGCAAAAT+CGG | + | chr6_1:98351995-98352014 | None:intergenic | 30.0% | |
| CCATAAAATTGTACCAAATC+TGG | + | chr6_1:98352038-98352057 | None:intergenic | 30.0% | |
| !! | CCAGATTTGGTACAATTTTA+TGG | - | chr6_1:98352035-98352054 | Msa0901600:intron | 30.0% |
| TTTGTATAGAGTTTGTCTCT+TGG | - | chr6_1:98352156-98352175 | Msa0901600:intron | 30.0% | |
| TAACGTTACTCATCATATAG+TGG | - | chr6_1:98352310-98352329 | Msa0901600:intron | 30.0% | |
| ! | TTACTCATCATATAGTGGAA+CGG | - | chr6_1:98352315-98352334 | Msa0901600:intron | 30.0% |
| AAAGGATAATCTAGTACCAT+GGG | - | chr6_1:98352579-98352598 | Msa0901600:intron | 30.0% | |
| AGCAACAACTTTACTTATTC+AGG | - | chr6_1:98352904-98352923 | Msa0901600:intron | 30.0% | |
| ACAACTTTACTTATTCAGGA+TGG | - | chr6_1:98352908-98352927 | Msa0901600:intron | 30.0% | |
| ATGGAGTTCAACAAAATCAT+TGG | - | chr6_1:98352960-98352979 | Msa0901600:intron | 30.0% | |
| ! | ATTACTCTAAAAAAAGGCCA+AGG | - | chr6_1:98353399-98353418 | Msa0901600:intron | 30.0% |
| ! | TTACTCTAAAAAAAGGCCAA+GGG | - | chr6_1:98353400-98353419 | Msa0901600:intron | 30.0% |
| TTGTGAAAGTGACTCAAAAT+TGG | - | chr6_1:98351833-98351852 | Msa0901600:intron | 30.0% | |
| ! | CTTTCAGCAAACATCAATTT+TGG | + | chr6_1:98351869-98351888 | None:intergenic | 30.0% |
| ! | TGTTTGCTGAAAGTACAAAT+CGG | - | chr6_1:98351876-98351895 | Msa0901600:intron | 30.0% |
| AAAATAACAGCACGCAAAAT+CGG | + | chr6_1:98351995-98352014 | None:intergenic | 30.0% | |
| CCATAAAATTGTACCAAATC+TGG | + | chr6_1:98352038-98352057 | None:intergenic | 30.0% | |
| !! | CCAGATTTGGTACAATTTTA+TGG | - | chr6_1:98352035-98352054 | Msa0901600:intron | 30.0% |
| TTTGTATAGAGTTTGTCTCT+TGG | - | chr6_1:98352156-98352175 | Msa0901600:intron | 30.0% | |
| TAACGTTACTCATCATATAG+TGG | - | chr6_1:98352310-98352329 | Msa0901600:intron | 30.0% | |
| ! | TTACTCATCATATAGTGGAA+CGG | - | chr6_1:98352315-98352334 | Msa0901600:intron | 30.0% |
| TATCACCAAAACATTACATG+TGG | - | chr6_1:98356677-98356696 | Msa0901600:CDS | 30.0% | |
| !!! | TGTGGAATTATTTTGGAAGA+TGG | - | chr6_1:98356695-98356714 | Msa0901600:CDS | 30.0% |
| ! | CATCTTTTTCTTCCTTTAAC+TGG | + | chr6_1:98356740-98356759 | None:intergenic | 30.0% |
| !! | TCGGATTTGTTATCTTTCAC+AGG | + | chr6_1:98351534-98351553 | None:intergenic | 35.0% |
| GAGAAGAGTGGTAAAATTTG+TGG | - | chr6_1:98351651-98351670 | Msa0901600:intron | 35.0% | |
| ! | GTTAGGTGTCATGAACATAA+AGG | - | chr6_1:98351726-98351745 | Msa0901600:intron | 35.0% |
| TCCAAGTCAGAATCAAAAAG+AGG | - | chr6_1:98351765-98351784 | Msa0901600:intron | 35.0% | |
| !! | TCCTCTTTTTGATTCTGACT+TGG | + | chr6_1:98351769-98351788 | None:intergenic | 35.0% |
| CAAAAAGAGGAAATGCTTGT+AGG | - | chr6_1:98351778-98351797 | Msa0901600:intron | 35.0% | |
| CACAACAATCTTCAACATCA+TGG | + | chr6_1:98351818-98351837 | None:intergenic | 35.0% | |
| AGTGACTCAAAATTGGAGTT+TGG | - | chr6_1:98351840-98351859 | Msa0901600:intron | 35.0% | |
| ! | GTTTGCTGAAAGTACAAATC+GGG | - | chr6_1:98351877-98351896 | Msa0901600:intron | 35.0% |
| ! | TTTGCTGAAAGTACAAATCG+GGG | - | chr6_1:98351878-98351897 | Msa0901600:intron | 35.0% |
| ! | CAGTTTGGTACTGGAAAAAT+CGG | - | chr6_1:98351945-98351964 | Msa0901600:intron | 35.0% |
| AAATAACAGCACGCAAAATC+GGG | + | chr6_1:98351994-98352013 | None:intergenic | 35.0% | |
| AGAAAGGCAACAACAAAACT+AGG | - | chr6_1:98352132-98352151 | Msa0901600:intron | 35.0% | |
| GAAAGGCAACAACAAAACTA+GGG | - | chr6_1:98352133-98352152 | Msa0901600:intron | 35.0% | |
| AATCCTAATAGTGTTTCCCA+AGG | + | chr6_1:98352211-98352230 | None:intergenic | 35.0% | |
| ACTATTAGGATTGAGTCTCT+TGG | - | chr6_1:98352219-98352238 | Msa0901600:intron | 35.0% | |
| GAGTAACGTTACAAAAGAGA+TGG | + | chr6_1:98352301-98352320 | None:intergenic | 35.0% | |
| !! | AAAGATTTGTTGACCCAGTT+CGG | + | chr6_1:98352377-98352396 | None:intergenic | 35.0% |
| !!! | TCGCTGTTGTTTTCTACTTT+TGG | - | chr6_1:98352420-98352439 | Msa0901600:intron | 35.0% |
| ! | TCCACACATCAAGTTGTTAT+TGG | - | chr6_1:98352502-98352521 | Msa0901600:intron | 35.0% |
| ACCAATAACAACTTGATGTG+TGG | + | chr6_1:98352506-98352525 | None:intergenic | 35.0% | |
| CAAAGGATAATCTAGTACCA+TGG | - | chr6_1:98352578-98352597 | Msa0901600:intron | 35.0% | |
| TGGGATATTGAGAAGTTTAC+CGG | - | chr6_1:98352609-98352628 | Msa0901600:intron | 35.0% | |
| !!! | TAACGATTTTGGGTTATGGA+AGG | - | chr6_1:98352635-98352654 | Msa0901600:intron | 35.0% |
| ! | AAAGTGTGAGAAAGCTTTGA+AGG | - | chr6_1:98352686-98352705 | Msa0901600:intron | 35.0% |
| !! | AAGTGTGAGAAAGCTTTGAA+GGG | - | chr6_1:98352687-98352706 | Msa0901600:intron | 35.0% |
| !!! | AGTTTTGAGAGAAGCAACAA+AGG | - | chr6_1:98352803-98352822 | Msa0901600:intron | 35.0% |
| GGTAAAGTTAAAGATCGTCA+TGG | - | chr6_1:98352929-98352948 | Msa0901600:intron | 35.0% | |
| AAGAATACTCATGATCAGTC+TGG | - | chr6_1:98353150-98353169 | Msa0901600:intron | 35.0% | |
| ! | TGCGGGATTACTCTAAAAAA+AGG | - | chr6_1:98353393-98353412 | Msa0901600:intron | 35.0% |
| ! | CTAACTACGCTAGGTATTTT+AGG | + | chr6_1:98353505-98353524 | None:intergenic | 35.0% |
| ! | TGGATTACTCTAAAAGCCAA+GGG | - | chr6_1:98353591-98353610 | Msa0901600:intron | 35.0% |
| TGTTGAAGAGGTTATGGTAA+AGG | - | chr6_1:98353658-98353677 | Msa0901600:intron | 35.0% | |
| !! | AGCAAGGTGTTGATGTTAAA+TGG | - | chr6_1:98353818-98353837 | Msa0901600:intron | 35.0% |
| !! | GCAAGGTGTTGATGTTAAAT+GGG | - | chr6_1:98353819-98353838 | Msa0901600:intron | 35.0% |
| AATGGGCATCATCACTAATT+TGG | - | chr6_1:98353836-98353855 | Msa0901600:intron | 35.0% | |
| ! | TCATCACTAATTTGGAGTCA+AGG | - | chr6_1:98353844-98353863 | Msa0901600:intron | 35.0% |
| AGTGACTCAAAATTGGAGTT+TGG | - | chr6_1:98351840-98351859 | Msa0901600:intron | 35.0% | |
| ! | GTTTGCTGAAAGTACAAATC+GGG | - | chr6_1:98351877-98351896 | Msa0901600:intron | 35.0% |
| ! | TTTGCTGAAAGTACAAATCG+GGG | - | chr6_1:98351878-98351897 | Msa0901600:intron | 35.0% |
| ! | CAGTTTGGTACTGGAAAAAT+CGG | - | chr6_1:98351945-98351964 | Msa0901600:intron | 35.0% |
| AAATAACAGCACGCAAAATC+GGG | + | chr6_1:98351994-98352013 | None:intergenic | 35.0% | |
| AGAAAGGCAACAACAAAACT+AGG | - | chr6_1:98352132-98352151 | Msa0901600:intron | 35.0% | |
| GAAAGGCAACAACAAAACTA+GGG | - | chr6_1:98352133-98352152 | Msa0901600:intron | 35.0% | |
| AATCCTAATAGTGTTTCCCA+AGG | + | chr6_1:98352211-98352230 | None:intergenic | 35.0% | |
| ACTATTAGGATTGAGTCTCT+TGG | - | chr6_1:98352219-98352238 | Msa0901600:intron | 35.0% | |
| GAGTAACGTTACAAAAGAGA+TGG | + | chr6_1:98352301-98352320 | None:intergenic | 35.0% | |
| !! | AAAGATTTGTTGACCCAGTT+CGG | + | chr6_1:98352377-98352396 | None:intergenic | 35.0% |
| !!! | TCGCTGTTGTTTTCTACTTT+TGG | - | chr6_1:98352420-98352439 | Msa0901600:intron | 35.0% |
| ! | TCCACACATCAAGTTGTTAT+TGG | - | chr6_1:98352502-98352521 | Msa0901600:intron | 35.0% |
| ACCAATAACAACTTGATGTG+TGG | + | chr6_1:98352506-98352525 | None:intergenic | 35.0% | |
| CAAAGGATAATCTAGTACCA+TGG | - | chr6_1:98352578-98352597 | Msa0901600:intron | 35.0% | |
| TGGGATATTGAGAAGTTTAC+CGG | - | chr6_1:98352609-98352628 | Msa0901600:intron | 35.0% | |
| !!! | TAACGATTTTGGGTTATGGA+AGG | - | chr6_1:98352635-98352654 | Msa0901600:intron | 35.0% |
| ! | AAAGTGTGAGAAAGCTTTGA+AGG | - | chr6_1:98352686-98352705 | Msa0901600:intron | 35.0% |
| !! | AAGTGTGAGAAAGCTTTGAA+GGG | - | chr6_1:98352687-98352706 | Msa0901600:intron | 35.0% |
| !!! | AGTTTTGAGAGAAGCAACAA+AGG | - | chr6_1:98352803-98352822 | Msa0901600:intron | 35.0% |
| GGTAAAGTTAAAGATCGTCA+TGG | - | chr6_1:98352929-98352948 | Msa0901600:intron | 35.0% | |
| AAGAATACTCATGATCAGTC+TGG | - | chr6_1:98353150-98353169 | Msa0901600:intron | 35.0% | |
| ! | TGCGGGATTACTCTAAAAAA+AGG | - | chr6_1:98353393-98353412 | Msa0901600:intron | 35.0% |
| ! | CTAACTACGCTAGGTATTTT+AGG | + | chr6_1:98353505-98353524 | None:intergenic | 35.0% |
| ! | TGGATTACTCTAAAAGCCAA+GGG | - | chr6_1:98353591-98353610 | Msa0901600:intron | 35.0% |
| TGTTGAAGAGGTTATGGTAA+AGG | - | chr6_1:98353658-98353677 | Msa0901600:intron | 35.0% | |
| !! | AGCAAGGTGTTGATGTTAAA+TGG | - | chr6_1:98353818-98353837 | Msa0901600:intron | 35.0% |
| !! | GCAAGGTGTTGATGTTAAAT+GGG | - | chr6_1:98353819-98353838 | Msa0901600:intron | 35.0% |
| AATGGGCATCATCACTAATT+TGG | - | chr6_1:98353836-98353855 | Msa0901600:intron | 35.0% | |
| ! | TCATCACTAATTTGGAGTCA+AGG | - | chr6_1:98353844-98353863 | Msa0901600:intron | 35.0% |
| AGTGACTCAAAATTGGAGTT+TGG | - | chr6_1:98351840-98351859 | Msa0901600:intron | 35.0% | |
| ! | GTTTGCTGAAAGTACAAATC+GGG | - | chr6_1:98351877-98351896 | Msa0901600:intron | 35.0% |
| ! | TTTGCTGAAAGTACAAATCG+GGG | - | chr6_1:98351878-98351897 | Msa0901600:intron | 35.0% |
| ! | CAGTTTGGTACTGGAAAAAT+CGG | - | chr6_1:98351945-98351964 | Msa0901600:intron | 35.0% |
| AAATAACAGCACGCAAAATC+GGG | + | chr6_1:98351994-98352013 | None:intergenic | 35.0% | |
| AGAAAGGCAACAACAAAACT+AGG | - | chr6_1:98352132-98352151 | Msa0901600:intron | 35.0% | |
| GAAAGGCAACAACAAAACTA+GGG | - | chr6_1:98352133-98352152 | Msa0901600:intron | 35.0% | |
| AATCCTAATAGTGTTTCCCA+AGG | + | chr6_1:98352211-98352230 | None:intergenic | 35.0% | |
| ACTATTAGGATTGAGTCTCT+TGG | - | chr6_1:98352219-98352238 | Msa0901600:intron | 35.0% | |
| GAGTAACGTTACAAAAGAGA+TGG | + | chr6_1:98352301-98352320 | None:intergenic | 35.0% | |
| !! | AAAGATTTGTTGACCCAGTT+CGG | + | chr6_1:98352377-98352396 | None:intergenic | 35.0% |
| !!! | TCGCTGTTGTTTTCTACTTT+TGG | - | chr6_1:98352420-98352439 | Msa0901600:intron | 35.0% |
| ! | TCCACACATCAAGTTGTTAT+TGG | - | chr6_1:98352502-98352521 | Msa0901600:intron | 35.0% |
| ACCAATAACAACTTGATGTG+TGG | + | chr6_1:98352506-98352525 | None:intergenic | 35.0% | |
| TTTGTGGAAGATCTTTGTTG+CGG | + | chr6_1:98356629-98356648 | None:intergenic | 35.0% | |
| CAAAGATCTTCCACAAACAA+TGG | - | chr6_1:98356632-98356651 | Msa0901600:CDS | 35.0% | |
| TGTAGAACACAACCAGTTAA+AGG | - | chr6_1:98356725-98356744 | Msa0901600:CDS | 35.0% | |
| AAATCCGATGAAGCAGACAA+TGG | - | chr6_1:98351546-98351565 | Msa0901600:CDS | 40.0% | |
| TGAATTTGAACACGCGAGAT+AGG | + | chr6_1:98351584-98351603 | None:intergenic | 40.0% | |
| ! | GATTTTTCCGTTGAGAAGAG+TGG | - | chr6_1:98351639-98351658 | Msa0901600:intron | 40.0% |
| !!! | CACCTAACTCTTTTTTCGAC+CGG | + | chr6_1:98351714-98351733 | None:intergenic | 40.0% |
| GACTCAAAATTGGAGTTTGG+AGG | - | chr6_1:98351843-98351862 | Msa0901600:intron | 40.0% | |
| !!! | CGTATTTTTTGGGCCAGATT+TGG | - | chr6_1:98352022-98352041 | Msa0901600:intron | 40.0% |
| GCATTGTATCAGTGTAAACC+TGG | - | chr6_1:98352082-98352101 | Msa0901600:intron | 40.0% | |
| AGTGTAAACCTGGAGATAGA+GGG | - | chr6_1:98352092-98352111 | Msa0901600:intron | 40.0% | |
| GCTGAAACAAGGGTTTAGAA+AGG | - | chr6_1:98352116-98352135 | Msa0901600:intron | 40.0% | |
| TTGTCTCTTGGCAACAAACT+AGG | - | chr6_1:98352168-98352187 | Msa0901600:intron | 40.0% | |
| ! | TGGCAACAAACTAGGTTTTG+AGG | - | chr6_1:98352176-98352195 | Msa0901600:intron | 40.0% |
| !! | GGCAACAAACTAGGTTTTGA+GGG | - | chr6_1:98352177-98352196 | Msa0901600:intron | 40.0% |
| !! | TTTTGAGGGTTGATTCACCT+TGG | - | chr6_1:98352191-98352210 | Msa0901600:intron | 40.0% |
| ! | TTTGAGGGTTGATTCACCTT+GGG | - | chr6_1:98352192-98352211 | Msa0901600:intron | 40.0% |
| TCACCTTGGGAAACACTATT+AGG | - | chr6_1:98352205-98352224 | Msa0901600:intron | 40.0% | |
| AGGATTGAGTCTCTTGGTTA+CGG | - | chr6_1:98352225-98352244 | Msa0901600:intron | 40.0% | |
| ! | TCATCATATAGTGGAACGGA+GGG | - | chr6_1:98352319-98352338 | Msa0901600:intron | 40.0% |
| GAAAACAACAGCGAGAGAAA+AGG | + | chr6_1:98352414-98352433 | None:intergenic | 40.0% | |
| TTCATCGAATCCGCAACAAT+TGG | - | chr6_1:98352534-98352553 | Msa0901600:intron | 40.0% | |
| ! | TTTACCGGCGATAACGATTT+TGG | - | chr6_1:98352624-98352643 | Msa0901600:intron | 40.0% |
| ! | TTACCGGCGATAACGATTTT+GGG | - | chr6_1:98352625-98352644 | Msa0901600:intron | 40.0% |
| TAACCCAAAATCGTTATCGC+CGG | + | chr6_1:98352631-98352650 | None:intergenic | 40.0% | |
| !!! | GCGATAACGATTTTGGGTTA+TGG | - | chr6_1:98352631-98352650 | Msa0901600:intron | 40.0% |
| TGGGTTATGGAAGGTAAAGA+TGG | - | chr6_1:98352644-98352663 | Msa0901600:intron | 40.0% | |
| ATGGAAGGTAAAGATGGAAG+CGG | - | chr6_1:98352650-98352669 | Msa0901600:intron | 40.0% | |
| CTCTCAAAACTTTATCTCCG+AGG | + | chr6_1:98352794-98352813 | None:intergenic | 40.0% | |
| ! | TGGTGATTTGGAGAACATTG+AGG | - | chr6_1:98352980-98352999 | Msa0901600:intron | 40.0% |
| TTAAACACTCAACATCAGCC+TGG | - | chr6_1:98353115-98353134 | Msa0901600:intron | 40.0% | |
| TACTCATGATCTACCTGTTG+AGG | - | chr6_1:98353190-98353209 | Msa0901600:intron | 40.0% | |
| ! | AGATGTACGCATTTGCTAGT+TGG | - | chr6_1:98353240-98353259 | Msa0901600:intron | 40.0% |
| ! | GATGTACGCATTTGCTAGTT+GGG | - | chr6_1:98353241-98353260 | Msa0901600:intron | 40.0% |
| ! | ATGTACGCATTTGCTAGTTG+GGG | - | chr6_1:98353242-98353261 | Msa0901600:intron | 40.0% |
| GAGCAAGGGATTTCTTCATA+AGG | - | chr6_1:98353348-98353367 | Msa0901600:intron | 40.0% | |
| AGAATGTATAGCACGACTTG+CGG | - | chr6_1:98353375-98353394 | Msa0901600:intron | 40.0% | |
| AAAAAAAGGCCAAGGGTGAT+TGG | - | chr6_1:98353407-98353426 | Msa0901600:intron | 40.0% | |
| ATGTCATGGTGAATGCTTGT+GGG | - | chr6_1:98353475-98353494 | Msa0901600:intron | 40.0% | |
| ! | GTGGATTACTCTAAAAGCCA+AGG | - | chr6_1:98353590-98353609 | Msa0901600:intron | 40.0% |
| TCTAAAAGCCAAGGGTGATT+GGG | - | chr6_1:98353599-98353618 | Msa0901600:intron | 40.0% | |
| GTGGAACTACCTAAAATTCC+TGG | - | chr6_1:98353684-98353703 | Msa0901600:intron | 40.0% | |
| ! | TCACTAATTTGGAGTCAAGG+TGG | - | chr6_1:98353847-98353866 | Msa0901600:intron | 40.0% |
| GACTCAAAATTGGAGTTTGG+AGG | - | chr6_1:98351843-98351862 | Msa0901600:intron | 40.0% | |
| !!! | CGTATTTTTTGGGCCAGATT+TGG | - | chr6_1:98352022-98352041 | Msa0901600:intron | 40.0% |
| GCATTGTATCAGTGTAAACC+TGG | - | chr6_1:98352082-98352101 | Msa0901600:intron | 40.0% | |
| AGTGTAAACCTGGAGATAGA+GGG | - | chr6_1:98352092-98352111 | Msa0901600:intron | 40.0% | |
| GCTGAAACAAGGGTTTAGAA+AGG | - | chr6_1:98352116-98352135 | Msa0901600:intron | 40.0% | |
| TTGTCTCTTGGCAACAAACT+AGG | - | chr6_1:98352168-98352187 | Msa0901600:intron | 40.0% | |
| ! | TGGCAACAAACTAGGTTTTG+AGG | - | chr6_1:98352176-98352195 | Msa0901600:intron | 40.0% |
| !! | GGCAACAAACTAGGTTTTGA+GGG | - | chr6_1:98352177-98352196 | Msa0901600:intron | 40.0% |
| !! | TTTTGAGGGTTGATTCACCT+TGG | - | chr6_1:98352191-98352210 | Msa0901600:intron | 40.0% |
| ! | TTTGAGGGTTGATTCACCTT+GGG | - | chr6_1:98352192-98352211 | Msa0901600:intron | 40.0% |
| TCACCTTGGGAAACACTATT+AGG | - | chr6_1:98352205-98352224 | Msa0901600:intron | 40.0% | |
| AGGATTGAGTCTCTTGGTTA+CGG | - | chr6_1:98352225-98352244 | Msa0901600:intron | 40.0% | |
| ! | TCATCATATAGTGGAACGGA+GGG | - | chr6_1:98352319-98352338 | Msa0901600:intron | 40.0% |
| GAAAACAACAGCGAGAGAAA+AGG | + | chr6_1:98352414-98352433 | None:intergenic | 40.0% | |
| TTCATCGAATCCGCAACAAT+TGG | - | chr6_1:98352534-98352553 | Msa0901600:intron | 40.0% | |
| ! | TTTACCGGCGATAACGATTT+TGG | - | chr6_1:98352624-98352643 | Msa0901600:intron | 40.0% |
| ! | TTACCGGCGATAACGATTTT+GGG | - | chr6_1:98352625-98352644 | Msa0901600:intron | 40.0% |
| TAACCCAAAATCGTTATCGC+CGG | + | chr6_1:98352631-98352650 | None:intergenic | 40.0% | |
| !!! | GCGATAACGATTTTGGGTTA+TGG | - | chr6_1:98352631-98352650 | Msa0901600:intron | 40.0% |
| TGGGTTATGGAAGGTAAAGA+TGG | - | chr6_1:98352644-98352663 | Msa0901600:intron | 40.0% | |
| ATGGAAGGTAAAGATGGAAG+CGG | - | chr6_1:98352650-98352669 | Msa0901600:intron | 40.0% | |
| CTCTCAAAACTTTATCTCCG+AGG | + | chr6_1:98352794-98352813 | None:intergenic | 40.0% | |
| TTAAACACTCAACATCAGCC+TGG | - | chr6_1:98353115-98353134 | Msa0901600:intron | 40.0% | |
| TACTCATGATCTACCTGTTG+AGG | - | chr6_1:98353190-98353209 | Msa0901600:intron | 40.0% | |
| ! | AGATGTACGCATTTGCTAGT+TGG | - | chr6_1:98353240-98353259 | Msa0901600:intron | 40.0% |
| ! | GATGTACGCATTTGCTAGTT+GGG | - | chr6_1:98353241-98353260 | Msa0901600:intron | 40.0% |
| ! | ATGTACGCATTTGCTAGTTG+GGG | - | chr6_1:98353242-98353261 | Msa0901600:intron | 40.0% |
| GAGCAAGGGATTTCTTCATA+AGG | - | chr6_1:98353348-98353367 | Msa0901600:intron | 40.0% | |
| AGAATGTATAGCACGACTTG+CGG | - | chr6_1:98353375-98353394 | Msa0901600:intron | 40.0% | |
| AAAAAAAGGCCAAGGGTGAT+TGG | - | chr6_1:98353407-98353426 | Msa0901600:intron | 40.0% | |
| ATGTCATGGTGAATGCTTGT+GGG | - | chr6_1:98353475-98353494 | Msa0901600:intron | 40.0% | |
| ! | GTGGATTACTCTAAAAGCCA+AGG | - | chr6_1:98353590-98353609 | Msa0901600:intron | 40.0% |
| TCTAAAAGCCAAGGGTGATT+GGG | - | chr6_1:98353599-98353618 | Msa0901600:intron | 40.0% | |
| GTGGAACTACCTAAAATTCC+TGG | - | chr6_1:98353684-98353703 | Msa0901600:intron | 40.0% | |
| ! | TCACTAATTTGGAGTCAAGG+TGG | - | chr6_1:98353847-98353866 | Msa0901600:intron | 40.0% |
| GACTCAAAATTGGAGTTTGG+AGG | - | chr6_1:98351843-98351862 | Msa0901600:intron | 40.0% | |
| !!! | CGTATTTTTTGGGCCAGATT+TGG | - | chr6_1:98352022-98352041 | Msa0901600:intron | 40.0% |
| GCATTGTATCAGTGTAAACC+TGG | - | chr6_1:98352082-98352101 | Msa0901600:intron | 40.0% | |
| AGTGTAAACCTGGAGATAGA+GGG | - | chr6_1:98352092-98352111 | Msa0901600:intron | 40.0% | |
| GCTGAAACAAGGGTTTAGAA+AGG | - | chr6_1:98352116-98352135 | Msa0901600:intron | 40.0% | |
| TTGTCTCTTGGCAACAAACT+AGG | - | chr6_1:98352168-98352187 | Msa0901600:intron | 40.0% | |
| ! | TGGCAACAAACTAGGTTTTG+AGG | - | chr6_1:98352176-98352195 | Msa0901600:intron | 40.0% |
| !! | GGCAACAAACTAGGTTTTGA+GGG | - | chr6_1:98352177-98352196 | Msa0901600:intron | 40.0% |
| !! | TTTTGAGGGTTGATTCACCT+TGG | - | chr6_1:98352191-98352210 | Msa0901600:intron | 40.0% |
| ! | TTTGAGGGTTGATTCACCTT+GGG | - | chr6_1:98352192-98352211 | Msa0901600:intron | 40.0% |
| TCACCTTGGGAAACACTATT+AGG | - | chr6_1:98352205-98352224 | Msa0901600:intron | 40.0% | |
| AGGATTGAGTCTCTTGGTTA+CGG | - | chr6_1:98352225-98352244 | Msa0901600:intron | 40.0% | |
| ! | TCATCATATAGTGGAACGGA+GGG | - | chr6_1:98352319-98352338 | Msa0901600:intron | 40.0% |
| GAAAACAACAGCGAGAGAAA+AGG | + | chr6_1:98352414-98352433 | None:intergenic | 40.0% | |
| AACTGGTTGTGTTCTACAAG+TGG | + | chr6_1:98356723-98356742 | None:intergenic | 40.0% | |
| CTCGCGTGTTCAAATTCAAC+CGG | - | chr6_1:98351586-98351605 | Msa0901600:intron | 45.0% | |
| GAACTATCTTAGGATGCGAC+CGG | + | chr6_1:98351608-98351627 | None:intergenic | 45.0% | |
| TGCCGGTCGAAAAAAGAGTT+AGG | - | chr6_1:98351709-98351728 | Msa0901600:intron | 45.0% | |
| TCCCAAAGACAGCCAAAATC+GGG | + | chr6_1:98351924-98351943 | None:intergenic | 45.0% | |
| CTCCCAAAGACAGCCAAAAT+CGG | + | chr6_1:98351925-98351944 | None:intergenic | 45.0% | |
| CAGTGTAAACCTGGAGATAG+AGG | - | chr6_1:98352091-98352110 | Msa0901600:intron | 45.0% | |
| GTGTAAACCTGGAGATAGAG+GGG | - | chr6_1:98352093-98352112 | Msa0901600:intron | 45.0% | |
| TGTAAACCTGGAGATAGAGG+GGG | - | chr6_1:98352094-98352113 | Msa0901600:intron | 45.0% | |
| GGATTGAGTCTCTTGGTTAC+GGG | - | chr6_1:98352226-98352245 | Msa0901600:intron | 45.0% | |
| GCTGGGATTTGGGTAGAATT+AGG | - | chr6_1:98352254-98352273 | Msa0901600:intron | 45.0% | |
| GGGATTTGGGTAGAATTAGG+CGG | - | chr6_1:98352257-98352276 | Msa0901600:intron | 45.0% | |
| GGATTTGGGTAGAATTAGGC+GGG | - | chr6_1:98352258-98352277 | Msa0901600:intron | 45.0% | |
| ! | CTCATCATATAGTGGAACGG+AGG | - | chr6_1:98352318-98352337 | Msa0901600:intron | 45.0% |
| TCCAAATTGACCTAGTCTGG+GGG | + | chr6_1:98352354-98352373 | None:intergenic | 45.0% | |
| GTCCAAATTGACCTAGTCTG+GGG | + | chr6_1:98352355-98352374 | None:intergenic | 45.0% | |
| GGTCCAAATTGACCTAGTCT+GGG | + | chr6_1:98352356-98352375 | None:intergenic | 45.0% | |
| TAGGTCAATTTGGACCGAAC+TGG | - | chr6_1:98352360-98352379 | Msa0901600:intron | 45.0% | |
| AGGTCAATTTGGACCGAACT+GGG | - | chr6_1:98352361-98352380 | Msa0901600:intron | 45.0% | |
| CAACTTGATGTGTGGAGCAA+GGG | + | chr6_1:98352498-98352517 | None:intergenic | 45.0% | |
| ACAACTTGATGTGTGGAGCA+AGG | + | chr6_1:98352499-98352518 | None:intergenic | 45.0% | |
| TAGTACCATGGGTTCGAAGT+GGG | - | chr6_1:98352590-98352609 | Msa0901600:intron | 45.0% | |
| AATATCCCACTTCGAACCCA+TGG | + | chr6_1:98352598-98352617 | None:intergenic | 45.0% | |
| !! | GAGAAAGCTTTGAAGGGTGA+AGG | - | chr6_1:98352693-98352712 | Msa0901600:intron | 45.0% |
| AGCAACAAAGGATACAACCG+CGG | - | chr6_1:98352815-98352834 | Msa0901600:intron | 45.0% | |
| ! | TGACAAAGTCTTTGGCTCGT+CGG | - | chr6_1:98352871-98352890 | Msa0901600:intron | 45.0% |
| GATCGTCATGGAGCTACTTA+TGG | - | chr6_1:98352941-98352960 | Msa0901600:intron | 45.0% | |
| AGAACATTGAGGTGCGTCTT+GGG | - | chr6_1:98352991-98353010 | Msa0901600:intron | 45.0% | |
| !! | TCTGATGGTGTGGTGTTGTT+TGG | - | chr6_1:98353025-98353044 | Msa0901600:intron | 45.0% |
| !! | TGGTGTTGTTTGGAGGATGA+AGG | - | chr6_1:98353035-98353054 | Msa0901600:intron | 45.0% |
| TTGGAGGATGAAGGTGATGT+TGG | - | chr6_1:98353044-98353063 | Msa0901600:intron | 45.0% | |
| AAGGTGATGTTGGTCACCTT+GGG | - | chr6_1:98353054-98353073 | Msa0901600:intron | 45.0% | |
| TACTCATGATCAGTCTGGAG+AGG | - | chr6_1:98353155-98353174 | Msa0901600:intron | 45.0% | |
| TCATGATCTACCTGTTGAGG+TGG | - | chr6_1:98353193-98353212 | Msa0901600:intron | 45.0% | |
| CTCCATAGTCGTACCATTAC+CGG | + | chr6_1:98353303-98353322 | None:intergenic | 45.0% | |
| CTATGCTCTATGGTGAGCAA+GGG | - | chr6_1:98353334-98353353 | Msa0901600:intron | 45.0% | |
| GAATGTATAGCACGACTTGC+GGG | - | chr6_1:98353376-98353395 | Msa0901600:intron | 45.0% | |
| CAAGGAGACCTTCAAGGAAA+CGG | - | chr6_1:98353433-98353452 | Msa0901600:intron | 45.0% | |
| AAGGAGACCTTCAAGGAAAC+GGG | - | chr6_1:98353434-98353453 | Msa0901600:intron | 45.0% | |
| GTCCTGTGTTGAAGATGTCA+TGG | - | chr6_1:98353461-98353480 | Msa0901600:intron | 45.0% | |
| CACCATGACATCTTCAACAC+AGG | + | chr6_1:98353466-98353485 | None:intergenic | 45.0% | |
| GATGTCATGGTGAATGCTTG+TGG | - | chr6_1:98353474-98353493 | Msa0901600:intron | 45.0% | |
| CCTTGTAGTCTAACTACGCT+AGG | + | chr6_1:98353514-98353533 | None:intergenic | 45.0% | |
| CCTAGCGTAGTTAGACTACA+AGG | - | chr6_1:98353511-98353530 | Msa0901600:intron | 45.0% | |
| ! | CTCTAAAAGCCAAGGGTGAT+TGG | - | chr6_1:98353598-98353617 | Msa0901600:intron | 45.0% |
| TGGGAACAGGTAGATCTTCA+AGG | - | chr6_1:98353618-98353637 | Msa0901600:intron | 45.0% | |
| CAGGTAGATCTTCAAGGAAG+CGG | - | chr6_1:98353624-98353643 | Msa0901600:intron | 45.0% | |
| AGGTAGATCTTCAAGGAAGC+GGG | - | chr6_1:98353625-98353644 | Msa0901600:intron | 45.0% | |
| GTCTCGTGTTGAAGAGGTTA+TGG | - | chr6_1:98353652-98353671 | Msa0901600:intron | 45.0% | |
| GAGGTTATGGTAAAGGCTTG+TGG | - | chr6_1:98353665-98353684 | Msa0901600:intron | 45.0% | |
| ! | CCAACTACGCCAGGAATTTT+AGG | + | chr6_1:98353696-98353715 | None:intergenic | 45.0% |
| CCTAAAATTCCTGGCGTAGT+TGG | - | chr6_1:98353693-98353712 | Msa0901600:intron | 45.0% | |
| GACTGCAAGTATCTTCGAGA+AGG | - | chr6_1:98353715-98353734 | Msa0901600:intron | 45.0% | |
| TGCAAGTATCTTCGAGAAGG+CGG | - | chr6_1:98353718-98353737 | Msa0901600:intron | 45.0% | |
| GAGGTTAGGGTGTAAACTTG+TGG | - | chr6_1:98353761-98353780 | Msa0901600:intron | 45.0% | |
| TGTAAACTTGTGGAGCTGCT+TGG | - | chr6_1:98353771-98353790 | Msa0901600:intron | 45.0% | |
| TCCCAAAGACAGCCAAAATC+GGG | + | chr6_1:98351924-98351943 | None:intergenic | 45.0% | |
| CTCCCAAAGACAGCCAAAAT+CGG | + | chr6_1:98351925-98351944 | None:intergenic | 45.0% | |
| CAGTGTAAACCTGGAGATAG+AGG | - | chr6_1:98352091-98352110 | Msa0901600:intron | 45.0% | |
| GTGTAAACCTGGAGATAGAG+GGG | - | chr6_1:98352093-98352112 | Msa0901600:intron | 45.0% | |
| TGTAAACCTGGAGATAGAGG+GGG | - | chr6_1:98352094-98352113 | Msa0901600:intron | 45.0% | |
| GGATTGAGTCTCTTGGTTAC+GGG | - | chr6_1:98352226-98352245 | Msa0901600:intron | 45.0% | |
| GCTGGGATTTGGGTAGAATT+AGG | - | chr6_1:98352254-98352273 | Msa0901600:intron | 45.0% | |
| GGGATTTGGGTAGAATTAGG+CGG | - | chr6_1:98352257-98352276 | Msa0901600:intron | 45.0% | |
| GGATTTGGGTAGAATTAGGC+GGG | - | chr6_1:98352258-98352277 | Msa0901600:intron | 45.0% | |
| ! | CTCATCATATAGTGGAACGG+AGG | - | chr6_1:98352318-98352337 | Msa0901600:intron | 45.0% |
| TCCAAATTGACCTAGTCTGG+GGG | + | chr6_1:98352354-98352373 | None:intergenic | 45.0% | |
| GTCCAAATTGACCTAGTCTG+GGG | + | chr6_1:98352355-98352374 | None:intergenic | 45.0% | |
| GGTCCAAATTGACCTAGTCT+GGG | + | chr6_1:98352356-98352375 | None:intergenic | 45.0% | |
| TAGGTCAATTTGGACCGAAC+TGG | - | chr6_1:98352360-98352379 | Msa0901600:intron | 45.0% | |
| AGGTCAATTTGGACCGAACT+GGG | - | chr6_1:98352361-98352380 | Msa0901600:intron | 45.0% | |
| CAACTTGATGTGTGGAGCAA+GGG | + | chr6_1:98352498-98352517 | None:intergenic | 45.0% | |
| ACAACTTGATGTGTGGAGCA+AGG | + | chr6_1:98352499-98352518 | None:intergenic | 45.0% | |
| TAGTACCATGGGTTCGAAGT+GGG | - | chr6_1:98352590-98352609 | Msa0901600:intron | 45.0% | |
| AATATCCCACTTCGAACCCA+TGG | + | chr6_1:98352598-98352617 | None:intergenic | 45.0% | |
| !! | GAGAAAGCTTTGAAGGGTGA+AGG | - | chr6_1:98352693-98352712 | Msa0901600:intron | 45.0% |
| AGCAACAAAGGATACAACCG+CGG | - | chr6_1:98352815-98352834 | Msa0901600:intron | 45.0% | |
| ! | TGACAAAGTCTTTGGCTCGT+CGG | - | chr6_1:98352871-98352890 | Msa0901600:intron | 45.0% |
| GATCGTCATGGAGCTACTTA+TGG | - | chr6_1:98352941-98352960 | Msa0901600:intron | 45.0% | |
| AGAACATTGAGGTGCGTCTT+GGG | - | chr6_1:98352991-98353010 | Msa0901600:intron | 45.0% | |
| !! | TCTGATGGTGTGGTGTTGTT+TGG | - | chr6_1:98353025-98353044 | Msa0901600:intron | 45.0% |
| !! | TGGTGTTGTTTGGAGGATGA+AGG | - | chr6_1:98353035-98353054 | Msa0901600:intron | 45.0% |
| TTGGAGGATGAAGGTGATGT+TGG | - | chr6_1:98353044-98353063 | Msa0901600:intron | 45.0% | |
| AAGGTGATGTTGGTCACCTT+GGG | - | chr6_1:98353054-98353073 | Msa0901600:intron | 45.0% | |
| TACTCATGATCAGTCTGGAG+AGG | - | chr6_1:98353155-98353174 | Msa0901600:intron | 45.0% | |
| TCATGATCTACCTGTTGAGG+TGG | - | chr6_1:98353193-98353212 | Msa0901600:intron | 45.0% | |
| CTCCATAGTCGTACCATTAC+CGG | + | chr6_1:98353303-98353322 | None:intergenic | 45.0% | |
| CTATGCTCTATGGTGAGCAA+GGG | - | chr6_1:98353334-98353353 | Msa0901600:intron | 45.0% | |
| GAATGTATAGCACGACTTGC+GGG | - | chr6_1:98353376-98353395 | Msa0901600:intron | 45.0% | |
| CAAGGAGACCTTCAAGGAAA+CGG | - | chr6_1:98353433-98353452 | Msa0901600:intron | 45.0% | |
| AAGGAGACCTTCAAGGAAAC+GGG | - | chr6_1:98353434-98353453 | Msa0901600:intron | 45.0% | |
| GTCCTGTGTTGAAGATGTCA+TGG | - | chr6_1:98353461-98353480 | Msa0901600:intron | 45.0% | |
| CACCATGACATCTTCAACAC+AGG | + | chr6_1:98353466-98353485 | None:intergenic | 45.0% | |
| GATGTCATGGTGAATGCTTG+TGG | - | chr6_1:98353474-98353493 | Msa0901600:intron | 45.0% | |
| CCTTGTAGTCTAACTACGCT+AGG | + | chr6_1:98353514-98353533 | None:intergenic | 45.0% | |
| CCTAGCGTAGTTAGACTACA+AGG | - | chr6_1:98353511-98353530 | Msa0901600:intron | 45.0% | |
| ! | CTCTAAAAGCCAAGGGTGAT+TGG | - | chr6_1:98353598-98353617 | Msa0901600:intron | 45.0% |
| TGGGAACAGGTAGATCTTCA+AGG | - | chr6_1:98353618-98353637 | Msa0901600:intron | 45.0% | |
| CAGGTAGATCTTCAAGGAAG+CGG | - | chr6_1:98353624-98353643 | Msa0901600:intron | 45.0% | |
| AGGTAGATCTTCAAGGAAGC+GGG | - | chr6_1:98353625-98353644 | Msa0901600:intron | 45.0% | |
| GTCTCGTGTTGAAGAGGTTA+TGG | - | chr6_1:98353652-98353671 | Msa0901600:intron | 45.0% | |
| GAGGTTATGGTAAAGGCTTG+TGG | - | chr6_1:98353665-98353684 | Msa0901600:intron | 45.0% | |
| ! | CCAACTACGCCAGGAATTTT+AGG | + | chr6_1:98353696-98353715 | None:intergenic | 45.0% |
| CCTAAAATTCCTGGCGTAGT+TGG | - | chr6_1:98353693-98353712 | Msa0901600:intron | 45.0% | |
| GACTGCAAGTATCTTCGAGA+AGG | - | chr6_1:98353715-98353734 | Msa0901600:intron | 45.0% | |
| TGCAAGTATCTTCGAGAAGG+CGG | - | chr6_1:98353718-98353737 | Msa0901600:intron | 45.0% | |
| GAGGTTAGGGTGTAAACTTG+TGG | - | chr6_1:98353761-98353780 | Msa0901600:intron | 45.0% | |
| TGTAAACTTGTGGAGCTGCT+TGG | - | chr6_1:98353771-98353790 | Msa0901600:intron | 45.0% | |
| TCCCAAAGACAGCCAAAATC+GGG | + | chr6_1:98351924-98351943 | None:intergenic | 45.0% | |
| CTCCCAAAGACAGCCAAAAT+CGG | + | chr6_1:98351925-98351944 | None:intergenic | 45.0% | |
| CAGTGTAAACCTGGAGATAG+AGG | - | chr6_1:98352091-98352110 | Msa0901600:intron | 45.0% | |
| GTGTAAACCTGGAGATAGAG+GGG | - | chr6_1:98352093-98352112 | Msa0901600:intron | 45.0% | |
| TGTAAACCTGGAGATAGAGG+GGG | - | chr6_1:98352094-98352113 | Msa0901600:intron | 45.0% | |
| GGATTGAGTCTCTTGGTTAC+GGG | - | chr6_1:98352226-98352245 | Msa0901600:intron | 45.0% | |
| GCTGGGATTTGGGTAGAATT+AGG | - | chr6_1:98352254-98352273 | Msa0901600:intron | 45.0% | |
| GGGATTTGGGTAGAATTAGG+CGG | - | chr6_1:98352257-98352276 | Msa0901600:intron | 45.0% | |
| GGATTTGGGTAGAATTAGGC+GGG | - | chr6_1:98352258-98352277 | Msa0901600:intron | 45.0% | |
| ! | CTCATCATATAGTGGAACGG+AGG | - | chr6_1:98352318-98352337 | Msa0901600:intron | 45.0% |
| TCCAAATTGACCTAGTCTGG+GGG | + | chr6_1:98352354-98352373 | None:intergenic | 45.0% | |
| GTCCAAATTGACCTAGTCTG+GGG | + | chr6_1:98352355-98352374 | None:intergenic | 45.0% | |
| GGTCCAAATTGACCTAGTCT+GGG | + | chr6_1:98352356-98352375 | None:intergenic | 45.0% | |
| TAGGTCAATTTGGACCGAAC+TGG | - | chr6_1:98352360-98352379 | Msa0901600:intron | 45.0% | |
| AGGTCAATTTGGACCGAACT+GGG | - | chr6_1:98352361-98352380 | Msa0901600:intron | 45.0% | |
| CAACTTGATGTGTGGAGCAA+GGG | + | chr6_1:98352498-98352517 | None:intergenic | 45.0% | |
| ACAACTTGATGTGTGGAGCA+AGG | + | chr6_1:98352499-98352518 | None:intergenic | 45.0% | |
| AGACTCTCAGCCATTGTTTG+TGG | + | chr6_1:98356645-98356664 | None:intergenic | 45.0% | |
| GCTGCCATTGTCTGCTTCAT+CGG | + | chr6_1:98351553-98351572 | None:intergenic | 50.0% | |
| ! | GAAAAATCGGGGCCCGATTT+TGG | - | chr6_1:98351909-98351928 | Msa0901600:intron | 50.0% |
| !!! | GCCCGATTTTGGCTGTCTTT+GGG | - | chr6_1:98351920-98351939 | Msa0901600:intron | 50.0% |
| ! | CTTTGGGAGCAGTTTGGTAC+TGG | - | chr6_1:98351936-98351955 | Msa0901600:intron | 50.0% |
| GGCGCCCGAATGGTAAAAAT+CGG | - | chr6_1:98351966-98351985 | Msa0901600:intron | 50.0% | |
| GCGCCCGAATGGTAAAAATC+GGG | - | chr6_1:98351967-98351986 | Msa0901600:intron | 50.0% | |
| CGCCCGAATGGTAAAAATCG+GGG | - | chr6_1:98351968-98351987 | Msa0901600:intron | 50.0% | |
| ! | GGCCCCGATTTTTACCATTC+GGG | + | chr6_1:98351973-98351992 | None:intergenic | 50.0% |
| ! | GGGCCCCGATTTTTACCATT+CGG | + | chr6_1:98351974-98351993 | None:intergenic | 50.0% |
| AGATAGAGGGGGCTGAAACA+AGG | - | chr6_1:98352105-98352124 | Msa0901600:intron | 50.0% | |
| GATAGAGGGGGCTGAAACAA+GGG | - | chr6_1:98352106-98352125 | Msa0901600:intron | 50.0% | |
| AGTCTCTTGGTTACGGGAAG+AGG | - | chr6_1:98352232-98352251 | Msa0901600:intron | 50.0% | |
| TCCCCCAGACTAGGTCAATT+TGG | - | chr6_1:98352350-98352369 | Msa0901600:intron | 50.0% | |
| CGGTCCAAATTGACCTAGTC+TGG | + | chr6_1:98352357-98352376 | None:intergenic | 50.0% | |
| ATCCTTTGACCTTTGCCCCA+CGG | + | chr6_1:98352566-98352585 | None:intergenic | 50.0% | |
| CTAGTACCATGGGTTCGAAG+TGG | - | chr6_1:98352589-98352608 | Msa0901600:intron | 50.0% | |
| GAAGGGTGAAGGTTCGTTAC+CGG | - | chr6_1:98352704-98352723 | Msa0901600:intron | 50.0% | |
| ! | AGTGCCATTGTCTTGTGCCT+CGG | - | chr6_1:98352774-98352793 | Msa0901600:intron | 50.0% |
| ATCTCCGAGGCACAAGACAA+TGG | + | chr6_1:98352781-98352800 | None:intergenic | 50.0% | |
| GAGAACATTGAGGTGCGTCT+TGG | - | chr6_1:98352990-98353009 | Msa0901600:intron | 50.0% | |
| GAACATTGAGGTGCGTCTTG+GGG | - | chr6_1:98352992-98353011 | Msa0901600:intron | 50.0% | |
| !! | GATGGTGTGGTGTTGTTTGG+AGG | - | chr6_1:98353028-98353047 | Msa0901600:intron | 50.0% |
| GAAGGTGATGTTGGTCACCT+TGG | - | chr6_1:98353053-98353072 | Msa0901600:intron | 50.0% | |
| ACCTTGGGATTGATGCCTAG+TGG | - | chr6_1:98353069-98353088 | Msa0901600:intron | 50.0% | |
| TCCACTAGGCATCAATCCCA+AGG | + | chr6_1:98353073-98353092 | None:intergenic | 50.0% | |
| TCATGATCAGTCTGGAGAGG+CGG | - | chr6_1:98353158-98353177 | Msa0901600:intron | 50.0% | |
| TGAGGTGGAGTTGAACACAC+CGG | - | chr6_1:98353281-98353300 | Msa0901600:intron | 50.0% | |
| GGAGTTGAACACACCGGTAA+TGG | - | chr6_1:98353287-98353306 | Msa0901600:intron | 50.0% | |
| ! | CACCGGTAATGGTACGACTA+TGG | - | chr6_1:98353298-98353317 | Msa0901600:intron | 50.0% |
| ! | CGGTAATGGTACGACTATGG+AGG | - | chr6_1:98353301-98353320 | Msa0901600:intron | 50.0% |
| GTACGACTATGGAGGACCTT+GGG | - | chr6_1:98353309-98353328 | Msa0901600:intron | 50.0% | |
| ! | ACCTTGGGTGCTATGCTCTA+TGG | - | chr6_1:98353324-98353343 | Msa0901600:intron | 50.0% |
| ACCATAGAGCATAGCACCCA+AGG | + | chr6_1:98353328-98353347 | None:intergenic | 50.0% | |
| GCTATGCTCTATGGTGAGCA+AGG | - | chr6_1:98353333-98353352 | Msa0901600:intron | 50.0% | |
| TCCTTGCATCCAATCACCCT+TGG | + | chr6_1:98353419-98353438 | None:intergenic | 50.0% | |
| TGGATGCAAGGAGACCTTCA+AGG | - | chr6_1:98353427-98353446 | Msa0901600:intron | 50.0% | |
| GACATCTCCCGTTTCCTTGA+AGG | + | chr6_1:98353444-98353463 | None:intergenic | 50.0% | |
| GACTACAAGGACCTTCGAGA+AGG | - | chr6_1:98353524-98353543 | Msa0901600:intron | 50.0% | |
| TACAAGGACCTTCGAGAAGG+CGG | - | chr6_1:98353527-98353546 | Msa0901600:intron | 50.0% | |
| AATGTCTTCCGCCTTCTCGA+AGG | + | chr6_1:98353538-98353557 | None:intergenic | 50.0% | |
| AAGACATTCCGAGGGCTGAA+GGG | - | chr6_1:98353550-98353569 | Msa0901600:intron | 50.0% | |
| ! | GGATGGGAGGTGTATACTTG+TGG | - | chr6_1:98353571-98353590 | Msa0901600:intron | 50.0% |
| TACCTGTTCCCAATCACCCT+TGG | + | chr6_1:98353610-98353629 | None:intergenic | 50.0% | |
| GGAGATGTCTCGTGTTGAAG+AGG | - | chr6_1:98353646-98353665 | Msa0901600:intron | 50.0% | |
| AGACATTCCGATGGCTGAAG+AGG | - | chr6_1:98353742-98353761 | Msa0901600:intron | 50.0% | |
| TTCCGATGGCTGAAGAGGTT+AGG | - | chr6_1:98353747-98353766 | Msa0901600:intron | 50.0% | |
| TCCGATGGCTGAAGAGGTTA+GGG | - | chr6_1:98353748-98353767 | Msa0901600:intron | 50.0% | |
| ACCCTAACCTCTTCAGCCAT+CGG | + | chr6_1:98353752-98353771 | None:intergenic | 50.0% | |
| !! | TGCTTGGTGTAGTGGGAACA+AGG | - | chr6_1:98353787-98353806 | Msa0901600:intron | 50.0% |
| !! | GCTTGGTGTAGTGGGAACAA+GGG | - | chr6_1:98353788-98353807 | Msa0901600:intron | 50.0% |
| GAACAAGGGAAAGAGCAGCA+AGG | - | chr6_1:98353802-98353821 | Msa0901600:intron | 50.0% | |
| ! | GAAAAATCGGGGCCCGATTT+TGG | - | chr6_1:98351909-98351928 | Msa0901600:intron | 50.0% |
| !!! | GCCCGATTTTGGCTGTCTTT+GGG | - | chr6_1:98351920-98351939 | Msa0901600:intron | 50.0% |
| ! | CTTTGGGAGCAGTTTGGTAC+TGG | - | chr6_1:98351936-98351955 | Msa0901600:intron | 50.0% |
| GGCGCCCGAATGGTAAAAAT+CGG | - | chr6_1:98351966-98351985 | Msa0901600:intron | 50.0% | |
| GCGCCCGAATGGTAAAAATC+GGG | - | chr6_1:98351967-98351986 | Msa0901600:intron | 50.0% | |
| CGCCCGAATGGTAAAAATCG+GGG | - | chr6_1:98351968-98351987 | Msa0901600:intron | 50.0% | |
| ! | GGCCCCGATTTTTACCATTC+GGG | + | chr6_1:98351973-98351992 | None:intergenic | 50.0% |
| ! | GGGCCCCGATTTTTACCATT+CGG | + | chr6_1:98351974-98351993 | None:intergenic | 50.0% |
| AGATAGAGGGGGCTGAAACA+AGG | - | chr6_1:98352105-98352124 | Msa0901600:intron | 50.0% | |
| GATAGAGGGGGCTGAAACAA+GGG | - | chr6_1:98352106-98352125 | Msa0901600:intron | 50.0% | |
| AGTCTCTTGGTTACGGGAAG+AGG | - | chr6_1:98352232-98352251 | Msa0901600:intron | 50.0% | |
| TCCCCCAGACTAGGTCAATT+TGG | - | chr6_1:98352350-98352369 | Msa0901600:intron | 50.0% | |
| CGGTCCAAATTGACCTAGTC+TGG | + | chr6_1:98352357-98352376 | None:intergenic | 50.0% | |
| ATCCTTTGACCTTTGCCCCA+CGG | + | chr6_1:98352566-98352585 | None:intergenic | 50.0% | |
| CTAGTACCATGGGTTCGAAG+TGG | - | chr6_1:98352589-98352608 | Msa0901600:intron | 50.0% | |
| GAAGGGTGAAGGTTCGTTAC+CGG | - | chr6_1:98352704-98352723 | Msa0901600:intron | 50.0% | |
| ! | AGTGCCATTGTCTTGTGCCT+CGG | - | chr6_1:98352774-98352793 | Msa0901600:intron | 50.0% |
| ATCTCCGAGGCACAAGACAA+TGG | + | chr6_1:98352781-98352800 | None:intergenic | 50.0% | |
| GAGAACATTGAGGTGCGTCT+TGG | - | chr6_1:98352990-98353009 | Msa0901600:intron | 50.0% | |
| GAACATTGAGGTGCGTCTTG+GGG | - | chr6_1:98352992-98353011 | Msa0901600:intron | 50.0% | |
| !! | GATGGTGTGGTGTTGTTTGG+AGG | - | chr6_1:98353028-98353047 | Msa0901600:intron | 50.0% |
| GAAGGTGATGTTGGTCACCT+TGG | - | chr6_1:98353053-98353072 | Msa0901600:intron | 50.0% | |
| ACCTTGGGATTGATGCCTAG+TGG | - | chr6_1:98353069-98353088 | Msa0901600:intron | 50.0% | |
| TCCACTAGGCATCAATCCCA+AGG | + | chr6_1:98353073-98353092 | None:intergenic | 50.0% | |
| TCATGATCAGTCTGGAGAGG+CGG | - | chr6_1:98353158-98353177 | Msa0901600:intron | 50.0% | |
| TGAGGTGGAGTTGAACACAC+CGG | - | chr6_1:98353281-98353300 | Msa0901600:intron | 50.0% | |
| GGAGTTGAACACACCGGTAA+TGG | - | chr6_1:98353287-98353306 | Msa0901600:intron | 50.0% | |
| ! | CACCGGTAATGGTACGACTA+TGG | - | chr6_1:98353298-98353317 | Msa0901600:intron | 50.0% |
| ! | CGGTAATGGTACGACTATGG+AGG | - | chr6_1:98353301-98353320 | Msa0901600:intron | 50.0% |
| GTACGACTATGGAGGACCTT+GGG | - | chr6_1:98353309-98353328 | Msa0901600:intron | 50.0% | |
| ! | ACCTTGGGTGCTATGCTCTA+TGG | - | chr6_1:98353324-98353343 | Msa0901600:intron | 50.0% |
| ACCATAGAGCATAGCACCCA+AGG | + | chr6_1:98353328-98353347 | None:intergenic | 50.0% | |
| GCTATGCTCTATGGTGAGCA+AGG | - | chr6_1:98353333-98353352 | Msa0901600:intron | 50.0% | |
| TCCTTGCATCCAATCACCCT+TGG | + | chr6_1:98353419-98353438 | None:intergenic | 50.0% | |
| TGGATGCAAGGAGACCTTCA+AGG | - | chr6_1:98353427-98353446 | Msa0901600:intron | 50.0% | |
| GACATCTCCCGTTTCCTTGA+AGG | + | chr6_1:98353444-98353463 | None:intergenic | 50.0% | |
| GACTACAAGGACCTTCGAGA+AGG | - | chr6_1:98353524-98353543 | Msa0901600:intron | 50.0% | |
| TACAAGGACCTTCGAGAAGG+CGG | - | chr6_1:98353527-98353546 | Msa0901600:intron | 50.0% | |
| AATGTCTTCCGCCTTCTCGA+AGG | + | chr6_1:98353538-98353557 | None:intergenic | 50.0% | |
| AAGACATTCCGAGGGCTGAA+GGG | - | chr6_1:98353550-98353569 | Msa0901600:intron | 50.0% | |
| ! | GGATGGGAGGTGTATACTTG+TGG | - | chr6_1:98353571-98353590 | Msa0901600:intron | 50.0% |
| TACCTGTTCCCAATCACCCT+TGG | + | chr6_1:98353610-98353629 | None:intergenic | 50.0% | |
| GGAGATGTCTCGTGTTGAAG+AGG | - | chr6_1:98353646-98353665 | Msa0901600:intron | 50.0% | |
| AGACATTCCGATGGCTGAAG+AGG | - | chr6_1:98353742-98353761 | Msa0901600:intron | 50.0% | |
| TTCCGATGGCTGAAGAGGTT+AGG | - | chr6_1:98353747-98353766 | Msa0901600:intron | 50.0% | |
| TCCGATGGCTGAAGAGGTTA+GGG | - | chr6_1:98353748-98353767 | Msa0901600:intron | 50.0% | |
| ACCCTAACCTCTTCAGCCAT+CGG | + | chr6_1:98353752-98353771 | None:intergenic | 50.0% | |
| !! | TGCTTGGTGTAGTGGGAACA+AGG | - | chr6_1:98353787-98353806 | Msa0901600:intron | 50.0% |
| !! | GCTTGGTGTAGTGGGAACAA+GGG | - | chr6_1:98353788-98353807 | Msa0901600:intron | 50.0% |
| GAACAAGGGAAAGAGCAGCA+AGG | - | chr6_1:98353802-98353821 | Msa0901600:intron | 50.0% | |
| ! | GAAAAATCGGGGCCCGATTT+TGG | - | chr6_1:98351909-98351928 | Msa0901600:intron | 50.0% |
| !!! | GCCCGATTTTGGCTGTCTTT+GGG | - | chr6_1:98351920-98351939 | Msa0901600:intron | 50.0% |
| ! | CTTTGGGAGCAGTTTGGTAC+TGG | - | chr6_1:98351936-98351955 | Msa0901600:intron | 50.0% |
| GGCGCCCGAATGGTAAAAAT+CGG | - | chr6_1:98351966-98351985 | Msa0901600:intron | 50.0% | |
| GCGCCCGAATGGTAAAAATC+GGG | - | chr6_1:98351967-98351986 | Msa0901600:intron | 50.0% | |
| CGCCCGAATGGTAAAAATCG+GGG | - | chr6_1:98351968-98351987 | Msa0901600:intron | 50.0% | |
| ! | GGCCCCGATTTTTACCATTC+GGG | + | chr6_1:98351973-98351992 | None:intergenic | 50.0% |
| ! | GGGCCCCGATTTTTACCATT+CGG | + | chr6_1:98351974-98351993 | None:intergenic | 50.0% |
| AGATAGAGGGGGCTGAAACA+AGG | - | chr6_1:98352105-98352124 | Msa0901600:intron | 50.0% | |
| GATAGAGGGGGCTGAAACAA+GGG | - | chr6_1:98352106-98352125 | Msa0901600:intron | 50.0% | |
| AGTCTCTTGGTTACGGGAAG+AGG | - | chr6_1:98352232-98352251 | Msa0901600:intron | 50.0% | |
| TCCCCCAGACTAGGTCAATT+TGG | - | chr6_1:98352350-98352369 | Msa0901600:intron | 50.0% | |
| CGGTCCAAATTGACCTAGTC+TGG | + | chr6_1:98352357-98352376 | None:intergenic | 50.0% | |
| AGTACAAATCGGGGCCCGAA+TGG | - | chr6_1:98351887-98351906 | Msa0901600:intron | 55.0% | |
| CGGGGCCCGAATGGAAAAAT+CGG | - | chr6_1:98351896-98351915 | Msa0901600:intron | 55.0% | |
| GGGGCCCGAATGGAAAAATC+GGG | - | chr6_1:98351897-98351916 | Msa0901600:intron | 55.0% | |
| GGGCCCGAATGGAAAAATCG+GGG | - | chr6_1:98351898-98351917 | Msa0901600:intron | 55.0% | |
| ! | GGGCCCCGATTTTTCCATTC+GGG | + | chr6_1:98351904-98351923 | None:intergenic | 55.0% |
| ! | CGGGCCCCGATTTTTCCATT+CGG | + | chr6_1:98351905-98351924 | None:intergenic | 55.0% |
| !!! | GGCCCGATTTTGGCTGTCTT+TGG | - | chr6_1:98351919-98351938 | Msa0901600:intron | 55.0% |
| ! | GGCTGTCTTTGGGAGCAGTT+TGG | - | chr6_1:98351930-98351949 | Msa0901600:intron | 55.0% |
| TGGAAAAATCGGCGCCCGAA+TGG | - | chr6_1:98351956-98351975 | Msa0901600:intron | 55.0% | |
| TTTCAGCCCCCTCTATCTCC+AGG | + | chr6_1:98352103-98352122 | None:intergenic | 55.0% | |
| TCTTGGTTACGGGAAGAGGC+TGG | - | chr6_1:98352236-98352255 | Msa0901600:intron | 55.0% | |
| CTTGGTTACGGGAAGAGGCT+GGG | - | chr6_1:98352237-98352256 | Msa0901600:intron | 55.0% | |
| TACGGGAAGAGGCTGGGATT+TGG | - | chr6_1:98352243-98352262 | Msa0901600:intron | 55.0% | |
| ACGGGAAGAGGCTGGGATTT+GGG | - | chr6_1:98352244-98352263 | Msa0901600:intron | 55.0% | |
| TTTGACCTTTGCCCCACGGT+GGG | + | chr6_1:98352562-98352581 | None:intergenic | 55.0% | |
| !! | GAAGACCGAGATGGTGGACA+AGG | - | chr6_1:98352746-98352765 | Msa0901600:intron | 55.0% |
| GCACAAGACAATGGCACTCC+TGG | + | chr6_1:98352772-98352791 | None:intergenic | 55.0% | |
| !! | ATACAACCGCGGCATCGATG+TGG | - | chr6_1:98352826-98352845 | Msa0901600:intron | 55.0% |
| CTTTGACCACATCGATGCCG+CGG | + | chr6_1:98352835-98352854 | None:intergenic | 55.0% | |
| GGGATTGATGCCTAGTGGAG+CGG | - | chr6_1:98353074-98353093 | Msa0901600:intron | 55.0% | |
| ATTGATGCCTAGTGGAGCGG+TGG | - | chr6_1:98353077-98353096 | Msa0901600:intron | 55.0% | |
| CACTCAACATCAGCCTGGAG+AGG | - | chr6_1:98353120-98353139 | Msa0901600:intron | 55.0% | |
| TCAACATCAGCCTGGAGAGG+CGG | - | chr6_1:98353123-98353142 | Msa0901600:intron | 55.0% | |
| ATTCTTACCACCGCCTCTCC+AGG | + | chr6_1:98353136-98353155 | None:intergenic | 55.0% | |
| CCTTGCAACTCCACCTCAAC+AGG | + | chr6_1:98353206-98353225 | None:intergenic | 55.0% | |
| CCTGTTGAGGTGGAGTTGCA+AGG | - | chr6_1:98353203-98353222 | Msa0901600:intron | 55.0% | |
| GGTAGAGTACGCTCAGCTTG+AGG | - | chr6_1:98353263-98353282 | Msa0901600:intron | 55.0% | |
| AGAGTACGCTCAGCTTGAGG+TGG | - | chr6_1:98353266-98353285 | Msa0901600:intron | 55.0% | |
| GGTACGACTATGGAGGACCT+TGG | - | chr6_1:98353308-98353327 | Msa0901600:intron | 55.0% | |
| GCCAAGGGTGATTGGATGCA+AGG | - | chr6_1:98353415-98353434 | Msa0901600:intron | 55.0% | |
| AGAAGGCGGAAGACATTCCG+AGG | - | chr6_1:98353541-98353560 | Msa0901600:intron | 55.0% | |
| GAAGGCGGAAGACATTCCGA+GGG | - | chr6_1:98353542-98353561 | Msa0901600:intron | 55.0% | |
| GAAGACATTCCGAGGGCTGA+AGG | - | chr6_1:98353549-98353568 | Msa0901600:intron | 55.0% | |
| ATTCCGAGGGCTGAAGGGAT+GGG | - | chr6_1:98353555-98353574 | Msa0901600:intron | 55.0% | |
| AGCCAAGGGTGATTGGGAAC+AGG | - | chr6_1:98353605-98353624 | Msa0901600:intron | 55.0% | |
| ACTTGCAGTCCAACTACGCC+AGG | + | chr6_1:98353705-98353724 | None:intergenic | 55.0% | |
| GAAGGCGGAAGACATTCCGA+TGG | - | chr6_1:98353542-98353561 | Msa0901600:intron | 55.0% | |
| !! | TGTGGAGCTGCTTGGTGTAG+TGG | - | chr6_1:98353779-98353798 | Msa0901600:intron | 55.0% |
| !! | GTGGAGCTGCTTGGTGTAGT+GGG | - | chr6_1:98353780-98353799 | Msa0901600:intron | 55.0% |
| AGTACAAATCGGGGCCCGAA+TGG | - | chr6_1:98351887-98351906 | Msa0901600:intron | 55.0% | |
| CGGGGCCCGAATGGAAAAAT+CGG | - | chr6_1:98351896-98351915 | Msa0901600:intron | 55.0% | |
| GGGGCCCGAATGGAAAAATC+GGG | - | chr6_1:98351897-98351916 | Msa0901600:intron | 55.0% | |
| GGGCCCGAATGGAAAAATCG+GGG | - | chr6_1:98351898-98351917 | Msa0901600:intron | 55.0% | |
| ! | GGGCCCCGATTTTTCCATTC+GGG | + | chr6_1:98351904-98351923 | None:intergenic | 55.0% |
| ! | CGGGCCCCGATTTTTCCATT+CGG | + | chr6_1:98351905-98351924 | None:intergenic | 55.0% |
| !!! | GGCCCGATTTTGGCTGTCTT+TGG | - | chr6_1:98351919-98351938 | Msa0901600:intron | 55.0% |
| ! | GGCTGTCTTTGGGAGCAGTT+TGG | - | chr6_1:98351930-98351949 | Msa0901600:intron | 55.0% |
| TGGAAAAATCGGCGCCCGAA+TGG | - | chr6_1:98351956-98351975 | Msa0901600:intron | 55.0% | |
| TTTCAGCCCCCTCTATCTCC+AGG | + | chr6_1:98352103-98352122 | None:intergenic | 55.0% | |
| TCTTGGTTACGGGAAGAGGC+TGG | - | chr6_1:98352236-98352255 | Msa0901600:intron | 55.0% | |
| CTTGGTTACGGGAAGAGGCT+GGG | - | chr6_1:98352237-98352256 | Msa0901600:intron | 55.0% | |
| TACGGGAAGAGGCTGGGATT+TGG | - | chr6_1:98352243-98352262 | Msa0901600:intron | 55.0% | |
| ACGGGAAGAGGCTGGGATTT+GGG | - | chr6_1:98352244-98352263 | Msa0901600:intron | 55.0% | |
| TTTGACCTTTGCCCCACGGT+GGG | + | chr6_1:98352562-98352581 | None:intergenic | 55.0% | |
| !! | GAAGACCGAGATGGTGGACA+AGG | - | chr6_1:98352746-98352765 | Msa0901600:intron | 55.0% |
| GCACAAGACAATGGCACTCC+TGG | + | chr6_1:98352772-98352791 | None:intergenic | 55.0% | |
| !! | ATACAACCGCGGCATCGATG+TGG | - | chr6_1:98352826-98352845 | Msa0901600:intron | 55.0% |
| CTTTGACCACATCGATGCCG+CGG | + | chr6_1:98352835-98352854 | None:intergenic | 55.0% | |
| GGGATTGATGCCTAGTGGAG+CGG | - | chr6_1:98353074-98353093 | Msa0901600:intron | 55.0% | |
| ATTGATGCCTAGTGGAGCGG+TGG | - | chr6_1:98353077-98353096 | Msa0901600:intron | 55.0% | |
| CACTCAACATCAGCCTGGAG+AGG | - | chr6_1:98353120-98353139 | Msa0901600:intron | 55.0% | |
| TCAACATCAGCCTGGAGAGG+CGG | - | chr6_1:98353123-98353142 | Msa0901600:intron | 55.0% | |
| ATTCTTACCACCGCCTCTCC+AGG | + | chr6_1:98353136-98353155 | None:intergenic | 55.0% | |
| CCTTGCAACTCCACCTCAAC+AGG | + | chr6_1:98353206-98353225 | None:intergenic | 55.0% | |
| CCTGTTGAGGTGGAGTTGCA+AGG | - | chr6_1:98353203-98353222 | Msa0901600:intron | 55.0% | |
| GGTAGAGTACGCTCAGCTTG+AGG | - | chr6_1:98353263-98353282 | Msa0901600:intron | 55.0% | |
| AGAGTACGCTCAGCTTGAGG+TGG | - | chr6_1:98353266-98353285 | Msa0901600:intron | 55.0% | |
| GGTACGACTATGGAGGACCT+TGG | - | chr6_1:98353308-98353327 | Msa0901600:intron | 55.0% | |
| GCCAAGGGTGATTGGATGCA+AGG | - | chr6_1:98353415-98353434 | Msa0901600:intron | 55.0% | |
| AGAAGGCGGAAGACATTCCG+AGG | - | chr6_1:98353541-98353560 | Msa0901600:intron | 55.0% | |
| GAAGGCGGAAGACATTCCGA+GGG | - | chr6_1:98353542-98353561 | Msa0901600:intron | 55.0% | |
| GAAGACATTCCGAGGGCTGA+AGG | - | chr6_1:98353549-98353568 | Msa0901600:intron | 55.0% | |
| ATTCCGAGGGCTGAAGGGAT+GGG | - | chr6_1:98353555-98353574 | Msa0901600:intron | 55.0% | |
| AGCCAAGGGTGATTGGGAAC+AGG | - | chr6_1:98353605-98353624 | Msa0901600:intron | 55.0% | |
| ACTTGCAGTCCAACTACGCC+AGG | + | chr6_1:98353705-98353724 | None:intergenic | 55.0% | |
| GAAGGCGGAAGACATTCCGA+TGG | - | chr6_1:98353542-98353561 | Msa0901600:intron | 55.0% | |
| !! | TGTGGAGCTGCTTGGTGTAG+TGG | - | chr6_1:98353779-98353798 | Msa0901600:intron | 55.0% |
| !! | GTGGAGCTGCTTGGTGTAGT+GGG | - | chr6_1:98353780-98353799 | Msa0901600:intron | 55.0% |
| AGTACAAATCGGGGCCCGAA+TGG | - | chr6_1:98351887-98351906 | Msa0901600:intron | 55.0% | |
| CGGGGCCCGAATGGAAAAAT+CGG | - | chr6_1:98351896-98351915 | Msa0901600:intron | 55.0% | |
| GGGGCCCGAATGGAAAAATC+GGG | - | chr6_1:98351897-98351916 | Msa0901600:intron | 55.0% | |
| GGGCCCGAATGGAAAAATCG+GGG | - | chr6_1:98351898-98351917 | Msa0901600:intron | 55.0% | |
| ! | GGGCCCCGATTTTTCCATTC+GGG | + | chr6_1:98351904-98351923 | None:intergenic | 55.0% |
| ! | CGGGCCCCGATTTTTCCATT+CGG | + | chr6_1:98351905-98351924 | None:intergenic | 55.0% |
| !!! | GGCCCGATTTTGGCTGTCTT+TGG | - | chr6_1:98351919-98351938 | Msa0901600:intron | 55.0% |
| ! | GGCTGTCTTTGGGAGCAGTT+TGG | - | chr6_1:98351930-98351949 | Msa0901600:intron | 55.0% |
| TGGAAAAATCGGCGCCCGAA+TGG | - | chr6_1:98351956-98351975 | Msa0901600:intron | 55.0% | |
| TTTCAGCCCCCTCTATCTCC+AGG | + | chr6_1:98352103-98352122 | None:intergenic | 55.0% | |
| TCTTGGTTACGGGAAGAGGC+TGG | - | chr6_1:98352236-98352255 | Msa0901600:intron | 55.0% | |
| CTTGGTTACGGGAAGAGGCT+GGG | - | chr6_1:98352237-98352256 | Msa0901600:intron | 55.0% | |
| TACGGGAAGAGGCTGGGATT+TGG | - | chr6_1:98352243-98352262 | Msa0901600:intron | 55.0% | |
| ACGGGAAGAGGCTGGGATTT+GGG | - | chr6_1:98352244-98352263 | Msa0901600:intron | 55.0% | |
| ACGGTGGGCGCCAATTGTTG+CGG | + | chr6_1:98352547-98352566 | None:intergenic | 60.0% | |
| CAACAATTGGCGCCCACCGT+GGG | - | chr6_1:98352547-98352566 | Msa0901600:intron | 60.0% | |
| AACAATTGGCGCCCACCGTG+GGG | - | chr6_1:98352548-98352567 | Msa0901600:intron | 60.0% | |
| CTTTGACCTTTGCCCCACGG+TGG | + | chr6_1:98352563-98352582 | None:intergenic | 60.0% | |
| CACCGTGGGGCAAAGGTCAA+AGG | - | chr6_1:98352561-98352580 | Msa0901600:intron | 60.0% | |
| ACCGGTCACCATGTCACGAG+CGG | - | chr6_1:98352722-98352741 | Msa0901600:intron | 60.0% | |
| TCCGCTCGTGACATGGTGAC+CGG | + | chr6_1:98352726-98352745 | None:intergenic | 60.0% | |
| GGTCTTCTCCGCTCGTGACA+TGG | + | chr6_1:98352733-98352752 | None:intergenic | 60.0% | |
| ACGAGCGGAGAAGACCGAGA+TGG | - | chr6_1:98352737-98352756 | Msa0901600:intron | 60.0% | |
| AGCGGAGAAGACCGAGATGG+TGG | - | chr6_1:98352740-98352759 | Msa0901600:intron | 60.0% | |
| !! | CCTGGCCTTGTCCACCATCT+CGG | + | chr6_1:98352754-98352773 | None:intergenic | 60.0% |
| TGAGGTGCGTCTTGGGGATG+CGG | - | chr6_1:98352998-98353017 | Msa0901600:intron | 60.0% | |
| ! | ATGCGGGTGCTCTGATGGTG+TGG | - | chr6_1:98353015-98353034 | Msa0901600:intron | 60.0% |
| TGATCAGTCTGGAGAGGCGG+AGG | - | chr6_1:98353161-98353180 | Msa0901600:intron | 60.0% | |
| CATTCCGAGGGCTGAAGGGA+TGG | - | chr6_1:98353554-98353573 | Msa0901600:intron | 60.0% | |
| ACGGTGGGCGCCAATTGTTG+CGG | + | chr6_1:98352547-98352566 | None:intergenic | 60.0% | |
| CAACAATTGGCGCCCACCGT+GGG | - | chr6_1:98352547-98352566 | Msa0901600:intron | 60.0% | |
| AACAATTGGCGCCCACCGTG+GGG | - | chr6_1:98352548-98352567 | Msa0901600:intron | 60.0% | |
| CTTTGACCTTTGCCCCACGG+TGG | + | chr6_1:98352563-98352582 | None:intergenic | 60.0% | |
| CACCGTGGGGCAAAGGTCAA+AGG | - | chr6_1:98352561-98352580 | Msa0901600:intron | 60.0% | |
| ACCGGTCACCATGTCACGAG+CGG | - | chr6_1:98352722-98352741 | Msa0901600:intron | 60.0% | |
| TCCGCTCGTGACATGGTGAC+CGG | + | chr6_1:98352726-98352745 | None:intergenic | 60.0% | |
| GGTCTTCTCCGCTCGTGACA+TGG | + | chr6_1:98352733-98352752 | None:intergenic | 60.0% | |
| ACGAGCGGAGAAGACCGAGA+TGG | - | chr6_1:98352737-98352756 | Msa0901600:intron | 60.0% | |
| AGCGGAGAAGACCGAGATGG+TGG | - | chr6_1:98352740-98352759 | Msa0901600:intron | 60.0% | |
| !! | CCTGGCCTTGTCCACCATCT+CGG | + | chr6_1:98352754-98352773 | None:intergenic | 60.0% |
| TGAGGTGCGTCTTGGGGATG+CGG | - | chr6_1:98352998-98353017 | Msa0901600:intron | 60.0% | |
| ! | ATGCGGGTGCTCTGATGGTG+TGG | - | chr6_1:98353015-98353034 | Msa0901600:intron | 60.0% |
| TGATCAGTCTGGAGAGGCGG+AGG | - | chr6_1:98353161-98353180 | Msa0901600:intron | 60.0% | |
| CATTCCGAGGGCTGAAGGGA+TGG | - | chr6_1:98353554-98353573 | Msa0901600:intron | 60.0% | |
| GCTGCTCTCTCCCCCAGACT+AGG | - | chr6_1:98352341-98352360 | Msa0901600:intron | 65.0% | |
| GCAACAATTGGCGCCCACCG+TGG | - | chr6_1:98352546-98352565 | Msa0901600:intron | 65.0% | |
| !! | CCGAGATGGTGGACAAGGCC+AGG | - | chr6_1:98352751-98352770 | Msa0901600:intron | 65.0% |
| GAGGTGCGTCTTGGGGATGC+GGG | - | chr6_1:98352999-98353018 | Msa0901600:intron | 65.0% | |
| TGGGGATGCGGGTGCTCTGA+TGG | - | chr6_1:98353010-98353029 | Msa0901600:intron | 65.0% | |
| CAGACGACCACCGCTCCACT+AGG | + | chr6_1:98353087-98353106 | None:intergenic | 65.0% | |
| CTAGTGGAGCGGTGGTCGTC+TGG | - | chr6_1:98353085-98353104 | Msa0901600:intron | 65.0% | |
| ACATCAGCCTGGAGAGGCGG+TGG | - | chr6_1:98353126-98353145 | Msa0901600:intron | 65.0% | |
| CCTCCCATCCCTTCAGCCCT+CGG | + | chr6_1:98353561-98353580 | None:intergenic | 65.0% | |
| GCTGCTCTCTCCCCCAGACT+AGG | - | chr6_1:98352341-98352360 | Msa0901600:intron | 65.0% | |
| GCAACAATTGGCGCCCACCG+TGG | - | chr6_1:98352546-98352565 | Msa0901600:intron | 65.0% | |
| !! | CCGAGATGGTGGACAAGGCC+AGG | - | chr6_1:98352751-98352770 | Msa0901600:intron | 65.0% |
| GAGGTGCGTCTTGGGGATGC+GGG | - | chr6_1:98352999-98353018 | Msa0901600:intron | 65.0% | |
| TGGGGATGCGGGTGCTCTGA+TGG | - | chr6_1:98353010-98353029 | Msa0901600:intron | 65.0% | |
| CAGACGACCACCGCTCCACT+AGG | + | chr6_1:98353087-98353106 | None:intergenic | 65.0% | |
| CTAGTGGAGCGGTGGTCGTC+TGG | - | chr6_1:98353085-98353104 | Msa0901600:intron | 65.0% | |
| ACATCAGCCTGGAGAGGCGG+TGG | - | chr6_1:98353126-98353145 | Msa0901600:intron | 65.0% | |
| CCTCCCATCCCTTCAGCCCT+CGG | + | chr6_1:98353561-98353580 | None:intergenic | 65.0% | |
| GCTGCTCTCTCCCCCAGACT+AGG | - | chr6_1:98352341-98352360 | Msa0901600:intron | 65.0% | |
| CCGAGGGCTGAAGGGATGGG+AGG | - | chr6_1:98353558-98353577 | Msa0901600:intron | 70.0% | |
| CCGAGGGCTGAAGGGATGGG+AGG | - | chr6_1:98353558-98353577 | Msa0901600:intron | 70.0% | |
| TGGCGCCCACCGTGGGGCAA+AGG | - | chr6_1:98352554-98352573 | Msa0901600:intron | 75.0% | |
| TGGCGCCCACCGTGGGGCAA+AGG | - | chr6_1:98352554-98352573 | Msa0901600:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 98351525 | 98356808 | 98351525 | ID=Msa0901600;Name=Msa0901600 |
| chr6_1 | mRNA | 98351525 | 98356808 | 98351525 | ID=Msa0901600-mRNA-1;Parent=Msa0901600;Name=Msa0901600-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0|0|1|0|0|2|0|107 |
| chr6_1 | exon | 98356564 | 98356808 | 98356564 | ID=Msa0901600-mRNA-1:exon:17348;Parent=Msa0901600-mRNA-1 |
| chr6_1 | exon | 98351525 | 98351603 | 98351525 | ID=Msa0901600-mRNA-1:exon:17347;Parent=Msa0901600-mRNA-1 |
| chr6_1 | CDS | 98356564 | 98356808 | 98356564 | ID=Msa0901600-mRNA-1:cds;Parent=Msa0901600-mRNA-1 |
| chr6_1 | CDS | 98351525 | 98351603 | 98351525 | ID=Msa0901600-mRNA-1:cds;Parent=Msa0901600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
