AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0902330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0902330 MtrunA17_Chr5g0418781 91.727 278 23 0 1 278 1 278 1.82e-179 495
Msa0902330 MtrunA17_Chr1g0194481 46.073 191 84 3 98 270 132 321 2.62e-45 155
Msa0902330 MtrunA17_Chr7g0270191 47.644 191 64 6 98 270 119 291 1.02e-41 145
Msa0902330 MtrunA17_Chr4g0051881 50.279 179 74 5 110 277 164 338 1.30e-40 143
Msa0902330 MtrunA17_Chr5g0443131 83.333 72 12 0 110 181 143 214 5.10e-40 141
Msa0902330 MtrunA17_Chr2g0294231 82.192 73 13 0 108 180 187 259 3.40e-38 138
Msa0902330 MtrunA17_Chr8g0335811 66.265 83 28 0 98 180 128 210 2.77e-33 121
Msa0902330 MtrunA17_Chr3g0129361 68.919 74 23 0 107 180 127 200 4.24e-32 118
Msa0902330 MtrunA17_Chr4g0068541 60.417 96 35 1 108 200 192 287 9.34e-32 121
Msa0902330 MtrunA17_Chr8g0383351 68.000 75 23 1 107 180 142 216 2.19e-30 114
Msa0902330 MtrunA17_Chr7g0224801 66.667 69 23 0 112 180 81 149 7.89e-29 108
Msa0902330 MtrunA17_Chr7g0248721 58.511 94 36 2 89 180 104 196 2.35e-28 108
Msa0902330 MtrunA17_Chr3g0079691 56.383 94 40 1 88 180 458 551 4.59e-27 110
Msa0902330 MtrunA17_Chr3g0079691 39.200 125 68 3 61 180 214 335 9.28e-19 85.9
Msa0902330 MtrunA17_Chr5g0445311 55.208 96 39 2 105 197 345 439 4.74e-27 109
Msa0902330 MtrunA17_Chr5g0445311 62.500 56 20 1 125 180 201 255 1.91e-15 75.9
Msa0902330 MtrunA17_Chr7g0218081 49.107 112 51 2 104 215 390 495 6.62e-27 109
Msa0902330 MtrunA17_Chr7g0218081 46.067 89 32 2 107 180 196 283 6.13e-17 80.5
Msa0902330 MtrunA17_Chr3g0101131 63.158 76 28 0 105 180 396 471 7.22e-27 109
Msa0902330 MtrunA17_Chr3g0101131 59.649 57 22 1 124 180 243 298 2.99e-15 75.5
Msa0902330 MtrunA17_Chr1g0150801 57.143 84 36 0 97 180 75 158 1.60e-26 101
Msa0902330 MtrunA17_Chr8g0386241 51.220 82 40 0 99 180 78 159 4.04e-26 101
Msa0902330 MtrunA17_Chr5g0418191 45.763 118 50 2 75 180 261 376 5.47e-26 105
Msa0902330 MtrunA17_Chr5g0418191 59.649 57 22 1 124 180 151 206 1.43e-15 76.3
Msa0902330 MtrunA17_Chr3g0106491 57.692 78 33 0 103 180 344 421 1.35e-25 105
Msa0902330 MtrunA17_Chr3g0106491 47.222 72 33 2 109 180 187 253 5.29e-13 68.6
Msa0902330 MtrunA17_Chr3g0129321 54.795 73 33 0 110 182 104 176 2.93e-25 99.8
Msa0902330 MtrunA17_Chr4g0042831 56.579 76 33 0 105 180 259 334 1.21e-24 101
Msa0902330 MtrunA17_Chr4g0042831 37.615 109 59 3 95 201 118 219 2.39e-16 78.2
Msa0902330 MtrunA17_Chr4g0004911 55.696 79 35 0 102 180 314 392 7.02e-24 100
Msa0902330 MtrunA17_Chr4g0004911 59.649 57 23 0 124 180 184 240 1.33e-16 79.3
Msa0902330 MtrunA17_Chr5g0432161 53.659 82 38 0 99 180 396 477 9.89e-24 100
Msa0902330 MtrunA17_Chr5g0432161 57.895 57 23 1 124 180 244 299 3.14e-13 69.3
Msa0902330 MtrunA17_Chr7g0249311 53.947 76 35 0 105 180 373 448 1.59e-23 100
Msa0902330 MtrunA17_Chr7g0249311 43.860 114 57 3 68 180 127 234 2.84e-18 84.7
Msa0902330 MtrunA17_Chr7g0238921 39.873 158 78 4 124 272 124 273 1.83e-23 97.4
Msa0902330 MtrunA17_Chr7g0249301 53.247 77 36 0 104 180 272 348 3.93e-23 97.4
Msa0902330 MtrunA17_Chr7g0249301 39.695 131 64 5 69 191 5 128 4.28e-17 80.5
Msa0902330 MtrunA17_Chr8g0383251 45.000 120 56 3 70 180 46 164 4.39e-23 93.2
Msa0902330 MtrunA17_Chr1g0188941 52.055 73 35 0 108 180 35 107 4.42e-22 88.6
Msa0902330 MtrunA17_Chr7g0243891 53.947 76 35 0 105 180 355 430 7.37e-22 94.7
Msa0902330 MtrunA17_Chr7g0243891 59.649 57 22 1 124 180 216 271 8.35e-15 74.3
Msa0902330 MtrunA17_Chr7g0263531 51.351 74 36 0 107 180 344 417 8.83e-21 91.3
Msa0902330 MtrunA17_Chr7g0263531 60.714 56 21 1 125 180 190 244 5.11e-15 74.7
Msa0902330 MtrunA17_Chr5g0447701 58.571 70 29 0 111 180 239 308 2.08e-20 89.7
Msa0902330 MtrunA17_Chr5g0447701 54.386 57 25 1 124 180 92 147 2.39e-12 66.6
Msa0902330 MtrunA17_Chr2g0288871 38.037 163 82 7 32 180 205 362 3.36e-20 90.1
Msa0902330 MtrunA17_Chr2g0322391 45.349 86 46 1 96 180 321 406 5.92e-20 89.4
Msa0902330 MtrunA17_Chr6g0485431 47.436 78 37 2 110 186 140 214 3.13e-19 86.3
Msa0902330 MtrunA17_Chr3g0099641 48.000 75 38 1 107 180 234 308 6.13e-19 86.3
Msa0902330 MtrunA17_Chr4g0075201 49.333 75 37 1 107 180 250 324 2.12e-18 84.7
Msa0902330 MtrunA17_Chr7g0270831 49.333 75 37 1 107 180 199 273 6.53e-18 83.2
Msa0902330 MtrunA17_Chr1g0150281 41.346 104 49 4 83 180 100 197 6.73e-18 81.6
Msa0902330 MtrunA17_Chr2g0333851 49.315 73 34 2 111 180 154 226 1.41e-17 81.3
Msa0902330 MtrunA17_Chr4g0074001 48.000 75 39 0 108 182 343 417 1.45e-17 82.4
Msa0902330 MtrunA17_Chr1g0189391 45.946 74 39 1 111 183 84 157 1.03e-16 79.0
Msa0902330 MtrunA17_Chr1g0147881 42.683 82 46 1 100 180 238 319 1.05e-16 79.0
Msa0902330 MtrunA17_Chr2g0284321 52.308 65 29 2 125 188 36 99 1.21e-16 76.6
Msa0902330 MtrunA17_Chr4g0071521 38.542 96 58 1 99 193 220 315 1.58e-16 78.2
Msa0902330 MtrunA17_Chr4g0060271 39.474 114 60 3 76 180 199 312 1.79e-16 79.3
Msa0902330 MtrunA17_Chr2g0302391 38.596 114 61 4 94 204 184 291 2.12e-16 78.6
Msa0902330 MtrunA17_Chr5g0401821 44.578 83 45 1 99 180 174 256 2.15e-16 77.0
Msa0902330 MtrunA17_Chr8g0387501 54.237 59 26 1 123 180 128 186 3.85e-16 76.3
Msa0902330 MtrunA17_Chr4g0025061 34.667 150 86 4 33 180 278 417 4.35e-16 78.2
Msa0902330 MtrunA17_Chr3g0136961 50.000 60 29 1 122 180 136 195 4.37e-16 76.6
Msa0902330 MtrunA17_Chr4g0051181 47.297 74 38 1 108 180 227 300 7.31e-16 77.0
Msa0902330 MtrunA17_Chr3g0139021 44.578 83 44 2 100 181 291 372 9.40e-16 76.6
Msa0902330 MtrunA17_Chr7g0216891 39.316 117 56 3 76 180 163 276 1.01e-15 77.0
Msa0902330 MtrunA17_Chr8g0348311 54.386 57 25 1 125 180 156 212 3.85e-15 74.3
Msa0902330 MtrunA17_Chr8g0379461 54.386 57 25 1 125 180 77 133 3.86e-15 73.2
Msa0902330 MtrunA17_Chr7g0228941 50.820 61 29 1 125 184 53 113 4.75e-15 70.1
Msa0902330 MtrunA17_Chr8g0387981 44.828 87 40 2 100 178 103 189 5.32e-15 74.3
Msa0902330 MtrunA17_Chr2g0319961 50.769 65 30 2 125 188 81 144 8.25e-15 72.4
Msa0902330 MtrunA17_Chr7g0275531 50.000 68 30 2 123 186 117 184 8.85e-15 73.2
Msa0902330 MtrunA17_Chr2g0293481 52.632 57 26 1 125 180 268 324 9.32e-15 73.9
Msa0902330 MtrunA17_Chr5g0447711 47.222 72 38 0 109 180 215 286 1.03e-14 72.8
Msa0902330 MtrunA17_Chr8g0347251 35.000 140 83 4 43 178 58 193 1.41e-14 72.8
Msa0902330 MtrunA17_Chr3g0126391 54.237 59 24 1 123 178 132 190 1.63e-14 72.4
Msa0902330 MtrunA17_Chr7g0248691 54.386 57 25 1 125 180 155 211 1.77e-14 72.4
Msa0902330 MtrunA17_Chr1g0150271 44.615 65 32 2 123 186 100 161 2.03e-14 71.2
Msa0902330 MtrunA17_Chr4g0025051 46.479 71 37 1 111 180 322 392 2.13e-14 73.2
Msa0902330 MtrunA17_Chr4g0053281 38.947 95 55 2 98 191 242 334 2.40e-14 72.0
Msa0902330 MtrunA17_Chr4g0001361 47.458 59 30 1 123 180 161 219 2.61e-14 71.6
Msa0902330 MtrunA17_Chr1g0184691 50.000 60 29 1 125 183 294 353 5.92e-14 71.2
Msa0902330 MtrunA17_Chr7g0270051 52.632 57 26 1 125 180 54 110 8.15e-14 69.7
Msa0902330 MtrunA17_Chr7g0244981 30.625 160 96 4 22 178 32 179 1.42e-13 69.3
Msa0902330 MtrunA17_Chr1g0202461 52.632 57 26 1 125 180 262 318 4.30e-13 68.6
Msa0902330 MtrunA17_Chr7g0244971 43.421 76 37 2 123 195 122 194 4.89e-13 67.8
Msa0902330 MtrunA17_Chr2g0315381 38.043 92 48 3 123 206 143 233 1.57e-12 66.6
Msa0902330 MtrunA17_Chr5g0428351 34.167 120 61 6 97 206 154 265 2.53e-12 65.9
Msa0902330 MtrunA17_Chr2g0315361 40.506 79 41 2 123 198 147 222 1.19e-11 63.9
Msa0902330 MtrunA17_Chr3g0128671 30.357 168 109 5 44 206 49 213 1.79e-11 63.5
Msa0902330 MtrunA17_Chr2g0289181 48.276 58 29 1 124 180 14 71 2.40e-11 62.4
Msa0902330 MtrunA17_Chr8g0334541 46.552 58 28 1 124 178 103 160 2.69e-11 62.8
Msa0902330 MtrunA17_Chr8g0350621 40.299 67 36 2 124 186 111 177 3.57e-11 62.0
Msa0902330 MtrunA17_Chr4g0024391 40.000 70 41 1 107 175 212 281 4.43e-11 62.8
Msa0902330 MtrunA17_Chr5g0432071 49.123 57 28 1 124 180 104 159 5.20e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0902330 AT1G69310.4 56.872 211 72 4 68 272 89 286 1.25e-68 214
Msa0902330 AT1G69310.2 56.872 211 72 4 68 272 89 286 1.25e-68 214
Msa0902330 AT1G69310.1 56.872 211 72 4 68 272 89 286 1.25e-68 214
Msa0902330 AT1G69310.3 55.450 211 71 5 68 272 89 282 8.03e-63 199
Msa0902330 AT4G18170.1 78.313 83 18 0 98 180 146 228 5.81e-41 144
Msa0902330 AT2G47260.1 78.313 83 18 0 98 180 148 230 7.45e-41 144
Msa0902330 AT1G29860.1 45.455 165 75 4 108 267 120 274 9.73e-38 134
Msa0902330 AT5G46350.1 81.690 71 13 0 110 180 169 239 2.66e-37 134
Msa0902330 AT5G49520.1 56.364 110 41 1 108 210 205 314 2.14e-35 131
Msa0902330 AT4G39410.1 54.054 111 46 1 100 210 199 304 2.82e-34 126
Msa0902330 AT2G44745.1 66.265 83 28 0 98 180 119 201 1.45e-33 122
Msa0902330 AT3G62340.1 64.634 82 27 1 99 180 95 174 2.19e-31 118
Msa0902330 AT2G46130.1 63.158 76 28 0 105 180 11 86 1.23e-29 108
Msa0902330 AT1G64000.1 58.537 82 34 0 99 180 89 170 3.96e-29 110
Msa0902330 AT5G13080.1 67.143 70 23 0 111 180 54 123 8.00e-29 107
Msa0902330 AT5G41570.1 57.955 88 36 1 94 180 67 154 2.04e-28 107
Msa0902330 AT3G01970.1 64.286 70 25 0 111 180 52 121 3.93e-27 103
Msa0902330 AT5G26170.1 60.274 73 29 0 111 183 100 172 1.70e-26 102
Msa0902330 AT5G07100.2 38.312 154 81 3 41 191 65 207 1.90e-26 103
Msa0902330 AT5G07100.2 50.877 57 28 0 124 180 24 80 2.85e-12 65.1
Msa0902330 AT5G07100.4 38.312 154 81 3 41 191 65 207 1.90e-26 103
Msa0902330 AT5G07100.4 50.877 57 28 0 124 180 24 80 2.85e-12 65.1
Msa0902330 AT5G07100.5 38.312 154 81 3 41 191 65 207 1.90e-26 103
Msa0902330 AT5G07100.5 50.877 57 28 0 124 180 24 80 2.85e-12 65.1
Msa0902330 AT5G07100.3 38.312 154 81 3 41 191 65 207 1.90e-26 103
Msa0902330 AT5G07100.3 50.877 57 28 0 124 180 24 80 2.85e-12 65.1
Msa0902330 AT5G07100.1 38.312 154 81 3 41 191 158 300 5.19e-26 104
Msa0902330 AT5G07100.1 50.877 57 28 0 124 180 117 173 2.37e-12 66.6
Msa0902330 AT1G13960.2 59.459 74 30 0 107 180 239 312 1.37e-25 104
Msa0902330 AT1G13960.2 63.158 57 20 1 124 180 76 131 9.60e-17 79.7
Msa0902330 AT1G13960.1 57.895 76 32 0 105 180 390 465 1.64e-25 105
Msa0902330 AT1G13960.1 63.158 57 20 1 124 180 229 284 5.00e-17 81.3
Msa0902330 AT4G26640.5 43.478 138 60 4 50 180 135 261 1.66e-25 104
Msa0902330 AT4G26640.5 61.404 57 21 1 124 180 35 90 2.27e-15 75.9
Msa0902330 AT4G26640.6 43.478 138 60 4 50 180 135 261 1.66e-25 104
Msa0902330 AT4G26640.6 61.404 57 21 1 124 180 35 90 2.27e-15 75.9
Msa0902330 AT4G26640.4 43.478 138 60 4 50 180 135 261 1.66e-25 104
Msa0902330 AT4G26640.4 61.404 57 21 1 124 180 35 90 2.27e-15 75.9
Msa0902330 AT4G26640.3 43.478 138 60 4 50 180 135 261 1.66e-25 104
Msa0902330 AT4G26640.3 61.404 57 21 1 124 180 35 90 2.27e-15 75.9
Msa0902330 AT4G26640.7 61.842 76 29 0 105 180 322 397 3.07e-25 105
Msa0902330 AT4G26640.7 61.404 57 21 1 124 180 171 226 2.08e-15 76.3
Msa0902330 AT4G26640.2 61.842 76 29 0 105 180 362 437 3.54e-25 105
Msa0902330 AT4G26640.2 61.404 57 21 1 124 180 211 266 2.08e-15 76.3
Msa0902330 AT4G26640.1 61.842 76 29 0 105 180 290 365 3.56e-25 104
Msa0902330 AT4G26640.1 61.404 57 21 1 124 180 139 194 2.36e-15 76.3
Msa0902330 AT2G03340.1 57.895 76 32 0 105 180 396 471 4.32e-25 104
Msa0902330 AT2G03340.1 61.404 57 21 1 124 180 250 305 4.96e-16 78.2
Msa0902330 AT3G01080.2 58.442 77 32 0 104 180 324 400 1.13e-24 102
Msa0902330 AT3G01080.2 57.895 57 23 1 124 180 205 260 4.51e-15 75.1
Msa0902330 AT3G01080.1 58.442 77 32 0 104 180 286 362 1.56e-24 102
Msa0902330 AT3G01080.1 57.895 57 23 1 124 180 167 222 6.11e-15 74.7
Msa0902330 AT5G56270.1 60.526 76 30 0 105 180 468 543 1.93e-24 103
Msa0902330 AT5G56270.1 63.158 57 20 1 124 180 273 328 1.64e-16 79.7
Msa0902330 AT5G64810.1 49.412 85 43 0 99 183 85 169 3.22e-24 97.1
Msa0902330 AT2G46130.2 57.895 76 28 1 105 180 11 82 3.87e-24 94.0
Msa0902330 AT2G37260.3 45.631 103 56 0 84 186 229 331 7.32e-24 99.4
Msa0902330 AT2G37260.3 53.333 75 32 2 125 197 86 159 7.91e-15 73.9
Msa0902330 AT2G37260.2 45.631 103 56 0 84 186 227 329 7.42e-24 99.4
Msa0902330 AT2G37260.2 53.333 75 32 2 125 197 84 157 7.74e-15 73.9
Msa0902330 AT2G38470.1 57.895 76 32 0 105 180 343 418 9.90e-24 100
Msa0902330 AT2G38470.1 59.649 57 22 1 124 180 184 239 1.59e-13 70.9
Msa0902330 AT2G37260.1 45.631 103 56 0 84 186 309 411 1.32e-23 99.8
Msa0902330 AT2G37260.1 53.333 75 32 2 125 197 166 239 7.94e-15 74.3
Msa0902330 AT2G30250.1 56.579 76 33 0 105 180 309 384 1.02e-22 96.7
Msa0902330 AT2G30250.1 38.655 119 58 5 71 180 109 221 7.37e-11 62.4
Msa0902330 AT4G26440.1 57.534 73 31 0 108 180 356 428 2.15e-22 97.1
Msa0902330 AT4G26440.1 59.649 57 22 1 124 180 178 233 1.88e-15 76.6
Msa0902330 AT2G04880.2 47.253 91 45 1 111 201 270 357 5.74e-22 95.1
Msa0902330 AT2G04880.2 56.897 58 24 1 123 180 110 166 2.78e-14 72.8
Msa0902330 AT2G04880.1 47.253 91 45 1 111 201 294 381 8.44e-22 95.1
Msa0902330 AT2G04880.1 56.897 58 24 1 123 180 110 166 3.26e-14 72.8
Msa0902330 AT5G43290.1 31.250 176 95 4 111 272 100 263 6.03e-20 87.4
Msa0902330 AT2G21900.1 43.478 92 47 2 94 180 74 165 9.94e-20 85.1
Msa0902330 AT1G55600.1 52.857 70 33 0 111 180 294 363 1.70e-19 88.2
Msa0902330 AT4G04450.2 52.000 75 35 1 107 180 181 255 5.48e-19 86.7
Msa0902330 AT1G62300.1 38.583 127 73 3 56 180 246 369 1.20e-18 85.9
Msa0902330 AT4G04450.1 52.000 75 35 1 107 180 275 349 1.22e-18 85.9
Msa0902330 AT4G22070.4 49.333 75 37 1 107 180 280 354 5.89e-18 84.0
Msa0902330 AT4G22070.3 49.333 75 37 1 107 180 280 354 5.89e-18 84.0
Msa0902330 AT4G22070.2 49.333 75 37 1 107 180 280 354 5.89e-18 84.0
Msa0902330 AT4G22070.1 49.333 75 37 1 107 180 280 354 5.89e-18 84.0
Msa0902330 AT2G25000.2 54.237 59 26 1 123 180 102 160 3.42e-17 79.0
Msa0902330 AT2G25000.4 54.237 59 26 1 123 180 102 160 3.42e-17 79.0
Msa0902330 AT2G25000.3 54.237 59 26 1 123 180 124 182 4.80e-17 79.0
Msa0902330 AT2G25000.1 54.237 59 26 1 123 180 145 203 6.56e-17 79.0
Msa0902330 AT4G31800.2 50.847 59 28 1 123 180 110 168 1.94e-16 77.0
Msa0902330 AT5G15130.1 43.590 78 43 1 104 180 207 284 2.47e-16 79.0
Msa0902330 AT1G68150.1 48.649 74 37 1 108 180 219 292 2.48e-16 78.6
Msa0902330 AT5G15130.2 43.590 78 43 1 104 180 165 242 2.55e-16 79.0
Msa0902330 AT1G18860.1 44.872 78 42 1 104 180 219 296 2.55e-16 79.0
Msa0902330 AT4G30935.1 40.206 97 57 1 108 204 315 410 2.60e-16 79.0
Msa0902330 AT4G31800.1 50.847 59 28 1 123 180 175 233 2.89e-16 77.8
Msa0902330 AT4G01720.1 48.649 74 37 1 108 180 223 296 3.54e-16 78.6
Msa0902330 AT5G52830.1 41.414 99 49 3 102 199 143 233 4.07e-16 77.8
Msa0902330 AT1G29280.1 40.000 90 49 2 96 180 42 131 8.93e-16 75.5
Msa0902330 AT1G80840.1 49.153 59 29 1 123 180 145 203 1.31e-15 75.9
Msa0902330 AT3G01080.3 57.895 57 23 1 124 180 205 260 1.53e-15 75.9
Msa0902330 AT2G30590.1 42.169 83 47 1 99 180 288 370 3.07e-15 75.5
Msa0902330 AT4G31550.2 42.169 83 47 1 100 181 221 303 3.99e-15 74.7
Msa0902330 AT1G30650.1 41.860 86 47 2 98 180 189 274 4.49e-15 75.1
Msa0902330 AT2G24570.1 44.828 87 43 3 97 181 218 301 6.95e-15 73.9
Msa0902330 AT3G58710.1 41.837 98 49 3 96 188 39 133 8.11e-15 73.2
Msa0902330 AT4G31550.1 44.186 86 43 3 98 181 222 304 9.12e-15 73.6
Msa0902330 AT2G34830.1 52.632 57 26 1 125 180 216 272 1.26e-14 73.9
Msa0902330 AT1G69810.2 29.762 168 90 5 19 180 58 203 1.30e-14 73.2
Msa0902330 AT2G34830.2 52.632 57 26 1 125 180 225 281 1.37e-14 73.6
Msa0902330 AT4G01250.1 39.326 89 50 3 93 180 100 185 1.75e-14 72.4
Msa0902330 AT1G69810.1 29.762 168 90 5 19 180 116 261 2.27e-14 72.8
Msa0902330 AT2G23320.1 43.373 83 46 1 99 180 215 297 2.38e-14 72.4
Msa0902330 AT3G58710.2 39.474 114 60 4 81 188 22 132 4.62e-14 70.9
Msa0902330 AT4G24240.1 40.698 86 50 1 99 183 256 341 4.86e-14 71.6
Msa0902330 AT4G23550.1 49.206 63 31 1 119 180 135 197 8.18e-14 70.9
Msa0902330 AT5G45050.4 54.386 57 25 1 125 180 1042 1098 9.89e-14 71.6
Msa0902330 AT5G45050.1 54.386 57 25 1 125 180 1181 1237 1.07e-13 71.6
Msa0902330 AT5G45050.2 54.386 57 25 1 125 180 1153 1209 1.09e-13 71.6
Msa0902330 AT2G46400.1 31.092 119 79 1 73 188 53 171 1.21e-13 70.1
Msa0902330 AT5G28650.1 38.614 101 54 2 99 198 237 330 2.43e-13 69.3
Msa0902330 AT1G66560.1 45.312 64 32 1 124 184 103 166 6.98e-13 67.4
Msa0902330 AT2G40740.1 47.619 63 29 2 124 182 173 235 8.76e-13 67.4
Msa0902330 AT2G40740.3 47.619 63 29 2 124 182 182 244 1.08e-12 67.4
Msa0902330 AT3G04670.1 37.624 101 55 2 99 198 237 330 1.18e-12 67.4
Msa0902330 AT5G24110.1 41.414 99 51 4 84 178 75 170 1.50e-12 67.0
Msa0902330 AT4G11070.2 47.761 67 31 2 124 186 109 175 1.64e-12 66.6
Msa0902330 AT1G66600.1 46.154 65 32 1 123 184 102 166 1.82e-12 65.9
Msa0902330 AT4G11070.1 47.761 67 31 2 124 186 141 207 2.18e-12 66.6
Msa0902330 AT3G56400.1 41.333 75 40 2 123 193 119 193 2.46e-12 66.2
Msa0902330 AT5G01900.1 49.123 57 26 1 125 178 111 167 4.23e-12 65.1
Msa0902330 AT4G12020.11 41.176 85 45 2 61 144 581 661 5.27e-12 66.6
Msa0902330 AT4G12020.10 41.176 85 45 2 61 144 581 661 5.93e-12 66.2
Msa0902330 AT4G12020.10 49.153 59 29 1 122 180 466 523 6.34e-11 63.2
Msa0902330 AT4G12020.6 41.176 85 45 2 61 144 581 661 6.05e-12 66.2
Msa0902330 AT4G12020.6 49.153 59 29 1 122 180 466 523 6.78e-11 63.2
Msa0902330 AT4G12020.8 41.176 85 45 2 61 144 581 661 6.05e-12 66.2
Msa0902330 AT4G12020.8 49.153 59 29 1 122 180 466 523 6.78e-11 63.2
Msa0902330 AT4G12020.5 41.176 85 45 2 61 144 514 594 6.07e-12 66.2
Msa0902330 AT4G12020.5 49.153 59 29 1 122 180 399 456 6.80e-11 63.2
Msa0902330 AT4G12020.3 41.176 85 45 2 61 144 581 661 6.15e-12 66.2
Msa0902330 AT4G12020.3 49.153 59 29 1 122 180 466 523 6.46e-11 63.2
Msa0902330 AT4G12020.4 41.176 85 45 2 61 144 581 661 6.33e-12 66.2
Msa0902330 AT4G12020.4 49.153 59 29 1 122 180 466 523 6.46e-11 63.2
Msa0902330 AT4G12020.2 41.176 85 45 2 61 144 581 661 6.63e-12 66.2
Msa0902330 AT4G12020.2 49.153 59 29 1 122 180 466 523 6.76e-11 63.2
Msa0902330 AT4G12020.1 41.176 85 45 2 61 144 581 661 6.65e-12 66.2
Msa0902330 AT4G12020.1 49.153 59 29 1 122 180 466 523 6.79e-11 63.2
Msa0902330 AT4G12020.9 41.176 85 45 2 61 144 581 661 6.65e-12 66.2
Msa0902330 AT4G12020.9 49.153 59 29 1 122 180 466 523 6.79e-11 63.2
Msa0902330 AT4G12020.7 41.176 85 45 2 61 144 581 661 6.83e-12 66.2
Msa0902330 AT4G12020.7 49.153 59 29 1 122 180 466 523 7.04e-11 63.2
Msa0902330 AT1G66550.2 49.123 57 26 1 125 178 104 160 8.06e-12 64.3
Msa0902330 AT1G66550.1 49.123 57 26 1 125 178 109 165 9.83e-12 63.9
Msa0902330 AT4G23810.1 45.312 64 31 2 124 183 158 221 4.36e-11 62.8
Msa0902330 AT5G45260.1 30.000 140 90 3 44 180 1133 1267 5.21e-11 63.5
Msa0902330 AT2G40750.1 46.552 58 28 1 124 178 152 209 7.86e-11 62.4

Find 90 sgRNAs with CRISPR-Local

Find 577 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTCTTTCTCTTCCATACA+TGG 0.278836 6_1:-100458493 None:intergenic
CGGCGTCAGCGTCGTCTTAC+AGG 0.278972 6_1:+100458677 Msa0902330:CDS
AGTTTATCCTTGGTGGTTTC+CGG 0.298380 6_1:-100458610 None:intergenic
TACCCCGTGGAATGCGCAAC+AGG 0.355074 6_1:+100466719 Msa0902330:CDS
TATGTAGTTATAACAATTGT+TGG 0.364884 6_1:-100466421 None:intergenic
AACTCTGCAGGTAATTGAAC+AGG 0.390496 6_1:-100466553 None:intergenic
CATCCCTGTTGCGCATTCCA+CGG 0.391032 6_1:-100466723 None:intergenic
GGCTACAGATGGAGGAAGTA+TGG 0.393103 6_1:+100465533 Msa0902330:CDS
AGTTCGTTGGCAGCTCAAAC+TGG 0.401902 6_1:+100458530 Msa0902330:CDS
ATCCCTGTTGCGCATTCCAC+GGG 0.402445 6_1:-100466722 None:intergenic
CTAGCTGATGAAGGACTACT+TGG 0.404925 6_1:+100466688 Msa0902330:CDS
TTGCACCACCACTGTTTCTC+AGG 0.407420 6_1:+100466582 Msa0902330:CDS
GTAAATGCACGGTGAAGAAA+AGG 0.427885 6_1:+100466377 Msa0902330:CDS
GGAAGTTCATAGAAAACAAA+TGG 0.433289 6_1:-100458382 None:intergenic
CTTGTTGCAGGAGCTACTAT+AGG 0.437423 6_1:+100466344 Msa0902330:intron
TTTCACTCGTAATCCATGTA+TGG 0.440465 6_1:+100458480 Msa0902330:exon
ATCGAGCAGCGCTACAATGC+CGG 0.445819 6_1:+100466642 Msa0902330:CDS
GGCTGATGCATCACCGCCGC+TGG 0.448875 6_1:+100466663 Msa0902330:CDS
CTGTTGCAACCGGTTCAAAC+AGG 0.448934 6_1:+100458631 Msa0902330:CDS
TTGCAACAGTTTATCCTTGG+TGG 0.452161 6_1:-100458617 None:intergenic
TCAGTTGAACCTGTTTGAAC+CGG 0.456839 6_1:-100458640 None:intergenic
TAATAGAATTGAGGCATTGT+AGG 0.457087 6_1:-100466529 None:intergenic
AGAAGGGGCAAAAGCGAATA+CGG 0.458868 6_1:+100465459 Msa0902330:CDS
AAGTGATTCTGATGGAGAAA+TGG 0.471204 6_1:-100458412 None:intergenic
ATATAAATAACTTGTTCTAA+AGG 0.471320 6_1:-100466817 None:intergenic
TAGGAACAAAAGTAAGAAGA+AGG 0.476897 6_1:+100465442 Msa0902330:intron
TTTCTCCGGCAGATCCTCGC+TGG 0.483845 6_1:-100458728 None:intergenic
CGGCGGTTTCTCATCGGAGA+CGG 0.486980 6_1:-100458755 None:intergenic
GAGGCATTGTAGGAGCAAAC+TGG 0.488963 6_1:-100466519 None:intergenic
AAGCTCCAGCGAGGATCTGC+CGG 0.489814 6_1:+100458723 Msa0902330:CDS
TGAGCTGCCAACGAACTCTT+CGG 0.492002 6_1:-100458524 None:intergenic
ATGTAGTTATAACAATTGTT+GGG 0.492053 6_1:-100466420 None:intergenic
GTGCAAGTGTTTAACTCTGC+AGG 0.495119 6_1:-100466565 None:intergenic
CGGTTGCAACAGTTTATCCT+TGG 0.501026 6_1:-100458620 None:intergenic
GGGATGAGAGAAATATTTGA+TGG 0.502837 6_1:+100466740 Msa0902330:CDS
CAAGGATAAACTGTTGCAAC+CGG 0.502840 6_1:+100458621 Msa0902330:CDS
TCAAACAGGTTCAACTGAAA+CGG 0.505312 6_1:+100458645 Msa0902330:CDS
ATAGGTTCGACCACATCGGC+TGG 0.509291 6_1:+100458578 Msa0902330:CDS
TCGGAGACGGTGGATTTCTC+CGG 0.513021 6_1:-100458742 None:intergenic
TGACTAATGATTCCACTTCG+AGG 0.515148 6_1:-100466478 None:intergenic
AAGATGATCAACTTCACTCT+TGG 0.519601 6_1:-100465504 None:intergenic
ATTGTTATAACTACATATGA+AGG 0.523487 6_1:+100466427 Msa0902330:CDS
AACTGAAACGGCATCGGTGT+CGG 0.528007 6_1:+100458657 Msa0902330:CDS
CATCATCCTCATGAGGCCGC+TGG 0.543236 6_1:+100466616 Msa0902330:CDS
GTGCGTAGATTATTGTGAGA+AGG 0.550327 6_1:-100458304 None:intergenic
ATGGAGGAAGTATGGTCAGA+AGG 0.553401 6_1:+100465541 Msa0902330:CDS
GATCCTCCAGCGGCCTCATG+AGG 0.556070 6_1:-100466622 None:intergenic
CTTTATGAAACGTTTGAAAG+CGG 0.562281 6_1:-100458260 None:intergenic
CCGCTGGATCTAGCTGATGA+AGG 0.564179 6_1:+100466679 Msa0902330:CDS
TGAACAGGATAATAGAATTG+AGG 0.567757 6_1:-100466538 None:intergenic
TAGATTATTGTGAGAAGGAA+GGG 0.573663 6_1:-100458299 None:intergenic
CAACATTGTCATCACACAGT+TGG 0.575164 6_1:+100466451 Msa0902330:CDS
AGGAACAAAAGTAAGAAGAA+GGG 0.576712 6_1:+100465443 Msa0902330:intron
GATGTGGTCGAACCTATCGC+TGG 0.578566 6_1:-100458572 None:intergenic
ACAGTTGGATTTCCTCGAAG+TGG 0.579381 6_1:+100466466 Msa0902330:CDS
AGCGGCGGTGATGCATCAGC+CGG 0.584373 6_1:-100466661 None:intergenic
TAAATGCACGGTGAAGAAAA+GGG 0.590194 6_1:+100466378 Msa0902330:CDS
GGAACAAAAGTAAGAAGAAG+GGG 0.592127 6_1:+100465444 Msa0902330:intron
GTAGATTATTGTGAGAAGGA+AGG 0.593768 6_1:-100458300 None:intergenic
CATCGGCTGGAATCTTGTAC+CGG 0.594865 6_1:+100458591 Msa0902330:CDS
ATCTTGAGGATGGCTACAGA+TGG 0.596823 6_1:+100465522 Msa0902330:CDS
GAAGTTGATCATCTTGAGGA+TGG 0.599686 6_1:+100465512 Msa0902330:CDS
AAATCTGAAAGTGATTCTGA+TGG 0.599998 6_1:-100458420 None:intergenic
AGGTTCAACTGAAACGGCAT+CGG 0.603789 6_1:+100458651 Msa0902330:CDS
TTGAGGATGGCTACAGATGG+AGG 0.606728 6_1:+100465525 Msa0902330:CDS
ACGTTGATGATTCCAGCGAT+AGG 0.613832 6_1:+100458560 Msa0902330:CDS
GAGTGAAGTTGATCATCTTG+AGG 0.617670 6_1:+100465508 Msa0902330:CDS
CGGTTTCTCATCGGAGACGG+TGG 0.623854 6_1:-100458752 None:intergenic
GTGAGAAGGAAGGGACGCGT+AGG 0.624519 6_1:-100458290 None:intergenic
AAGGGTTGAACGCTCTCATG+AGG 0.627595 6_1:+100466396 Msa0902330:CDS
CATCCTCATGAGGCCGCTGG+AGG 0.629985 6_1:+100466619 Msa0902330:CDS
CTGCCAACGAACTCTTCGGT+AGG 0.631444 6_1:-100458520 None:intergenic
ACCCCGTGGAATGCGCAACA+GGG 0.634896 6_1:+100466720 Msa0902330:CDS
GCACCTACCGAAGAGTTCGT+TGG 0.637032 6_1:+100458517 Msa0902330:CDS
GTACAAGATTCCAGCCGATG+TGG 0.646288 6_1:-100458588 None:intergenic
GTGCACAAATAGTAAATGCA+CGG 0.652957 6_1:+100466366 Msa0902330:CDS
CCTTCATCAGCTAGATCCAG+CGG 0.658825 6_1:-100466679 None:intergenic
TCAAACACATCATCCTCATG+AGG 0.661604 6_1:+100466609 Msa0902330:CDS
AAAAGCGAATACGGCAACCA+CGG 0.672921 6_1:+100465468 Msa0902330:CDS
AGCGATAGGTTCGACCACAT+CGG 0.679999 6_1:+100458574 Msa0902330:CDS
AGCGCTGCTCGATCCTCCAG+CGG 0.686245 6_1:-100466632 None:intergenic
TCTTGTACCGGAAACCACCA+AGG 0.687820 6_1:+100458603 Msa0902330:CDS
CTTGGAGATATTGTACCCCG+TGG 0.693708 6_1:+100466706 Msa0902330:CDS
AATTTCTTCAAGCTCCAGCG+AGG 0.699919 6_1:+100458714 Msa0902330:CDS
TCCCTGTTGCGCATTCCACG+GGG 0.706727 6_1:-100466721 None:intergenic
CAACTGTGTGATGACAATGT+TGG 0.715256 6_1:-100466450 None:intergenic
TCATCAGCTAGATCCAGCGG+CGG 0.721714 6_1:-100466676 None:intergenic
TTGACATGCCTGAGAAACAG+TGG 0.733828 6_1:-100466590 None:intergenic
TTGGTCATAAATGCAAACCG+TGG 0.747348 6_1:-100465485 None:intergenic
ACATGCCTGAGAAACAGTGG+TGG 0.787622 6_1:-100466587 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTTTTTTATTTTA+TGG + chr6_1:100461250-100461269 Msa0902330:intron 0.0%
!! ATATATATATATATATATAT+GGG - chr6_1:100463252-100463271 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr6_1:100463253-100463272 None:intergenic 0.0%
!! TATATATATATATATATATA+AGG + chr6_1:100463253-100463272 Msa0902330:intron 0.0%
!!! TTTTTTTAAGTAAACTTTTT+CGG + chr6_1:100459066-100459085 Msa0902330:intron 10.0%
!! ATTGTCAAAAAATAAAATAA+GGG + chr6_1:100459751-100459770 Msa0902330:intron 10.0%
!! TATTATATAAATAAAGGAAA+AGG + chr6_1:100459983-100460002 Msa0902330:intron 10.0%
!!! TTATTTTATTATTGAGTAAA+TGG + chr6_1:100460100-100460119 Msa0902330:intron 10.0%
!! ATAATTTATAAAATATCTTG+TGG + chr6_1:100461592-100461611 Msa0902330:intron 10.0%
!! AATGCATAATATATATATAT+AGG + chr6_1:100463031-100463050 Msa0902330:intron 10.0%
!! ATGCATAATATATATATATA+GGG + chr6_1:100463032-100463051 Msa0902330:intron 10.0%
!!! TATTATTTTATTTTTTCTTC+TGG + chr6_1:100464107-100464126 Msa0902330:intron 10.0%
!! AAATTAAAAAAGAAAAAAGA+AGG - chr6_1:100464416-100464435 None:intergenic 10.0%
!! ATTTATAATTATTATGTACT+AGG + chr6_1:100464432-100464451 Msa0902330:intron 10.0%
!! AAATTAAAAAAGAAAAAAGA+AGG - chr6_1:100464416-100464435 None:intergenic 10.0%
!!! AATTCCATTTTATATTCATT+GGG + chr6_1:100458897-100458916 Msa0902330:intron 15.0%
!!! TTTTGTTTTTTGGTATTTTT+GGG + chr6_1:100459001-100459020 Msa0902330:intron 15.0%
!!! TATACAATTTTTAAAAAGTC+AGG + chr6_1:100459029-100459048 Msa0902330:intron 15.0%
!!! ATACAATTTTTAAAAAGTCA+GGG + chr6_1:100459030-100459049 Msa0902330:intron 15.0%
!! CATTGTCAAAAAATAAAATA+AGG + chr6_1:100459750-100459769 Msa0902330:intron 15.0%
!! CAATAATAAAATAAACTTGA+TGG - chr6_1:100460094-100460113 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr6_1:100460710-100460729 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr6_1:100460709-100460728 Msa0902330:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr6_1:100460733-100460752 Msa0902330:intron 15.0%
!! ATATTAATGCACAAAAAATA+TGG - chr6_1:100461619-100461638 None:intergenic 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr6_1:100461765-100461784 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr6_1:100461766-100461785 None:intergenic 15.0%
!!! GTTTTTTGTTTTTGATAATA+TGG + chr6_1:100461911-100461930 Msa0902330:intron 15.0%
!!! TTTACTTTTTGATTGAATTT+TGG - chr6_1:100462194-100462213 None:intergenic 15.0%
!! TTAATTCCATTTATATTCAT+CGG + chr6_1:100462866-100462885 Msa0902330:intron 15.0%
!!! TTTTTAAAAAGTCTTAATGA+TGG + chr6_1:100462983-100463002 Msa0902330:intron 15.0%
!! ATATATATATATATAAGGTC+CGG + chr6_1:100463258-100463277 Msa0902330:intron 15.0%
!! ATAATGCAAATCATAAATAA+CGG - chr6_1:100463392-100463411 None:intergenic 15.0%
!! AAAGTTGGATTATTTAATTA+AGG + chr6_1:100463439-100463458 Msa0902330:intron 15.0%
!!! ACTAAAAAGACTTTTATTTT+TGG - chr6_1:100464047-100464066 None:intergenic 15.0%
!!! AATAAAAGTCTTTTTAGTTT+TGG + chr6_1:100464049-100464068 Msa0902330:intron 15.0%
!!! ATAAAAGTCTTTTTAGTTTT+GGG + chr6_1:100464050-100464069 Msa0902330:intron 15.0%
!!! ATTTTTACATTAGATTGAAT+AGG + chr6_1:100464173-100464192 Msa0902330:intron 15.0%
!!! GTCTTCAAAAAATTATTTTA+GGG - chr6_1:100464531-100464550 None:intergenic 15.0%
!! ATGTCAAAAACATAAAAATA+AGG - chr6_1:100464646-100464665 None:intergenic 15.0%
!! TTCTGTTAATAAGTTATTAA+TGG - chr6_1:100464683-100464702 None:intergenic 15.0%
!!! TGTTTTTTTACTTGTATTTA+GGG + chr6_1:100465923-100465942 Msa0902330:intron 15.0%
!!! ATATAAATAACTTGTTCTAA+AGG - chr6_1:100466820-100466839 None:intergenic 15.0%
!!! GAATTCCATTTTATATTCAT+TGG + chr6_1:100458896-100458915 Msa0902330:intron 20.0%
!! AGGAAAAATAAAATCTATCT+CGG - chr6_1:100458980-100458999 None:intergenic 20.0%
!!! ATTTTTCCTCTTTTGTTTTT+TGG + chr6_1:100458991-100459010 Msa0902330:intron 20.0%
!! AAAATACCAAAAAACAAAAG+AGG - chr6_1:100459000-100459019 None:intergenic 20.0%
!!! CTTTTGTTTTTTGGTATTTT+TGG + chr6_1:100459000-100459019 Msa0902330:intron 20.0%
!!! TACAAAGTTTTGATTACAAT+TGG + chr6_1:100459240-100459259 Msa0902330:intron 20.0%
!!! ACAAAGTTTTGATTACAATT+GGG + chr6_1:100459241-100459260 Msa0902330:intron 20.0%
!!! CAATTGGGATATTTTAATTA+AGG + chr6_1:100459256-100459275 Msa0902330:intron 20.0%
!! ATATTGCATATTCAAATTTG+TGG - chr6_1:100459339-100459358 None:intergenic 20.0%
!! ATTTGTGTAATACTATGAAT+AGG + chr6_1:100459411-100459430 Msa0902330:intron 20.0%
!! AAACATCAAATAAAAAGGAA+TGG - chr6_1:100459841-100459860 None:intergenic 20.0%
!! AGCTAAAACATCAAATAAAA+AGG - chr6_1:100459836-100459855 None:intergenic 20.0%
!!! ATTTGATGTTTTAGAATTGT+TGG + chr6_1:100459601-100459620 Msa0902330:intron 20.0%
!! TTATCACAATTGTCAAAAAT+TGG + chr6_1:100459678-100459697 Msa0902330:intron 20.0%
!! AATGAAAATAGTTGTAGATT+TGG - chr6_1:100459786-100459805 None:intergenic 20.0%
!! AGCTAAAACATCAAATAAAA+AGG + chr6_1:100459836-100459855 Msa0902330:intron 20.0%
!! AAACATCAAATAAAAAGGAA+TGG + chr6_1:100459841-100459860 Msa0902330:intron 20.0%
!! ACTTTGAGTATCAATAATTT+CGG + chr6_1:100459881-100459900 Msa0902330:intron 20.0%
!! GAAATCTTCTCTTTAATAAA+CGG + chr6_1:100460007-100460026 Msa0902330:intron 20.0%
!!! TTAACATAAGTTTTTAACGT+CGG - chr6_1:100460230-100460249 None:intergenic 20.0%
!!! GAGATTTGATATTCAATTTT+GGG - chr6_1:100460362-100460381 None:intergenic 20.0%
!!! AGAGATTTGATATTCAATTT+TGG - chr6_1:100460363-100460382 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr6_1:100460719-100460738 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr6_1:100460796-100460815 Msa0902330:intron 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG - chr6_1:100460996-100461015 None:intergenic 20.0%
!!! AACTATTAAAAGTTTCGTTT+TGG - chr6_1:100461023-100461042 None:intergenic 20.0%
!!! AACGAAACTTTTAATAGTTA+AGG + chr6_1:100461024-100461043 Msa0902330:intron 20.0%
!!! ACGAAACTTTTAATAGTTAA+GGG + chr6_1:100461025-100461044 Msa0902330:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG - chr6_1:100461083-100461102 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG + chr6_1:100461084-100461103 Msa0902330:intron 20.0%
!! TTGAAAAAAAATAAAAGGAG+AGG - chr6_1:100461572-100461591 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - chr6_1:100461696-100461715 None:intergenic 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG - chr6_1:100461732-100461751 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - chr6_1:100461733-100461752 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG - chr6_1:100461806-100461825 None:intergenic 20.0%
!!! AAGAAAAGTGTATAAATGAA+GGG - chr6_1:100461830-100461849 None:intergenic 20.0%
!!! TAAGAAAAGTGTATAAATGA+AGG - chr6_1:100461831-100461850 None:intergenic 20.0%
!! TCAAAAAGTAAAGTATAATC+CGG + chr6_1:100462202-100462221 Msa0902330:intron 20.0%
!!! GTTTTATTCTTAAATTGCTT+CGG + chr6_1:100462283-100462302 Msa0902330:intron 20.0%
!! TAATTCCATTTATATTCATC+GGG + chr6_1:100462867-100462886 Msa0902330:intron 20.0%
!!! ACTTTTTTTTTTATGGTAAC+CGG - chr6_1:100463294-100463313 None:intergenic 20.0%
!! TACCATAAAAAAAAAAGTCA+TGG + chr6_1:100463296-100463315 Msa0902330:intron 20.0%
!!! AACCATGACTTTTTTTTTTA+TGG - chr6_1:100463301-100463320 None:intergenic 20.0%
!! AAAAAGTCATGGTTAAAAAA+AGG + chr6_1:100463307-100463326 Msa0902330:intron 20.0%
!!! TTTTTTTCAAGTAACCTTTT+CGG + chr6_1:100463337-100463356 Msa0902330:intron 20.0%
!!! GTTTTCATTTTGATTAAAGT+TGG + chr6_1:100463424-100463443 Msa0902330:intron 20.0%
!! CAACAATTTCTTTATTAGAT+CGG + chr6_1:100463848-100463867 Msa0902330:intron 20.0%
!!! TTCCCTAAAATAATTTTTTG+AGG + chr6_1:100464344-100464363 Msa0902330:intron 20.0%
!!! GTCCTCAAAAAATTATTTTA+GGG - chr6_1:100464349-100464368 None:intergenic 20.0%
!!! GGTCTTCAAAAAATTATTTT+AGG - chr6_1:100464532-100464551 None:intergenic 20.0%
!! AGAAGATATGATAATTGATA+TGG + chr6_1:100464699-100464718 Msa0902330:intron 20.0%
!!! TATAGACCAAATTTTACTTA+GGG - chr6_1:100465180-100465199 None:intergenic 20.0%
!!! TTATAGACCAAATTTTACTT+AGG - chr6_1:100465181-100465200 None:intergenic 20.0%
!! ATTGATGAAAGAATAATCAA+AGG - chr6_1:100465619-100465638 None:intergenic 20.0%
!!! CTTTAAGACAATGAATTTAT+GGG - chr6_1:100465782-100465801 None:intergenic 20.0%
!!! ACTTTAAGACAATGAATTTA+TGG - chr6_1:100465783-100465802 None:intergenic 20.0%
!!! AATTCATTGTCTTAAAGTTT+TGG + chr6_1:100465785-100465804 Msa0902330:intron 20.0%
!!! ATTCATTGTCTTAAAGTTTT+GGG + chr6_1:100465786-100465805 Msa0902330:intron 20.0%
!!! GTGTTTTTTTACTTGTATTT+AGG + chr6_1:100465922-100465941 Msa0902330:intron 20.0%
!! AAAATGTAACCAAAGTTTAT+TGG - chr6_1:100466229-100466248 None:intergenic 20.0%
!! TCCATCAGAATATATAATTA+GGG - chr6_1:100466311-100466330 None:intergenic 20.0%
!! ATCCATCAGAATATATAATT+AGG - chr6_1:100466312-100466331 None:intergenic 20.0%
!! ATGTAGTTATAACAATTGTT+GGG - chr6_1:100466423-100466442 None:intergenic 20.0%
!! TATGTAGTTATAACAATTGT+TGG - chr6_1:100466424-100466443 None:intergenic 20.0%
!! ATTGTTATAACTACATATGA+AGG + chr6_1:100466427-100466446 Msa0902330:CDS 20.0%
!!! TAGAAAACAAATGGATTTTC+TGG - chr6_1:100458376-100458395 None:intergenic 25.0%
! AGAAAAAATTCATCAACTCA+CGG - chr6_1:100458787-100458806 None:intergenic 25.0%
!! AACTTTCTACTATTTTGTGT+GGG + chr6_1:100458819-100458838 Msa0902330:intron 25.0%
!! CATTTTATATTCATTGGGAT+CGG + chr6_1:100458902-100458921 Msa0902330:intron 25.0%
! ATGAAAGTCAGATATAAAGT+GGG + chr6_1:100459279-100459298 Msa0902330:intron 25.0%
! ATCAAATAAAAAGGAATGGA+GGG - chr6_1:100459845-100459864 None:intergenic 25.0%
! AACGTAATTAATTGTGACAA+GGG - chr6_1:100459646-100459665 None:intergenic 25.0%
! TAACGTAATTAATTGTGACA+AGG - chr6_1:100459647-100459666 None:intergenic 25.0%
!!! TTTTTTGACAATGAGACTTA+GGG - chr6_1:100459743-100459762 None:intergenic 25.0%
!!! ATTTTTTGACAATGAGACTT+AGG - chr6_1:100459744-100459763 None:intergenic 25.0%
! ATCAAATAAAAAGGAATGGA+GGG + chr6_1:100459845-100459864 Msa0902330:intron 25.0%
! AATAAACCCTCTTCAATAAA+CGG + chr6_1:100459941-100459960 Msa0902330:intron 25.0%
! AAAAAACCGTTTATTGAAGA+GGG - chr6_1:100459950-100459969 None:intergenic 25.0%
! AAAAAAACCGTTTATTGAAG+AGG - chr6_1:100459951-100459970 None:intergenic 25.0%
!! AGCTCATATTATTTAGTCTT+TGG + chr6_1:100460037-100460056 Msa0902330:intron 25.0%
!! GCTCATATTATTTAGTCTTT+GGG + chr6_1:100460038-100460057 Msa0902330:intron 25.0%
!! ATATTATTTAGTCTTTGGGT+CGG + chr6_1:100460042-100460061 Msa0902330:intron 25.0%
! AAAACTTATGTTAACTGATG+AGG + chr6_1:100460236-100460255 Msa0902330:intron 25.0%
!!! GATATTGATTTTTCAGTTCA+AGG - chr6_1:100460340-100460359 None:intergenic 25.0%
! ACTACAATGAAAGTAGAAAA+TGG - chr6_1:100460476-100460495 None:intergenic 25.0%
!!! ACAAATTTTTTGTGCTAACT+AGG - chr6_1:100460519-100460538 None:intergenic 25.0%
! AATGATTAAGAGAAAGAGAA+TGG + chr6_1:100460676-100460695 Msa0902330:intron 25.0%
!!! CATTTTGAAACAATTCGTTT+TGG + chr6_1:100460836-100460855 Msa0902330:intron 25.0%
! CGAAACCAAAAAATAAGTTA+AGG - chr6_1:100460995-100461014 None:intergenic 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG + chr6_1:100460867-100460886 Msa0902330:intron 25.0%
! GATGAATGTATTAGAGTTAA+GGG - chr6_1:100460894-100460913 None:intergenic 25.0%
!!! ACTTATTTTTGGTTTCGTTT+TGG - chr6_1:100460962-100460981 None:intergenic 25.0%
! ACGAAACCAAAAATAAGTTA+AGG + chr6_1:100460964-100460983 Msa0902330:intron 25.0%
! CGAAACCAAAAATAAGTTAA+GGG + chr6_1:100460965-100460984 Msa0902330:intron 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG - chr6_1:100460867-100460886 None:intergenic 25.0%
!!! TGGTCACTTAACTTATTTTT+TGG - chr6_1:100461003-100461022 None:intergenic 25.0%
! GAAACCAAAAAGTAACTTAA+GGG + chr6_1:100461056-100461075 Msa0902330:intron 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG - chr6_1:100461111-100461130 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG + chr6_1:100461114-100461133 Msa0902330:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG + chr6_1:100461115-100461134 Msa0902330:intron 25.0%
! GTCAAGAAATCATTTAAATG+TGG - chr6_1:100461159-100461178 None:intergenic 25.0%
!!! CAAATACAGCTTTTTAGTTT+TGG + chr6_1:100461191-100461210 Msa0902330:intron 25.0%
! AAAAATAAAAAAGCTGCAAG+TGG - chr6_1:100461235-100461254 None:intergenic 25.0%
! TGTGTAAAAATGACTAAATG+AGG - chr6_1:100461308-100461327 None:intergenic 25.0%
! GCTCATAATTATTATGTACT+AGG + chr6_1:100461441-100461460 Msa0902330:intron 25.0%
!! AAACACGCAAACATTATTTT+AGG - chr6_1:100461533-100461552 None:intergenic 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - chr6_1:100461697-100461716 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr6_1:100461807-100461826 None:intergenic 25.0%
!! AGAAAAGTGTATAAATGAAG+GGG - chr6_1:100461829-100461848 None:intergenic 25.0%
! GTAAGCATTATGATATACTA+TGG + chr6_1:100461946-100461965 Msa0902330:intron 25.0%
! ATATGAGCCACATTATATTT+GGG - chr6_1:100462006-100462025 None:intergenic 25.0%
! AATATGAGCCACATTATATT+TGG - chr6_1:100462007-100462026 None:intergenic 25.0%
! TTGTTGAAAGAATAATTGAC+CGG - chr6_1:100462224-100462243 None:intergenic 25.0%
!! AGTTGTGATATCTGATTTTA+AGG - chr6_1:100462368-100462387 None:intergenic 25.0%
!! TTTCAACTTTCTATTTTCTG+TGG + chr6_1:100462716-100462735 Msa0902330:intron 25.0%
!! TTCAACTTTCTATTTTCTGT+GGG + chr6_1:100462717-100462736 Msa0902330:intron 25.0%
! GTAATTAACATGAAATTGTG+AGG + chr6_1:100462748-100462767 Msa0902330:intron 25.0%
! CGATTTAGATATGATTGATA+TGG - chr6_1:100462802-100462821 None:intergenic 25.0%
! TCTATGATTATGTTCTGTTT+GGG - chr6_1:100462944-100462963 None:intergenic 25.0%
! ATCTATGATTATGTTCTGTT+TGG - chr6_1:100462945-100462964 None:intergenic 25.0%
! ATGAAATCCAGATAAAAAGT+AGG + chr6_1:100463462-100463481 Msa0902330:intron 25.0%
! TGAATATGCAAGTGAAAATA+AGG - chr6_1:100463688-100463707 None:intergenic 25.0%
! ATAAAGAAATTGTTGATCCT+TGG - chr6_1:100463843-100463862 None:intergenic 25.0%
!! AGATCGGTTTATACATAATT+TGG + chr6_1:100463864-100463883 Msa0902330:intron 25.0%
! GGTTTATACATAATTTGGTT+TGG + chr6_1:100463869-100463888 Msa0902330:intron 25.0%
! TAAAATAATAAAGCTGCAAG+TGG - chr6_1:100464097-100464116 None:intergenic 25.0%
! GCTCATAATTATTATGTACT+AGG + chr6_1:100461441-100461460 Msa0902330:intron 25.0%
!! GGTCCTCAAAAAATTATTTT+AGG - chr6_1:100464350-100464369 None:intergenic 25.0%
!!! AACACGCAAACATTATTTTA+GGG - chr6_1:100461532-100461551 None:intergenic 25.0%
!! AAACACGCAAACATTATTTT+AGG - chr6_1:100461533-100461552 None:intergenic 25.0%
!!! GTTTGCGTGTTTTAATTTTA+AGG + chr6_1:100464380-100464399 Msa0902330:intron 25.0%
! AAAAAAGAAAAAAGAAGGAG+AGG - chr6_1:100464411-100464430 None:intergenic 25.0%
!!! AACACGCAAACATTATTTTA+GGG - chr6_1:100461532-100461551 None:intergenic 25.0%
!! AAACACGCAAACATTATTTT+AGG - chr6_1:100461533-100461552 None:intergenic 25.0%
!!! GTTTGCGTGTTTTAATTTTA+AGG + chr6_1:100464380-100464399 Msa0902330:intron 25.0%
! AAAAAAGAAAAAAGAAGGAG+AGG - chr6_1:100464411-100464430 None:intergenic 25.0%
!! TAGGAGTATATAAAATTGTG+CGG + chr6_1:100464619-100464638 Msa0902330:intron 25.0%
!!! TTTGAAAGCATTATGATGTA+TGG + chr6_1:100464732-100464751 Msa0902330:intron 25.0%
! AATACATTCAGTAGAAATCA+AGG + chr6_1:100464892-100464911 Msa0902330:intron 25.0%
! ATACATTCAGTAGAAATCAA+GGG + chr6_1:100464893-100464912 Msa0902330:intron 25.0%
! AGAAATAATGTTGAGTCTAT+TGG + chr6_1:100464980-100464999 Msa0902330:intron 25.0%
! GATTATCCTAACTAAAATTG+AGG + chr6_1:100465083-100465102 Msa0902330:intron 25.0%
! CTCTTCTAATACTTAAAGAA+CGG + chr6_1:100465154-100465173 Msa0902330:intron 25.0%
! GCATGTACATATTCTATATT+GGG - chr6_1:100465245-100465264 None:intergenic 25.0%
! AGCATGTACATATTCTATAT+TGG - chr6_1:100465246-100465265 None:intergenic 25.0%
! ACACAGAAATTTCTTAAACT+TGG + chr6_1:100465324-100465343 Msa0902330:intron 25.0%
! TTAAAAATAGTTCATTCCCT+AGG + chr6_1:100465567-100465586 Msa0902330:CDS 25.0%
!! TTGCTAATATTTTGTTACGT+AGG - chr6_1:100465671-100465690 None:intergenic 25.0%
! ATTTCGTTCAAATTTGTGTT+GGG - chr6_1:100465895-100465914 None:intergenic 25.0%
! TATTTCGTTCAAATTTGTGT+TGG - chr6_1:100465896-100465915 None:intergenic 25.0%
!!! ATTTAGGGTTTTTTTTCACT+TGG + chr6_1:100465938-100465957 Msa0902330:intron 25.0%
!!! GATTCATTCTCTTTTTTCAA+GGG + chr6_1:100465984-100466003 Msa0902330:intron 25.0%
!!! TTTTTCAAGGGTTTCATAAT+TGG + chr6_1:100465996-100466015 Msa0902330:intron 25.0%
! ATTAAACCCATTTCATATGA+TGG + chr6_1:100466021-100466040 Msa0902330:intron 25.0%
! TTAAACCCATTTCATATGAT+GGG + chr6_1:100466022-100466041 Msa0902330:intron 25.0%
! GAAAATAGGTTATTTGAAGA+TGG + chr6_1:100466100-100466119 Msa0902330:intron 25.0%
!!! TTGCTTTTTCCAATAAACTT+TGG + chr6_1:100466217-100466236 Msa0902330:intron 25.0%
!!! ATATTAATTTGTCTTGTTGC+AGG + chr6_1:100466332-100466351 Msa0902330:intron 25.0%
CTTTATGAAACGTTTGAAAG+CGG - chr6_1:100458263-100458282 None:intergenic 30.0%
TAGATTATTGTGAGAAGGAA+GGG - chr6_1:100458302-100458321 None:intergenic 30.0%
GGAAGTTCATAGAAAACAAA+TGG - chr6_1:100458385-100458404 None:intergenic 30.0%
AAATCTGAAAGTGATTCTGA+TGG - chr6_1:100458423-100458442 None:intergenic 30.0%
! CAACTTTCTACTATTTTGTG+TGG + chr6_1:100458818-100458837 Msa0902330:intron 30.0%
! ACTTTCTACTATTTTGTGTG+GGG + chr6_1:100458820-100458839 Msa0902330:intron 30.0%
GTAATTAACGTGAAATTGTG+AGG + chr6_1:100458850-100458869 Msa0902330:intron 30.0%
CGATCCCAATGAATATAAAA+TGG - chr6_1:100458904-100458923 None:intergenic 30.0%
GAAGAAGATTCCTAAATGTA+CGG - chr6_1:100458941-100458960 None:intergenic 30.0%
AAAGCAGAAAGAGATTTAGA+TGG - chr6_1:100459153-100459172 None:intergenic 30.0%
GATGAAAGTCAGATATAAAG+TGG + chr6_1:100459278-100459297 Msa0902330:intron 30.0%
AGATATAAAGTGGGATGAAA+AGG + chr6_1:100459288-100459307 Msa0902330:intron 30.0%
GATATAAAGTGGGATGAAAA+GGG + chr6_1:100459289-100459308 Msa0902330:intron 30.0%
CATATTCAAATTTGTGGTAG+TGG - chr6_1:100459333-100459352 None:intergenic 30.0%
AAACCTTGGAAAGTGAAATT+TGG - chr6_1:100459478-100459497 None:intergenic 30.0%
CATCAAATAAAAAGGAATGG+AGG - chr6_1:100459844-100459863 None:intergenic 30.0%
AATTGTGACAAGGGTAAAAT+TGG - chr6_1:100459637-100459656 None:intergenic 30.0%
AGCTGATTACACACATATTA+AGG - chr6_1:100459820-100459839 None:intergenic 30.0%
CATCAAATAAAAAGGAATGG+AGG + chr6_1:100459844-100459863 Msa0902330:intron 30.0%
AGGAATTTGAGGATTGAATT+CGG - chr6_1:100460391-100460410 None:intergenic 30.0%
! GTTTGAGATTTAGGAATTTG+AGG - chr6_1:100460402-100460421 None:intergenic 30.0%
AAACCCCTAAGATTCAATTT+GGG + chr6_1:100460418-100460437 Msa0902330:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr6_1:100460627-100460646 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr6_1:100460628-100460647 Msa0902330:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG + chr6_1:100460856-100460875 Msa0902330:intron 30.0%
GGATGAATGTATTAGAGTTA+AGG - chr6_1:100460895-100460914 None:intergenic 30.0%
!! TTGGTCCCTTAACTTATTTT+TGG - chr6_1:100460855-100460874 None:intergenic 30.0%
!!! GTTACTTTTTGGTTTCGTTT+TGG - chr6_1:100461052-100461071 None:intergenic 30.0%
CGAAACCAAAAAGTAACTTA+AGG + chr6_1:100461055-100461074 Msa0902330:intron 30.0%
ATGTGGCTTAATTAATGATC+TGG - chr6_1:100461142-100461161 None:intergenic 30.0%
TTTGAACTTTAAACTGCAAG+TGG - chr6_1:100461279-100461298 None:intergenic 30.0%
AGAGTTTCTTTCTACTTTCT+TGG + chr6_1:100461342-100461361 Msa0902330:intron 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG - chr6_1:100461718-100461737 None:intergenic 30.0%
! TTGAAATGGGTCAGTTATTT+TGG - chr6_1:100461719-100461738 None:intergenic 30.0%
! GCAGAAATAATACTGTCTTT+TGG + chr6_1:100461980-100461999 Msa0902330:intron 30.0%
!! GATTAGCCTAACTAAAATTG+AGG + chr6_1:100462066-100462085 Msa0902330:intron 30.0%
TCTCCACATATACTTAAGAA+GGG + chr6_1:100462158-100462177 Msa0902330:intron 30.0%
ACATAGAAATTTCCTAAACC+TGG + chr6_1:100462341-100462360 Msa0902330:intron 30.0%
AAGAAAAGTTCATCAACTCA+CGG - chr6_1:100462690-100462709 None:intergenic 30.0%
! TCAACTTTCTATTTTCTGTG+GGG + chr6_1:100462718-100462737 Msa0902330:intron 30.0%
! ATCTAAATCGAATCAAGTTG+AGG + chr6_1:100462812-100462831 Msa0902330:intron 30.0%
GAAGAAGATTCGTAATTGTA+CGG - chr6_1:100462922-100462941 None:intergenic 30.0%
ACACCTTCATAAAAAGTAGT+TGG + chr6_1:100463067-100463086 Msa0902330:intron 30.0%
!!! ACACCAACTACTTTTTATGA+AGG - chr6_1:100463162-100463181 None:intergenic 30.0%
ATAAAAGACACCTTCACAAA+AGG + chr6_1:100463211-100463230 Msa0902330:intron 30.0%
!!! TTCTCATCCTACTTTTTATC+TGG - chr6_1:100463472-100463491 None:intergenic 30.0%
GATAAAAAGTAGGATGAGAA+AGG + chr6_1:100463472-100463491 Msa0902330:intron 30.0%
AATGTTGCAAGTTCAAATTG+AGG - chr6_1:100463522-100463541 None:intergenic 30.0%
CAAATGCATTTGTATGATTG+TGG + chr6_1:100463633-100463652 Msa0902330:intron 30.0%
TGATTGTGGAATATTGTGAT+AGG + chr6_1:100463647-100463666 Msa0902330:intron 30.0%
CAAATGCATTTGTATGATTG+TGG + chr6_1:100463633-100463652 Msa0902330:intron 30.0%
TCTATGATTTCAATCATCCA+AGG + chr6_1:100463823-100463842 Msa0902330:intron 30.0%
GTTTCTACTTTCTACTTTCT+TGG + chr6_1:100464201-100464220 Msa0902330:intron 30.0%
GAGCATAAAGTGCATATTAA+TGG - chr6_1:100464234-100464253 None:intergenic 30.0%
!!! TGCGTGTTTTAATTTTAAGG+CGG + chr6_1:100464383-100464402 Msa0902330:intron 30.0%
!!! TGCGTGTTTTAATTTTAAGG+CGG + chr6_1:100464383-100464402 Msa0902330:intron 30.0%
GGATAACTAGCATTATTCTA+TGG + chr6_1:100464945-100464964 Msa0902330:intron 30.0%
ATGAGCCACATTATATAGTT+GGG - chr6_1:100465006-100465025 None:intergenic 30.0%
TATGAGCCACATTATATAGT+TGG - chr6_1:100465007-100465026 None:intergenic 30.0%
!!! TAAGAGCCTCAATTTTAGTT+AGG - chr6_1:100465092-100465111 None:intergenic 30.0%
!! ATGCTTCCTTTTGTTTGATA+TGG + chr6_1:100465261-100465280 Msa0902330:intron 30.0%
!!! TTGTCAGTGACATTTTTTGT+AGG + chr6_1:100465423-100465442 Msa0902330:intron 30.0%
TAGGAACAAAAGTAAGAAGA+AGG + chr6_1:100465442-100465461 Msa0902330:intron 30.0%
AGGAACAAAAGTAAGAAGAA+GGG + chr6_1:100465443-100465462 Msa0902330:intron 30.0%
GTGAGTTATATGTCTCAAAT+CGG + chr6_1:100465730-100465749 Msa0902330:intron 30.0%
!!! GGTTTTTTTTCACTTGGTTT+TGG + chr6_1:100465944-100465963 Msa0902330:intron 30.0%
!!! CGATTCATTCTCTTTTTTCA+AGG + chr6_1:100465983-100466002 Msa0902330:intron 30.0%
AGCGGAAAAAACTTATTCAA+TGG + chr6_1:100466162-100466181 Msa0902330:intron 30.0%
! TTGTAGCAGTAACTGATTTA+TGG + chr6_1:100466259-100466278 Msa0902330:intron 30.0%
ATATAATTAGGGCAAGTTAC+TGG - chr6_1:100466300-100466319 None:intergenic 30.0%
GCCCTAATTATATATTCTGA+TGG + chr6_1:100466307-100466326 Msa0902330:intron 30.0%
! AGTCATGAATCTTCTTTTAC+TGG + chr6_1:100466496-100466515 Msa0902330:CDS 30.0%
!! TAATAGAATTGAGGCATTGT+AGG - chr6_1:100466532-100466551 None:intergenic 30.0%
TGAACAGGATAATAGAATTG+AGG - chr6_1:100466541-100466560 None:intergenic 30.0%
GTAGATTATTGTGAGAAGGA+AGG - chr6_1:100458303-100458322 None:intergenic 35.0%
AGAGAGAGAGAGAGATATTA+GGG - chr6_1:100458333-100458352 None:intergenic 35.0%
!! TGATGGAGAAATGGATTTTG+TGG - chr6_1:100458406-100458425 None:intergenic 35.0%
AAGTGATTCTGATGGAGAAA+TGG - chr6_1:100458415-100458434 None:intergenic 35.0%
TTTCACTCGTAATCCATGTA+TGG + chr6_1:100458480-100458499 Msa0902330:exon 35.0%
TCAAACAGGTTCAACTGAAA+CGG + chr6_1:100458645-100458664 Msa0902330:CDS 35.0%
! TCATCAACTCACGGTATTTT+CGG - chr6_1:100458778-100458797 None:intergenic 35.0%
TGAAATTGTGAGGACGAAAA+TGG + chr6_1:100458860-100458879 Msa0902330:intron 35.0%
AAATCCATGTCCGTACATTT+AGG + chr6_1:100458928-100458947 Msa0902330:intron 35.0%
TCTCGGATTATGTTCTGTTT+GGG - chr6_1:100458963-100458982 None:intergenic 35.0%
ATCTCGGATTATGTTCTGTT+TGG - chr6_1:100458964-100458983 None:intergenic 35.0%
!! GTGAAATTTGGTAGTGAAGA+TGG - chr6_1:100459466-100459485 None:intergenic 35.0%
CTACCAAATTTCACTTTCCA+AGG + chr6_1:100459472-100459491 Msa0902330:intron 35.0%
TCACTTTCCAAGGTTTGATT+TGG + chr6_1:100459482-100459501 Msa0902330:intron 35.0%
ATTACCAATTGTCCTTACCT+AGG + chr6_1:100459708-100459727 Msa0902330:intron 35.0%
GGAATTTGAGGATTGAATTC+GGG - chr6_1:100460390-100460409 None:intergenic 35.0%
! ATCTTAGGGGTTTGAGATTT+AGG - chr6_1:100460411-100460430 None:intergenic 35.0%
CAAACCCCTAAGATTCAATT+TGG + chr6_1:100460417-100460436 Msa0902330:intron 35.0%
AACCCCTAAGATTCAATTTG+GGG + chr6_1:100460419-100460438 Msa0902330:intron 35.0%
TACCCCCAAATTGAATCTTA+GGG - chr6_1:100460425-100460444 None:intergenic 35.0%
ATACCCCCAAATTGAATCTT+AGG - chr6_1:100460426-100460445 None:intergenic 35.0%
!!! GGGTATTGATTTTCGATCTA+GGG + chr6_1:100460440-100460459 Msa0902330:intron 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + chr6_1:100460758-100460777 Msa0902330:intron 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr6_1:100460762-100460781 Msa0902330:intron 35.0%
ATACATTCATCCTAACGTAG+AGG + chr6_1:100460903-100460922 Msa0902330:intron 35.0%
!!! TGGTCCCTTAAGTTACTTTT+TGG - chr6_1:100461063-100461082 None:intergenic 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - chr6_1:100461122-100461141 None:intergenic 35.0%
TAGTGTATTGCATACTAGCT+AGG - chr6_1:100461467-100461486 None:intergenic 35.0%
AGGAAAAGAAGCAATATGTC+TGG - chr6_1:100461513-100461532 None:intergenic 35.0%
! GTTTGCGTGTTTTCATTGTA+AGG + chr6_1:100461541-100461560 Msa0902330:intron 35.0%
AGAAAATGGGTCAGTTATTC+CGG - chr6_1:100461683-100461702 None:intergenic 35.0%
TGTATAAATGAAGGGGAAAG+TGG - chr6_1:100461822-100461841 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG + chr6_1:100461852-100461871 Msa0902330:intron 35.0%
CCAAAGTAGGTCAATTATAC+CGG + chr6_1:100461865-100461884 Msa0902330:intron 35.0%
CAAAGTAGGTCAATTATACC+GGG + chr6_1:100461866-100461885 Msa0902330:intron 35.0%
! CTTTTGGCCCAAATATAATG+TGG + chr6_1:100461996-100462015 Msa0902330:intron 35.0%
!!! TGAGAGCCTCAATTTTAGTT+AGG - chr6_1:100462075-100462094 None:intergenic 35.0%
CTCTCCACATATACTTAAGA+AGG + chr6_1:100462157-100462176 Msa0902330:intron 35.0%
CTCCACATATACTTAAGAAG+GGG + chr6_1:100462159-100462178 Msa0902330:intron 35.0%
AACCCCTTCTTAAGTATATG+TGG - chr6_1:100462164-100462183 None:intergenic 35.0%
! AGAAGACATGTTTGAAATCC+TGG - chr6_1:100462310-100462329 None:intergenic 35.0%
!! TGATTTTAAGGACCAGGTTT+AGG - chr6_1:100462356-100462375 None:intergenic 35.0%
!! GATATCTGATTTTAAGGACC+AGG - chr6_1:100462362-100462381 None:intergenic 35.0%
TTACTTGTAAGAAAATGCCG+AGG - chr6_1:100462586-100462605 None:intergenic 35.0%
TGAAATTGTGAGGACGAAAA+TGG + chr6_1:100458860-100458879 Msa0902330:intron 35.0%
CCATTTATATTCATCGGGAT+CGG + chr6_1:100462872-100462891 Msa0902330:intron 35.0%
! TGAGCTTAACTCAGTTGATA+AGG + chr6_1:100463006-100463025 Msa0902330:intron 35.0%
CACCTTCATAAAAAGTAGTG+TGG + chr6_1:100463068-100463087 Msa0902330:intron 35.0%
!!! CACCACACTACTTTTTATGA+AGG - chr6_1:100463073-100463092 None:intergenic 35.0%
! TTTTATCAAGTCACACCTCA+AGG + chr6_1:100463095-100463114 Msa0902330:intron 35.0%
AAAGTGAAAATCACACCTTG+AGG - chr6_1:100463113-100463132 None:intergenic 35.0%
GAAGTTTCAGAAATCCGAAA+AGG - chr6_1:100463354-100463373 None:intergenic 35.0%
CGATTGAATCCTCTAATGAA+TGG + chr6_1:100463895-100463914 Msa0902330:intron 35.0%
CCAATTTCACCATTCATTAG+AGG - chr6_1:100463907-100463926 None:intergenic 35.0%
CCTCTAATGAATGGTGAAAT+TGG + chr6_1:100463904-100463923 Msa0902330:intron 35.0%
!! AATTGGTTCCAGAGATTTTG+TGG + chr6_1:100463921-100463940 Msa0902330:intron 35.0%
CAAAAAGACCACAAAATCTC+TGG - chr6_1:100463932-100463951 None:intergenic 35.0%
! AGATTTTGTGGTCTTTTTGC+AGG + chr6_1:100463933-100463952 Msa0902330:intron 35.0%
GTTTGAACTTAATCTGCAAG+TGG - chr6_1:100464136-100464155 None:intergenic 35.0%
TGTATTGCATAGTACTAGCT+AGG - chr6_1:100464281-100464300 None:intergenic 35.0%
GAAAGAAGCAATACGTCATA+TGG - chr6_1:100464327-100464346 None:intergenic 35.0%
!!! GCGTGTTTTAATTTTAAGGC+GGG + chr6_1:100464384-100464403 Msa0902330:intron 35.0%
!!! CGTGTTTTAATTTTAAGGCG+GGG + chr6_1:100464385-100464404 Msa0902330:intron 35.0%
TGTATTGCATAGTACTAGCT+AGG - chr6_1:100464281-100464300 None:intergenic 35.0%
GAAAGAAGCAATACGTCATA+TGG - chr6_1:100464327-100464346 None:intergenic 35.0%
!!! GCGTGTTTTAATTTTAAGGC+GGG + chr6_1:100464384-100464403 Msa0902330:intron 35.0%
!!! CGTGTTTTAATTTTAAGGCG+GGG + chr6_1:100464385-100464404 Msa0902330:intron 35.0%
TTTGTTCCTTCCACAATTCA+AGG + chr6_1:100464826-100464845 Msa0902330:intron 35.0%
TTGTTCCTTCCACAATTCAA+GGG + chr6_1:100464827-100464846 Msa0902330:intron 35.0%
! AATTTCGCTAGCTTATCCAT+CGG + chr6_1:100464923-100464942 Msa0902330:intron 35.0%
AATAATGCTAGTTATCCCGA+TGG - chr6_1:100464942-100464961 None:intergenic 35.0%
!! GACTCAACATTATTTCTGCA+CGG - chr6_1:100464977-100464996 None:intergenic 35.0%
ATTGGCCCAACTATATAATG+TGG + chr6_1:100464998-100465017 Msa0902330:intron 35.0%
GAAGACATGTTTGAAAATGC+TGG - chr6_1:100465288-100465307 None:intergenic 35.0%
ATCTTATAGCTGTGTATGCT+TGG + chr6_1:100465381-100465400 Msa0902330:intron 35.0%
GGAACAAAAGTAAGAAGAAG+GGG + chr6_1:100465444-100465463 Msa0902330:intron 35.0%
AAGATGATCAACTTCACTCT+TGG - chr6_1:100465507-100465526 None:intergenic 35.0%
! GAGAAGTATGTGTAAACCTA+GGG - chr6_1:100465586-100465605 None:intergenic 35.0%
! TGAGAAGTATGTGTAAACCT+AGG - chr6_1:100465587-100465606 None:intergenic 35.0%
! AGCAAAAGCGTACATCTATT+AGG + chr6_1:100465686-100465705 Msa0902330:intron 35.0%
TCTCAAATCGGATAGAAAAG+TGG + chr6_1:100465742-100465761 Msa0902330:intron 35.0%
AGAAAAGTGGAGTAAGTAAG+AGG + chr6_1:100465755-100465774 Msa0902330:intron 35.0%
CAACTCCCATCATATGAAAT+GGG - chr6_1:100466030-100466049 None:intergenic 35.0%
! ATGGTGCTAGTGTAGAAAAT+AGG + chr6_1:100466086-100466105 Msa0902330:intron 35.0%
AGGTTATTTGAAGATGGTGA+CGG + chr6_1:100466106-100466125 Msa0902330:intron 35.0%
!!! AAGTTTTTTCCGCTTGAGTT+GGG - chr6_1:100466156-100466175 None:intergenic 35.0%
!!! TAAGTTTTTTCCGCTTGAGT+TGG - chr6_1:100466157-100466176 None:intergenic 35.0%
AAAAGCAACCCCAAAGATTT+GGG - chr6_1:100466205-100466224 None:intergenic 35.0%
AAAAAGCAACCCCAAAGATT+TGG - chr6_1:100466206-100466225 None:intergenic 35.0%
GTGCACAAATAGTAAATGCA+CGG + chr6_1:100466366-100466385 Msa0902330:CDS 35.0%
TAAATGCACGGTGAAGAAAA+GGG + chr6_1:100466378-100466397 Msa0902330:CDS 35.0%
GGGATGAGAGAAATATTTGA+TGG + chr6_1:100466740-100466759 Msa0902330:CDS 35.0%
GTGCGTAGATTATTGTGAGA+AGG - chr6_1:100458307-100458326 None:intergenic 40.0%
GAGAGAGAGAGAGAGATATT+AGG - chr6_1:100458334-100458353 None:intergenic 40.0%
CTGTCTTTCTCTTCCATACA+TGG - chr6_1:100458496-100458515 None:intergenic 40.0%
! AGTTTATCCTTGGTGGTTTC+CGG - chr6_1:100458613-100458632 None:intergenic 40.0%
TTGCAACAGTTTATCCTTGG+TGG - chr6_1:100458620-100458639 None:intergenic 40.0%
CAAGGATAAACTGTTGCAAC+CGG + chr6_1:100458621-100458640 Msa0902330:CDS 40.0%
TCAGTTGAACCTGTTTGAAC+CGG - chr6_1:100458643-100458662 None:intergenic 40.0%
! TATTTTCGGCGGTTTCTCAT+CGG - chr6_1:100458764-100458783 None:intergenic 40.0%
GATTCCTAAATGTACGGACA+TGG - chr6_1:100458935-100458954 None:intergenic 40.0%
ACAATAACAGTGGTACTCGT+GGG - chr6_1:100459108-100459127 None:intergenic 40.0%
TATTCTCGCCACAATAACAG+TGG - chr6_1:100459118-100459137 None:intergenic 40.0%
!! CTTTCCAAGGTTTGATTTGG+TGG + chr6_1:100459485-100459504 Msa0902330:intron 40.0%
ACTACCTAGGTAAGGACAAT+TGG - chr6_1:100459715-100459734 None:intergenic 40.0%
TAAAAAGGAATGGAGGGAGT+AGG + chr6_1:100459851-100459870 Msa0902330:intron 40.0%
! GTCACTTTAGTCTCTGACTT+TGG + chr6_1:100460122-100460141 Msa0902330:intron 40.0%
TGATGAGGTGACAAATGTCT+TGG + chr6_1:100460251-100460270 Msa0902330:intron 40.0%
GATGAGGTGACAAATGTCTT+GGG + chr6_1:100460252-100460271 Msa0902330:intron 40.0%
ACCCCTAAGATTCAATTTGG+GGG + chr6_1:100460420-100460439 Msa0902330:intron 40.0%
ACCCCCAAATTGAATCTTAG+GGG - chr6_1:100460424-100460443 None:intergenic 40.0%
!!! GGGGTATTGATTTTCGATCT+AGG + chr6_1:100460439-100460458 Msa0902330:intron 40.0%
!!! GACACTCATTTTGAAACGGA+TGG - chr6_1:100460623-100460642 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr6_1:100460761-100460780 Msa0902330:intron 40.0%
TTAATGACAGTGCTATCCTG+TGG - chr6_1:100461409-100461428 None:intergenic 40.0%
! CGTGTTTTCATTGTAAGGCT+GGG + chr6_1:100461546-100461565 Msa0902330:intron 40.0%
GAAAATGGGTCAGTTATTCC+GGG - chr6_1:100461682-100461701 None:intergenic 40.0%
CCGGTATAATTGACCTACTT+TGG - chr6_1:100461868-100461887 None:intergenic 40.0%
TTCTTAAATTGCTTCGGACC+AGG + chr6_1:100462289-100462308 Msa0902330:intron 40.0%
! TTGATAATTCTGACGCCAGT+TGG + chr6_1:100462499-100462518 Msa0902330:intron 40.0%
CCGATCCCGATGAATATAAA+TGG - chr6_1:100462875-100462894 None:intergenic 40.0%
! ATTTCGCTAGCTTATCCATC+GGG + chr6_1:100464924-100464943 Msa0902330:intron 40.0%
GAACGGCCCTAAGTAAAATT+TGG + chr6_1:100465171-100465190 Msa0902330:intron 40.0%
GCTGGTCCATATCAAACAAA+AGG - chr6_1:100465270-100465289 None:intergenic 40.0%
TTGGTCATAAATGCAAACCG+TGG - chr6_1:100465488-100465507 None:intergenic 40.0%
! GAGTGAAGTTGATCATCTTG+AGG + chr6_1:100465508-100465527 Msa0902330:CDS 40.0%
! GAAGTTGATCATCTTGAGGA+TGG + chr6_1:100465512-100465531 Msa0902330:CDS 40.0%
GTAGGTAGCATGCATAATCA+TGG - chr6_1:100465653-100465672 None:intergenic 40.0%
TTTGTGTTGGGTCATCATGA+GGG - chr6_1:100465883-100465902 None:intergenic 40.0%
ATTTGTGTTGGGTCATCATG+AGG - chr6_1:100465884-100465903 None:intergenic 40.0%
GCAACTCCCATCATATGAAA+TGG - chr6_1:100466031-100466050 None:intergenic 40.0%
! TTTCATATGATGGGAGTTGC+TGG + chr6_1:100466031-100466050 Msa0902330:intron 40.0%
GAACTACTATGCGCTATTCA+TGG + chr6_1:100466067-100466086 Msa0902330:intron 40.0%
! CAAAGATTTGGGACCAAAAG+CGG - chr6_1:100466194-100466213 None:intergenic 40.0%
! GCTTTTGGTCCCAAATCTTT+GGG + chr6_1:100466193-100466212 Msa0902330:intron 40.0%
! CTTTTGGTCCCAAATCTTTG+GGG + chr6_1:100466194-100466213 Msa0902330:intron 40.0%
GTAAATGCACGGTGAAGAAA+AGG + chr6_1:100466377-100466396 Msa0902330:CDS 40.0%
CAACTGTGTGATGACAATGT+TGG - chr6_1:100466453-100466472 None:intergenic 40.0%
CAACATTGTCATCACACAGT+TGG + chr6_1:100466451-100466470 Msa0902330:CDS 40.0%
TGACTAATGATTCCACTTCG+AGG - chr6_1:100466481-100466500 None:intergenic 40.0%
AACTCTGCAGGTAATTGAAC+AGG - chr6_1:100466556-100466575 None:intergenic 40.0%
TCAAACACATCATCCTCATG+AGG + chr6_1:100466609-100466628 Msa0902330:CDS 40.0%
!! ACGTTGATGATTCCAGCGAT+AGG + chr6_1:100458560-100458579 Msa0902330:CDS 45.0%
CGGTTGCAACAGTTTATCCT+TGG - chr6_1:100458623-100458642 None:intergenic 45.0%
AGGTTCAACTGAAACGGCAT+CGG + chr6_1:100458651-100458670 Msa0902330:CDS 45.0%
AATTTCTTCAAGCTCCAGCG+AGG + chr6_1:100458714-100458733 Msa0902330:CDS 45.0%
! TCAACTCACGGTATTTTCGG+CGG - chr6_1:100458775-100458794 None:intergenic 45.0%
CACAATAACAGTGGTACTCG+TGG - chr6_1:100459109-100459128 None:intergenic 45.0%
CACGAGTACCACTGTTATTG+TGG + chr6_1:100459107-100459126 Msa0902330:intron 45.0%
GTCACCACCAAATCAAACCT+TGG - chr6_1:100459492-100459511 None:intergenic 45.0%
! TTTGGACCTTGCTGTCACAA+AGG + chr6_1:100460140-100460159 Msa0902330:intron 45.0%
ACAAATGTCTTGGGCTGACA+AGG + chr6_1:100460261-100460280 Msa0902330:intron 45.0%
! AAGGTGCATGAGGTGTTAGA+GGG + chr6_1:100460280-100460299 Msa0902330:intron 45.0%
TGTGCTAACTAGGTGCATGA+GGG - chr6_1:100460509-100460528 None:intergenic 45.0%
TTGTGCTAACTAGGTGCATG+AGG - chr6_1:100460510-100460529 None:intergenic 45.0%
TAGAGGACCAAAGTGGTTGA+CGG + chr6_1:100460920-100460939 Msa0902330:intron 45.0%
GTTGACGGAGGAAGAGTTAA+GGG + chr6_1:100460935-100460954 Msa0902330:intron 45.0%
! GCGTGTTTTCATTGTAAGGC+TGG + chr6_1:100461545-100461564 Msa0902330:intron 45.0%
GTAGGTCAATTATACCGGGA+CGG + chr6_1:100461870-100461889 Msa0902330:intron 45.0%
ACGTCGACAACAACTCAAAC+TGG + chr6_1:100462466-100462485 Msa0902330:intron 45.0%
TTTGAACCGGTTGCAATACG+CGG - chr6_1:100462539-100462558 None:intergenic 45.0%
! GTATTGCAACCGGTTCAAAC+CGG + chr6_1:100462540-100462559 Msa0902330:intron 45.0%
!! TGGATCAAACCGGTTTGAAC+CGG - chr6_1:100462552-100462571 None:intergenic 45.0%
TAAGAAAATGCCGAGGTCGA+GGG - chr6_1:100462579-100462598 None:intergenic 45.0%
AATTTCTTCAAGCTCCAGCG+AGG + chr6_1:100458714-100458733 Msa0902330:CDS 45.0%
TCATCAACTCACGGTATCTC+CGG - chr6_1:100462681-100462700 None:intergenic 45.0%
TGCATAGTACTAGCTAGGCT+AGG - chr6_1:100464276-100464295 None:intergenic 45.0%
TGCATAGTACTAGCTAGGCT+AGG - chr6_1:100464276-100464295 None:intergenic 45.0%
CCGTCGAGATAAATTGCTTC+GGG - chr6_1:100464778-100464797 None:intergenic 45.0%
CCCGAAGCAATTTATCTCGA+CGG + chr6_1:100464775-100464794 Msa0902330:intron 45.0%
CCCGTCGAGATAAATTGCTT+CGG - chr6_1:100464779-100464798 None:intergenic 45.0%
CCGAAGCAATTTATCTCGAC+GGG + chr6_1:100464776-100464795 Msa0902330:intron 45.0%
TTCCTTCCACAATTCAAGGG+AGG + chr6_1:100464830-100464849 Msa0902330:intron 45.0%
TGCATGCACTACACATGATG+AGG - chr6_1:100465351-100465370 None:intergenic 45.0%
AGAAGGGGCAAAAGCGAATA+CGG + chr6_1:100465459-100465478 Msa0902330:CDS 45.0%
AAAAGCGAATACGGCAACCA+CGG + chr6_1:100465468-100465487 Msa0902330:CDS 45.0%
ATCTTGAGGATGGCTACAGA+TGG + chr6_1:100465522-100465541 Msa0902330:CDS 45.0%
! ATGGAGGAAGTATGGTCAGA+AGG + chr6_1:100465541-100465560 Msa0902330:CDS 45.0%
TTGTGTTGGGTCATCATGAG+GGG - chr6_1:100465882-100465901 None:intergenic 45.0%
ATGGGAGTTGCTGGTGTATT+GGG + chr6_1:100466040-100466059 Msa0902330:intron 45.0%
! CGCTTTTGGTCCCAAATCTT+TGG + chr6_1:100466192-100466211 Msa0902330:intron 45.0%
AGGGCAAGTTACTGGTACAA+GGG - chr6_1:100466292-100466311 None:intergenic 45.0%
TAGGGCAAGTTACTGGTACA+AGG - chr6_1:100466293-100466312 None:intergenic 45.0%
CTTGTTGCAGGAGCTACTAT+AGG + chr6_1:100466344-100466363 Msa0902330:intron 45.0%
ACAGTTGGATTTCCTCGAAG+TGG + chr6_1:100466466-100466485 Msa0902330:CDS 45.0%
GTGCAAGTGTTTAACTCTGC+AGG - chr6_1:100466568-100466587 None:intergenic 45.0%
TTGACATGCCTGAGAAACAG+TGG - chr6_1:100466593-100466612 None:intergenic 45.0%
CTAGCTGATGAAGGACTACT+TGG + chr6_1:100466688-100466707 Msa0902330:CDS 45.0%
!! CAAATATATTATATAAATAA+AGG + chr6_1:100459977-100459996 Msa0902330:intron 5.0%
!! ATTATTTGAAAAAAAATAAA+AGG - chr6_1:100461577-100461596 None:intergenic 5.0%
!!! AAAGTTTTTTTTTTTTTTTT+TGG + chr6_1:100462251-100462270 Msa0902330:intron 5.0%
!! ATAAAAAAATAAAAAAAACT+TGG - chr6_1:100463962-100463981 None:intergenic 5.0%
!!! TTTTTTCTTTTTTAATTTAT+AGG + chr6_1:100464418-100464437 Msa0902330:intron 5.0%
TGAGCTGCCAACGAACTCTT+CGG - chr6_1:100458527-100458546 None:intergenic 50.0%
AGTTCGTTGGCAGCTCAAAC+TGG + chr6_1:100458530-100458549 Msa0902330:CDS 50.0%
AGCGATAGGTTCGACCACAT+CGG + chr6_1:100458574-100458593 Msa0902330:CDS 50.0%
GTACAAGATTCCAGCCGATG+TGG - chr6_1:100458591-100458610 None:intergenic 50.0%
! CATCGGCTGGAATCTTGTAC+CGG + chr6_1:100458591-100458610 Msa0902330:CDS 50.0%
TCTTGTACCGGAAACCACCA+AGG + chr6_1:100458603-100458622 Msa0902330:CDS 50.0%
! CTGTTGCAACCGGTTCAAAC+AGG + chr6_1:100458631-100458650 Msa0902330:CDS 50.0%
!! AACTGAAACGGCATCGGTGT+CGG + chr6_1:100458657-100458676 Msa0902330:CDS 50.0%
!! ACTTAGGGAGAGCACTACCT+AGG - chr6_1:100459728-100459747 None:intergenic 50.0%
CAGAGACCTTTGTGACAGCA+AGG - chr6_1:100460149-100460168 None:intergenic 50.0%
! CAAGGTGCATGAGGTGTTAG+AGG + chr6_1:100460279-100460298 Msa0902330:intron 50.0%
CCACTTTGGTCCTCTACGTT+AGG - chr6_1:100460916-100460935 None:intergenic 50.0%
CCTAACGTAGAGGACCAAAG+TGG + chr6_1:100460913-100460932 Msa0902330:intron 50.0%
TCTTCCTCCGTCAACCACTT+TGG - chr6_1:100460930-100460949 None:intergenic 50.0%
GGTTGACGGAGGAAGAGTTA+AGG + chr6_1:100460934-100460953 Msa0902330:intron 50.0%
AATTGATACTCCCTCCGTCC+CGG + chr6_1:100461661-100461680 Msa0902330:intron 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - chr6_1:100461678-100461697 None:intergenic 50.0%
GTTGTTGTCGACGTCTTCGA+CGG - chr6_1:100462460-100462479 None:intergenic 50.0%
CGCCAGTTGGAATCTTGTAC+CGG + chr6_1:100462512-100462531 Msa0902330:intron 50.0%
GTCCGGTACAAGATTCCAAC+TGG - chr6_1:100462517-100462536 None:intergenic 50.0%
GTAAGAAAATGCCGAGGTCG+AGG - chr6_1:100462580-100462599 None:intergenic 50.0%
TATCTCCGGCGGTTTCTCAT+CGG - chr6_1:100462667-100462686 None:intergenic 50.0%
AAGGTCCGGTGTTCAAACTC+CGG + chr6_1:100463272-100463291 Msa0902330:intron 50.0%
GGTAACCGGAGTTTGAACAC+CGG - chr6_1:100463280-100463299 None:intergenic 50.0%
CACCTCCCTTGAATTGTGGA+AGG - chr6_1:100464835-100464854 None:intergenic 50.0%
!! AAGGGAGGTGCCACAATACA+AGG + chr6_1:100464845-100464864 Msa0902330:intron 50.0%
!! AGGGAGGTGCCACAATACAA+GGG + chr6_1:100464846-100464865 Msa0902330:intron 50.0%
! AGGTGCCACAATACAAGGGA+GGG + chr6_1:100464850-100464869 Msa0902330:intron 50.0%
TTGAGGATGGCTACAGATGG+AGG + chr6_1:100465525-100465544 Msa0902330:CDS 50.0%
GGCTACAGATGGAGGAAGTA+TGG + chr6_1:100465533-100465552 Msa0902330:CDS 50.0%
CAAACAAGCGAGAGAGAGAG+AGG - chr6_1:100465823-100465842 None:intergenic 50.0%
CTCTCTCTCTCTCGCTTGTT+TGG + chr6_1:100465821-100465840 Msa0902330:intron 50.0%
TCATCATGAGGGGGAGCTTA+GGG - chr6_1:100465872-100465891 None:intergenic 50.0%
TGTGTTGGGTCATCATGAGG+GGG - chr6_1:100465881-100465900 None:intergenic 50.0%
GATGGGAGTTGCTGGTGTAT+TGG + chr6_1:100466039-100466058 Msa0902330:intron 50.0%
!! CTTGAGTTGGGTTAACAGCG+CGG - chr6_1:100466144-100466163 None:intergenic 50.0%
CGCTGTTAACCCAACTCAAG+CGG + chr6_1:100466144-100466163 Msa0902330:intron 50.0%
! AGATTTGGGACCAAAAGCGG+CGG - chr6_1:100466191-100466210 None:intergenic 50.0%
AAGGGTTGAACGCTCTCATG+AGG + chr6_1:100466396-100466415 Msa0902330:CDS 50.0%
!! GAGGCATTGTAGGAGCAAAC+TGG - chr6_1:100466522-100466541 None:intergenic 50.0%
! TTGCACCACCACTGTTTCTC+AGG + chr6_1:100466582-100466601 Msa0902330:CDS 50.0%
ACATGCCTGAGAAACAGTGG+TGG - chr6_1:100466590-100466609 None:intergenic 50.0%
CCTTCATCAGCTAGATCCAG+CGG - chr6_1:100466682-100466701 None:intergenic 50.0%
CTTGGAGATATTGTACCCCG+TGG + chr6_1:100466706-100466725 Msa0902330:CDS 50.0%
GCACCTACCGAAGAGTTCGT+TGG + chr6_1:100458517-100458536 Msa0902330:CDS 55.0%
CTGCCAACGAACTCTTCGGT+AGG - chr6_1:100458523-100458542 None:intergenic 55.0%
GATGTGGTCGAACCTATCGC+TGG - chr6_1:100458575-100458594 None:intergenic 55.0%
ATAGGTTCGACCACATCGGC+TGG + chr6_1:100458578-100458597 Msa0902330:CDS 55.0%
! TCGGAGACGGTGGATTTCTC+CGG - chr6_1:100458745-100458764 None:intergenic 55.0%
!! GGGAGAGCACTACCTAGGTA+AGG - chr6_1:100459723-100459742 None:intergenic 55.0%
TTGGGCTGACAAGGTGCATG+AGG + chr6_1:100460270-100460289 Msa0902330:intron 55.0%
AGGACCAAAGTGGTTGACGG+AGG + chr6_1:100460923-100460942 Msa0902330:intron 55.0%
ACAGTGCTATCCTGTGGCTG+TGG - chr6_1:100461403-100461422 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG - chr6_1:100461674-100461693 None:intergenic 55.0%
GGTCAATTATACCGGGACGG+AGG + chr6_1:100461873-100461892 Msa0902330:intron 55.0%
ACCATAGTACTCCTCCGTCC+CGG - chr6_1:100461887-100461906 None:intergenic 55.0%
GTCTTCGACGGTTGAGGGAT+CGG - chr6_1:100462448-100462467 None:intergenic 55.0%
TCGACGTCTTCGACGGTTGA+GGG - chr6_1:100462453-100462472 None:intergenic 55.0%
!! CGAGGGCGTTTGGATCAAAC+CGG - chr6_1:100462562-100462581 None:intergenic 55.0%
AAGCTCCAGCGAGGATCTAC+CGG + chr6_1:100462626-100462645 Msa0902330:intron 55.0%
TCAACTCACGGTATCTCCGG+CGG - chr6_1:100462678-100462697 None:intergenic 55.0%
GTGGCACCTCCCTTGAATTG+TGG - chr6_1:100464839-100464858 None:intergenic 55.0%
! GAGGTGCCACAATACAAGGG+AGG + chr6_1:100464849-100464868 Msa0902330:intron 55.0%
CACTGCCCTCCCTTGTATTG+TGG - chr6_1:100464858-100464877 None:intergenic 55.0%
CTCTCGCTTGTTTGGCTGCT+CGG + chr6_1:100465829-100465848 Msa0902330:intron 55.0%
CATCATGAGGGGGAGCTTAG+GGG - chr6_1:100465871-100465890 None:intergenic 55.0%
GTCATCATGAGGGGGAGCTT+AGG - chr6_1:100465873-100465892 None:intergenic 55.0%
!! TCAATGGTCACCGCCGCTTT+TGG + chr6_1:100466178-100466197 Msa0902330:intron 55.0%
ATCGAGCAGCGCTACAATGC+CGG + chr6_1:100466642-100466661 Msa0902330:CDS 55.0%
TCATCAGCTAGATCCAGCGG+CGG - chr6_1:100466679-100466698 None:intergenic 55.0%
CCGCTGGATCTAGCTGATGA+AGG + chr6_1:100466679-100466698 Msa0902330:CDS 55.0%
ATCCCTGTTGCGCATTCCAC+GGG - chr6_1:100466725-100466744 None:intergenic 55.0%
CATCCCTGTTGCGCATTCCA+CGG - chr6_1:100466726-100466745 None:intergenic 55.0%
GTGAGAAGGAAGGGACGCGT+AGG - chr6_1:100458293-100458312 None:intergenic 60.0%
AAGCTCCAGCGAGGATCTGC+CGG + chr6_1:100458723-100458742 Msa0902330:CDS 60.0%
TTTCTCCGGCAGATCCTCGC+TGG - chr6_1:100458731-100458750 None:intergenic 60.0%
CGGTTTCTCATCGGAGACGG+TGG - chr6_1:100458755-100458774 None:intergenic 60.0%
CGGCGGTTTCTCATCGGAGA+CGG - chr6_1:100458758-100458777 None:intergenic 60.0%
CTATCCTGTGGCTGTGGCAG+TGG - chr6_1:100461397-100461416 None:intergenic 60.0%
GGTCAGTTATTCCGGGACGG+AGG - chr6_1:100461675-100461694 None:intergenic 60.0%
!! ACCGGGACGGAGGAGTACTA+TGG + chr6_1:100461883-100461902 Msa0902330:intron 60.0%
TCGACGGTTGAGGGATCGGT+AGG - chr6_1:100462444-100462463 None:intergenic 60.0%
GTCGACGTCTTCGACGGTTG+AGG - chr6_1:100462454-100462473 None:intergenic 60.0%
ACCGGACCGCGTATTGCAAC+CGG + chr6_1:100462530-100462549 Msa0902330:intron 60.0%
ACCGGTTGCAATACGCGGTC+CGG - chr6_1:100462534-100462553 None:intergenic 60.0%
GATCCAAACGCCCTCGACCT+CGG + chr6_1:100462566-100462585 Msa0902330:intron 60.0%
CTTCTCCGGTAGATCCTCGC+TGG - chr6_1:100462634-100462653 None:intergenic 60.0%
! TCGGAGACGGTGGACTTCTC+CGG - chr6_1:100462648-100462667 None:intergenic 60.0%
CGGTTTCTCATCGGAGACGG+TGG - chr6_1:100458755-100458774 None:intergenic 60.0%
CGGCGGTTTCTCATCGGAGA+CGG - chr6_1:100458758-100458777 None:intergenic 60.0%
CGTCTCCGATGAGAAACCGC+CGG + chr6_1:100458756-100458775 Msa0902330:CDS 60.0%
TTAGGGGACCACCCACATCC+AGG - chr6_1:100465855-100465874 None:intergenic 60.0%
CATCATCCTCATGAGGCCGC+TGG + chr6_1:100466616-100466635 Msa0902330:CDS 60.0%
TACCCCGTGGAATGCGCAAC+AGG + chr6_1:100466719-100466738 Msa0902330:CDS 60.0%
ACCCCGTGGAATGCGCAACA+GGG + chr6_1:100466720-100466739 Msa0902330:CDS 60.0%
TCCCTGTTGCGCATTCCACG+GGG - chr6_1:100466724-100466743 None:intergenic 60.0%
CGGCGTCAGCGTCGTCTTAC+AGG + chr6_1:100458677-100458696 Msa0902330:CDS 65.0%
TGTGGCTGTGGCAGTGGCAG+TGG - chr6_1:100461391-100461410 None:intergenic 65.0%
ACTGCCACTGCCACAGCCAC+AGG + chr6_1:100461390-100461409 Msa0902330:intron 65.0%
!! ATGCCGAGGTCGAGGGCGTT+TGG - chr6_1:100462572-100462591 None:intergenic 65.0%
GCTTGTTTGGCTGCTCGGCC+TGG + chr6_1:100465834-100465853 Msa0902330:intron 65.0%
TTGGCTGCTCGGCCTGGATG+TGG + chr6_1:100465840-100465859 Msa0902330:intron 65.0%
TGGCTGCTCGGCCTGGATGT+GGG + chr6_1:100465841-100465860 Msa0902330:intron 65.0%
CATCCTCATGAGGCCGCTGG+AGG + chr6_1:100466619-100466638 Msa0902330:CDS 65.0%
GATCCTCCAGCGGCCTCATG+AGG - chr6_1:100466625-100466644 None:intergenic 65.0%
AGCGCTGCTCGATCCTCCAG+CGG - chr6_1:100466635-100466654 None:intergenic 65.0%
AGCGGCGGTGATGCATCAGC+CGG - chr6_1:100466664-100466683 None:intergenic 65.0%
CTGCTCGGCCTGGATGTGGG+TGG + chr6_1:100465844-100465863 Msa0902330:intron 70.0%
GGCTGATGCATCACCGCCGC+TGG + chr6_1:100466663-100466682 Msa0902330:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 100458243 100466869 100458243 ID=Msa0902330;Name=Msa0902330
chr6_1 mRNA 100458243 100466869 100458243 ID=Msa0902330-mRNA-1;Parent=Msa0902330;Name=Msa0902330-mRNA-1;_AED=0.12;_eAED=0.12;_QI=256|1|1|1|0.5|1|3|110|278
chr6_1 exon 100458243 100458785 100458243 ID=Msa0902330-mRNA-1:exon:17764;Parent=Msa0902330-mRNA-1
chr6_1 exon 100465445 100465588 100465445 ID=Msa0902330-mRNA-1:exon:17765;Parent=Msa0902330-mRNA-1
chr6_1 exon 100466354 100466869 100466354 ID=Msa0902330-mRNA-1:exon:17766;Parent=Msa0902330-mRNA-1
chr6_1 five_prime_UTR 100458243 100458498 100458243 ID=Msa0902330-mRNA-1:five_prime_utr;Parent=Msa0902330-mRNA-1
chr6_1 CDS 100458499 100458785 100458499 ID=Msa0902330-mRNA-1:cds;Parent=Msa0902330-mRNA-1
chr6_1 CDS 100465445 100465588 100465445 ID=Msa0902330-mRNA-1:cds;Parent=Msa0902330-mRNA-1
chr6_1 CDS 100466354 100466759 100466354 ID=Msa0902330-mRNA-1:cds;Parent=Msa0902330-mRNA-1
chr6_1 three_prime_UTR 100466760 100466869 100466760 ID=Msa0902330-mRNA-1:three_prime_utr;Parent=Msa0902330-mRNA-1
Gene Sequence

>Msa0902330

ATGGAAGAGAAAGACAGAGCACCTACCGAAGAGTTCGTTGGCAGCTCAAACTGGACTCTCAACGTTGATGATTCCAGCGATAGGTTCGACCACATCGGCTGGAATCTTGTACCGGAAACCACCAAGGATAAACTGTTGCAACCGGTTCAAACAGGTTCAACTGAAACGGCATCGGTGTCGGCGTCAGCGTCGTCTTACAGGTCAAATAATCAATCAATTTCTTCAAGCTCCAGCGAGGATCTGCCGGAGAAATCCACCGTCTCCGATGAGAAACCGCCGAAAATACCGAACAAAAGTAAGAAGAAGGGGCAAAAGCGAATACGGCAACCACGGTTTGCATTTATGACCAAGAGTGAAGTTGATCATCTTGAGGATGGCTACAGATGGAGGAAGTATGGTCAGAAGGCAGTTAAAAATAGTTCATTCCCTAGGAGCTACTATAGGTGCACAAATAGTAAATGCACGGTGAAGAAAAGGGTTGAACGCTCTCATGAGGACCCAACAATTGTTATAACTACATATGAAGGCCAACATTGTCATCACACAGTTGGATTTCCTCGAAGTGGAATCATTAGTCATGAATCTTCTTTTACTGGCCAGTTTGCTCCTACAATGCCTCAATTCTATTATCCTGTTCAATTACCTGCAGAGTTAAACACTTGCACCACCACTGTTTCTCAGGCATGTCAAACACATCATCCTCATGAGGCCGCTGGAGGATCGAGCAGCGCTACAATGCCGGCTGATGCATCACCGCCGCTGGATCTAGCTGATGAAGGACTACTTGGAGATATTGTACCCCGTGGAATGCGCAACAGGGATGAGAGAAATATTTGA
Protein sequence

>Msa0902330

MEEKDRAPTEEFVGSSNWTLNVDDSSDRFDHIGWNLVPETTKDKLLQPVQTGSTETASVSASASSYRSNNQSISSSSSEDLPEKSTVSDEKPPKIPNKSKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSSFPRSYYRCTNSKCTVKKRVERSHEDPTIVITTYEGQHCHHTVGFPRSGIISHESSFTGQFAPTMPQFYYPVQLPAELNTCTTTVSQACQTHHPHEAAGGSSSATMPADASPPLDLADEGLLGDIVPRGMRNRDERNI*