Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901760 | RHN51853.1 | 30.859 | 256 | 156 | 5 | 13 | 250 | 201 | 453 | 1.22e-20 | 105 |
| Msa0901760 | RHN51853.1 | 31.609 | 174 | 70 | 2 | 9 | 182 | 9 | 133 | 4.93e-16 | 92.0 |
| Msa0901760 | RHN51853.1 | 46.383 | 235 | 125 | 1 | 182 | 416 | 255 | 488 | 9.97e-69 | 236 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901760 | A0A396HGY8 | 30.859 | 256 | 156 | 5 | 13 | 250 | 201 | 453 | 5.82e-21 | 105 |
| Msa0901760 | A0A396HGY8 | 31.609 | 174 | 70 | 2 | 9 | 182 | 9 | 133 | 2.36e-16 | 92.0 |
| Msa0901760 | A0A396HGY8 | 46.383 | 235 | 125 | 1 | 182 | 416 | 255 | 488 | 4.76e-69 | 236 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0901760 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901760 | MtrunA17_Chr6g0473661 | 46.383 | 235 | 125 | 1 | 182 | 416 | 255 | 488 | 9.17e-73 | 236 |
| Msa0901760 | MtrunA17_Chr6g0473661 | 30.859 | 256 | 156 | 5 | 13 | 250 | 201 | 453 | 1.12e-24 | 105 |
| Msa0901760 | MtrunA17_Chr6g0473661 | 31.609 | 174 | 70 | 2 | 9 | 182 | 9 | 133 | 4.54e-20 | 92.0 |
| Msa0901760 | MtrunA17_Chr6g0473651 | 51.908 | 131 | 62 | 1 | 182 | 312 | 224 | 353 | 1.31e-36 | 137 |
| Msa0901760 | MtrunA17_Chr6g0473651 | 31.214 | 173 | 108 | 3 | 241 | 405 | 23 | 192 | 1.66e-23 | 101 |
| Msa0901760 | MtrunA17_Chr6g0473651 | 43.307 | 127 | 72 | 0 | 56 | 182 | 226 | 352 | 1.85e-23 | 101 |
| Msa0901760 | MtrunA17_Chr6g0473651 | 46.479 | 71 | 38 | 0 | 112 | 182 | 22 | 92 | 1.40e-12 | 68.9 |
| Msa0901760 | MtrunA17_Chr1g0156191 | 37.500 | 136 | 84 | 1 | 256 | 391 | 1 | 135 | 9.07e-28 | 107 |
| Msa0901760 | MtrunA17_Chr6g0473921 | 35.433 | 127 | 82 | 0 | 290 | 416 | 1 | 127 | 1.54e-26 | 103 |
| Msa0901760 | MtrunA17_Chr1g0206471 | 28.049 | 246 | 156 | 6 | 138 | 372 | 16 | 251 | 2.21e-25 | 104 |
| Msa0901760 | MtrunA17_Chr1g0206471 | 28.729 | 181 | 115 | 2 | 43 | 211 | 40 | 218 | 8.02e-18 | 83.2 |
| Msa0901760 | MtrunA17_Chr7g0270401 | 26.744 | 258 | 158 | 7 | 147 | 391 | 30 | 269 | 4.25e-22 | 95.1 |
| Msa0901760 | MtrunA17_Chr7g0270401 | 27.044 | 159 | 104 | 1 | 43 | 189 | 39 | 197 | 1.54e-16 | 79.3 |
| Msa0901760 | MtrunA17_Chr6g0462511 | 35.398 | 113 | 72 | 1 | 281 | 392 | 2 | 114 | 1.35e-20 | 86.7 |
| Msa0901760 | MtrunA17_Chr1g0193281 | 31.298 | 131 | 90 | 0 | 43 | 173 | 39 | 169 | 6.74e-16 | 75.9 |
| Msa0901760 | MtrunA17_Chr1g0207921 | 40.000 | 80 | 46 | 1 | 43 | 120 | 36 | 115 | 7.27e-13 | 67.0 |
| Msa0901760 | MtrunA17_Chr4g0054601 | 41.892 | 74 | 43 | 0 | 196 | 269 | 1 | 74 | 2.88e-12 | 63.2 |
| Msa0901760 | MtrunA17_Chr7g0228461 | 31.667 | 120 | 78 | 2 | 58 | 176 | 2 | 118 | 2.79e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 104 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTCTGTGGCAAGGATTTC+TGG | 0.139608 | 6_1:+98623428 | None:intergenic |
| AAACTGGACCGTCGTGATTT+TGG | 0.142859 | 6_1:-98625128 | Msa0901760:CDS |
| CAATCCAGCCTTGTTTCTTA+TGG | 0.243933 | 6_1:+98623711 | None:intergenic |
| CGGTCCAGTTTGGATATTAT+TGG | 0.264347 | 6_1:+98625140 | None:intergenic |
| ATCCATGGGTGCAGTGTATT+GGG | 0.290852 | 6_1:+98623203 | None:intergenic |
| CTCATCATTGCCATCTCACT+TGG | 0.320277 | 6_1:+98625574 | None:intergenic |
| CCGAGGTTCATTACTTCATC+AGG | 0.337428 | 6_1:-98623649 | Msa0901760:CDS |
| GATATATCGGATAATGGATA+TGG | 0.364913 | 6_1:+98623682 | None:intergenic |
| CCTACCACACTTACGATTGT+TGG | 0.366401 | 6_1:-98623406 | Msa0901760:CDS |
| ACCTCTGCGATGTGCAAATC+AGG | 0.368835 | 6_1:+98623299 | None:intergenic |
| ATCGTCAAGGTCATAAGATT+TGG | 0.374229 | 6_1:+98625209 | None:intergenic |
| ACATCGCAGAGGTTGGTTGC+AGG | 0.375369 | 6_1:-98623289 | Msa0901760:CDS |
| ACAACAATGATATTGTTGTT+TGG | 0.386359 | 6_1:+98623862 | None:intergenic |
| ACCTCAATCTCATTGTTCAT+TGG | 0.386489 | 6_1:+98625341 | None:intergenic |
| GATATTTATAACATTGTAGA+TGG | 0.391221 | 6_1:-98623781 | Msa0901760:CDS |
| GACTTCGTCTGATGTCCTCT+CGG | 0.399084 | 6_1:-98623581 | Msa0901760:CDS |
| TATCCATGGGTGCAGTGTAT+TGG | 0.399336 | 6_1:+98623202 | None:intergenic |
| ACTTCAGACAAGGCTGGTCT+AGG | 0.399428 | 6_1:-98623810 | Msa0901760:CDS |
| GCAAGGGATATATCGGATAA+TGG | 0.403725 | 6_1:+98623676 | None:intergenic |
| AAAATCACGACGGTCCAGTT+TGG | 0.405460 | 6_1:+98625130 | None:intergenic |
| ATGCTATGATTGGTGGTGAT+TGG | 0.409098 | 6_1:-98623324 | Msa0901760:CDS |
| TACTCCAATAATATCCAAAC+TGG | 0.412151 | 6_1:-98625144 | Msa0901760:CDS |
| GGATGTTAACTCAGGATGTT+TGG | 0.412783 | 6_1:-98625054 | Msa0901760:intron |
| CATAAGAAACAAGGCTGGAT+TGG | 0.419848 | 6_1:-98623710 | Msa0901760:CDS |
| AACCAGACTTTGCCGTGGTA+TGG | 0.440028 | 6_1:-98623457 | Msa0901760:intron |
| CACTATTGAATTGACTTACT+CGG | 0.440432 | 6_1:-98625075 | Msa0901760:CDS |
| AAACCTATGGTCAGCGGCAG+TGG | 0.455398 | 6_1:-98623172 | Msa0901760:CDS |
| CGGCAACGCAAGGGATATAT+CGG | 0.461190 | 6_1:+98623669 | None:intergenic |
| CAGACATAGTGTCAAATTCA+AGG | 0.463743 | 6_1:+98625542 | None:intergenic |
| GACAAAGATAACACAGTCCT+TGG | 0.465488 | 6_1:-98623238 | Msa0901760:CDS |
| TCATCATTGCCATCTCACTT+GGG | 0.476104 | 6_1:+98625575 | None:intergenic |
| TAGGTTTCACATAGTATCCA+TGG | 0.490660 | 6_1:+98623188 | None:intergenic |
| ATGGTCATGAGTAGTAGATT+AGG | 0.500878 | 6_1:+98623730 | None:intergenic |
| TGGGTCTATCTGAAATATGC+GGG | 0.502250 | 6_1:-98623754 | Msa0901760:CDS |
| TTGGTCCGAACGGCTGTACA+TGG | 0.502745 | 6_1:-98623387 | Msa0901760:CDS |
| CATCTCACCATGTCTGACTT+AGG | 0.502842 | 6_1:-98626452 | None:intergenic |
| GACTTCTACAACATTGAGCT+TGG | 0.507615 | 6_1:-98625260 | Msa0901760:CDS |
| TCACCACCAATCATAGCATA+AGG | 0.511917 | 6_1:+98623328 | None:intergenic |
| ACTTCGTCTGATGTCCTCTC+GGG | 0.511997 | 6_1:-98623580 | Msa0901760:CDS |
| CATCTCCATGTACAGCCGTT+CGG | 0.512529 | 6_1:+98623382 | None:intergenic |
| AATATGCCTTATGCTATGAT+TGG | 0.515256 | 6_1:-98623334 | Msa0901760:CDS |
| TCCAATGAACAATGAGATTG+AGG | 0.518221 | 6_1:-98625342 | Msa0901760:CDS |
| AGCTTTATATGAGGAAAGGT+TGG | 0.518511 | 6_1:-98625295 | Msa0901760:CDS |
| CGACCACTGCCGCTGACCAT+AGG | 0.527761 | 6_1:+98623169 | None:intergenic |
| ACCCCAATACACTGCACCCA+TGG | 0.533195 | 6_1:-98623205 | Msa0901760:CDS |
| TGCACAAGGAATGCTGTCAT+TGG | 0.536531 | 6_1:-98626396 | Msa0901760:CDS |
| CAGTGGTCGATATGTGTACC+AGG | 0.539166 | 6_1:-98623155 | None:intergenic |
| ATTATTGGAGTAGTGTGAGC+AGG | 0.541688 | 6_1:+98625155 | None:intergenic |
| TAATGAACCTCGGCAACGCA+AGG | 0.541750 | 6_1:+98623659 | None:intergenic |
| TGATGTCCTCTCGGGCACTT+TGG | 0.543138 | 6_1:-98623572 | Msa0901760:intron |
| ATAACATTGTAGATGGTGCA+TGG | 0.547247 | 6_1:-98623774 | Msa0901760:CDS |
| CGAGGTTCATTACTTCATCA+GGG | 0.547766 | 6_1:-98623648 | Msa0901760:CDS |
| TCACCATGTCTGACTTAGGT+GGG | 0.551890 | 6_1:-98626448 | None:intergenic |
| CATATTATTTGCAACAGCGA+AGG | 0.553325 | 6_1:+98623351 | None:intergenic |
| CTTCAGACAAGGCTGGTCTA+GGG | 0.553757 | 6_1:-98623809 | Msa0901760:CDS |
| CAAGGAATGCTGTCATTGGC+AGG | 0.555729 | 6_1:-98626392 | Msa0901760:intron |
| CTTACGATTGTTGGTCCGAA+CGG | 0.558198 | 6_1:-98623397 | Msa0901760:CDS |
| TATATGAGGAAAGGTTGGTA+TGG | 0.559929 | 6_1:-98625290 | Msa0901760:CDS |
| GATTTGCACATCGCAGAGGT+TGG | 0.560790 | 6_1:-98623296 | Msa0901760:CDS |
| GGACTGTGTTATCTTTGTCA+TGG | 0.561082 | 6_1:+98623242 | None:intergenic |
| TGGATACTATGTGAAACCTA+TGG | 0.563204 | 6_1:-98623185 | Msa0901760:CDS |
| TGCAGTGTATTGGGGTATGT+CGG | 0.565836 | 6_1:+98623212 | None:intergenic |
| ATATATCCCTTGCGTTGCCG+AGG | 0.568869 | 6_1:-98623666 | Msa0901760:CDS |
| TGTGGTAGGTTTCTGTGGCA+AGG | 0.569531 | 6_1:+98623420 | None:intergenic |
| GACAAGCTTTATATGAGGAA+AGG | 0.570103 | 6_1:-98625299 | Msa0901760:CDS |
| ATCTCACTTGGGGTATACGT+TGG | 0.570410 | 6_1:+98625586 | None:intergenic |
| TAACATTGTAGATGGTGCAT+GGG | 0.570614 | 6_1:-98623773 | Msa0901760:CDS |
| CTCACCATGTCTGACTTAGG+TGG | 0.572352 | 6_1:-98626449 | None:intergenic |
| ACTTACTCGGATGTTAACTC+AGG | 0.572912 | 6_1:-98625062 | Msa0901760:CDS |
| GAAAGGTTGGTATGGACTGA+AGG | 0.575278 | 6_1:-98625282 | Msa0901760:CDS |
| GAGGCGACAAGCTTTATATG+AGG | 0.576586 | 6_1:-98625304 | Msa0901760:CDS |
| ACAAGGCTGGTCTAGGGTGA+AGG | 0.576887 | 6_1:-98623803 | Msa0901760:CDS |
| CATCATTGCCATCTCACTTG+GGG | 0.579124 | 6_1:+98625576 | None:intergenic |
| AACGTATACCCCAAGTGAGA+TGG | 0.579805 | 6_1:-98625584 | Msa0901760:CDS |
| AAATCTGTTGTTGATCGTCA+AGG | 0.579813 | 6_1:+98625196 | None:intergenic |
| ACAACATTGAGCTTGGTGCA+TGG | 0.580204 | 6_1:-98625253 | Msa0901760:CDS |
| CCAACAATCGTAAGTGTGGT+AGG | 0.580385 | 6_1:+98623406 | None:intergenic |
| AGGTCTACTTCAGACAAGGC+TGG | 0.585540 | 6_1:-98623816 | Msa0901760:CDS |
| ATGACCATAAGAAACAAGGC+TGG | 0.597597 | 6_1:-98623715 | Msa0901760:CDS |
| ATGCCTTATGCTATGATTGG+TGG | 0.601798 | 6_1:-98623331 | Msa0901760:CDS |
| TTGGGGTATGTCGGAAACCA+AGG | 0.606539 | 6_1:+98623221 | None:intergenic |
| AATGAACCTCGGCAACGCAA+GGG | 0.607154 | 6_1:+98623660 | None:intergenic |
| AACGCTTTGGATGCTGCACA+AGG | 0.608033 | 6_1:-98626410 | Msa0901760:CDS |
| GTAAGTGTGGTAGGTTTCTG+TGG | 0.617237 | 6_1:+98623415 | None:intergenic |
| AGGTTTCACATAGTATCCAT+GGG | 0.622147 | 6_1:+98623189 | None:intergenic |
| CAACAGCGAACTTAACTGCA+TGG | 0.624703 | 6_1:+98623266 | None:intergenic |
| TCCATGGGTGCAGTGTATTG+GGG | 0.627336 | 6_1:+98623204 | None:intergenic |
| ACCTGATTTGCACATCGCAG+AGG | 0.634639 | 6_1:-98623300 | Msa0901760:CDS |
| ATGGGTCTATCTGAAATATG+CGG | 0.636801 | 6_1:-98623755 | Msa0901760:CDS |
| TTCTGGCAGAAGCCATACCA+CGG | 0.648051 | 6_1:+98623445 | None:intergenic |
| GGCAAGGTCTACTTCAGACA+AGG | 0.649008 | 6_1:-98623820 | Msa0901760:CDS |
| CCTGATGAAGTAATGAACCT+CGG | 0.649312 | 6_1:+98623649 | None:intergenic |
| TTATTTAGCAGTTAAAGGCG+AGG | 0.655685 | 6_1:-98623948 | Msa0901760:intron |
| GAGGTTCATTACTTCATCAG+GGG | 0.659487 | 6_1:-98623647 | Msa0901760:CDS |
| CAAGTGAGATGGCAATGATG+AGG | 0.660753 | 6_1:-98625573 | Msa0901760:CDS |
| ACTCATGACCATAAGAAACA+AGG | 0.663177 | 6_1:-98623719 | Msa0901760:CDS |
| TCAAAATCTTGACAGATGTG+CGG | 0.663839 | 6_1:+98623602 | None:intergenic |
| CGGACCAACAATCGTAAGTG+TGG | 0.667344 | 6_1:+98623402 | None:intergenic |
| GGGTCTATCTGAAATATGCG+GGG | 0.673953 | 6_1:-98623753 | Msa0901760:CDS |
| TATATACCAAAGTGCCCGAG+AGG | 0.678235 | 6_1:+98623566 | None:intergenic |
| TGTTTAACCAGACTTTGCCG+TGG | 0.679547 | 6_1:-98623462 | Msa0901760:intron |
| AAACCCACCTAAGTCAGACA+TGG | 0.685362 | 6_1:+98626445 | None:intergenic |
| TATGTGAAACCTATGGTCAG+CGG | 0.713139 | 6_1:-98623178 | Msa0901760:CDS |
| GAGGTTCGACTGTATCGCAG+AGG | 0.730544 | 6_1:-98625323 | Msa0901760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGCATAATATAAAATATAAA+TGG | - | chr6_1:98623762-98623781 | Msa0901760:CDS | 10.0% |
| !!! | TTATTTTGATTTTTAATGCA+TGG | - | chr6_1:98623439-98623458 | Msa0901760:CDS | 15.0% |
| !! | AAAAGATTGAAAAAAACATT+TGG | + | chr6_1:98623831-98623850 | None:intergenic | 15.0% |
| !! | AAAAAACCATATAAATTCAT+TGG | + | chr6_1:98625084-98625103 | None:intergenic | 15.0% |
| !! | TACATTCTAATTTGAATATA+TGG | - | chr6_1:98625324-98625343 | Msa0901760:CDS | 15.0% |
| !!! | TATGTTAACATTTTCTATTA+TGG | - | chr6_1:98625599-98625618 | Msa0901760:CDS | 15.0% |
| !! | GGTTAATATAATTAGATATT+TGG | - | chr6_1:98626069-98626088 | Msa0901760:intron | 15.0% |
| !! | TTATGAGGAAAAAAAATCTA+TGG | - | chr6_1:98623288-98623307 | Msa0901760:CDS | 20.0% |
| !! | GTATCTTAAGAATACAAAAT+TGG | + | chr6_1:98623543-98623562 | None:intergenic | 20.0% |
| !! | TACATGTTTACTCTTTATTA+TGG | - | chr6_1:98623560-98623579 | Msa0901760:intron | 20.0% |
| !!! | TTTAGGACAAAAAATATCTA+GGG | - | chr6_1:98623586-98623605 | Msa0901760:CDS | 20.0% |
| !! | AGAAATAAACAATAACACAA+CGG | + | chr6_1:98624597-98624616 | None:intergenic | 20.0% |
| !!! | AACTAACGTACAAATTTTTT+CGG | + | chr6_1:98625489-98625508 | None:intergenic | 20.0% |
| !! | ATGTTAACATAAATTTATGC+CGG | + | chr6_1:98625590-98625609 | None:intergenic | 20.0% |
| !! | GATATTTATAACATTGTAGA+TGG | - | chr6_1:98625818-98625837 | Msa0901760:intron | 20.0% |
| ! | AACATATTGTTAACATGCTA+AGG | + | chr6_1:98623380-98623399 | None:intergenic | 25.0% |
| ! | AAATAATGATATGCAACACA+GGG | + | chr6_1:98623425-98623444 | None:intergenic | 25.0% |
| ! | AAAATAATGATATGCAACAC+AGG | + | chr6_1:98623426-98623445 | None:intergenic | 25.0% |
| !!! | CTAGATATTTTTTGTCCTAA+AGG | + | chr6_1:98623587-98623606 | None:intergenic | 25.0% |
| !!! | CTTTAGGACAAAAAATATCT+AGG | - | chr6_1:98623585-98623604 | Msa0901760:CDS | 25.0% |
| !!! | AACTTGTTATAAACATGCAA+AGG | + | chr6_1:98623799-98623818 | None:intergenic | 25.0% |
| ! | TTAGCATCAAACACATTTAT+TGG | + | chr6_1:98624142-98624161 | None:intergenic | 25.0% |
| ! | TTTCTGTTTGTGTTTAGTAA+CGG | - | chr6_1:98624626-98624645 | Msa0901760:intron | 25.0% |
| !! | TATATGTTGTTTATTCTGTC+CGG | - | chr6_1:98625038-98625057 | Msa0901760:intron | 25.0% |
| !! | AAATTTTCACGACAACAATA+AGG | - | chr6_1:98625297-98625316 | Msa0901760:CDS | 25.0% |
| ! | GTTTCCTATCTAATATCATA+AGG | - | chr6_1:98625621-98625640 | Msa0901760:intron | 25.0% |
| !! | ACAACAATGATATTGTTGTT+TGG | + | chr6_1:98625740-98625759 | None:intergenic | 25.0% |
| !! | GGTATATAATTTGCACTAAT+TGG | - | chr6_1:98626048-98626067 | Msa0901760:intron | 25.0% |
| ! | ATTTCGTTCATTCGATTATA+AGG | - | chr6_1:98626094-98626113 | Msa0901760:intron | 25.0% |
| ACTCTTTATTATGGTCCTTT+AGG | - | chr6_1:98623569-98623588 | Msa0901760:intron | 30.0% | |
| ATCAAACATAACGATATCAG+AGG | + | chr6_1:98623736-98623755 | None:intergenic | 30.0% | |
| ! | CAATATTAGGAGGCATAAAA+GGG | + | chr6_1:98623898-98623917 | None:intergenic | 30.0% |
| ! | ACAATATTAGGAGGCATAAA+AGG | + | chr6_1:98623899-98623918 | None:intergenic | 30.0% |
| TATGTCCTCATCTATTAGAA+TGG | + | chr6_1:98624112-98624131 | None:intergenic | 30.0% | |
| ! | TGTTAATTTTCGTAGGGAAT+GGG | - | chr6_1:98624168-98624187 | Msa0901760:intron | 30.0% |
| TAGTCTTTCAAAAAGCAGTT+AGG | + | chr6_1:98624201-98624220 | None:intergenic | 30.0% | |
| !!! | AACTGCTTTTTGAAAGACTA+TGG | - | chr6_1:98624201-98624220 | Msa0901760:intron | 30.0% |
| TACTCCAATAATATCCAAAC+TGG | - | chr6_1:98624455-98624474 | Msa0901760:intron | 30.0% | |
| ! | CACTATTGAATTGACTTACT+CGG | - | chr6_1:98624524-98624543 | Msa0901760:intron | 30.0% |
| ATCAAATCTGCATTTGTAGA+CGG | + | chr6_1:98624931-98624950 | None:intergenic | 30.0% | |
| ACAAATGCAGATTTGATTAG+AGG | - | chr6_1:98624934-98624953 | Msa0901760:intron | 30.0% | |
| ACAACATATACTTCAGTTCA+GGG | + | chr6_1:98625028-98625047 | None:intergenic | 30.0% | |
| AACAACATATACTTCAGTTC+AGG | + | chr6_1:98625029-98625048 | None:intergenic | 30.0% | |
| ACGAATAACAATCAAATTGC+CGG | + | chr6_1:98625060-98625079 | None:intergenic | 30.0% | |
| TTCGTGCCAATGAATTTATA+TGG | - | chr6_1:98625075-98625094 | Msa0901760:CDS | 30.0% | |
| ! | AACAAAACTTGGTGGTTAAA+AGG | + | chr6_1:98625252-98625271 | None:intergenic | 30.0% |
| TCTATTACTCTCTACAAATC+CGG | + | chr6_1:98625382-98625401 | None:intergenic | 30.0% | |
| AGTTATCATAAACTCTGTCT+AGG | - | chr6_1:98625446-98625465 | Msa0901760:intron | 30.0% | |
| !!! | ATTTGTACGTTAGTTTTGTG+CGG | - | chr6_1:98625494-98625513 | Msa0901760:intron | 30.0% |
| CAGATATACTTTCTTATGTC+CGG | - | chr6_1:98625568-98625587 | Msa0901760:CDS | 30.0% | |
| CACACCTTATGATATTAGAT+AGG | + | chr6_1:98625628-98625647 | None:intergenic | 30.0% | |
| ! | TGTCCTTATTTAGCAGTTAA+AGG | - | chr6_1:98625646-98625665 | Msa0901760:intron | 30.0% |
| ! | ACTTCTTTTGCAAAACATGA+AGG | + | chr6_1:98625680-98625699 | None:intergenic | 30.0% |
| ! | TCATGTTTTGCAAAAGAAGT+AGG | - | chr6_1:98625680-98625699 | Msa0901760:intron | 30.0% |
| GTTGAAGTTCAGAAAAAGAA+TGG | - | chr6_1:98625758-98625777 | Msa0901760:intron | 30.0% | |
| !! | GATATATCGGATAATGGATA+TGG | + | chr6_1:98625920-98625939 | None:intergenic | 30.0% |
| AAGGTTATCTTACTGTTTGT+TGG | - | chr6_1:98626113-98626132 | Msa0901760:intron | 30.0% | |
| AATATGCCTTATGCTATGAT+TGG | - | chr6_1:98626265-98626284 | Msa0901760:intron | 30.0% | |
| !!! | TTAGGTGGGTTTGTTTTAAC+TGG | - | chr6_1:98623165-98623184 | Msa0901760:CDS | 35.0% |
| !!! | TGTTTTAACTGGAAACGCTT+TGG | - | chr6_1:98623176-98623195 | Msa0901760:CDS | 35.0% |
| CATAAACAACCACAGTAAAG+AGG | + | chr6_1:98623273-98623292 | None:intergenic | 35.0% | |
| CTTTACTGTGGTTGTTTATG+AGG | - | chr6_1:98623273-98623292 | Msa0901760:CDS | 35.0% | |
| GGCATAAAAGGGAAAAAGTA+AGG | + | chr6_1:98623887-98623906 | None:intergenic | 35.0% | |
| AAGGAGCAGATCACAATATT+AGG | + | chr6_1:98623911-98623930 | None:intergenic | 35.0% | |
| AGCATGCATGAAAATGTTGT+AGG | - | chr6_1:98623971-98623990 | Msa0901760:intron | 35.0% | |
| ATGCATGAAAATGTTGTAGG+TGG | - | chr6_1:98623974-98623993 | Msa0901760:intron | 35.0% | |
| TGCATGAAAATGTTGTAGGT+GGG | - | chr6_1:98623975-98623994 | Msa0901760:intron | 35.0% | |
| CAGACATAGTGTCAAATTCA+AGG | + | chr6_1:98624060-98624079 | None:intergenic | 35.0% | |
| TCCTCATCTATTAGAATGGT+CGG | + | chr6_1:98624108-98624127 | None:intergenic | 35.0% | |
| CATCAAACACATTTATTGGC+AGG | + | chr6_1:98624138-98624157 | None:intergenic | 35.0% | |
| ! | GTGTTAATTTTCGTAGGGAA+TGG | - | chr6_1:98624167-98624186 | Msa0901760:intron | 35.0% |
| !! | TGCTTTTTGAAAGACTATGG+TGG | - | chr6_1:98624204-98624223 | Msa0901760:intron | 35.0% |
| TCCAATGAACAATGAGATTG+AGG | - | chr6_1:98624257-98624276 | Msa0901760:intron | 35.0% | |
| ACCTCAATCTCATTGTTCAT+TGG | + | chr6_1:98624261-98624280 | None:intergenic | 35.0% | |
| ! | GACAAGCTTTATATGAGGAA+AGG | - | chr6_1:98624300-98624319 | Msa0901760:intron | 35.0% |
| ! | AGCTTTATATGAGGAAAGGT+TGG | - | chr6_1:98624304-98624323 | Msa0901760:intron | 35.0% |
| !! | TATATGAGGAAAGGTTGGTA+TGG | - | chr6_1:98624309-98624328 | Msa0901760:intron | 35.0% |
| ATCGTCAAGGTCATAAGATT+TGG | + | chr6_1:98624393-98624412 | None:intergenic | 35.0% | |
| AAATCTGTTGTTGATCGTCA+AGG | + | chr6_1:98624406-98624425 | None:intergenic | 35.0% | |
| ! | GATCAACAACAGATTTTTCG+AGG | - | chr6_1:98624410-98624429 | Msa0901760:intron | 35.0% |
| ACTCCTATGTGTACAATTGA+AGG | - | chr6_1:98624793-98624812 | Msa0901760:intron | 35.0% | |
| TCACCTTCAATTGTACACAT+AGG | + | chr6_1:98624799-98624818 | None:intergenic | 35.0% | |
| TGTGTACAATTGAAGGTGAT+TGG | - | chr6_1:98624800-98624819 | Msa0901760:intron | 35.0% | |
| GTGTACAATTGAAGGTGATT+GGG | - | chr6_1:98624801-98624820 | Msa0901760:intron | 35.0% | |
| TGTACAATTGAAGGTGATTG+GGG | - | chr6_1:98624802-98624821 | Msa0901760:intron | 35.0% | |
| GCTTCTATATTCTGTTTCCA+AGG | - | chr6_1:98624988-98625007 | Msa0901760:intron | 35.0% | |
| AACGCAGCATAAACAAAACT+TGG | + | chr6_1:98625263-98625282 | None:intergenic | 35.0% | |
| ! | ATATGGTTGAAGAGTGTAAG+TGG | - | chr6_1:98625341-98625360 | Msa0901760:CDS | 35.0% |
| ! | CATGTCTGAAATAGAAACCA+TGG | - | chr6_1:98625530-98625549 | Msa0901760:intron | 35.0% |
| TCGCCTTTAACTGCTAAATA+AGG | + | chr6_1:98625652-98625671 | None:intergenic | 35.0% | |
| TTATTTAGCAGTTAAAGGCG+AGG | - | chr6_1:98625651-98625670 | Msa0901760:intron | 35.0% | |
| AGTTCAGAAAAAGAATGGCA+AGG | - | chr6_1:98625763-98625782 | Msa0901760:intron | 35.0% | |
| ATAACATTGTAGATGGTGCA+TGG | - | chr6_1:98625825-98625844 | Msa0901760:intron | 35.0% | |
| TAACATTGTAGATGGTGCAT+GGG | - | chr6_1:98625826-98625845 | Msa0901760:intron | 35.0% | |
| ! | ATGGGTCTATCTGAAATATG+CGG | - | chr6_1:98625844-98625863 | Msa0901760:intron | 35.0% |
| ATGGTCATGAGTAGTAGATT+AGG | + | chr6_1:98625872-98625891 | None:intergenic | 35.0% | |
| ACTCATGACCATAAGAAACA+AGG | - | chr6_1:98625880-98625899 | Msa0901760:intron | 35.0% | |
| TCAAAATCTTGACAGATGTG+CGG | + | chr6_1:98626000-98626019 | None:intergenic | 35.0% | |
| CATATTATTTGCAACAGCGA+AGG | + | chr6_1:98626251-98626270 | None:intergenic | 35.0% | |
| AGGTTTCACATAGTATCCAT+GGG | + | chr6_1:98626413-98626432 | None:intergenic | 35.0% | |
| TAGGTTTCACATAGTATCCA+TGG | + | chr6_1:98626414-98626433 | None:intergenic | 35.0% | |
| TGGATACTATGTGAAACCTA+TGG | - | chr6_1:98626414-98626433 | Msa0901760:CDS | 35.0% | |
| TGCATGTTACCTCTTTACTG+TGG | - | chr6_1:98623261-98623280 | Msa0901760:CDS | 40.0% | |
| GACATGCAAAGCTATGTTCT+AGG | + | chr6_1:98623474-98623493 | None:intergenic | 40.0% | |
| !! | CCTATACTGGTAACTTGCTA+AGG | + | chr6_1:98623686-98623705 | None:intergenic | 40.0% |
| CCTTAGCAAGTTACCAGTAT+AGG | - | chr6_1:98623683-98623702 | Msa0901760:CDS | 40.0% | |
| ACATAACGATATCAGAGGCA+TGG | + | chr6_1:98623731-98623750 | None:intergenic | 40.0% | |
| AGGCTTCTTGTTACTCTGAT+GGG | + | chr6_1:98623867-98623886 | None:intergenic | 40.0% | |
| AAGGCTTCTTGTTACTCTGA+TGG | + | chr6_1:98623868-98623887 | None:intergenic | 40.0% | |
| GAGCAGATCACAATATTAGG+AGG | + | chr6_1:98623908-98623927 | None:intergenic | 40.0% | |
| GCATGAAAATGTTGTAGGTG+GGG | - | chr6_1:98623976-98623995 | Msa0901760:intron | 40.0% | |
| CATGAAAATGTTGTAGGTGG+GGG | - | chr6_1:98623977-98623996 | Msa0901760:intron | 40.0% | |
| TCATCATTGCCATCTCACTT+GGG | + | chr6_1:98624027-98624046 | None:intergenic | 40.0% | |
| TCCGACCATTCTAATAGATG+AGG | - | chr6_1:98624104-98624123 | Msa0901760:intron | 40.0% | |
| ! | ATGCGCGTGTTAATTTTCGT+AGG | - | chr6_1:98624161-98624180 | Msa0901760:intron | 40.0% |
| ! | TGCGCGTGTTAATTTTCGTA+GGG | - | chr6_1:98624162-98624181 | Msa0901760:intron | 40.0% |
| ! | AATTTTCGTAGGGAATGGGT+CGG | - | chr6_1:98624172-98624191 | Msa0901760:intron | 40.0% |
| GACTTCTACAACATTGAGCT+TGG | - | chr6_1:98624339-98624358 | Msa0901760:intron | 40.0% | |
| ATTATTGGAGTAGTGTGAGC+AGG | + | chr6_1:98624447-98624466 | None:intergenic | 40.0% | |
| CGGTCCAGTTTGGATATTAT+TGG | + | chr6_1:98624462-98624481 | None:intergenic | 40.0% | |
| ACTTACTCGGATGTTAACTC+AGG | - | chr6_1:98624537-98624556 | Msa0901760:intron | 40.0% | |
| GGATGTTAACTCAGGATGTT+TGG | - | chr6_1:98624545-98624564 | Msa0901760:intron | 40.0% | |
| AGGATGTTTGGTATTCACTG+TGG | - | chr6_1:98624557-98624576 | Msa0901760:intron | 40.0% | |
| ATTAGACATTGCCGTGGTTT+GGG | - | chr6_1:98624668-98624687 | Msa0901760:intron | 40.0% | |
| CGTGTTACCTCCGATAAATA+CGG | - | chr6_1:98624702-98624721 | Msa0901760:intron | 40.0% | |
| ACAGTGAGGTCCGTATTTAT+CGG | + | chr6_1:98624715-98624734 | None:intergenic | 40.0% | |
| CAACGTAATCAATGACAGTG+AGG | + | chr6_1:98624729-98624748 | None:intergenic | 40.0% | |
| ! | CTCACTGTCATTGATTACGT+TGG | - | chr6_1:98624727-98624746 | Msa0901760:intron | 40.0% |
| TTGATTACGTTGGATTTGCC+TGG | - | chr6_1:98624737-98624756 | Msa0901760:intron | 40.0% | |
| TGTCACGCTGAATGAACTTT+AGG | + | chr6_1:98624771-98624790 | None:intergenic | 40.0% | |
| GTACAATTGAAGGTGATTGG+GGG | - | chr6_1:98624803-98624822 | Msa0901760:intron | 40.0% | |
| TGATTGGGGGACAATATGTA+AGG | - | chr6_1:98624816-98624835 | Msa0901760:intron | 40.0% | |
| !! | TGATTAGAGGCATTGATCCA+AGG | - | chr6_1:98624947-98624966 | Msa0901760:intron | 40.0% |
| TCAGACTGCAATATGAACCT+TGG | + | chr6_1:98624967-98624986 | None:intergenic | 40.0% | |
| GGGTACAAAATGCATAACCT+TGG | + | chr6_1:98625008-98625027 | None:intergenic | 40.0% | |
| GCAGCATAAACAAAACTTGG+TGG | + | chr6_1:98625260-98625279 | None:intergenic | 40.0% | |
| GTGGATAAAATGATGCAGAC+CGG | - | chr6_1:98625360-98625379 | Msa0901760:CDS | 40.0% | |
| TGACAGATAAAGTTCAGCCA+TGG | + | chr6_1:98625550-98625569 | None:intergenic | 40.0% | |
| ! | TGGGTCTATCTGAAATATGC+GGG | - | chr6_1:98625845-98625864 | Msa0901760:intron | 40.0% |
| ATGACCATAAGAAACAAGGC+TGG | - | chr6_1:98625884-98625903 | Msa0901760:intron | 40.0% | |
| !! | CAATCCAGCCTTGTTTCTTA+TGG | + | chr6_1:98625891-98625910 | None:intergenic | 40.0% |
| CATAAGAAACAAGGCTGGAT+TGG | - | chr6_1:98625889-98625908 | Msa0901760:intron | 40.0% | |
| GCAAGGGATATATCGGATAA+TGG | + | chr6_1:98625926-98625945 | None:intergenic | 40.0% | |
| CCTGATGAAGTAATGAACCT+CGG | + | chr6_1:98625953-98625972 | None:intergenic | 40.0% | |
| CGAGGTTCATTACTTCATCA+GGG | - | chr6_1:98625951-98625970 | Msa0901760:intron | 40.0% | |
| GAGGTTCATTACTTCATCAG+GGG | - | chr6_1:98625952-98625971 | Msa0901760:intron | 40.0% | |
| TGCGGAAAAAATGCACTAAC+TGG | + | chr6_1:98625982-98626001 | None:intergenic | 40.0% | |
| ATGCCTTATGCTATGATTGG+TGG | - | chr6_1:98626268-98626287 | Msa0901760:intron | 40.0% | |
| TCACCACCAATCATAGCATA+AGG | + | chr6_1:98626274-98626293 | None:intergenic | 40.0% | |
| !! | ATGCTATGATTGGTGGTGAT+TGG | - | chr6_1:98626275-98626294 | Msa0901760:intron | 40.0% |
| GGACTGTGTTATCTTTGTCA+TGG | + | chr6_1:98626360-98626379 | None:intergenic | 40.0% | |
| GACAAAGATAACACAGTCCT+TGG | - | chr6_1:98626361-98626380 | Msa0901760:intron | 40.0% | |
| TATGTGAAACCTATGGTCAG+CGG | - | chr6_1:98626421-98626440 | Msa0901760:CDS | 40.0% | |
| TGCACAAGGAATGCTGTCAT+TGG | - | chr6_1:98623203-98623222 | Msa0901760:CDS | 45.0% | |
| CGCTGTCATAGAACCTATAC+TGG | + | chr6_1:98623699-98623718 | None:intergenic | 45.0% | |
| !! | TCTTGTTACTCTGATGGGCT+GGG | + | chr6_1:98623862-98623881 | None:intergenic | 45.0% |
| ! | TTCTTGTTACTCTGATGGGC+TGG | + | chr6_1:98623863-98623882 | None:intergenic | 45.0% |
| TGCATGCTGCAAATCAGCTT+TGG | + | chr6_1:98623959-98623978 | None:intergenic | 45.0% | |
| ATCTCACTTGGGGTATACGT+TGG | + | chr6_1:98624016-98624035 | None:intergenic | 45.0% | |
| AACGTATACCCCAAGTGAGA+TGG | - | chr6_1:98624015-98624034 | Msa0901760:intron | 45.0% | |
| CATCATTGCCATCTCACTTG+GGG | + | chr6_1:98624026-98624045 | None:intergenic | 45.0% | |
| CTCATCATTGCCATCTCACT+TGG | + | chr6_1:98624028-98624047 | None:intergenic | 45.0% | |
| CAAGTGAGATGGCAATGATG+AGG | - | chr6_1:98624026-98624045 | Msa0901760:intron | 45.0% | |
| ! | GAGGCGACAAGCTTTATATG+AGG | - | chr6_1:98624295-98624314 | Msa0901760:intron | 45.0% |
| !! | GAAAGGTTGGTATGGACTGA+AGG | - | chr6_1:98624317-98624336 | Msa0901760:intron | 45.0% |
| !! | ACAACATTGAGCTTGGTGCA+TGG | - | chr6_1:98624346-98624365 | Msa0901760:intron | 45.0% |
| AAAATCACGACGGTCCAGTT+TGG | + | chr6_1:98624472-98624491 | None:intergenic | 45.0% | |
| ! | AAACTGGACCGTCGTGATTT+TGG | - | chr6_1:98624471-98624490 | Msa0901760:intron | 45.0% |
| ! | AACTGGACCGTCGTGATTTT+GGG | - | chr6_1:98624472-98624491 | Msa0901760:intron | 45.0% |
| AATTCCCCCCAAAATCACGA+CGG | + | chr6_1:98624482-98624501 | None:intergenic | 45.0% | |
| !! | TCGTGATTTTGGGGGGAATT+TGG | - | chr6_1:98624482-98624501 | Msa0901760:intron | 45.0% |
| ATCTGCATTAGACATTGCCG+TGG | - | chr6_1:98624662-98624681 | Msa0901760:intron | 45.0% | |
| CATTAGACATTGCCGTGGTT+TGG | - | chr6_1:98624667-98624686 | Msa0901760:intron | 45.0% | |
| GAACTTTAGGTCACATCTCC+AGG | + | chr6_1:98624758-98624777 | None:intergenic | 45.0% | |
| AACGACCTTCGACAAACCTA+CGG | + | chr6_1:98624843-98624862 | None:intergenic | 45.0% | |
| !!! | TGTACGTTAGTTTTGTGCGG+TGG | - | chr6_1:98625497-98625516 | Msa0901760:intron | 45.0% |
| ! | GGGTCTATCTGAAATATGCG+GGG | - | chr6_1:98625846-98625865 | Msa0901760:intron | 45.0% |
| CCGAGGTTCATTACTTCATC+AGG | - | chr6_1:98625950-98625969 | Msa0901760:intron | 45.0% | |
| ! | TATATACCAAAGTGCCCGAG+AGG | + | chr6_1:98626036-98626055 | None:intergenic | 45.0% |
| TGTTTAACCAGACTTTGCCG+TGG | - | chr6_1:98626137-98626156 | Msa0901760:intron | 45.0% | |
| GTTTCTGTGGCAAGGATTTC+TGG | + | chr6_1:98626174-98626193 | None:intergenic | 45.0% | |
| GTAAGTGTGGTAGGTTTCTG+TGG | + | chr6_1:98626187-98626206 | None:intergenic | 45.0% | |
| CCAACAATCGTAAGTGTGGT+AGG | + | chr6_1:98626196-98626215 | None:intergenic | 45.0% | |
| CCTACCACACTTACGATTGT+TGG | - | chr6_1:98626193-98626212 | Msa0901760:intron | 45.0% | |
| CTTACGATTGTTGGTCCGAA+CGG | - | chr6_1:98626202-98626221 | Msa0901760:intron | 45.0% | |
| CAACAGCGAACTTAACTGCA+TGG | + | chr6_1:98626336-98626355 | None:intergenic | 45.0% | |
| TGCAGTGTATTGGGGTATGT+CGG | + | chr6_1:98626390-98626409 | None:intergenic | 45.0% | |
| ATCCATGGGTGCAGTGTATT+GGG | + | chr6_1:98626399-98626418 | None:intergenic | 45.0% | |
| TATCCATGGGTGCAGTGTAT+TGG | + | chr6_1:98626400-98626419 | None:intergenic | 45.0% | |
| ! | AACGCTTTGGATGCTGCACA+AGG | - | chr6_1:98623189-98623208 | Msa0901760:CDS | 50.0% |
| CAAGGAATGCTGTCATTGGC+AGG | - | chr6_1:98623207-98623226 | Msa0901760:CDS | 50.0% | |
| ATCTGCTCCTTGCTTGAGTG+TGG | - | chr6_1:98623920-98623939 | Msa0901760:CDS | 50.0% | |
| ! | ACTGGACCGTCGTGATTTTG+GGG | - | chr6_1:98624473-98624492 | Msa0901760:intron | 50.0% |
| CGCTTACAGAACCCAAACCA+CGG | + | chr6_1:98624682-98624701 | None:intergenic | 50.0% | |
| GTGAGGTCCGTATTTATCGG+AGG | + | chr6_1:98624712-98624731 | None:intergenic | 50.0% | |
| GGACAATATGTAAGGCCCGT+AGG | - | chr6_1:98624824-98624843 | Msa0901760:intron | 50.0% | |
| ACGACCTTCGACAAACCTAC+GGG | + | chr6_1:98624842-98624861 | None:intergenic | 50.0% | |
| AGGTCGTTCGATAGACCTTG+CGG | - | chr6_1:98624855-98624874 | Msa0901760:intron | 50.0% | |
| TTCGATAGACCTTGCGGTCA+CGG | - | chr6_1:98624861-98624880 | Msa0901760:intron | 50.0% | |
| CTGCATTTGTAGACGGCACA+GGG | + | chr6_1:98624924-98624943 | None:intergenic | 50.0% | |
| TCTGCATTTGTAGACGGCAC+AGG | + | chr6_1:98624925-98624944 | None:intergenic | 50.0% | |
| GATAAGTCCTCAACCGAGAC+AGG | + | chr6_1:98625148-98625167 | None:intergenic | 50.0% | |
| GGCAAGGTCTACTTCAGACA+AGG | - | chr6_1:98625779-98625798 | Msa0901760:intron | 50.0% | |
| AGGTCTACTTCAGACAAGGC+TGG | - | chr6_1:98625783-98625802 | Msa0901760:intron | 50.0% | |
| !! | ACTTCAGACAAGGCTGGTCT+AGG | - | chr6_1:98625789-98625808 | Msa0901760:intron | 50.0% |
| !! | CTTCAGACAAGGCTGGTCTA+GGG | - | chr6_1:98625790-98625809 | Msa0901760:intron | 50.0% |
| CGGCAACGCAAGGGATATAT+CGG | + | chr6_1:98625933-98625952 | None:intergenic | 50.0% | |
| ATATATCCCTTGCGTTGCCG+AGG | - | chr6_1:98625933-98625952 | Msa0901760:intron | 50.0% | |
| AATGAACCTCGGCAACGCAA+GGG | + | chr6_1:98625942-98625961 | None:intergenic | 50.0% | |
| TAATGAACCTCGGCAACGCA+AGG | + | chr6_1:98625943-98625962 | None:intergenic | 50.0% | |
| GACTTCGTCTGATGTCCTCT+CGG | - | chr6_1:98626018-98626037 | Msa0901760:intron | 50.0% | |
| ACTTCGTCTGATGTCCTCTC+GGG | - | chr6_1:98626019-98626038 | Msa0901760:intron | 50.0% | |
| AACCAGACTTTGCCGTGGTA+TGG | - | chr6_1:98626142-98626161 | Msa0901760:intron | 50.0% | |
| TTCTGGCAGAAGCCATACCA+CGG | + | chr6_1:98626157-98626176 | None:intergenic | 50.0% | |
| TGTGGTAGGTTTCTGTGGCA+AGG | + | chr6_1:98626182-98626201 | None:intergenic | 50.0% | |
| CGGACCAACAATCGTAAGTG+TGG | + | chr6_1:98626200-98626219 | None:intergenic | 50.0% | |
| CATCTCCATGTACAGCCGTT+CGG | + | chr6_1:98626220-98626239 | None:intergenic | 50.0% | |
| ! | ACCTGATTTGCACATCGCAG+AGG | - | chr6_1:98626299-98626318 | Msa0901760:intron | 50.0% |
| ACCTCTGCGATGTGCAAATC+AGG | + | chr6_1:98626303-98626322 | None:intergenic | 50.0% | |
| GATTTGCACATCGCAGAGGT+TGG | - | chr6_1:98626303-98626322 | Msa0901760:intron | 50.0% | |
| TTGGGGTATGTCGGAAACCA+AGG | + | chr6_1:98626381-98626400 | None:intergenic | 50.0% | |
| TCCATGGGTGCAGTGTATTG+GGG | + | chr6_1:98626398-98626417 | None:intergenic | 50.0% | |
| GGAATGCTGTCATTGGCAGG+TGG | - | chr6_1:98623210-98623229 | Msa0901760:CDS | 55.0% | |
| CCAACGACCACACTCAAGCA+AGG | + | chr6_1:98623930-98623949 | None:intergenic | 55.0% | |
| CCTTGCTTGAGTGTGGTCGT+TGG | - | chr6_1:98623927-98623946 | Msa0901760:CDS | 55.0% | |
| GAGGTTCGACTGTATCGCAG+AGG | - | chr6_1:98624276-98624295 | Msa0901760:intron | 55.0% | |
| ! | CTGGACCGTCGTGATTTTGG+GGG | - | chr6_1:98624474-98624493 | Msa0901760:intron | 55.0% |
| ! | TGGACCGTCGTGATTTTGGG+GGG | - | chr6_1:98624475-98624494 | Msa0901760:intron | 55.0% |
| AAGGCCCGTAGGTTTGTCGA+AGG | - | chr6_1:98624835-98624854 | Msa0901760:intron | 55.0% | |
| !! | ACAAGGCTGGTCTAGGGTGA+AGG | - | chr6_1:98625796-98625815 | Msa0901760:intron | 55.0% |
| TGATGTCCTCTCGGGCACTT+TGG | - | chr6_1:98626027-98626046 | Msa0901760:intron | 55.0% | |
| AGCCATACCACGGCAAAGTC+TGG | + | chr6_1:98626147-98626166 | None:intergenic | 55.0% | |
| TTGGTCCGAACGGCTGTACA+TGG | - | chr6_1:98626212-98626231 | Msa0901760:intron | 55.0% | |
| ! | ACATCGCAGAGGTTGGTTGC+AGG | - | chr6_1:98626310-98626329 | Msa0901760:intron | 55.0% |
| ACCCCAATACACTGCACCCA+TGG | - | chr6_1:98626394-98626413 | Msa0901760:CDS | 55.0% | |
| AAACCTATGGTCAGCGGCAG+TGG | - | chr6_1:98626427-98626446 | Msa0901760:CDS | 55.0% | |
| GATAGACCTTGCGGTCACGG+AGG | - | chr6_1:98624864-98624883 | Msa0901760:intron | 60.0% | |
| TCTTCTCCTCCGTGACCGCA+AGG | + | chr6_1:98624873-98624892 | None:intergenic | 60.0% | |
| ACGACCTCGATCCTGTGCGA+AGG | - | chr6_1:98625120-98625139 | Msa0901760:CDS | 60.0% | |
| CGACCTCGATCCTGTGCGAA+GGG | - | chr6_1:98625121-98625140 | Msa0901760:CDS | 60.0% | |
| CTGTGCGAAGGGACCTGTCT+CGG | - | chr6_1:98625132-98625151 | Msa0901760:CDS | 60.0% | |
| GAAGGGACCTGTCTCGGTTG+AGG | - | chr6_1:98625138-98625157 | Msa0901760:CDS | 60.0% | |
| GGTCCCTTCGCACAGGATCG+AGG | + | chr6_1:98625127-98625146 | None:intergenic | 65.0% | |
| CGAGACAGGTCCCTTCGCAC+AGG | + | chr6_1:98625134-98625153 | None:intergenic | 65.0% | |
| CGACCACTGCCGCTGACCAT+AGG | + | chr6_1:98626433-98626452 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 98623156 | 98626465 | 98623156 | ID=Msa0901760;Name=Msa0901760 |
| chr6_1 | mRNA | 98623156 | 98626465 | 98623156 | ID=Msa0901760-mRNA-1;Parent=Msa0901760;Name=Msa0901760-mRNA-1;_AED=0.40;_eAED=0.46;_QI=0|0|0|0.6|0.75|0.8|5|0|416 |
| chr6_1 | exon | 98626393 | 98626465 | 98626393 | ID=Msa0901760-mRNA-1:exon:17459;Parent=Msa0901760-mRNA-1 |
| chr6_1 | exon | 98625543 | 98625628 | 98625543 | ID=Msa0901760-mRNA-1:exon:17458;Parent=Msa0901760-mRNA-1 |
| chr6_1 | exon | 98625055 | 98625438 | 98625055 | ID=Msa0901760-mRNA-1:exon:17457;Parent=Msa0901760-mRNA-1 |
| chr6_1 | exon | 98623573 | 98623959 | 98623573 | ID=Msa0901760-mRNA-1:exon:17456;Parent=Msa0901760-mRNA-1 |
| chr6_1 | exon | 98623156 | 98623473 | 98623156 | ID=Msa0901760-mRNA-1:exon:17455;Parent=Msa0901760-mRNA-1 |
| chr6_1 | CDS | 98626393 | 98626465 | 98626393 | ID=Msa0901760-mRNA-1:cds;Parent=Msa0901760-mRNA-1 |
| chr6_1 | CDS | 98625543 | 98625628 | 98625543 | ID=Msa0901760-mRNA-1:cds;Parent=Msa0901760-mRNA-1 |
| chr6_1 | CDS | 98625055 | 98625438 | 98625055 | ID=Msa0901760-mRNA-1:cds;Parent=Msa0901760-mRNA-1 |
| chr6_1 | CDS | 98623573 | 98623959 | 98623573 | ID=Msa0901760-mRNA-1:cds;Parent=Msa0901760-mRNA-1 |
| chr6_1 | CDS | 98623156 | 98623473 | 98623156 | ID=Msa0901760-mRNA-1:cds;Parent=Msa0901760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
