Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0903610 | XP_013450895.2 | 68.522 | 467 | 86 | 10 | 19 | 455 | 33 | 468 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0903610 | sp|Q9LFQ3|SNL2_ARATH | 42.489 | 466 | 150 | 12 | 23 | 405 | 46 | 476 | 6.06e-83 | 281 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0903610 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0903610 | MtrunA17_Chr6g0452021 | 68.522 | 467 | 86 | 10 | 19 | 455 | 33 | 468 | 0.0 | 575 |
| Msa0903610 | MtrunA17_Chr6g0452001 | 57.025 | 363 | 112 | 5 | 52 | 405 | 157 | 484 | 4.24e-116 | 370 |
| Msa0903610 | MtrunA17_Chr6g0452001 | 44.493 | 227 | 87 | 4 | 19 | 234 | 53 | 251 | 1.74e-43 | 164 |
| Msa0903610 | MtrunA17_Chr8g0364231 | 33.594 | 512 | 200 | 12 | 1 | 403 | 20 | 500 | 2.30e-60 | 213 |
| Msa0903610 | MtrunA17_Chr5g0415031 | 37.696 | 191 | 82 | 5 | 23 | 203 | 37 | 200 | 2.21e-23 | 103 |
| Msa0903610 | MtrunA17_Chr5g0415031 | 34.634 | 205 | 99 | 5 | 232 | 405 | 298 | 498 | 5.07e-20 | 93.6 |
| Msa0903610 | MtrunA17_Chr8g0362641 | 37.984 | 129 | 62 | 2 | 208 | 336 | 79 | 189 | 2.93e-18 | 84.7 |
| Msa0903610 | MtrunA17_Chr8g0362641 | 36.170 | 94 | 60 | 0 | 258 | 351 | 192 | 285 | 7.13e-13 | 68.9 |
| Msa0903610 | MtrunA17_Chr7g0218901 | 43.636 | 55 | 31 | 0 | 52 | 106 | 1 | 55 | 1.11e-11 | 59.7 |
| Msa0903610 | MtrunA17_Chr5g0415081 | 42.667 | 75 | 30 | 1 | 32 | 106 | 23 | 84 | 1.53e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0903610 | AT5G15020.2 | 42.489 | 466 | 150 | 12 | 23 | 405 | 46 | 476 | 5.66e-84 | 281 |
| Msa0903610 | AT5G15020.1 | 42.489 | 466 | 150 | 12 | 23 | 405 | 46 | 476 | 6.16e-84 | 281 |
| Msa0903610 | AT3G01320.1 | 45.429 | 361 | 161 | 9 | 52 | 405 | 150 | 481 | 2.65e-72 | 248 |
| Msa0903610 | AT3G01320.2 | 38.248 | 468 | 189 | 11 | 6 | 405 | 34 | 469 | 6.72e-71 | 244 |
| Msa0903610 | AT1G24190.2 | 34.903 | 361 | 192 | 11 | 52 | 403 | 108 | 434 | 9.82e-47 | 174 |
| Msa0903610 | AT1G24190.2 | 38.278 | 209 | 91 | 5 | 15 | 214 | 3 | 182 | 4.85e-27 | 115 |
| Msa0903610 | AT1G24190.3 | 34.903 | 361 | 192 | 11 | 52 | 403 | 108 | 434 | 1.03e-46 | 174 |
| Msa0903610 | AT1G24190.3 | 38.278 | 209 | 91 | 5 | 15 | 214 | 3 | 182 | 5.14e-27 | 115 |
| Msa0903610 | AT1G24190.1 | 34.247 | 365 | 193 | 12 | 52 | 403 | 108 | 438 | 9.34e-44 | 165 |
| Msa0903610 | AT1G24190.1 | 38.278 | 209 | 91 | 5 | 15 | 214 | 3 | 182 | 4.68e-27 | 115 |
| Msa0903610 | AT1G70060.2 | 34.225 | 374 | 194 | 10 | 52 | 403 | 109 | 452 | 1.53e-41 | 159 |
| Msa0903610 | AT1G70060.2 | 40.000 | 195 | 81 | 5 | 18 | 202 | 3 | 171 | 1.12e-25 | 111 |
| Msa0903610 | AT1G70060.1 | 34.225 | 374 | 194 | 10 | 52 | 403 | 109 | 452 | 1.53e-41 | 159 |
| Msa0903610 | AT1G70060.1 | 40.000 | 195 | 81 | 5 | 18 | 202 | 3 | 171 | 1.12e-25 | 111 |
| Msa0903610 | AT1G24200.1 | 38.503 | 187 | 78 | 5 | 15 | 194 | 3 | 159 | 4.86e-24 | 99.8 |
| Msa0903610 | AT1G10450.3 | 37.619 | 210 | 88 | 8 | 12 | 210 | 70 | 247 | 1.11e-21 | 99.0 |
| Msa0903610 | AT1G10450.3 | 46.465 | 99 | 41 | 2 | 52 | 149 | 176 | 263 | 6.49e-16 | 81.3 |
| Msa0903610 | AT1G10450.2 | 37.619 | 210 | 88 | 8 | 12 | 210 | 19 | 196 | 1.17e-21 | 99.0 |
| Msa0903610 | AT1G10450.1 | 37.619 | 210 | 88 | 8 | 12 | 210 | 19 | 196 | 1.17e-21 | 99.0 |
| Msa0903610 | AT1G59890.2 | 36.782 | 174 | 79 | 4 | 28 | 195 | 44 | 192 | 1.39e-19 | 92.4 |
| Msa0903610 | AT1G59890.1 | 36.782 | 174 | 79 | 4 | 28 | 195 | 44 | 192 | 1.65e-19 | 92.4 |
| Msa0903610 | AT1G59890.3 | 36.782 | 174 | 79 | 4 | 28 | 195 | 44 | 192 | 1.68e-19 | 92.4 |
| Msa0903610 | AT1G59890.4 | 36.782 | 174 | 79 | 4 | 28 | 195 | 44 | 192 | 1.81e-19 | 92.4 |
| Msa0903610 | AT1G70030.1 | 33.333 | 183 | 81 | 7 | 23 | 194 | 5 | 157 | 1.71e-15 | 74.3 |
| Msa0903610 | AT1G24230.1 | 30.337 | 178 | 97 | 8 | 36 | 205 | 79 | 237 | 5.56e-11 | 63.2 |
Find 101 sgRNAs with CRISPR-Local
Find 483 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGCGAATTCAATGATTATT+TGG | 0.184994 | 6_2:-829488 | Msa0903610:CDS |
| TGTAAACATGCTCGTCATTT+TGG | 0.199549 | 6_2:+831578 | None:intergenic |
| TGTAAACATGCTCGTCATTT+TGG | 0.199549 | 6_2:+836550 | None:intergenic |
| AATCACTGTGGTCCTTAAAA+AGG | 0.219429 | 6_2:+836328 | None:intergenic |
| AAAGAATGATTTACAAAATA+TGG | 0.232835 | 6_2:-830186 | Msa0903610:intron |
| GCATGTTTACAAATCATTCT+TGG | 0.291056 | 6_2:-831566 | Msa0903610:CDS |
| GCATGTTTACAAATCATTCT+TGG | 0.291056 | 6_2:-836538 | Msa0903610:CDS |
| TGTCTATGAAGCTCTGAAAA+TGG | 0.297142 | 6_2:-837122 | None:intergenic |
| ATCAATGGTTGTCAGCTTCC+TGG | 0.311201 | 6_2:+837046 | None:intergenic |
| CGCTACTGATGGTCATTTAT+CGG | 0.366830 | 6_2:-829178 | Msa0903610:CDS |
| AAAATATGACATGTTCCTTC+AGG | 0.367679 | 6_2:-836973 | Msa0903610:intron |
| GTAGACATCTATATAAGCTT+TGG | 0.376047 | 6_2:-828608 | Msa0903610:three_prime_UTR |
| TTGGAGCGTTGTGAAAATAC+TGG | 0.388042 | 6_2:-829469 | Msa0903610:intron |
| ATTCTTACCAGATAATTTGC+TGG | 0.389906 | 6_2:-831314 | Msa0903610:CDS |
| ATTCTTACCAGATAATTTGC+TGG | 0.389906 | 6_2:-836286 | Msa0903610:CDS |
| GGTGGAGGTGGAGTTGTTAA+TGG | 0.390934 | 6_2:-837089 | Msa0903610:CDS |
| GAAGGCACTTCAAGAATGTT+TGG | 0.393801 | 6_2:+830234 | None:intergenic |
| TTTGCAGACGGGTTTCTTGC+TGG | 0.396888 | 6_2:-829368 | Msa0903610:intron |
| ACTGCCTCCACAGTGATTGC+TGG | 0.397139 | 6_2:+828779 | None:intergenic |
| TCCACACAACCTGCTCCATT+TGG | 0.406156 | 6_2:-831286 | Msa0903610:CDS |
| TCCACACAACCTGCTCCATT+TGG | 0.406156 | 6_2:-836258 | Msa0903610:CDS |
| GGAGGTGGCAGTGGTGGAGG+TGG | 0.414150 | 6_2:-837101 | Msa0903610:CDS |
| ACATCCATCCATCTCACGCT+TGG | 0.419117 | 6_2:+829119 | None:intergenic |
| AATGGAGGTGGCAGTGGTGG+AGG | 0.420124 | 6_2:-837104 | Msa0903610:CDS |
| GTTAAGAAGGCTGAAGCTAA+TGG | 0.427895 | 6_2:-831181 | Msa0903610:CDS |
| TTCCATTGCTAAAATTATGA+AGG | 0.428276 | 6_2:+830216 | None:intergenic |
| GAAGGTGCCAGCAAATTATC+TGG | 0.431465 | 6_2:+831307 | None:intergenic |
| GAAGGTGCCAGCAAATTATC+TGG | 0.431465 | 6_2:+836279 | None:intergenic |
| CATCCATCCATCTCACGCTT+GGG | 0.450025 | 6_2:+829120 | None:intergenic |
| TTTCAGGTGACTGATTTACT+TGG | 0.452643 | 6_2:-829529 | Msa0903610:intron |
| CAAATATGATAAAGCATCAA+TGG | 0.454072 | 6_2:+837031 | None:intergenic |
| CGTCGGCAAACATTGTTCTC+CGG | 0.456875 | 6_2:-829034 | Msa0903610:CDS |
| TGATGCTTTATCATATTTGA+AGG | 0.458097 | 6_2:-837027 | Msa0903610:CDS |
| TTTCTGATGTAGGCCTAAGC+TGG | 0.463724 | 6_2:-828863 | Msa0903610:intron |
| GCTAAGGTCAAGTTCTTGAA+TGG | 0.463830 | 6_2:+829056 | None:intergenic |
| GGTGGAGTTGTTAATGGCGG+TGG | 0.467664 | 6_2:-837083 | Msa0903610:CDS |
| TCAATGGTTGTCAGCTTCCT+GGG | 0.471642 | 6_2:+837047 | None:intergenic |
| CACTGTGGAGGCAGTGCGCA+TGG | 0.497019 | 6_2:-828771 | Msa0903610:CDS |
| TAATCAAGGTTGATGTGGAC+CGG | 0.497152 | 6_2:+828570 | None:intergenic |
| AGTCAAGCGTTAAGATTATG+TGG | 0.506272 | 6_2:-830293 | Msa0903610:CDS |
| GTCTTCGTCGTCCTCCACCT+TGG | 0.506749 | 6_2:+829149 | None:intergenic |
| GTCGGCAAACATTGTTCTCC+GGG | 0.512223 | 6_2:-829033 | Msa0903610:CDS |
| AACAATGTTTGCCGACGCTA+AGG | 0.513153 | 6_2:+829040 | None:intergenic |
| TTGGTTGACATGTCATGGCC+CGG | 0.518450 | 6_2:-828589 | Msa0903610:three_prime_UTR |
| CTCAGATCACGATGACCAAA+TGG | 0.520283 | 6_2:+831271 | None:intergenic |
| CTCAGATCACGATGACCAAA+TGG | 0.520283 | 6_2:+836243 | None:intergenic |
| GGTGACAAGTCAGCCGTCGC+AGG | 0.523912 | 6_2:-828817 | Msa0903610:CDS |
| CAAAGAACCCAAGCGTGAGA+TGG | 0.525550 | 6_2:-829127 | Msa0903610:CDS |
| GTAGGTAGAAGCTGGTAGCC+CGG | 0.528926 | 6_2:+829015 | None:intergenic |
| GGAGTTGTTAATGGCGGTGG+AGG | 0.530443 | 6_2:-837080 | Msa0903610:CDS |
| AAGCTTTGGTTGACATGTCA+TGG | 0.530565 | 6_2:-828594 | Msa0903610:three_prime_UTR |
| GAAAATGGAGGTGGCAGTGG+TGG | 0.531810 | 6_2:-837107 | Msa0903610:CDS |
| GAACCCAAGCGTGAGATGGA+TGG | 0.540388 | 6_2:-829123 | Msa0903610:CDS |
| TGGAGGCAGTGCGCATGGAT+TGG | 0.542075 | 6_2:-828766 | Msa0903610:CDS |
| AACATACAAGGAGAACTACA+TGG | 0.546676 | 6_2:-829085 | Msa0903610:CDS |
| TTGTAATCAACAGCTAATCA+AGG | 0.552289 | 6_2:+828556 | None:intergenic |
| TCTGAAAATGGAGGTGGCAG+TGG | 0.559504 | 6_2:-837110 | Msa0903610:CDS |
| TCACGATGACCAAATGGAGC+AGG | 0.560162 | 6_2:+831277 | None:intergenic |
| TCACGATGACCAAATGGAGC+AGG | 0.560162 | 6_2:+836249 | None:intergenic |
| TGTCGTCAGTAGGTAGAAGC+TGG | 0.571961 | 6_2:+829007 | None:intergenic |
| TCAGCCGTCGCAGGTTGCAG+CGG | 0.572026 | 6_2:-828808 | Msa0903610:CDS |
| ATCGGAATCATCCAAGGTGG+AGG | 0.575755 | 6_2:-829160 | Msa0903610:CDS |
| GTGGAGGTGCAAGTACTCCC+AGG | 0.577879 | 6_2:-837064 | Msa0903610:CDS |
| AATGGAGCAGGTTGTGTGGA+AGG | 0.588331 | 6_2:+831289 | None:intergenic |
| AATGGAGCAGGTTGTGTGGA+AGG | 0.588331 | 6_2:+836261 | None:intergenic |
| TGTATAACAATGTCCAGCTT+AGG | 0.593330 | 6_2:+828850 | None:intergenic |
| TGAAGCTCTGAAAATGGAGG+TGG | 0.595249 | 6_2:-837116 | None:intergenic |
| TCAGAGCCACTCGCTACTGA+TGG | 0.597556 | 6_2:-829189 | Msa0903610:intron |
| AGCTTCTACCTACTGACGAC+AGG | 0.599591 | 6_2:-829005 | Msa0903610:intron |
| AATCAAGGTTGATGTGGACC+GGG | 0.601806 | 6_2:+828571 | None:intergenic |
| CAAGAACTTGACCTTAGCGT+CGG | 0.605982 | 6_2:-829051 | Msa0903610:CDS |
| ATTTAAATGATATAATGATG+TGG | 0.608342 | 6_2:-828638 | Msa0903610:three_prime_UTR |
| ACAGCTAATCAAGGTTGATG+TGG | 0.611115 | 6_2:+828565 | None:intergenic |
| TCATTTATCGGAATCATCCA+AGG | 0.613554 | 6_2:-829166 | Msa0903610:CDS |
| ACCAAATGGAGCAGGTTGTG+TGG | 0.618955 | 6_2:+831285 | None:intergenic |
| ACCAAATGGAGCAGGTTGTG+TGG | 0.618955 | 6_2:+836257 | None:intergenic |
| ACGACCGCTGCAACCTGCGA+CGG | 0.621416 | 6_2:+828804 | None:intergenic |
| TGAAGAGAAAGAAACATACA+AGG | 0.631772 | 6_2:-829097 | Msa0903610:CDS |
| GGAGGTGGAGTTGTTAATGG+CGG | 0.634727 | 6_2:-837086 | Msa0903610:CDS |
| GTCAAGCGTTAAGATTATGT+GGG | 0.635980 | 6_2:-830292 | Msa0903610:CDS |
| TATGTGGGAAAGTTAACGAG+AGG | 0.649003 | 6_2:-830277 | Msa0903610:CDS |
| CTCACTGTAAACCTCAGTGA+TGG | 0.657914 | 6_2:+831510 | None:intergenic |
| CTCACTGTAAACCTCAGTGA+TGG | 0.657914 | 6_2:+836482 | None:intergenic |
| ACATACAAGGAGAACTACAT+GGG | 0.658464 | 6_2:-829084 | Msa0903610:CDS |
| GGACCACAGTGATTTGCTCG+AGG | 0.660600 | 6_2:-831347 | Msa0903610:CDS |
| GGACCACAGTGATTTGCTCG+AGG | 0.660600 | 6_2:-836319 | Msa0903610:CDS |
| GTAGCCAGCAATCACTGTGG+AGG | 0.664908 | 6_2:-828783 | Msa0903610:CDS |
| AAATGACCATCAGTAGCGAG+TGG | 0.680516 | 6_2:+829183 | None:intergenic |
| CTATGAAGCTCTGAAAATGG+AGG | 0.696567 | 6_2:-837119 | None:intergenic |
| CGAGAGGTTGAACAGCGCTG+AGG | 0.705236 | 6_2:-830261 | Msa0903610:CDS |
| TTTATCGGAATCATCCAAGG+TGG | 0.715628 | 6_2:-829163 | Msa0903610:CDS |
| GATCATGATAAGAGAGAATG+CGG | 0.724938 | 6_2:-831244 | Msa0903610:CDS |
| GATCATGATAAGAGAGAATG+CGG | 0.724938 | 6_2:-836216 | Msa0903610:CDS |
| CATCACTGAGGTTTACAGTG+AGG | 0.726816 | 6_2:-831509 | Msa0903610:intron |
| CATCACTGAGGTTTACAGTG+AGG | 0.726816 | 6_2:-836481 | Msa0903610:intron |
| ATTGTTATACACATTGCGCG+CGG | 0.726992 | 6_2:-828838 | Msa0903610:CDS |
| GTCGTAGCCAGCAATCACTG+TGG | 0.732284 | 6_2:-828786 | Msa0903610:CDS |
| ACTCCTCGAGCAAATCACTG+TGG | 0.776020 | 6_2:+831344 | None:intergenic |
| ACTCCTCGAGCAAATCACTG+TGG | 0.776020 | 6_2:+836316 | None:intergenic |
| AGAACACAAGACCATCACTG+AGG | 0.807754 | 6_2:-831521 | Msa0903610:CDS |
| AGAACACAAGACCATCACTG+AGG | 0.807754 | 6_2:-836493 | Msa0903610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAAGAAAATTAGAAAA+AGG | + | chr6_2:829260-829279 | None:intergenic | 10.0% |
| !! | ATCTATATTTATTACAATTT+AGG | - | chr6_2:829641-829660 | Msa0903610:intron | 10.0% |
| !!! | AATAAATAACAATTTAGAAT+AGG | + | chr6_2:830362-830381 | None:intergenic | 10.0% |
| !! | ATAAAATTAGGAATTATAAT+AGG | + | chr6_2:832370-832389 | None:intergenic | 10.0% |
| !!! | TATTATAATTCCTAATTTTA+TGG | - | chr6_2:832369-832388 | Msa0903610:intron | 10.0% |
| !!! | TTTAAAAGTATGTTAAAAAT+AGG | - | chr6_2:833535-833554 | Msa0903610:intron | 10.0% |
| !!! | TTTTTTTATTTTATCATTAG+GGG | + | chr6_2:833575-833594 | None:intergenic | 10.0% |
| !!! | TTTTAAAGAAAATTAGAAAA+AGG | + | chr6_2:829260-829279 | None:intergenic | 10.0% |
| !! | ATCTATATTTATTACAATTT+AGG | - | chr6_2:829641-829660 | Msa0903610:intron | 10.0% |
| !!! | AATAAATAACAATTTAGAAT+AGG | + | chr6_2:830362-830381 | None:intergenic | 10.0% |
| !! | AAAAAGGAAAAATGATATAT+TGG | + | chr6_2:830147-830166 | None:intergenic | 15.0% |
| !! | AAAGAATGATTTACAAAATA+TGG | - | chr6_2:830518-830537 | Msa0903610:intron | 15.0% |
| !!! | TTTCTTTAATTTTTCTTTTC+AGG | + | chr6_2:830671-830690 | None:intergenic | 15.0% |
| !! | AAAAATTGCAATGATATATA+TGG | + | chr6_2:831389-831408 | None:intergenic | 15.0% |
| !!! | TTTAGTTTTTTTAAGATATC+AGG | - | chr6_2:832020-832039 | Msa0903610:intron | 15.0% |
| !!! | TTAGTTTTTTTAAGATATCA+GGG | - | chr6_2:832021-832040 | Msa0903610:intron | 15.0% |
| !! | ATTTAAATGATATAATGATG+TGG | - | chr6_2:832060-832079 | Msa0903610:intron | 15.0% |
| !!! | AAAAGTTTATTTCTATAAGT+TGG | - | chr6_2:832782-832801 | Msa0903610:intron | 15.0% |
| !! | ATATTTCATTGTTATATTGT+TGG | - | chr6_2:833028-833047 | Msa0903610:intron | 15.0% |
| !! | TTCATTAAAATAGATAATCA+TGG | - | chr6_2:833052-833071 | Msa0903610:intron | 15.0% |
| !! | ACTTTGATGAATAAAAAAAT+TGG | - | chr6_2:833741-833760 | Msa0903610:intron | 15.0% |
| !! | AAAAAGGAAAAATGATATAT+TGG | + | chr6_2:830147-830166 | None:intergenic | 15.0% |
| !! | AAAGAATGATTTACAAAATA+TGG | - | chr6_2:830518-830537 | Msa0903610:intron | 15.0% |
| !!! | TTTCTTTAATTTTTCTTTTC+AGG | + | chr6_2:830671-830690 | None:intergenic | 15.0% |
| !! | TATTTCAATGAATTATTAAC+CGG | + | chr6_2:836050-836069 | None:intergenic | 15.0% |
| !! | AAAAATTGCAATGATATTTA+TGG | + | chr6_2:836361-836380 | None:intergenic | 15.0% |
| !!! | TTTAGTTTTTTTAAGATATC+AGG | - | chr6_2:832020-832039 | Msa0903610:intron | 15.0% |
| !!! | TTAGTTTTTTTAAGATATCA+GGG | - | chr6_2:832021-832040 | Msa0903610:intron | 15.0% |
| !! | ATTTAAATGATATAATGATG+TGG | - | chr6_2:832060-832079 | Msa0903610:intron | 15.0% |
| !!! | TCATATTTTTCTTTTTGATC+CGG | + | chr6_2:828692-828711 | None:intergenic | 20.0% |
| !! | CATTACAAAACGTAAAAATA+AGG | + | chr6_2:828766-828785 | None:intergenic | 20.0% |
| !!! | TTTGTAATGATTTTGAAATG+TGG | - | chr6_2:828777-828796 | Msa0903610:CDS | 20.0% |
| !!! | ATTTTCTTTAAAAACCGTTT+TGG | - | chr6_2:829267-829286 | Msa0903610:intron | 20.0% |
| !!! | TTTTTTGCATAAAAATCTCT+AGG | - | chr6_2:829318-829337 | Msa0903610:intron | 20.0% |
| !! | TCATAAAGTAGTATGATTAT+CGG | - | chr6_2:829738-829757 | Msa0903610:intron | 20.0% |
| !!! | AATGTTGATTTCATATTTGA+AGG | - | chr6_2:830210-830229 | Msa0903610:CDS | 20.0% |
| !! | GTTGAAATATGAAAATTAGT+TGG | - | chr6_2:830635-830654 | Msa0903610:intron | 20.0% |
| !!! | TTTAAAGTAAAAGTTTCACT+TGG | + | chr6_2:830963-830982 | None:intergenic | 20.0% |
| !! | TATTTCAACGAATTACTAAT+CGG | + | chr6_2:831076-831095 | None:intergenic | 20.0% |
| !! | AAGTATACAAATTAAACTAG+AGG | + | chr6_2:831140-831159 | None:intergenic | 20.0% |
| !!! | CTAGTTTAATTTGTATACTT+CGG | - | chr6_2:831140-831159 | Msa0903610:CDS | 20.0% |
| !!! | ATCATTGCAATTTTTTACTT+AGG | - | chr6_2:831394-831413 | Msa0903610:intron | 20.0% |
| !! | AAACATTAAAATCAACCAAA+TGG | + | chr6_2:831475-831494 | None:intergenic | 20.0% |
| !!! | AGTTTACTAAATTTTATTCC+CGG | - | chr6_2:832251-832270 | Msa0903610:intron | 20.0% |
| !!! | AAAAATTTTCCCAAAGAAAA+GGG | - | chr6_2:832297-832316 | Msa0903610:intron | 20.0% |
| !! | CTTAACATTATAATATTCCT+GGG | + | chr6_2:832397-832416 | None:intergenic | 20.0% |
| !! | ATTATTCCTAGGAATAAATT+TGG | - | chr6_2:832476-832495 | Msa0903610:intron | 20.0% |
| !! | ATACTTTAGTATCATGATAT+TGG | - | chr6_2:832892-832911 | Msa0903610:intron | 20.0% |
| !!! | AACGAATATAATTTTGATGA+TGG | + | chr6_2:833163-833182 | None:intergenic | 20.0% |
| !!! | GTTTTTAAGAGAGAAATTAT+AGG | + | chr6_2:833209-833228 | None:intergenic | 20.0% |
| !!! | CAATCAAAACAATTTTTTCT+AGG | - | chr6_2:833302-833321 | Msa0903610:intron | 20.0% |
| !!! | ACAATTTTTTCTAGGTTAAT+AGG | - | chr6_2:833310-833329 | Msa0903610:intron | 20.0% |
| !!! | AAGTTTTTTTTTTTCCTATG+GGG | + | chr6_2:833371-833390 | None:intergenic | 20.0% |
| !!! | CAAGTTTTTTTTTTTCCTAT+GGG | + | chr6_2:833372-833391 | None:intergenic | 20.0% |
| !! | AAAATCAAAGAATCTTCTAA+TGG | + | chr6_2:833409-833428 | None:intergenic | 20.0% |
| !!! | ATTTTCTTTAAAAACCGTTT+TGG | - | chr6_2:829267-829286 | Msa0903610:intron | 20.0% |
| !!! | TTTTTTGCATAAAAATCTCT+AGG | - | chr6_2:829318-829337 | Msa0903610:intron | 20.0% |
| !! | TCATAAAGTAGTATGATTAT+CGG | - | chr6_2:829738-829757 | Msa0903610:intron | 20.0% |
| !!! | AATGTTGATTTCATATTTGA+AGG | - | chr6_2:830210-830229 | Msa0903610:CDS | 20.0% |
| !! | GTTGAAATATGAAAATTAGT+TGG | - | chr6_2:830635-830654 | Msa0903610:intron | 20.0% |
| !!! | TGCAATGTTATTTTTTATCA+AGG | - | chr6_2:831049-831068 | Msa0903610:intron | 20.0% |
| !! | GGTTAATAATTCATTGAAAT+AGG | - | chr6_2:836049-836068 | Msa0903610:intron | 20.0% |
| !! | ACTTTCGAAATATATATTTC+AGG | - | chr6_2:836131-836150 | Msa0903610:intron | 20.0% |
| !!! | TTCATTTTAAGACAAAACAA+TGG | + | chr6_2:836756-836775 | None:intergenic | 20.0% |
| !! | CAAATATGATAAAGCATCAA+TGG | + | chr6_2:828648-828667 | None:intergenic | 25.0% |
| ! | TGATGCTTTATCATATTTGA+AGG | - | chr6_2:828649-828668 | Msa0903610:three_prime_UTR | 25.0% |
| !! | AATTCAACCTTTTTCTTTTG+AGG | + | chr6_2:828982-829001 | None:intergenic | 25.0% |
| !!! | TAAAGGTAATGTGCTTTTTT+CGG | - | chr6_2:829031-829050 | Msa0903610:CDS | 25.0% |
| ! | AGTAAACATTTCAACCAAAA+CGG | + | chr6_2:829284-829303 | None:intergenic | 25.0% |
| !! | TTAACAGATTTCTTTTTGTC+AGG | + | chr6_2:829508-829527 | None:intergenic | 25.0% |
| ! | CAAAAAGAAATCTGTTAAGA+AGG | - | chr6_2:829510-829529 | Msa0903610:CDS | 25.0% |
| ! | TAAGCTATCATATTATGCTT+TGG | - | chr6_2:829594-829613 | Msa0903610:intron | 25.0% |
| !!! | CTTCTTAATTTTTTACGTGT+TGG | + | chr6_2:829772-829791 | None:intergenic | 25.0% |
| ! | ACACGTAAAAAATTAAGAAG+AGG | - | chr6_2:829772-829791 | Msa0903610:intron | 25.0% |
| ! | TGCATCTAATAACTCAAAAA+AGG | + | chr6_2:830163-830182 | None:intergenic | 25.0% |
| ! | ATGAAATCAACATTCAATAG+TGG | + | chr6_2:830204-830223 | None:intergenic | 25.0% |
| ! | TTCCATTGCTAAAATTATGA+AGG | + | chr6_2:830491-830510 | None:intergenic | 25.0% |
| ! | TACGTAAATACATATACCAT+AGG | + | chr6_2:830724-830743 | None:intergenic | 25.0% |
| ! | TATGGTATATGTATTTACGT+AGG | - | chr6_2:830723-830742 | Msa0903610:intron | 25.0% |
| ! | TCAGAAAAAACTGTTAAACT+TGG | - | chr6_2:830802-830821 | Msa0903610:intron | 25.0% |
| ! | TTTCAATAGTATTCCAACTT+TGG | - | chr6_2:831006-831025 | Msa0903610:intron | 25.0% |
| ! | GATTAGTAATTCGTTGAAAT+AGG | - | chr6_2:831075-831094 | Msa0903610:intron | 25.0% |
| ! | ACTTCGGAATTATATATTTC+AGG | - | chr6_2:831156-831175 | Msa0903610:CDS | 25.0% |
| !!! | CATTTTGTTTTTCATCCATT+TGG | - | chr6_2:831457-831476 | Msa0903610:intron | 25.0% |
| ! | AACATACAAAGAGAAATACA+TGG | - | chr6_2:831613-831632 | Msa0903610:intron | 25.0% |
| ! | ACATACAAAGAGAAATACAT+GGG | - | chr6_2:831614-831633 | Msa0903610:intron | 25.0% |
| ! | TTCATCTTAAGACAAAACAA+TGG | + | chr6_2:831778-831797 | None:intergenic | 25.0% |
| !! | TTTTGTCTTAAGATGAAATG+TGG | - | chr6_2:831781-831800 | Msa0903610:intron | 25.0% |
| ! | ATGATCATTCAATAAGAATG+TGG | + | chr6_2:832136-832155 | None:intergenic | 25.0% |
| ! | TCATCCTAAAAGAAATAGAT+AGG | - | chr6_2:832152-832171 | Msa0903610:intron | 25.0% |
| ! | CATCCTAAAAGAAATAGATA+GGG | - | chr6_2:832153-832172 | Msa0903610:intron | 25.0% |
| ! | AGTAAACTTGTAACAAACAT+AGG | + | chr6_2:832239-832258 | None:intergenic | 25.0% |
| !! | GTTTACTAAATTTTATTCCC+GGG | - | chr6_2:832252-832271 | Msa0903610:intron | 25.0% |
| !! | GAAAAATTTTCCCAAAGAAA+AGG | - | chr6_2:832296-832315 | Msa0903610:intron | 25.0% |
| ! | GCTTAACATTATAATATTCC+TGG | + | chr6_2:832398-832417 | None:intergenic | 25.0% |
| !!! | CATCTTTTTTCTAAATACCT+TGG | - | chr6_2:832421-832440 | Msa0903610:intron | 25.0% |
| ! | AAGATGAGAATATTATTCCA+AGG | + | chr6_2:832441-832460 | None:intergenic | 25.0% |
| ! | ATTCTCATCTTTATATTCCA+AGG | - | chr6_2:832450-832469 | Msa0903610:intron | 25.0% |
| ! | AGTTTACCAAATTTATTCCT+AGG | + | chr6_2:832485-832504 | None:intergenic | 25.0% |
| ! | AACCTTAAGTATTATCTATG+GGG | + | chr6_2:832520-832539 | None:intergenic | 25.0% |
| ! | CAACCTTAAGTATTATCTAT+GGG | + | chr6_2:832521-832540 | None:intergenic | 25.0% |
| ! | AAAAATACGTCAATTCAAAC+AGG | + | chr6_2:832632-832651 | None:intergenic | 25.0% |
| ! | TAGTGAAATCTCTTAAGAAA+TGG | - | chr6_2:832938-832957 | Msa0903610:intron | 25.0% |
| ! | CACTTATATTACTAGCTATT+AGG | - | chr6_2:832990-833009 | Msa0903610:intron | 25.0% |
| ! | TAGCTATTAGGATACTATTT+AGG | - | chr6_2:833002-833021 | Msa0903610:intron | 25.0% |
| !! | TGGTGTCAAAAAATTAAGAA+GGG | + | chr6_2:833143-833162 | None:intergenic | 25.0% |
| !! | ATGGTGTCAAAAAATTAAGA+AGG | + | chr6_2:833144-833163 | None:intergenic | 25.0% |
| ! | TTTAAGAGAGAAATTATAGG+AGG | + | chr6_2:833206-833225 | None:intergenic | 25.0% |
| !!! | CCAAGTTTTTTTTTTTCCTA+TGG | + | chr6_2:833373-833392 | None:intergenic | 25.0% |
| ! | CCATAGGAAAAAAAAAAACT+TGG | - | chr6_2:833370-833389 | Msa0903610:intron | 25.0% |
| !! | AATTCAACCTTTTTCTTTTG+AGG | + | chr6_2:828982-829001 | None:intergenic | 25.0% |
| !!! | TAAAGGTAATGTGCTTTTTT+CGG | - | chr6_2:829031-829050 | Msa0903610:CDS | 25.0% |
| ! | AGTAAACATTTCAACCAAAA+CGG | + | chr6_2:829284-829303 | None:intergenic | 25.0% |
| !! | TTAACAGATTTCTTTTTGTC+AGG | + | chr6_2:829508-829527 | None:intergenic | 25.0% |
| ! | CAAAAAGAAATCTGTTAAGA+AGG | - | chr6_2:829510-829529 | Msa0903610:CDS | 25.0% |
| ! | TAAGCTATCATATTATGCTT+TGG | - | chr6_2:829594-829613 | Msa0903610:intron | 25.0% |
| !!! | CTTCTTAATTTTTTACGTGT+TGG | + | chr6_2:829772-829791 | None:intergenic | 25.0% |
| ! | ACACGTAAAAAATTAAGAAG+AGG | - | chr6_2:829772-829791 | Msa0903610:intron | 25.0% |
| ! | TGCATCTAATAACTCAAAAA+AGG | + | chr6_2:830163-830182 | None:intergenic | 25.0% |
| ! | GATGCATAAAACTTACTATT+AGG | - | chr6_2:830177-830196 | Msa0903610:intron | 25.0% |
| ! | ATGAAATCAACATTCAATAG+TGG | + | chr6_2:830204-830223 | None:intergenic | 25.0% |
| ! | TTCCATTGCTAAAATTATGA+AGG | + | chr6_2:830491-830510 | None:intergenic | 25.0% |
| ! | TACGTAAATACATATACCAT+AGG | + | chr6_2:830724-830743 | None:intergenic | 25.0% |
| ! | TATGGTATATGTATTTACGT+AGG | - | chr6_2:830723-830742 | Msa0903610:intron | 25.0% |
| ! | TCAGAAAAAACTGTTAAACT+TGG | - | chr6_2:830802-830821 | Msa0903610:intron | 25.0% |
| !! | ATTTCATGTAGTTTTCATTC+TGG | - | chr6_2:835909-835928 | Msa0903610:intron | 25.0% |
| ! | AAATTAAGCTGTGATTATGA+AGG | - | chr6_2:835955-835974 | Msa0903610:intron | 25.0% |
| !!! | TGTTATTTTTTATCAAGGTC+CGG | - | chr6_2:836028-836047 | Msa0903610:intron | 25.0% |
| !!! | CAATTCACTTTTCATCTATT+TGG | - | chr6_2:836435-836454 | Msa0903610:intron | 25.0% |
| AAAATATGACATGTTCCTTC+AGG | - | chr6_2:828703-828722 | Msa0903610:exon | 30.0% | |
| AACATTGTGCTTACAATCAA+GGG | - | chr6_2:828800-828819 | Msa0903610:CDS | 30.0% | |
| !!! | AGGGATCTCAATATTTTTTG+TGG | - | chr6_2:828819-828838 | Msa0903610:CDS | 30.0% |
| ! | GGTCACAACAATTTGATTTA+TGG | - | chr6_2:828901-828920 | Msa0903610:intron | 30.0% |
| ! | TGAAGATGCTATTAGTTTCT+TGG | - | chr6_2:829002-829021 | Msa0903610:intron | 30.0% |
| ! | GAAGATGCTATTAGTTTCTT+GGG | - | chr6_2:829003-829022 | Msa0903610:intron | 30.0% |
| CAAATTTACCAATTACAGCT+AGG | + | chr6_2:829088-829107 | None:intergenic | 30.0% | |
| GCATGTTTACAAATCATTCT+TGG | - | chr6_2:829138-829157 | Msa0903610:CDS | 30.0% | |
| ! | ATTCTTACCAGATAATTTGC+TGG | - | chr6_2:829390-829409 | Msa0903610:intron | 30.0% |
| !! | TGCCTTCATAATTTTAGCAA+TGG | - | chr6_2:830486-830505 | Msa0903610:intron | 30.0% |
| AAAAGCCATAGAGATGTAAA+AGG | + | chr6_2:830601-830620 | None:intergenic | 30.0% | |
| !!! | ATTTTTCTTTTCAGGTTGCA+TGG | + | chr6_2:830663-830682 | None:intergenic | 30.0% |
| TGTATTTACGTAGGATTAAC+AGG | - | chr6_2:830732-830751 | Msa0903610:intron | 30.0% | |
| TTAACAGGAAAGAATGTGAT+TGG | - | chr6_2:830747-830766 | Msa0903610:intron | 30.0% | |
| TGAAATAGGTTTCACTATCT+CGG | - | chr6_2:831089-831108 | Msa0903610:intron | 30.0% | |
| GAGCGAATTCAATGATTATT+TGG | - | chr6_2:831213-831232 | Msa0903610:CDS | 30.0% | |
| ! | AAGTTTTACCTGTCATCAAT+AGG | + | chr6_2:831704-831723 | None:intergenic | 30.0% |
| !! | GACATTGTTATTTCTGATGT+AGG | - | chr6_2:831825-831844 | Msa0903610:intron | 30.0% |
| GTAGACATCTATATAAGCTT+TGG | - | chr6_2:832090-832109 | Msa0903610:intron | 30.0% | |
| AATAAAGTTTCCATGGAGAT+GGG | - | chr6_2:832324-832343 | Msa0903610:intron | 30.0% | |
| TTCCAAGGAATATTATTCCT+AGG | - | chr6_2:832465-832484 | Msa0903610:intron | 30.0% | |
| TTCCTAGGAATAATATTCCT+TGG | + | chr6_2:832470-832489 | None:intergenic | 30.0% | |
| ACCTTAAGTATTATCTATGG+GGG | + | chr6_2:832519-832538 | None:intergenic | 30.0% | |
| GCAACCTTAAGTATTATCTA+TGG | + | chr6_2:832522-832541 | None:intergenic | 30.0% | |
| ! | ATTGGTCATTGTAGTCATTT+TGG | - | chr6_2:832910-832929 | Msa0903610:intron | 30.0% |
| !! | TTGGTCATTGTAGTCATTTT+GGG | - | chr6_2:832911-832930 | Msa0903610:intron | 30.0% |
| ! | AAGGGGTAAGATTGTATTTT+TGG | + | chr6_2:833125-833144 | None:intergenic | 30.0% |
| GGTGTCAAAAAATTAAGAAG+GGG | + | chr6_2:833142-833161 | None:intergenic | 30.0% | |
| AAAGAATCTTCTAATGGCAA+GGG | + | chr6_2:833403-833422 | None:intergenic | 30.0% | |
| AAGGAAGAAGAAATAAGGAT+GGG | + | chr6_2:833681-833700 | None:intergenic | 30.0% | |
| AAAGGAAGAAGAAATAAGGA+TGG | + | chr6_2:833682-833701 | None:intergenic | 30.0% | |
| GTTGAAAGGAAGAAGAAATA+AGG | + | chr6_2:833686-833705 | None:intergenic | 30.0% | |
| ! | AACTTAATCGATGAGTTGAA+AGG | + | chr6_2:833700-833719 | None:intergenic | 30.0% |
| ! | GGTCACAACAATTTGATTTA+TGG | - | chr6_2:828901-828920 | Msa0903610:intron | 30.0% |
| ! | TGAAGATGCTATTAGTTTCT+TGG | - | chr6_2:829002-829021 | Msa0903610:intron | 30.0% |
| ! | GAAGATGCTATTAGTTTCTT+GGG | - | chr6_2:829003-829022 | Msa0903610:intron | 30.0% |
| CAAATTTACCAATTACAGCT+AGG | + | chr6_2:829088-829107 | None:intergenic | 30.0% | |
| GCATGTTTACAAATCATTCT+TGG | - | chr6_2:829138-829157 | Msa0903610:CDS | 30.0% | |
| ! | ATTCTTACCAGATAATTTGC+TGG | - | chr6_2:829390-829409 | Msa0903610:intron | 30.0% |
| !! | TGCCTTCATAATTTTAGCAA+TGG | - | chr6_2:830486-830505 | Msa0903610:intron | 30.0% |
| AAAAGCCATAGAGATGTAAA+AGG | + | chr6_2:830601-830620 | None:intergenic | 30.0% | |
| !!! | ATTTTTCTTTTCAGGTTGCA+TGG | + | chr6_2:830663-830682 | None:intergenic | 30.0% |
| TGTATTTACGTAGGATTAAC+AGG | - | chr6_2:830732-830751 | Msa0903610:intron | 30.0% | |
| TTAACAGGAAAGAATGTGAT+TGG | - | chr6_2:830747-830766 | Msa0903610:intron | 30.0% | |
| AATCACAGCTTAATTTCACT+TGG | + | chr6_2:835951-835970 | None:intergenic | 30.0% | |
| TGAAATAGGTTTCACTATCT+TGG | - | chr6_2:831089-831108 | Msa0903610:intron | 30.0% | |
| GAGCGAATTCAATGATTATT+TGG | - | chr6_2:831213-831232 | Msa0903610:CDS | 30.0% | |
| TGAAGAGAAAGAAACATACA+AGG | - | chr6_2:831601-831620 | Msa0903610:intron | 30.0% | |
| ! | AAATGTGTTGACATGCATTT+AGG | - | chr6_2:836774-836793 | Msa0903610:intron | 30.0% |
| !! | GACATTGTTATTTCTGATGT+AGG | - | chr6_2:831825-831844 | Msa0903610:intron | 30.0% |
| GTAGACATCTATATAAGCTT+TGG | - | chr6_2:832090-832109 | Msa0903610:intron | 30.0% | |
| TGAAATCTTTCATGACCTGA+AGG | + | chr6_2:828721-828740 | None:intergenic | 35.0% | |
| TCAGGTCATGAAAGATTTCA+AGG | - | chr6_2:828721-828740 | Msa0903610:CDS | 35.0% | |
| AGATTTCAAGGCTCAAAAGT+AGG | - | chr6_2:828733-828752 | Msa0903610:CDS | 35.0% | |
| GAACATTGTGCTTACAATCA+AGG | - | chr6_2:828799-828818 | Msa0903610:CDS | 35.0% | |
| ! | TTATCTCATGTCCTTTTGGT+AGG | + | chr6_2:828939-828958 | None:intergenic | 35.0% |
| !! | AGTCTTATCTCATGTCCTTT+TGG | + | chr6_2:828943-828962 | None:intergenic | 35.0% |
| ACATGAGATAAGACTTGATG+AGG | - | chr6_2:828948-828967 | Msa0903610:intron | 35.0% | |
| TGAAGCTCCTCAAAAGAAAA+AGG | - | chr6_2:828972-828991 | Msa0903610:intron | 35.0% | |
| TAGTTTCTTGGGCAAGATAA+AGG | - | chr6_2:829014-829033 | Msa0903610:CDS | 35.0% | |
| CAGCTAGGAATTAACGATAT+CGG | + | chr6_2:829073-829092 | None:intergenic | 35.0% | |
| CGTTAATTCCTAGCTGTAAT+TGG | - | chr6_2:829077-829096 | Msa0903610:CDS | 35.0% | |
| ! | TGTAAACATGCTCGTCATTT+TGG | + | chr6_2:829129-829148 | None:intergenic | 35.0% |
| AGGTTTACAGTGAGGTAATA+TGG | - | chr6_2:829203-829222 | Msa0903610:intron | 35.0% | |
| !! | ACAAAGTGCTGAAAGTCTAT+AGG | + | chr6_2:829234-829253 | None:intergenic | 35.0% |
| ATCACTGTGGTCCTTAAAAA+GGG | + | chr6_2:829350-829369 | None:intergenic | 35.0% | |
| AATCACTGTGGTCCTTAAAA+AGG | + | chr6_2:829351-829370 | None:intergenic | 35.0% | |
| GATCATGATAAGAGAGAATG+CGG | - | chr6_2:829460-829479 | Msa0903610:intron | 35.0% | |
| ! | GATTTCTTTTTGTCAGGAGA+GGG | + | chr6_2:829502-829521 | None:intergenic | 35.0% |
| ! | AGATTTCTTTTTGTCAGGAG+AGG | + | chr6_2:829503-829522 | None:intergenic | 35.0% |
| TCGAAAACATGATGGTTTAC+AGG | + | chr6_2:829689-829708 | None:intergenic | 35.0% | |
| ACAGCATATCGAAAACATGA+TGG | + | chr6_2:829697-829716 | None:intergenic | 35.0% | |
| ! | GTTGAAGAAGCTTGTTTAAC+AGG | - | chr6_2:830044-830063 | Msa0903610:intron | 35.0% |
| TTGTTTAACAGGAGAACTAC+AGG | - | chr6_2:830055-830074 | Msa0903610:intron | 35.0% | |
| TGTTTAACAGGAGAACTACA+GGG | - | chr6_2:830056-830075 | Msa0903610:intron | 35.0% | |
| GAAACTTCAAGAACTCGAAA+TGG | + | chr6_2:830264-830283 | None:intergenic | 35.0% | |
| CAATCAAGTAAGATGCTAAC+AGG | + | chr6_2:830306-830325 | None:intergenic | 35.0% | |
| AGTCAAGCGTTAAGATTATG+TGG | - | chr6_2:830411-830430 | Msa0903610:intron | 35.0% | |
| GTCAAGCGTTAAGATTATGT+GGG | - | chr6_2:830412-830431 | Msa0903610:intron | 35.0% | |
| ! | TTGCTCCTTTTACATCTCTA+TGG | - | chr6_2:830593-830612 | Msa0903610:intron | 35.0% |
| ! | TGTAGTGTTCAAAGGGTTTT+AGG | - | chr6_2:830778-830797 | Msa0903610:intron | 35.0% |
| ! | GTAGTGTTCAAAGGGTTTTA+GGG | - | chr6_2:830779-830798 | Msa0903610:intron | 35.0% |
| ! | AAATTTTGCTGCGACTATGA+AGG | - | chr6_2:830981-831000 | Msa0903610:intron | 35.0% |
| ! | TTTCAGGTGACTGATTTACT+TGG | - | chr6_2:831172-831191 | Msa0903610:CDS | 35.0% |
| !!! | TGCCTATTTGTTTTTGCAGA+CGG | - | chr6_2:831324-831343 | Msa0903610:CDS | 35.0% |
| TCATTTATCGGAATCATCCA+AGG | - | chr6_2:831532-831551 | Msa0903610:CDS | 35.0% | |
| ACAGGTAAAACTTGCGTTAT+CGG | - | chr6_2:831711-831730 | Msa0903610:intron | 35.0% | |
| AAATGTGGTGACATGCATTT+AGG | - | chr6_2:831796-831815 | Msa0903610:intron | 35.0% | |
| TGTATAACAATGTCCAGCTT+AGG | + | chr6_2:831851-831870 | None:intergenic | 35.0% | |
| ATTCAATAAGAATGTGGACC+GGG | + | chr6_2:832130-832149 | None:intergenic | 35.0% | |
| CATTCAATAAGAATGTGGAC+CGG | + | chr6_2:832131-832150 | None:intergenic | 35.0% | |
| !! | GCACCCTATCTATTTCTTTT+AGG | + | chr6_2:832159-832178 | None:intergenic | 35.0% |
| AAGTTATCTTCGTAGATTCC+TGG | - | chr6_2:832188-832207 | Msa0903610:intron | 35.0% | |
| AGTTATCTTCGTAGATTCCT+GGG | - | chr6_2:832189-832208 | Msa0903610:intron | 35.0% | |
| ATTCCTGGGAATAAAACGAT+AGG | - | chr6_2:832203-832222 | Msa0903610:intron | 35.0% | |
| !! | ATTCCTATCGTTTTATTCCC+AGG | + | chr6_2:832209-832228 | None:intergenic | 35.0% |
| ! | GGGAAAATTTTTCTATTCCC+AGG | + | chr6_2:832289-832308 | None:intergenic | 35.0% |
| ! | AATTTTCCCAAAGAAAAGGG+TGG | - | chr6_2:832300-832319 | Msa0903610:intron | 35.0% |
| ! | ATTTTCCCAAAGAAAAGGGT+GGG | - | chr6_2:832301-832320 | Msa0903610:intron | 35.0% |
| ! | TTATTCCCACCCTTTTCTTT+GGG | + | chr6_2:832309-832328 | None:intergenic | 35.0% |
| ! | TTTATTCCCACCCTTTTCTT+TGG | + | chr6_2:832310-832329 | None:intergenic | 35.0% |
| GAATAAAGTTTCCATGGAGA+TGG | - | chr6_2:832323-832342 | Msa0903610:intron | 35.0% | |
| ! | TTCCTAATTTTATGGTTCCC+AGG | - | chr6_2:832377-832396 | Msa0903610:intron | 35.0% |
| TTCCTGGGAACCATAAAATT+AGG | + | chr6_2:832382-832401 | None:intergenic | 35.0% | |
| ACCCCCATAGATAATACTTA+AGG | - | chr6_2:832515-832534 | Msa0903610:intron | 35.0% | |
| ATGGCAAAACGTACTTATGT+AGG | + | chr6_2:832601-832620 | None:intergenic | 35.0% | |
| ! | AAGTACGTTTTGCCATACTT+AGG | - | chr6_2:832605-832624 | Msa0903610:intron | 35.0% |
| ! | AGTACGTTTTGCCATACTTA+GGG | - | chr6_2:832606-832625 | Msa0903610:intron | 35.0% |
| AGAAATGGCTTCAATCCTTA+AGG | - | chr6_2:832953-832972 | Msa0903610:intron | 35.0% | |
| GCTTATGTCATAACTCCTTA+AGG | + | chr6_2:832971-832990 | None:intergenic | 35.0% | |
| AAGAATCTTCTAATGGCAAG+GGG | + | chr6_2:833402-833421 | None:intergenic | 35.0% | |
| CAAAGAATCTTCTAATGGCA+AGG | + | chr6_2:833404-833423 | None:intergenic | 35.0% | |
| !! | GTTGAGTTTTGTGGATTAAG+AGG | - | chr6_2:833790-833809 | Msa0903610:intron | 35.0% |
| ! | TTATCTCATGTCCTTTTGGT+AGG | + | chr6_2:828939-828958 | None:intergenic | 35.0% |
| !! | AGTCTTATCTCATGTCCTTT+TGG | + | chr6_2:828943-828962 | None:intergenic | 35.0% |
| ACATGAGATAAGACTTGATG+AGG | - | chr6_2:828948-828967 | Msa0903610:intron | 35.0% | |
| TGAAGCTCCTCAAAAGAAAA+AGG | - | chr6_2:828972-828991 | Msa0903610:intron | 35.0% | |
| TAGTTTCTTGGGCAAGATAA+AGG | - | chr6_2:829014-829033 | Msa0903610:CDS | 35.0% | |
| CAGCTAGGAATTAACGATAT+CGG | + | chr6_2:829073-829092 | None:intergenic | 35.0% | |
| CGTTAATTCCTAGCTGTAAT+TGG | - | chr6_2:829077-829096 | Msa0903610:CDS | 35.0% | |
| ! | TGTAAACATGCTCGTCATTT+TGG | + | chr6_2:829129-829148 | None:intergenic | 35.0% |
| AGGTTTACAGTGAGGTAATA+TGG | - | chr6_2:829203-829222 | Msa0903610:intron | 35.0% | |
| !! | ACAAAGTGCTGAAAGTCTAT+AGG | + | chr6_2:829234-829253 | None:intergenic | 35.0% |
| ATCACTGTGGTCCTTAAAAA+GGG | + | chr6_2:829350-829369 | None:intergenic | 35.0% | |
| AATCACTGTGGTCCTTAAAA+AGG | + | chr6_2:829351-829370 | None:intergenic | 35.0% | |
| GATCATGATAAGAGAGAATG+CGG | - | chr6_2:829460-829479 | Msa0903610:intron | 35.0% | |
| ! | GATTTCTTTTTGTCAGGAGA+GGG | + | chr6_2:829502-829521 | None:intergenic | 35.0% |
| ! | AGATTTCTTTTTGTCAGGAG+AGG | + | chr6_2:829503-829522 | None:intergenic | 35.0% |
| TCGAAAACATGATGGTTTAC+AGG | + | chr6_2:829689-829708 | None:intergenic | 35.0% | |
| ACAGCATATCGAAAACATGA+TGG | + | chr6_2:829697-829716 | None:intergenic | 35.0% | |
| ! | GTTGAAGAAGCTTGTTTAAC+AGG | - | chr6_2:830044-830063 | Msa0903610:intron | 35.0% |
| TTGTTTAACAGGAGAACTAC+AGG | - | chr6_2:830055-830074 | Msa0903610:intron | 35.0% | |
| TGTTTAACAGGAGAACTACA+GGG | - | chr6_2:830056-830075 | Msa0903610:intron | 35.0% | |
| GAAACTTCAAGAACTCGAAA+TGG | + | chr6_2:830264-830283 | None:intergenic | 35.0% | |
| CAATCAAGTAAGATGCTAAC+AGG | + | chr6_2:830306-830325 | None:intergenic | 35.0% | |
| AGTCAAGCGTTAAGATTATG+TGG | - | chr6_2:830411-830430 | Msa0903610:intron | 35.0% | |
| GTCAAGCGTTAAGATTATGT+GGG | - | chr6_2:830412-830431 | Msa0903610:intron | 35.0% | |
| ! | TTGCTCCTTTTACATCTCTA+TGG | - | chr6_2:830593-830612 | Msa0903610:intron | 35.0% |
| ! | TGTAGTGTTCAAAGGGTTTT+AGG | - | chr6_2:830778-830797 | Msa0903610:intron | 35.0% |
| ! | GTAGTGTTCAAAGGGTTTTA+GGG | - | chr6_2:830779-830798 | Msa0903610:intron | 35.0% |
| ACAACTGAAAAACGCTAAGT+TGG | + | chr6_2:835996-836015 | None:intergenic | 35.0% | |
| ! | TTTCAGGTGACTGATTTACT+TGG | - | chr6_2:831172-831191 | Msa0903610:CDS | 35.0% |
| !!! | TGCGTATTTGTTTTTGCAGA+CGG | - | chr6_2:836296-836315 | Msa0903610:CDS | 35.0% |
| TCATTTATCGGAATCATCCA+AGG | - | chr6_2:831532-831551 | Msa0903610:CDS | 35.0% | |
| AACATACAAGGAGAACTACA+TGG | - | chr6_2:836591-836610 | Msa0903610:intron | 35.0% | |
| ACATACAAGGAGAACTACAT+GGG | - | chr6_2:836592-836611 | Msa0903610:intron | 35.0% | |
| TTCCAAAATGAACATTCAGG+AGG | + | chr6_2:836733-836752 | None:intergenic | 35.0% | |
| TGGTTCCAAAATGAACATTC+AGG | + | chr6_2:836736-836755 | None:intergenic | 35.0% | |
| TGTATAACAATGTCCAGCTT+AGG | + | chr6_2:831851-831870 | None:intergenic | 35.0% | |
| GGAAGTGAAAAACACGTTTC+CGG | - | chr6_2:828670-828689 | Msa0903610:three_prime_UTR | 40.0% | |
| ! | TTTTTGTGGCGATTGTTTCC+AGG | - | chr6_2:828833-828852 | Msa0903610:CDS | 40.0% |
| GCTGTCAAGGAACTATTCAA+AGG | - | chr6_2:828880-828899 | Msa0903610:intron | 40.0% | |
| TTCAACGCTTACCTACCAAA+AGG | - | chr6_2:828925-828944 | Msa0903610:intron | 40.0% | |
| ! | CTAGGTTGCTACCCTTTTTA+AGG | - | chr6_2:829336-829355 | Msa0903610:intron | 40.0% |
| GTTAAGAAGGCTGAAGCTAA+TGG | - | chr6_2:829523-829542 | Msa0903610:CDS | 40.0% | |
| GTTTAACAGGAGAACTACAG+GGG | - | chr6_2:830057-830076 | Msa0903610:intron | 40.0% | |
| GTAAGATGCTAACAGGACAA+AGG | + | chr6_2:830299-830318 | None:intergenic | 40.0% | |
| AACGCTTGACTATACATGAC+TGG | + | chr6_2:830402-830421 | None:intergenic | 40.0% | |
| TATGTGGGAAAGTTAACGAG+AGG | - | chr6_2:830427-830446 | Msa0903610:intron | 40.0% | |
| !! | GAAGGCACTTCAAGAATGTT+TGG | + | chr6_2:830473-830492 | None:intergenic | 40.0% |
| CTAATGATCCAAAGTCAGCA+AGG | + | chr6_2:830566-830585 | None:intergenic | 40.0% | |
| CTACTCAATGCTTTGACCTA+TGG | - | chr6_2:830705-830724 | Msa0903610:intron | 40.0% | |
| AGCTTGCATGTAGTGTTCAA+AGG | - | chr6_2:830770-830789 | Msa0903610:intron | 40.0% | |
| GCTTGCATGTAGTGTTCAAA+GGG | - | chr6_2:830771-830790 | Msa0903610:intron | 40.0% | |
| ACAACTGAAAACGCCAAAGT+TGG | + | chr6_2:831022-831041 | None:intergenic | 40.0% | |
| !! | TTGGAGCGTTGTGAAAATAC+TGG | - | chr6_2:831232-831251 | Msa0903610:CDS | 40.0% |
| TCGTATTTCCTCATACCTTG+TGG | - | chr6_2:831293-831312 | Msa0903610:CDS | 40.0% | |
| GAATGAAACCACAAGGTATG+AGG | + | chr6_2:831304-831323 | None:intergenic | 40.0% | |
| ATAGGCAGAATGAAACCACA+AGG | + | chr6_2:831311-831330 | None:intergenic | 40.0% | |
| !!! | GCCTATTTGTTTTTGCAGAC+GGG | - | chr6_2:831325-831344 | Msa0903610:CDS | 40.0% |
| ACCCGTCTGCAAAAACAAAT+AGG | + | chr6_2:831329-831348 | None:intergenic | 40.0% | |
| CGCTACTGATGGTCATTTAT+CGG | - | chr6_2:831520-831539 | Msa0903610:CDS | 40.0% | |
| TTTATCGGAATCATCCAAGG+TGG | - | chr6_2:831535-831554 | Msa0903610:CDS | 40.0% | |
| GCTAAGGTCAAGTTCTTGAA+TGG | + | chr6_2:831645-831664 | None:intergenic | 40.0% | |
| TGTCATCAATAGGTAGAAGC+TGG | + | chr6_2:831694-831713 | None:intergenic | 40.0% | |
| ! | AGCTTCTACCTATTGATGAC+AGG | - | chr6_2:831693-831712 | Msa0903610:intron | 40.0% |
| AAAATGAACATTCAGGAGGC+AGG | + | chr6_2:831751-831770 | None:intergenic | 40.0% | |
| ! | TGCCTCCTGAATGTTCATTT+TGG | - | chr6_2:831750-831769 | Msa0903610:intron | 40.0% |
| CTCCAAAATGAACATTCAGG+AGG | + | chr6_2:831755-831774 | None:intergenic | 40.0% | |
| TGGCTCCAAAATGAACATTC+AGG | + | chr6_2:831758-831777 | None:intergenic | 40.0% | |
| ATTGTTATACACATTGCGCG+TGG | - | chr6_2:831860-831879 | Msa0903610:intron | 40.0% | |
| TGAAGTTATTCCCATCTCCA+TGG | + | chr6_2:832337-832356 | None:intergenic | 40.0% | |
| ATTCAAACAGGCCCTAAGTA+TGG | + | chr6_2:832620-832639 | None:intergenic | 40.0% | |
| !! | ATGTTAACTTGTGCCCTCAA+GGG | + | chr6_2:832858-832877 | None:intergenic | 40.0% |
| !! | AATGTTAACTTGTGCCCTCA+AGG | + | chr6_2:832859-832878 | None:intergenic | 40.0% |
| TAAACCAAAAGTCCCCCAAA+TGG | + | chr6_2:833348-833367 | None:intergenic | 40.0% | |
| AGAATCTTCTAATGGCAAGG+GGG | + | chr6_2:833401-833420 | None:intergenic | 40.0% | |
| GAAGAAATAAGGATGGGATC+TGG | + | chr6_2:833675-833694 | None:intergenic | 40.0% | |
| !! | TGGTGTTGATAGATTGAGCT+TGG | - | chr6_2:833761-833780 | Msa0903610:intron | 40.0% |
| ! | TGTTGATAGATTGAGCTTGG+TGG | - | chr6_2:833764-833783 | Msa0903610:intron | 40.0% |
| ! | GTTGATAGATTGAGCTTGGT+GGG | - | chr6_2:833765-833784 | Msa0903610:intron | 40.0% |
| !! | GTTTTGTGGATTAAGAGGCT+TGG | - | chr6_2:833795-833814 | Msa0903610:intron | 40.0% |
| GCTGTCAAGGAACTATTCAA+AGG | - | chr6_2:828880-828899 | Msa0903610:intron | 40.0% | |
| TTCAACGCTTACCTACCAAA+AGG | - | chr6_2:828925-828944 | Msa0903610:intron | 40.0% | |
| ! | CTAGGTTGCTACCCTTTTTA+AGG | - | chr6_2:829336-829355 | Msa0903610:intron | 40.0% |
| GTTAAGAAGGCTGAAGCTAA+TGG | - | chr6_2:829523-829542 | Msa0903610:CDS | 40.0% | |
| GTTTAACAGGAGAACTACAG+GGG | - | chr6_2:830057-830076 | Msa0903610:intron | 40.0% | |
| GTAAGATGCTAACAGGACAA+AGG | + | chr6_2:830299-830318 | None:intergenic | 40.0% | |
| AACGCTTGACTATACATGAC+TGG | + | chr6_2:830402-830421 | None:intergenic | 40.0% | |
| TATGTGGGAAAGTTAACGAG+AGG | - | chr6_2:830427-830446 | Msa0903610:intron | 40.0% | |
| !! | GAAGGCACTTCAAGAATGTT+TGG | + | chr6_2:830473-830492 | None:intergenic | 40.0% |
| CTAATGATCCAAAGTCAGCA+AGG | + | chr6_2:830566-830585 | None:intergenic | 40.0% | |
| CTACTCAATGCTTTGACCTA+TGG | - | chr6_2:830705-830724 | Msa0903610:intron | 40.0% | |
| AGCTTGCATGTAGTGTTCAA+AGG | - | chr6_2:830770-830789 | Msa0903610:intron | 40.0% | |
| GCTTGCATGTAGTGTTCAAA+GGG | - | chr6_2:830771-830790 | Msa0903610:intron | 40.0% | |
| TTACCTTGCGAGTTCTATTG+CGG | - | chr6_2:836091-836110 | Msa0903610:intron | 40.0% | |
| !! | TTGGAGCGTTGTGAAAATAC+TGG | - | chr6_2:831232-831251 | Msa0903610:CDS | 40.0% |
| ! | TCGAATTTTCTCATGCCTTG+AGG | - | chr6_2:836265-836284 | Msa0903610:CDS | 40.0% |
| ATACGCAGAATGAAACCTCA+AGG | + | chr6_2:836283-836302 | None:intergenic | 40.0% | |
| !!! | GCGTATTTGTTTTTGCAGAC+GGG | - | chr6_2:836297-836316 | Msa0903610:CDS | 40.0% |
| CGCTACTGATGGTCATTTAT+CGG | - | chr6_2:831520-831539 | Msa0903610:CDS | 40.0% | |
| TTTATCGGAATCATCCAAGG+TGG | - | chr6_2:831535-831554 | Msa0903610:CDS | 40.0% | |
| GCTAAGGTCAAGTTCTTGAA+TGG | + | chr6_2:831645-831664 | None:intergenic | 40.0% | |
| ! | AAGTTTTACCTGTCGTCAGT+AGG | + | chr6_2:836682-836701 | None:intergenic | 40.0% |
| AAAATGAACATTCAGGAGGC+AGG | + | chr6_2:831751-831770 | None:intergenic | 40.0% | |
| ! | TGCCTCCTGAATGTTCATTT+TGG | - | chr6_2:831750-831769 | Msa0903610:intron | 40.0% |
| ATTGTTATACACATTGCGCG+CGG | - | chr6_2:831860-831879 | Msa0903610:intron | 40.0% | |
| ! | AAGCTTTGGTTGACATGTCA+TGG | - | chr6_2:837082-837101 | Msa0903610:CDS | 40.0% |
| !! | TAATCAAGGTTGATGTGGAC+CGG | + | chr6_2:837109-837128 | None:intergenic | 40.0% |
| TCAATGGTTGTCAGCTTCCT+GGG | + | chr6_2:828632-828651 | None:intergenic | 45.0% | |
| ATCAATGGTTGTCAGCTTCC+TGG | + | chr6_2:828633-828652 | None:intergenic | 45.0% | |
| AGAACACAAGACCATCACTG+AGG | - | chr6_2:829183-829202 | Msa0903610:CDS | 45.0% | |
| CTCACTGTAAACCTCAGTGA+TGG | + | chr6_2:829197-829216 | None:intergenic | 45.0% | |
| CATCACTGAGGTTTACAGTG+AGG | - | chr6_2:829195-829214 | Msa0903610:intron | 45.0% | |
| !! | GAAGGTGCCAGCAAATTATC+TGG | + | chr6_2:829400-829419 | None:intergenic | 45.0% |
| CTCAGATCACGATGACCAAA+TGG | + | chr6_2:829436-829455 | None:intergenic | 45.0% | |
| GTCAGCAAGGATACACGAAA+AGG | + | chr6_2:830553-830572 | None:intergenic | 45.0% | |
| !! | TCGTGTATCCTTGCTGACTT+TGG | - | chr6_2:830555-830574 | Msa0903610:intron | 45.0% |
| AAATGACCATCAGTAGCGAG+TGG | + | chr6_2:831518-831537 | None:intergenic | 45.0% | |
| CAAAGAACACAAGCATGCGA+TGG | - | chr6_2:831571-831590 | Msa0903610:CDS | 45.0% | |
| CAAGAACTTGACCTTAGCGT+CGG | - | chr6_2:831647-831666 | Msa0903610:intron | 45.0% | |
| AACAATGTTTGCCGACGCTA+AGG | + | chr6_2:831661-831680 | None:intergenic | 45.0% | |
| TTTCTGATGTAGGCCTAAGC+TGG | - | chr6_2:831835-831854 | Msa0903610:intron | 45.0% | |
| ! | AAGCTTTGGTTGACACGTCA+TGG | - | chr6_2:832104-832123 | Msa0903610:intron | 45.0% |
| ! | TCCCAGGAACGTTTTATACC+CGG | + | chr6_2:832273-832292 | None:intergenic | 45.0% |
| GGGTGGGAATAAAGTTTCCA+TGG | - | chr6_2:832317-832336 | Msa0903610:intron | 45.0% | |
| GGTTGCACATGAAGAGAAGA+AGG | - | chr6_2:832536-832555 | Msa0903610:intron | 45.0% | |
| !!! | GGACTTTTGGTTTACCCCAT+AGG | - | chr6_2:833354-833373 | Msa0903610:intron | 45.0% |
| GATCCAGTCAGATTGCTTGA+CGG | + | chr6_2:833435-833454 | None:intergenic | 45.0% | |
| ! | CTGTGTGATGATGAGTGAAG+TGG | - | chr6_2:833478-833497 | Msa0903610:intron | 45.0% |
| AGAAGAGAAGGAGAACAGTG+GGG | + | chr6_2:833643-833662 | None:intergenic | 45.0% | |
| GAGAAGAGAAGGAGAACAGT+GGG | + | chr6_2:833644-833663 | None:intergenic | 45.0% | |
| TGGAGAAGATGGAGAAGAGA+AGG | + | chr6_2:833655-833674 | None:intergenic | 45.0% | |
| !!! | TGGTGGGTTGTTGAGTTTTG+TGG | - | chr6_2:833781-833800 | Msa0903610:intron | 45.0% |
| !! | TTAAGAGGCTTGGTGTTTCC+AGG | - | chr6_2:833805-833824 | Msa0903610:intron | 45.0% |
| AGAACACAAGACCATCACTG+AGG | - | chr6_2:829183-829202 | Msa0903610:CDS | 45.0% | |
| CTCACTGTAAACCTCAGTGA+TGG | + | chr6_2:829197-829216 | None:intergenic | 45.0% | |
| CATCACTGAGGTTTACAGTG+AGG | - | chr6_2:829195-829214 | Msa0903610:intron | 45.0% | |
| !! | GAAGGTGCCAGCAAATTATC+TGG | + | chr6_2:829400-829419 | None:intergenic | 45.0% |
| CTCAGATCACGATGACCAAA+TGG | + | chr6_2:829436-829455 | None:intergenic | 45.0% | |
| GTCAGCAAGGATACACGAAA+AGG | + | chr6_2:830553-830572 | None:intergenic | 45.0% | |
| !! | TCGTGTATCCTTGCTGACTT+TGG | - | chr6_2:830555-830574 | Msa0903610:intron | 45.0% |
| AAATGACCATCAGTAGCGAG+TGG | + | chr6_2:831518-831537 | None:intergenic | 45.0% | |
| CAAGAACTTGACCTTAGCGT+CGG | - | chr6_2:831647-831666 | Msa0903610:intron | 45.0% | |
| AACAATGTTTGCCGACGCTA+AGG | + | chr6_2:831661-831680 | None:intergenic | 45.0% | |
| TTTCTGATGTAGGCCTAAGC+TGG | - | chr6_2:831835-831854 | Msa0903610:intron | 45.0% | |
| !! | AATCAAGGTTGATGTGGACC+GGG | + | chr6_2:837108-837127 | None:intergenic | 45.0% |
| !!! | ATTTTTTTATTTTATCATTA+GGG | + | chr6_2:833576-833595 | None:intergenic | 5.0% |
| !!! | AATTTTTTTATTTTATCATT+AGG | + | chr6_2:833577-833596 | None:intergenic | 5.0% |
| TCTGAAAATGGAGGTGGCAG+TGG | - | chr6_2:828566-828585 | Msa0903610:three_prime_UTR | 50.0% | |
| GGTGGAGGTGGAGTTGTTAA+TGG | - | chr6_2:828587-828606 | Msa0903610:three_prime_UTR | 50.0% | |
| GGAGGTGGAGTTGTTAATGG+CGG | - | chr6_2:828590-828609 | Msa0903610:three_prime_UTR | 50.0% | |
| GTTTCCAGGACTGACACTCA+TGG | - | chr6_2:828847-828866 | Msa0903610:CDS | 50.0% | |
| !! | TGGTGTCATAGCTGCTGTCA+AGG | - | chr6_2:828867-828886 | Msa0903610:intron | 50.0% |
| ACTCCTCGAGCAAATCACTG+TGG | + | chr6_2:829363-829382 | None:intergenic | 50.0% | |
| AATGGAGCAGGTTGTGTGGA+AGG | + | chr6_2:829418-829437 | None:intergenic | 50.0% | |
| TCCACACAACCTGCTCCATT+TGG | - | chr6_2:829418-829437 | Msa0903610:intron | 50.0% | |
| ACCAAATGGAGCAGGTTGTG+TGG | + | chr6_2:829422-829441 | None:intergenic | 50.0% | |
| TCACGATGACCAAATGGAGC+AGG | + | chr6_2:829430-829449 | None:intergenic | 50.0% | |
| TAACAGGAGAACTACAGGGG+AGG | - | chr6_2:830060-830079 | Msa0903610:intron | 50.0% | |
| ATCGGAATCATCCAAGGTGG+AGG | - | chr6_2:831538-831557 | Msa0903610:CDS | 50.0% | |
| GAACACAAGCATGCGATGGA+TGG | - | chr6_2:831575-831594 | Msa0903610:CDS | 50.0% | |
| CGTCGGCAAACATTGTTCTC+CGG | - | chr6_2:831664-831683 | Msa0903610:intron | 50.0% | |
| GTCGGCAAACATTGTTCTCC+GGG | - | chr6_2:831665-831684 | Msa0903610:intron | 50.0% | |
| ATAGGTAGAAGCTGGTAGCC+CGG | + | chr6_2:831686-831705 | None:intergenic | 50.0% | |
| TCCCGGGTATAAAACGTTCC+TGG | - | chr6_2:832268-832287 | Msa0903610:intron | 50.0% | |
| ! | CCCAGGAACGTTTTATACCC+GGG | + | chr6_2:832272-832291 | None:intergenic | 50.0% |
| CCCGGGTATAAAACGTTCCT+GGG | - | chr6_2:832269-832288 | Msa0903610:intron | 50.0% | |
| TTCCTGAACATGTGCCCTTG+AGG | - | chr6_2:832841-832860 | Msa0903610:intron | 50.0% | |
| TCCTGAACATGTGCCCTTGA+GGG | - | chr6_2:832842-832861 | Msa0903610:intron | 50.0% | |
| ! | AGGCTTTTACCCCTGCCATT+TGG | - | chr6_2:833330-833349 | Msa0903610:intron | 50.0% |
| !! | GGCTTTTACCCCTGCCATTT+GGG | - | chr6_2:833331-833350 | Msa0903610:intron | 50.0% |
| !! | GCTTTTACCCCTGCCATTTG+GGG | - | chr6_2:833332-833351 | Msa0903610:intron | 50.0% |
| !! | CTTTTACCCCTGCCATTTGG+GGG | - | chr6_2:833333-833352 | Msa0903610:intron | 50.0% |
| AAAAGTCCCCCAAATGGCAG+GGG | + | chr6_2:833342-833361 | None:intergenic | 50.0% | |
| CAAAAGTCCCCCAAATGGCA+GGG | + | chr6_2:833343-833362 | None:intergenic | 50.0% | |
| CAACCGTCAAGCAATCTGAC+TGG | - | chr6_2:833429-833448 | Msa0903610:intron | 50.0% | |
| GGGAAGAAGAGAGAAGAGGA+TGG | + | chr6_2:833622-833641 | None:intergenic | 50.0% | |
| GAAGAGAAGGAGAACAGTGG+GGG | + | chr6_2:833642-833661 | None:intergenic | 50.0% | |
| GGAGAAGAGAAGGAGAACAG+TGG | + | chr6_2:833645-833664 | None:intergenic | 50.0% | |
| AGGATGGGATCTGGAGAAGA+TGG | + | chr6_2:833666-833685 | None:intergenic | 50.0% | |
| GTTTCCAGGACTGACACTCA+TGG | - | chr6_2:828847-828866 | Msa0903610:CDS | 50.0% | |
| !! | TGGTGTCATAGCTGCTGTCA+AGG | - | chr6_2:828867-828886 | Msa0903610:intron | 50.0% |
| ACTCCTCGAGCAAATCACTG+TGG | + | chr6_2:829363-829382 | None:intergenic | 50.0% | |
| AATGGAGCAGGTTGTGTGGA+AGG | + | chr6_2:829418-829437 | None:intergenic | 50.0% | |
| TCCACACAACCTGCTCCATT+TGG | - | chr6_2:829418-829437 | Msa0903610:intron | 50.0% | |
| ACCAAATGGAGCAGGTTGTG+TGG | + | chr6_2:829422-829441 | None:intergenic | 50.0% | |
| TCACGATGACCAAATGGAGC+AGG | + | chr6_2:829430-829449 | None:intergenic | 50.0% | |
| TAACAGGAGAACTACAGGGG+AGG | - | chr6_2:830060-830079 | Msa0903610:intron | 50.0% | |
| AGACCGCAATAGAACTCGCA+AGG | + | chr6_2:836097-836116 | None:intergenic | 50.0% | |
| ! | TTTGCAGACGGGTTTCTTGC+TGG | - | chr6_2:836308-836327 | Msa0903610:CDS | 50.0% |
| ATCGGAATCATCCAAGGTGG+AGG | - | chr6_2:831538-831557 | Msa0903610:CDS | 50.0% | |
| CAAAGAACCCAAGCGTGAGA+TGG | - | chr6_2:836549-836568 | Msa0903610:CDS | 50.0% | |
| CATCCATCCATCTCACGCTT+GGG | + | chr6_2:836559-836578 | None:intergenic | 50.0% | |
| ACATCCATCCATCTCACGCT+TGG | + | chr6_2:836560-836579 | None:intergenic | 50.0% | |
| CGTCGGCAAACATTGTTCTC+CGG | - | chr6_2:831664-831683 | Msa0903610:intron | 50.0% | |
| GTCGGCAAACATTGTTCTCC+GGG | - | chr6_2:831665-831684 | Msa0903610:intron | 50.0% | |
| TGTCGTCAGTAGGTAGAAGC+TGG | + | chr6_2:836672-836691 | None:intergenic | 50.0% | |
| AGCTTCTACCTACTGACGAC+AGG | - | chr6_2:836671-836690 | Msa0903610:intron | 50.0% | |
| TTGGTTGACATGTCATGGCC+CGG | - | chr6_2:837087-837106 | Msa0903610:CDS | 50.0% | |
| GAAAATGGAGGTGGCAGTGG+TGG | - | chr6_2:828569-828588 | Msa0903610:three_prime_UTR | 55.0% | |
| GGTGGAGTTGTTAATGGCGG+TGG | - | chr6_2:828593-828612 | Msa0903610:three_prime_UTR | 55.0% | |
| GGAGTTGTTAATGGCGGTGG+AGG | - | chr6_2:828596-828615 | Msa0903610:three_prime_UTR | 55.0% | |
| GACACCATGAGTGTCAGTCC+TGG | + | chr6_2:828854-828873 | None:intergenic | 55.0% | |
| !! | GGACCACAGTGATTTGCTCG+AGG | - | chr6_2:829357-829376 | Msa0903610:CDS | 55.0% |
| ! | AGGGGAGGATTAGCGTACGT+AGG | - | chr6_2:830075-830094 | Msa0903610:intron | 55.0% |
| ! | TTTGCAGACGGGTTCCTTGC+TGG | - | chr6_2:831336-831355 | Msa0903610:CDS | 55.0% |
| TTTCACTCGCGACACCAGCA+AGG | + | chr6_2:831353-831372 | None:intergenic | 55.0% | |
| TCAGAGCCACTCGCTACTGA+TGG | - | chr6_2:831509-831528 | Msa0903610:intron | 55.0% | |
| GTCGTAGCCAGCAATCACTG+TGG | - | chr6_2:831912-831931 | Msa0903610:intron | 55.0% | |
| GTAGCCAGCAATCACTGTGG+AGG | - | chr6_2:831915-831934 | Msa0903610:intron | 55.0% | |
| ACTGCCTCCACAGTGATTGC+TGG | + | chr6_2:831922-831941 | None:intergenic | 55.0% | |
| TTGGTTGACACGTCATGGCC+CGG | - | chr6_2:832109-832128 | Msa0903610:intron | 55.0% | |
| CCAAAAGTCCCCCAAATGGC+AGG | + | chr6_2:833344-833363 | None:intergenic | 55.0% | |
| !! | CCTGCCATTTGGGGGACTTT+TGG | - | chr6_2:833341-833360 | Msa0903610:intron | 55.0% |
| GAGAGAAGAGGATGGATCGC+TGG | + | chr6_2:833614-833633 | None:intergenic | 55.0% | |
| GTGGGGGAAGAAGAGAGAAG+AGG | + | chr6_2:833626-833645 | None:intergenic | 55.0% | |
| GACACCATGAGTGTCAGTCC+TGG | + | chr6_2:828854-828873 | None:intergenic | 55.0% | |
| !! | GGACCACAGTGATTTGCTCG+AGG | - | chr6_2:829357-829376 | Msa0903610:CDS | 55.0% |
| ! | AGGGGAGGATTAGCGTACGT+AGG | - | chr6_2:830075-830094 | Msa0903610:intron | 55.0% |
| TCAGAGCCACTCGCTACTGA+TGG | - | chr6_2:831509-831528 | Msa0903610:intron | 55.0% | |
| GAACCCAAGCGTGAGATGGA+TGG | - | chr6_2:836553-836572 | Msa0903610:CDS | 55.0% | |
| GTAGGTAGAAGCTGGTAGCC+CGG | + | chr6_2:836664-836683 | None:intergenic | 55.0% | |
| GTCGTAGCCAGCAATCACTG+TGG | - | chr6_2:831912-831931 | Msa0903610:intron | 55.0% | |
| GTAGCCAGCAATCACTGTGG+AGG | - | chr6_2:831915-831934 | Msa0903610:intron | 55.0% | |
| ACTGCCTCCACAGTGATTGC+TGG | + | chr6_2:831922-831941 | None:intergenic | 55.0% | |
| AATGGAGGTGGCAGTGGTGG+AGG | - | chr6_2:828572-828591 | Msa0903610:three_prime_UTR | 60.0% | |
| ! | GTGGAGGTGCAAGTACTCCC+AGG | - | chr6_2:828612-828631 | Msa0903610:three_prime_UTR | 60.0% |
| CGAGAGGTTGAACAGCGCTG+AGG | - | chr6_2:830443-830462 | Msa0903610:intron | 60.0% | |
| GTCTTCGTCGTCCTCCACCT+TGG | + | chr6_2:831552-831571 | None:intergenic | 60.0% | |
| TGGAGGCAGTGCGCATGGAT+TGG | - | chr6_2:831932-831951 | Msa0903610:intron | 60.0% | |
| ! | GCCCTCAAGGGCACATGTTC+AGG | + | chr6_2:832846-832865 | None:intergenic | 60.0% |
| CGAGAGGTTGAACAGCGCTG+AGG | - | chr6_2:830443-830462 | Msa0903610:intron | 60.0% | |
| GTCTTCGTCGTCCTCCACCT+TGG | + | chr6_2:831552-831571 | None:intergenic | 60.0% | |
| TGGAGGCAGTGCGCATGGAT+TGG | - | chr6_2:831932-831951 | Msa0903610:intron | 60.0% | |
| GGTGACAAGTCAGCCGTCGC+AGG | - | chr6_2:831881-831900 | Msa0903610:intron | 65.0% | |
| TCAGCCGTCGCAGGTTGCAG+CGG | - | chr6_2:831890-831909 | Msa0903610:intron | 65.0% | |
| ACGACCGCTGCAACCTGCGA+CGG | + | chr6_2:831897-831916 | None:intergenic | 65.0% | |
| CACTGTGGAGGCAGTGCGCA+TGG | - | chr6_2:831927-831946 | Msa0903610:intron | 65.0% | |
| GGTGACAAGTCAGCCGTCGC+AGG | - | chr6_2:831881-831900 | Msa0903610:intron | 65.0% | |
| TCAGCCGTCGCAGGTTGCAG+CGG | - | chr6_2:831890-831909 | Msa0903610:intron | 65.0% | |
| ACGACCGCTGCAACCTGCGA+CGG | + | chr6_2:831897-831916 | None:intergenic | 65.0% | |
| CACTGTGGAGGCAGTGCGCA+TGG | - | chr6_2:831927-831946 | Msa0903610:intron | 65.0% | |
| ! | GGAGGTGGCAGTGGTGGAGG+TGG | - | chr6_2:828575-828594 | Msa0903610:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 828566 | 837132 | 828566 | ID=Msa0903610;Name=Msa0903610 |
| chr6_2 | mRNA | 828566 | 837132 | 828566 | ID=Msa0903610-mRNA-1;Parent=Msa0903610;Name=Msa0903610-mRNA-1;_AED=0.28;_eAED=0.32;_QI=0|0.22|0.1|1|0.77|0.7|10|148|459 |
| chr6_2 | exon | 828566 | 828873 | 828566 | ID=Msa0903610-mRNA-1:exon:402;Parent=Msa0903610-mRNA-1 |
| chr6_2 | exon | 829006 | 829207 | 829006 | ID=Msa0903610-mRNA-1:exon:401;Parent=Msa0903610-mRNA-1 |
| chr6_2 | exon | 829354 | 829383 | 829354 | ID=Msa0903610-mRNA-1:exon:400;Parent=Msa0903610-mRNA-1 |
| chr6_2 | exon | 829470 | 829545 | 829470 | ID=Msa0903610-mRNA-1:exon:399;Parent=Msa0903610-mRNA-1 |
| chr6_2 | exon | 830187 | 830323 | 830187 | ID=Msa0903610-mRNA-1:exon:398;Parent=Msa0903610-mRNA-1 |
| chr6_2 | exon | 831134 | 831368 | 831134 | ID=Msa0903610-mRNA-1:exon:397;Parent=Msa0903610-mRNA-1 |
| chr6_2 | exon | 831510 | 831608 | 831510 | ID=Msa0903610-mRNA-1:exon:396;Parent=Msa0903610-mRNA-1 |
| chr6_2 | exon | 836176 | 836358 | 836176 | ID=Msa0903610-mRNA-1:exon:395;Parent=Msa0903610-mRNA-1 |
| chr6_2 | exon | 836482 | 836580 | 836482 | ID=Msa0903610-mRNA-1:exon:394;Parent=Msa0903610-mRNA-1 |
| chr6_2 | exon | 836974 | 837132 | 836974 | ID=Msa0903610-mRNA-1:exon:393;Parent=Msa0903610-mRNA-1 |
| chr6_2 | CDS | 836974 | 837132 | 836974 | ID=Msa0903610-mRNA-1:cds;Parent=Msa0903610-mRNA-1 |
| chr6_2 | CDS | 836482 | 836580 | 836482 | ID=Msa0903610-mRNA-1:cds;Parent=Msa0903610-mRNA-1 |
| chr6_2 | CDS | 836176 | 836358 | 836176 | ID=Msa0903610-mRNA-1:cds;Parent=Msa0903610-mRNA-1 |
| chr6_2 | CDS | 831510 | 831608 | 831510 | ID=Msa0903610-mRNA-1:cds;Parent=Msa0903610-mRNA-1 |
| chr6_2 | CDS | 831134 | 831368 | 831134 | ID=Msa0903610-mRNA-1:cds;Parent=Msa0903610-mRNA-1 |
| chr6_2 | CDS | 830187 | 830323 | 830187 | ID=Msa0903610-mRNA-1:cds;Parent=Msa0903610-mRNA-1 |
| chr6_2 | CDS | 829470 | 829545 | 829470 | ID=Msa0903610-mRNA-1:cds;Parent=Msa0903610-mRNA-1 |
| chr6_2 | CDS | 829354 | 829383 | 829354 | ID=Msa0903610-mRNA-1:cds;Parent=Msa0903610-mRNA-1 |
| chr6_2 | CDS | 829006 | 829207 | 829006 | ID=Msa0903610-mRNA-1:cds;Parent=Msa0903610-mRNA-1 |
| chr6_2 | CDS | 828714 | 828873 | 828714 | ID=Msa0903610-mRNA-1:cds;Parent=Msa0903610-mRNA-1 |
| chr6_2 | three_prime_UTR | 828566 | 828713 | 828566 | ID=Msa0903610-mRNA-1:three_prime_utr;Parent=Msa0903610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
