AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0903860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0903860 MtrunA17_Chr6g0452271 93.023 344 16 2 1 344 1 336 0.0 619
Msa0903860 MtrunA17_Chr3g0103281 66.423 137 46 0 1 137 1 137 6.90e-66 211
Msa0903860 MtrunA17_Chr5g0410961 49.756 205 92 3 1 198 1 201 3.55e-64 207
Msa0903860 MtrunA17_Chr4g0039971 49.206 189 85 2 1 182 2 186 1.49e-63 206
Msa0903860 MtrunA17_Chr1g0151941 60.897 156 56 4 1 154 1 153 7.59e-63 200
Msa0903860 MtrunA17_Chr6g0453471 66.406 128 43 0 1 128 1 128 1.18e-62 203
Msa0903860 MtrunA17_Chr3g0115821 55.195 154 66 1 1 151 1 154 3.80e-62 202
Msa0903860 MtrunA17_Chr4g0048511 62.857 140 50 2 1 139 1 139 4.53e-62 202
Msa0903860 MtrunA17_Chr7g0217741 62.406 133 50 0 1 133 1 133 5.92e-62 200
Msa0903860 MtrunA17_Chr2g0281071 65.116 129 44 1 1 128 1 129 2.46e-61 199
Msa0903860 MtrunA17_Chr2g0323411 59.859 142 57 0 1 142 1 142 1.02e-60 197
Msa0903860 MtrunA17_Chr4g0037141 60.606 132 52 0 1 132 1 132 1.87e-59 192
Msa0903860 MtrunA17_Chr1g0193371 56.522 161 66 2 1 161 1 157 9.49e-59 193
Msa0903860 MtrunA17_Chr4g0057031 62.595 131 49 0 1 131 1 131 2.21e-58 189
Msa0903860 MtrunA17_Chr4g0042671 56.291 151 57 1 1 142 1 151 3.07e-58 193
Msa0903860 MtrunA17_Chr7g0270891 62.121 132 50 0 1 132 1 132 5.53e-58 191
Msa0903860 MtrunA17_Chr1g0193801 60.606 132 52 0 1 132 1 132 8.84e-58 191
Msa0903860 MtrunA17_Chr4g0058631 54.362 149 68 0 1 149 1 149 9.68e-58 191
Msa0903860 MtrunA17_Chr3g0117091 59.559 136 55 0 1 136 1 136 1.31e-57 190
Msa0903860 MtrunA17_Chr7g0228891 61.832 131 50 0 1 131 1 131 3.98e-57 186
Msa0903860 MtrunA17_Chr1g0211161 60.630 127 50 0 3 129 4 130 1.57e-56 183
Msa0903860 MtrunA17_Chr5g0395281 54.225 142 65 0 1 142 1 142 2.39e-56 185
Msa0903860 MtrunA17_Chr4g0028311 63.281 128 46 1 1 127 1 128 4.49e-56 185
Msa0903860 MtrunA17_Chr7g0264641 65.833 120 40 1 1 119 1 120 4.75e-56 184
Msa0903860 MtrunA17_Chr1g0152011 46.535 202 84 5 1 187 1 193 1.40e-55 184
Msa0903860 MtrunA17_Chr5g0435101 51.974 152 72 1 3 154 2 152 2.29e-55 180
Msa0903860 MtrunA17_Chr3g0110351 60.902 133 52 0 1 133 1 133 2.85e-55 183
Msa0903860 MtrunA17_Chr2g0309911 61.600 125 48 0 6 130 5 129 4.38e-55 182
Msa0903860 MtrunA17_Chr5g0434571 60.769 130 51 0 1 130 37 166 7.11e-55 183
Msa0903860 MtrunA17_Chr8g0349261 59.848 132 51 2 1 130 1 132 9.56e-55 181
Msa0903860 MtrunA17_Chr8g0385321 56.818 132 57 0 1 132 1 132 2.53e-54 180
Msa0903860 MtrunA17_Chr5g0400821 64.407 118 41 1 1 117 1 118 2.66e-54 180
Msa0903860 MtrunA17_Chr3g0135311 65.254 118 40 1 1 117 1 118 9.39e-54 180
Msa0903860 MtrunA17_Chr3g0131121 56.923 130 56 0 1 130 1 130 1.63e-53 178
Msa0903860 MtrunA17_Chr7g0217221 63.559 118 43 0 1 118 1 118 1.89e-52 174
Msa0903860 MtrunA17_Chr2g0330041 48.588 177 76 2 1 162 1 177 2.15e-52 178
Msa0903860 MtrunA17_Chr4g0054391 69.091 110 33 1 1 109 1 110 3.96e-52 174
Msa0903860 MtrunA17_Chr7g0271241 54.375 160 72 1 1 159 1 160 4.49e-52 176
Msa0903860 MtrunA17_Chr8g0387421 60.169 118 47 0 1 118 1 118 5.11e-52 174
Msa0903860 MtrunA17_Chr2g0327351 65.766 111 37 1 1 110 1 111 1.35e-51 173
Msa0903860 MtrunA17_Chr3g0121241 59.200 125 51 0 5 129 35 159 1.37e-51 173
Msa0903860 MtrunA17_Chr7g0275911 62.931 116 43 0 1 116 1 116 2.75e-51 171
Msa0903860 MtrunA17_Chr5g0397231 63.636 110 40 0 1 110 1 110 3.06e-51 173
Msa0903860 MtrunA17_Chr7g0254411 58.400 125 50 1 1 123 1 125 9.81e-51 172
Msa0903860 MtrunA17_Chr1g0203411 61.207 116 45 0 1 116 1 116 1.58e-50 170
Msa0903860 MtrunA17_Chr8g0342521 33.636 330 206 8 1 324 1 323 1.83e-50 171
Msa0903860 MtrunA17_Chr8g0342541 53.521 142 65 1 1 142 1 141 6.45e-50 170
Msa0903860 MtrunA17_Chr4g0072751 64.865 111 38 1 1 110 1 111 1.20e-49 169
Msa0903860 MtrunA17_Chr1g0187761 62.069 116 44 0 1 116 1 116 3.32e-49 165
Msa0903860 MtrunA17_Chr8g0346561 61.017 118 46 0 1 118 1 118 3.88e-49 166
Msa0903860 MtrunA17_Chr4g0060721 57.627 118 50 0 1 118 2 119 4.23e-49 167
Msa0903860 MtrunA17_Chr3g0092401 59.664 119 48 0 1 119 2 120 4.27e-49 167
Msa0903860 MtrunA17_Chr1g0167691 50.314 159 74 2 1 154 1 159 1.44e-48 164
Msa0903860 MtrunA17_Chr2g0323351 59.322 118 48 0 1 118 1 118 1.66e-48 163
Msa0903860 MtrunA17_Chr4g0068061 45.251 179 87 3 1 168 1 179 2.45e-48 166
Msa0903860 MtrunA17_Chr7g0261281 58.621 116 48 0 1 116 1 116 4.93e-48 163
Msa0903860 MtrunA17_Chr2g0311221 64.220 109 39 0 2 110 4 112 2.10e-47 163
Msa0903860 MtrunA17_Chr4g0022931 59.829 117 46 1 1 116 1 117 2.40e-47 161
Msa0903860 MtrunA17_Chr7g0274581 54.237 118 54 0 1 118 1 118 4.27e-47 158
Msa0903860 MtrunA17_Chr4g0044421 56.349 126 55 0 1 126 1 126 6.08e-47 157
Msa0903860 MtrunA17_Chr4g0070611 59.483 116 47 0 1 116 1 116 6.45e-47 161
Msa0903860 MtrunA17_Chr4g0070641 59.483 116 47 0 1 116 1 116 1.42e-46 155
Msa0903860 MtrunA17_Chr4g0022901 58.475 118 48 1 1 117 1 118 1.91e-46 159
Msa0903860 MtrunA17_Chr1g0167661 56.410 117 51 0 1 117 1 117 3.40e-46 157
Msa0903860 MtrunA17_Chr6g0487491 59.524 126 42 2 1 117 1 126 3.99e-46 157
Msa0903860 MtrunA17_Chr5g0417821 55.462 119 53 0 12 130 7 125 4.80e-46 158
Msa0903860 MtrunA17_Chr4g0022911 55.932 118 51 1 1 117 1 118 2.08e-45 156
Msa0903860 MtrunA17_Chr8g0342481 58.475 118 48 1 1 117 1 118 2.79e-45 159
Msa0903860 MtrunA17_Chr6g0453211 40.580 207 91 2 1 207 1 175 6.75e-45 156
Msa0903860 MtrunA17_Chr3g0088461 57.798 109 46 0 8 116 18 126 8.62e-44 154
Msa0903860 MtrunA17_Chr2g0328771 56.481 108 47 0 12 119 20 127 6.98e-43 150
Msa0903860 MtrunA17_Chr4g0022891 50.000 136 64 1 1 132 1 136 1.27e-42 148
Msa0903860 MtrunA17_Chr1g0194951 51.562 128 62 0 1 128 1 128 3.81e-42 150
Msa0903860 MtrunA17_Chr1g0203441 53.488 129 56 3 1 127 1 127 1.07e-41 146
Msa0903860 MtrunA17_Chr4g0032401 33.569 283 165 4 12 294 17 276 3.45e-41 147
Msa0903860 MtrunA17_Chr7g0228231 57.547 106 45 0 11 116 13 118 7.25e-41 142
Msa0903860 MtrunA17_Chr4g0022881 51.754 114 55 0 1 114 1 114 1.35e-40 142
Msa0903860 MtrunA17_Chr7g0247131 63.736 91 33 0 44 134 10 100 2.41e-40 142
Msa0903860 MtrunA17_Chr3g0093811 34.323 303 148 7 44 344 14 267 4.65e-40 142
Msa0903860 MtrunA17_Chr6g0470971 48.175 137 70 1 9 145 11 146 4.66e-40 142
Msa0903860 MtrunA17_Chr1g0209661 48.760 121 62 0 12 132 27 147 8.60e-40 142
Msa0903860 MtrunA17_Chr6g0450101 51.240 121 57 1 1 119 1 121 9.55e-40 139
Msa0903860 MtrunA17_Chr3g0099131 56.190 105 46 0 11 115 40 144 5.86e-39 145
Msa0903860 MtrunA17_Chr7g0269831 56.897 116 50 0 1 116 1 116 6.86e-39 141
Msa0903860 MtrunA17_Chr4g0055981 50.394 127 63 0 9 135 52 178 3.41e-38 136
Msa0903860 MtrunA17_Chr3g0080861 57.692 104 44 0 12 115 37 140 4.45e-38 142
Msa0903860 MtrunA17_Chr8g0343831 57.009 107 46 0 12 118 8 114 4.75e-38 136
Msa0903860 MtrunA17_Chr5g0434931 55.660 106 47 0 12 117 35 140 5.46e-38 137
Msa0903860 MtrunA17_Chr5g0434911 54.054 111 51 0 7 117 16 126 6.07e-38 136
Msa0903860 MtrunA17_Chr1g0168661 56.311 103 45 0 13 115 22 124 5.45e-37 134
Msa0903860 MtrunA17_Chr1g0186061 56.311 103 45 0 13 115 21 123 1.06e-36 133
Msa0903860 MtrunA17_Chr7g0240821 48.551 138 68 1 17 151 6 143 1.47e-36 131
Msa0903860 MtrunA17_Chr4g0042611 59.091 88 36 0 1 88 1 88 2.00e-36 127
Msa0903860 MtrunA17_Chr5g0434831 54.717 106 48 0 12 117 7 112 3.38e-36 129
Msa0903860 MtrunA17_Chr1g0180391 52.830 106 50 0 11 116 18 123 3.99e-36 130
Msa0903860 MtrunA17_Chr1g0194301 49.565 115 58 0 8 122 29 143 4.33e-36 132
Msa0903860 MtrunA17_Chr8g0354661 54.808 104 47 0 12 115 37 140 4.36e-36 137
Msa0903860 MtrunA17_Chr7g0220341 54.630 108 47 1 12 117 25 132 7.96e-36 131
Msa0903860 MtrunA17_Chr1g0194291 49.565 115 58 0 8 122 17 131 1.20e-35 130
Msa0903860 MtrunA17_Chr7g0228991 54.717 106 48 0 12 117 29 134 1.67e-35 130
Msa0903860 MtrunA17_Chr2g0327821 52.885 104 49 0 12 115 6 109 2.93e-35 128
Msa0903860 MtrunA17_Chr5g0434841 53.774 106 49 0 12 117 20 125 3.54e-35 130
Msa0903860 MtrunA17_Chr1g0192411 51.754 114 54 1 8 121 8 120 6.04e-35 132
Msa0903860 MtrunA17_Chr2g0322521 54.206 107 49 0 9 115 26 132 2.65e-34 130
Msa0903860 MtrunA17_Chr5g0440781 48.276 116 58 2 10 124 10 124 3.94e-34 124
Msa0903860 MtrunA17_Chr1g0154031 52.885 104 49 0 12 115 76 179 5.13e-34 129
Msa0903860 MtrunA17_Chr8g0360111 54.455 101 46 0 12 112 25 125 7.42e-34 125
Msa0903860 MtrunA17_Chr8g0342511 59.302 86 35 0 1 86 1 86 7.85e-34 120
Msa0903860 MtrunA17_Chr5g0441141 48.276 116 58 2 10 124 10 124 3.37e-33 124
Msa0903860 MtrunA17_Chr5g0440761 48.276 116 58 2 10 124 10 124 3.55e-33 124
Msa0903860 MtrunA17_Chr8g0342531 57.303 89 38 0 1 89 1 89 4.22e-33 120
Msa0903860 MtrunA17_Chr2g0293911 50.435 115 57 0 8 122 20 134 5.36e-33 125
Msa0903860 MtrunA17_Chr4g0030881 50.000 110 48 1 13 115 8 117 9.92e-33 122
Msa0903860 MtrunA17_Chr4g0068921 52.336 107 51 0 8 114 20 126 7.33e-32 118
Msa0903860 MtrunA17_Chr2g0294811 53.763 93 42 1 1 93 1 92 1.69e-31 115
Msa0903860 MtrunA17_Chr8g0342461 55.556 90 39 1 1 89 1 90 2.41e-30 112
Msa0903860 MtrunA17_Chr5g0441131 46.552 116 60 2 10 124 7 121 2.48e-30 114
Msa0903860 MtrunA17_Chr2g0323321 54.348 92 41 1 1 92 1 91 5.96e-30 110
Msa0903860 MtrunA17_Chr8g0342471 55.556 90 39 1 1 89 1 90 7.04e-30 111
Msa0903860 MtrunA17_Chr5g0429661 31.776 214 126 4 14 216 122 326 8.41e-30 117
Msa0903860 MtrunA17_Chr5g0401731 42.975 121 68 1 14 134 15 134 3.42e-29 114
Msa0903860 MtrunA17_Chr5g0395221 53.571 84 39 0 5 88 5 88 5.65e-29 107
Msa0903860 MtrunA17_Chr3g0099141 53.488 86 40 0 8 93 36 121 1.02e-28 108
Msa0903860 MtrunA17_Chr8g0334881 46.018 113 59 2 8 119 6 117 2.60e-28 112
Msa0903860 MtrunA17_Chr4g0013361 42.222 135 74 3 8 141 6 137 2.06e-27 109
Msa0903860 MtrunA17_Chr4g0008551 36.025 161 98 2 14 174 38 193 2.81e-27 110
Msa0903860 MtrunA17_Chr6g0454921 45.045 111 60 1 14 124 15 124 4.24e-27 106
Msa0903860 MtrunA17_Chr4g0053431 45.098 102 55 1 14 115 5 105 7.71e-27 107
Msa0903860 MtrunA17_Chr4g0058991 45.455 110 59 1 9 118 204 312 4.01e-26 108
Msa0903860 MtrunA17_Chr3g0117511 42.727 110 62 1 9 118 178 286 1.23e-25 106
Msa0903860 MtrunA17_Chr6g0480581 42.500 120 64 3 14 129 4 122 1.74e-25 102
Msa0903860 MtrunA17_Chr7g0229101 62.857 70 26 0 44 113 4 73 1.98e-25 101
Msa0903860 MtrunA17_Chr5g0434901 64.706 68 24 0 46 113 7 74 2.70e-25 98.6
Msa0903860 MtrunA17_Chr3g0133601 43.519 108 60 1 8 115 31 137 3.15e-25 101
Msa0903860 MtrunA17_Chr7g0238631 48.544 103 52 1 14 116 113 214 8.04e-25 105
Msa0903860 MtrunA17_Chr7g0229131 56.757 74 32 0 44 117 4 77 2.25e-24 97.8
Msa0903860 MtrunA17_Chr6g0460661 40.594 101 59 1 10 110 12 111 1.99e-23 95.1
Msa0903860 MtrunA17_Chr5g0417621 44.660 103 56 1 14 116 134 235 4.80e-23 99.4
Msa0903860 MtrunA17_Chr7g0228531 42.593 108 60 2 11 118 217 322 8.02e-23 98.6
Msa0903860 MtrunA17_Chr4g0042501 44.118 102 56 1 14 115 105 205 1.73e-22 97.4
Msa0903860 MtrunA17_Chr5g0425591 48.235 85 43 1 10 93 7 91 1.89e-22 90.1
Msa0903860 MtrunA17_Chr5g0437321 42.424 99 56 1 14 112 19 116 2.69e-22 95.1
Msa0903860 MtrunA17_Chr3g0139671 40.777 103 60 1 14 116 85 186 1.27e-20 93.2
Msa0903860 MtrunA17_Chr3g0125801 35.526 152 96 2 8 159 10 159 2.75e-20 89.7
Msa0903860 MtrunA17_Chr7g0228401 36.923 130 56 3 8 113 250 377 4.04e-20 91.3
Msa0903860 MtrunA17_Chr6g0453751 44.565 92 42 2 11 93 19 110 5.41e-20 84.7
Msa0903860 MtrunA17_Chr7g0254261 37.778 135 81 2 14 148 89 220 1.12e-19 89.0
Msa0903860 MtrunA17_Chr6g0460671 42.157 102 58 1 14 115 99 199 2.60e-19 87.8
Msa0903860 MtrunA17_Chr1g0157731 38.835 103 62 1 14 116 91 192 2.96e-19 89.4
Msa0903860 MtrunA17_Chr1g0177901 43.956 91 47 2 23 113 6 92 6.74e-19 84.0
Msa0903860 MtrunA17_Chr7g0228481 38.835 103 61 2 11 113 217 317 1.11e-18 86.7
Msa0903860 MtrunA17_Chr5g0397841 42.857 98 54 2 12 109 109 204 3.39e-18 85.5
Msa0903860 MtrunA17_Chr7g0238651 40.404 99 57 1 14 110 7 105 9.92e-18 83.2
Msa0903860 MtrunA17_Chr7g0233061 36.207 116 59 3 10 119 176 282 1.86e-16 79.3
Msa0903860 MtrunA17_Chr5g0395231 58.824 51 21 0 78 128 5 55 3.37e-16 77.0
Msa0903860 MtrunA17_Chr8g0362231 37.719 114 69 2 17 130 25 136 1.52e-15 77.4
Msa0903860 MtrunA17_Chr5g0416341 37.374 99 61 1 17 115 29 126 8.60e-15 75.1
Msa0903860 MtrunA17_Chr3g0104491 41.414 99 49 4 53 144 1 97 9.31e-15 73.6
Msa0903860 MtrunA17_Chr3g0145551 70.000 40 12 0 92 131 2 41 2.18e-14 67.8
Msa0903860 MtrunA17_Chr1g0193901 52.308 65 28 2 5 66 2 66 3.14e-14 68.2
Msa0903860 MtrunA17_Chr1g0193891 52.308 65 28 2 5 66 2 66 3.14e-14 68.2
Msa0903860 MtrunA17_Chr1g0193871 52.308 65 28 2 5 66 2 66 3.14e-14 68.2
Msa0903860 MtrunA17_Chr1g0193881 52.308 65 28 2 5 66 2 66 3.14e-14 68.2
Msa0903860 MtrunA17_Chr4g0042621 52.381 63 21 1 89 142 15 77 3.48e-14 72.4
Msa0903860 MtrunA17_Chr5g0434871 61.364 44 17 0 74 117 2 45 8.16e-14 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0903860 AT3G28470.1 46.196 368 123 11 1 344 1 317 1.18e-84 259
Msa0903860 AT5G56110.1 64.626 147 46 1 1 147 1 141 6.79e-67 213
Msa0903860 AT5G16770.4 52.542 177 83 1 1 177 1 176 1.30e-64 207
Msa0903860 AT5G16770.3 52.542 177 83 1 1 177 1 176 1.30e-64 207
Msa0903860 AT5G16770.1 52.542 177 83 1 1 177 1 176 3.50e-64 207
Msa0903860 AT5G16770.2 52.542 177 83 1 1 177 1 176 3.50e-64 207
Msa0903860 AT5G15310.4 50.259 193 86 4 1 184 1 192 3.81e-64 204
Msa0903860 AT5G15310.2 50.259 193 86 4 1 184 1 192 7.06e-64 206
Msa0903860 AT5G15310.1 50.259 193 86 4 1 184 1 192 7.31e-64 206
Msa0903860 AT3G02940.2 65.625 128 44 0 1 128 1 128 1.91e-63 204
Msa0903860 AT3G02940.1 65.625 128 44 0 1 128 1 128 4.03e-63 204
Msa0903860 AT3G02940.3 65.625 128 44 0 1 128 1 128 4.03e-63 204
Msa0903860 AT3G01140.2 64.179 134 48 0 1 134 1 134 4.92e-63 204
Msa0903860 AT4G21440.1 52.841 176 77 2 1 174 1 172 1.62e-62 203
Msa0903860 AT4G05100.1 66.667 129 42 1 1 128 1 129 5.65e-62 201
Msa0903860 AT5G10280.1 48.370 184 93 1 1 184 1 182 2.16e-61 199
Msa0903860 AT4G28110.1 64.844 128 45 0 1 128 1 128 7.42e-61 197
Msa0903860 AT1G09540.1 62.687 134 50 0 1 134 1 134 2.94e-60 197
Msa0903860 AT1G57560.1 49.730 185 81 2 1 185 1 173 2.96e-60 196
Msa0903860 AT1G34670.1 57.343 143 61 0 1 143 1 143 3.59e-60 197
Msa0903860 AT3G01140.1 63.846 130 47 0 5 134 48 177 7.48e-60 197
Msa0903860 AT5G26660.1 63.566 129 47 0 1 129 1 129 3.53e-59 194
Msa0903860 AT1G57560.2 61.832 131 50 0 1 131 1 131 3.88e-59 192
Msa0903860 AT4G12350.1 47.872 188 93 2 1 188 1 183 7.62e-59 191
Msa0903860 AT4G34990.1 48.315 178 89 1 1 178 1 175 1.59e-58 190
Msa0903860 AT4G38620.1 60.305 131 52 0 1 131 1 131 2.10e-58 190
Msa0903860 AT5G65230.1 59.398 133 54 0 1 133 1 133 3.60e-58 191
Msa0903860 AT2G16720.1 44.681 188 87 3 1 171 1 188 7.59e-58 188
Msa0903860 AT4G22680.1 52.469 162 77 0 1 162 1 162 1.01e-57 188
Msa0903860 AT4G17785.2 54.248 153 69 1 1 152 1 153 1.45e-57 190
Msa0903860 AT3G61250.1 59.690 129 52 0 1 129 1 129 1.90e-57 188
Msa0903860 AT5G61420.2 58.462 130 54 0 1 130 1 130 2.51e-57 190
Msa0903860 AT4G17785.1 54.248 153 69 1 1 152 1 153 2.60e-57 190
Msa0903860 AT4G01680.3 59.848 132 53 0 1 132 1 132 1.64e-56 184
Msa0903860 AT4G09460.1 57.252 131 56 0 1 131 1 131 4.13e-56 183
Msa0903860 AT4G01680.1 59.848 132 53 0 1 132 1 132 7.52e-56 185
Msa0903860 AT5G60890.1 58.140 129 54 0 1 129 1 129 8.49e-56 184
Msa0903860 AT5G07690.1 57.692 130 55 0 1 130 1 130 1.26e-55 185
Msa0903860 AT1G66230.1 60.606 132 52 0 1 132 1 132 1.77e-55 183
Msa0903860 AT1G22640.1 56.391 133 58 0 1 133 1 133 3.36e-55 181
Msa0903860 AT3G49690.1 66.102 118 39 1 1 117 1 118 4.80e-55 182
Msa0903860 AT5G54230.1 55.479 146 61 1 1 146 1 142 1.52e-54 181
Msa0903860 AT1G18570.1 59.542 131 52 1 1 130 1 131 3.15e-54 182
Msa0903860 AT5G07700.1 57.692 130 55 0 1 130 1 130 3.39e-54 181
Msa0903860 AT5G07700.2 57.692 130 55 0 1 130 1 130 3.39e-54 181
Msa0903860 AT5G57620.1 64.407 118 41 1 1 117 1 118 3.72e-54 181
Msa0903860 AT5G23000.1 66.949 118 38 1 1 117 1 118 6.09e-54 180
Msa0903860 AT1G35515.1 56.589 129 56 0 1 129 1 129 6.51e-54 176
Msa0903860 AT2G36890.1 62.992 127 46 1 1 126 1 127 7.51e-54 179
Msa0903860 AT2G36890.2 62.992 127 46 1 1 126 42 168 1.05e-53 180
Msa0903860 AT1G63910.1 47.159 176 74 1 1 157 1 176 1.46e-53 180
Msa0903860 AT5G14340.1 57.576 132 56 0 1 132 13 144 1.88e-53 177
Msa0903860 AT5G16600.1 58.779 131 54 0 1 131 1 131 2.26e-53 179
Msa0903860 AT5G65790.1 65.254 118 40 1 1 117 1 118 2.96e-53 180
Msa0903860 AT3G13540.1 59.200 125 51 0 5 129 16 140 1.23e-52 174
Msa0903860 AT3G12720.1 61.157 121 47 0 6 126 16 136 1.29e-52 176
Msa0903860 AT4G01680.2 54.861 144 53 1 1 132 1 144 1.92e-52 177
Msa0903860 AT1G74430.1 55.385 130 58 0 1 130 1 130 3.83e-52 174
Msa0903860 AT2G31180.1 50.595 168 69 2 1 157 1 165 3.88e-52 173
Msa0903860 AT3G23250.1 61.207 116 45 0 1 116 1 116 7.17e-52 174
Msa0903860 AT3G13890.2 56.835 139 60 0 1 139 1 139 9.62e-52 175
Msa0903860 AT3G47600.1 61.345 119 46 0 1 119 1 119 1.98e-51 174
Msa0903860 AT4G37780.1 61.864 118 44 1 1 117 1 118 2.32e-51 173
Msa0903860 AT1G74080.1 56.589 129 56 0 1 129 1 129 2.66e-51 173
Msa0903860 AT1G08810.1 61.017 118 46 0 1 118 1 118 6.02e-51 171
Msa0903860 AT5G62320.1 56.204 137 53 1 2 131 3 139 1.35e-50 169
Msa0903860 AT1G74650.1 60.504 119 47 0 1 119 1 119 2.79e-50 171
Msa0903860 AT1G18710.1 53.488 129 60 0 1 129 1 129 3.44e-50 169
Msa0903860 AT5G62470.2 59.664 119 48 0 1 119 1 119 4.48e-50 171
Msa0903860 AT3G28910.1 59.836 122 49 0 1 122 1 122 2.13e-49 168
Msa0903860 AT2G47460.1 56.391 133 58 0 1 133 1 133 4.23e-49 169
Msa0903860 AT1G79180.1 60.684 117 46 0 2 118 4 120 4.32e-49 166
Msa0903860 AT3G13890.1 53.378 148 60 1 1 139 1 148 1.14e-48 167
Msa0903860 AT1G06180.1 59.483 116 47 0 1 116 1 116 1.44e-48 164
Msa0903860 AT5G62470.1 59.664 119 47 1 1 119 1 118 1.90e-48 166
Msa0903860 AT1G16490.1 58.261 115 48 0 2 116 4 118 1.02e-47 162
Msa0903860 AT5G49330.1 58.621 116 48 0 1 116 1 116 1.04e-46 162
Msa0903860 AT3G62610.1 57.759 116 49 0 1 116 1 116 1.36e-46 161
Msa0903860 AT1G56160.1 57.391 115 49 0 2 116 4 118 1.41e-45 157
Msa0903860 AT5G14750.1 52.667 150 66 3 13 161 17 162 2.14e-45 154
Msa0903860 AT5G12870.1 60.185 108 43 0 12 119 18 125 2.31e-45 156
Msa0903860 AT3G08500.1 41.935 186 96 1 8 181 26 211 4.33e-44 155
Msa0903860 AT5G52600.1 54.615 130 50 1 9 129 9 138 4.72e-44 150
Msa0903860 AT3G12820.1 57.759 116 49 0 3 118 5 120 6.63e-44 151
Msa0903860 AT3G27920.1 61.905 105 40 0 13 117 15 119 5.35e-43 149
Msa0903860 AT5G40330.1 50.676 148 71 2 13 160 13 158 6.42e-43 148
Msa0903860 AT1G79180.2 47.297 148 45 1 2 116 4 151 1.36e-42 150
Msa0903860 AT5G40350.1 44.848 165 74 3 12 159 17 181 2.33e-41 144
Msa0903860 AT4G25560.1 57.547 106 45 0 13 118 11 116 8.48e-41 144
Msa0903860 AT5G35550.1 55.455 110 49 0 9 118 11 120 4.63e-40 142
Msa0903860 AT2G32460.2 57.692 104 44 0 12 115 6 109 1.31e-39 146
Msa0903860 AT2G32460.1 57.692 104 44 0 12 115 18 121 1.49e-39 146
Msa0903860 AT4G26930.1 56.364 110 47 1 12 121 19 127 2.84e-39 143
Msa0903860 AT3G27810.1 55.238 105 47 0 12 116 20 124 3.03e-39 139
Msa0903860 AT3G01530.1 55.238 105 47 0 12 116 25 129 6.76e-39 137
Msa0903860 AT1G48000.1 44.444 144 72 2 12 147 32 175 7.37e-39 138
Msa0903860 AT1G18960.1 33.237 346 162 11 17 344 13 307 8.80e-39 140
Msa0903860 AT5G55020.1 57.273 110 46 1 12 121 26 134 1.56e-38 144
Msa0903860 AT1G25340.1 49.180 122 62 0 13 134 19 140 1.79e-38 139
Msa0903860 AT2G26960.1 48.551 138 69 2 9 146 17 152 3.77e-38 141
Msa0903860 AT5G26660.2 66.667 87 29 0 43 129 12 98 6.00e-38 138
Msa0903860 AT3G48920.1 52.830 106 50 0 9 114 15 120 1.60e-37 135
Msa0903860 AT4G13480.1 58.252 103 43 0 13 115 7 109 2.22e-37 135
Msa0903860 AT5G52260.1 56.364 110 48 0 9 118 9 118 2.70e-37 135
Msa0903860 AT1G68320.1 39.024 205 104 3 12 208 19 210 5.15e-37 135
Msa0903860 AT3G11440.2 51.402 107 52 0 9 115 38 144 6.79e-37 138
Msa0903860 AT3G24310.1 57.282 103 44 0 13 115 19 121 1.02e-36 133
Msa0903860 AT3G30210.1 56.863 102 44 0 13 114 28 129 2.20e-36 133
Msa0903860 AT3G11440.3 51.402 107 52 0 9 115 38 144 2.22e-36 138
Msa0903860 AT3G11440.4 51.402 107 52 0 9 115 38 144 2.22e-36 138
Msa0903860 AT3G11440.1 51.402 107 52 0 9 115 38 144 2.22e-36 138
Msa0903860 AT5G06100.1 52.778 108 51 0 8 115 28 135 2.60e-36 136
Msa0903860 AT5G06100.5 52.778 108 51 0 8 115 28 135 8.07e-36 136
Msa0903860 AT5G06100.2 52.778 108 51 0 8 115 28 135 8.07e-36 136
Msa0903860 AT5G06100.3 52.778 108 51 0 8 115 28 135 8.07e-36 136
Msa0903860 AT5G06100.4 52.778 108 51 0 8 115 28 135 8.07e-36 136
Msa0903860 AT2G47190.1 46.218 119 64 0 4 122 12 130 1.54e-34 128
Msa0903860 AT5G59780.3 53.398 103 48 0 13 115 9 111 6.04e-34 125
Msa0903860 AT1G25340.2 46.721 122 60 1 13 134 19 135 6.88e-34 126
Msa0903860 AT1G25340.3 46.721 122 60 1 13 134 19 135 1.32e-33 126
Msa0903860 AT3G46130.1 52.427 103 49 0 13 115 10 112 1.38e-33 125
Msa0903860 AT1G66370.1 50.435 115 53 1 1 115 1 111 1.84e-33 124
Msa0903860 AT3G06490.1 51.304 115 56 0 8 122 15 129 1.52e-32 124
Msa0903860 AT1G66380.1 54.808 104 47 0 12 115 8 111 1.09e-31 116
Msa0903860 AT5G49620.1 49.565 115 58 0 8 122 22 136 3.18e-31 120
Msa0903860 AT1G56650.1 43.972 141 69 1 12 152 8 138 6.18e-31 117
Msa0903860 AT5G14750.3 48.571 140 58 6 23 161 2 128 1.78e-30 114
Msa0903860 AT3G53200.1 49.038 104 53 0 12 115 9 112 2.77e-30 115
Msa0903860 AT1G66390.1 53.846 104 48 0 12 115 8 111 7.34e-30 115
Msa0903860 AT2G26950.1 43.363 113 63 1 9 121 13 124 3.46e-28 113
Msa0903860 AT5G35550.2 64.865 74 26 0 45 118 50 123 4.40e-28 110
Msa0903860 AT5G40350.2 43.939 132 57 3 45 159 5 136 5.36e-28 107
Msa0903860 AT5G49620.2 44.186 129 58 1 8 122 22 150 9.76e-28 110
Msa0903860 AT5G59780.2 61.644 73 28 0 43 115 18 90 2.36e-27 107
Msa0903860 AT3G46130.3 62.500 72 27 0 44 115 9 80 2.58e-27 107
Msa0903860 AT3G46130.4 61.644 73 28 0 43 115 18 90 3.29e-27 107
Msa0903860 AT1G22640.3 58.667 75 31 0 59 133 2 76 3.35e-27 106
Msa0903860 AT3G47600.2 62.667 75 28 0 45 119 39 113 4.18e-27 109
Msa0903860 AT3G60460.1 43.750 112 61 2 9 119 8 118 1.73e-26 107
Msa0903860 AT1G71030.2 55.844 77 34 0 51 127 5 81 2.27e-26 103
Msa0903860 AT3G27810.2 58.333 72 30 0 45 116 4 75 2.39e-26 103
Msa0903860 AT3G27785.1 44.860 107 58 1 9 115 184 289 2.50e-26 108
Msa0903860 AT1G71030.1 55.844 77 34 0 51 127 19 95 2.95e-26 103
Msa0903860 AT3G12820.2 64.789 71 25 0 48 118 2 72 3.38e-26 103
Msa0903860 AT3G50060.1 46.078 102 54 1 14 115 6 106 8.18e-26 105
Msa0903860 AT2G23290.1 46.078 102 54 1 14 115 13 113 1.73e-25 104
Msa0903860 AT5G11050.1 43.810 105 58 1 11 115 102 205 1.99e-25 106
Msa0903860 AT5G58850.1 43.810 105 58 1 11 115 102 205 3.51e-25 105
Msa0903860 AT5G67300.1 46.078 102 54 1 14 115 6 106 3.65e-25 103
Msa0903860 AT4G18770.1 40.909 110 64 1 9 118 212 320 3.77e-25 105
Msa0903860 AT5G40360.1 42.718 103 58 1 12 114 156 257 7.12e-25 103
Msa0903860 AT4G37260.1 45.098 102 55 1 14 115 13 113 8.41e-25 102
Msa0903860 AT1G69560.1 44.444 108 59 1 9 116 102 208 8.72e-25 103
Msa0903860 AT1G69560.2 44.444 108 59 1 9 116 118 224 1.04e-24 103
Msa0903860 AT3G53200.2 58.904 73 30 0 43 115 7 79 1.29e-24 99.8
Msa0903860 AT1G17950.1 34.375 192 90 5 14 173 5 192 2.92e-24 100
Msa0903860 AT2G39880.1 46.729 107 55 2 9 115 46 150 7.73e-24 101
Msa0903860 AT5G02320.1 45.631 103 55 1 14 116 127 228 1.41e-23 102
Msa0903860 AT5G02320.2 45.631 103 55 1 14 116 127 228 1.41e-23 102
Msa0903860 AT3G09230.1 32.418 182 115 4 14 190 55 233 1.83e-23 100
Msa0903860 AT5G02320.3 45.631 103 55 1 14 116 67 168 2.05e-23 101
Msa0903860 AT3G09370.2 45.098 102 55 1 14 115 135 235 3.36e-23 100
Msa0903860 AT3G09370.1 45.098 102 55 1 14 115 130 230 3.54e-23 100
Msa0903860 AT3G09370.3 45.098 102 55 1 14 115 143 243 4.40e-23 100
Msa0903860 AT3G55730.1 44.340 106 58 1 14 119 56 160 4.93e-23 99.4
Msa0903860 AT1G26780.1 44.118 102 56 1 14 115 98 198 9.42e-23 96.7
Msa0903860 AT1G26780.2 43.269 104 58 1 12 115 96 198 1.55e-22 97.4
Msa0903860 AT1G66380.3 63.380 71 26 0 45 115 8 78 1.70e-22 91.3
Msa0903860 AT5G17800.1 36.806 144 83 3 14 156 93 229 1.81e-22 96.7
Msa0903860 AT5G14750.4 50.000 104 47 3 59 161 2 101 3.61e-22 91.3
Msa0903860 AT5G14750.2 50.000 104 47 3 59 161 2 101 3.61e-22 91.3
Msa0903860 AT2G25230.1 38.983 118 69 2 9 124 21 137 5.02e-22 93.6
Msa0903860 AT3G29020.1 39.806 103 61 1 14 116 65 166 6.26e-21 90.5
Msa0903860 AT1G73410.1 46.078 102 54 1 14 115 6 106 1.04e-20 90.1
Msa0903860 AT3G29020.2 39.806 103 61 1 14 116 67 168 1.79e-20 90.5
Msa0903860 AT5G11510.5 39.806 103 61 1 14 116 81 182 2.25e-20 92.8
Msa0903860 AT5G11510.3 39.806 103 61 1 14 116 81 182 2.31e-20 92.8
Msa0903860 AT5G11510.1 39.806 103 61 1 14 116 81 182 2.31e-20 92.8
Msa0903860 AT5G11510.4 39.806 103 61 1 14 116 81 182 2.31e-20 92.8
Msa0903860 AT5G11510.2 39.806 103 61 1 14 116 81 182 2.42e-20 92.8
Msa0903860 AT4G33450.1 40.187 107 63 1 9 115 14 119 2.55e-20 89.4
Msa0903860 AT1G73410.2 46.078 102 54 1 14 115 6 106 2.82e-20 87.8
Msa0903860 AT3G23250.2 60.345 58 23 0 59 116 2 59 9.55e-20 87.0
Msa0903860 AT4G32730.1 38.835 103 62 1 14 116 87 188 4.64e-19 89.0
Msa0903860 AT4G32730.5 38.835 103 62 1 14 116 87 188 5.30e-19 89.0
Msa0903860 AT4G32730.4 38.835 103 62 1 14 116 87 188 5.30e-19 89.0
Msa0903860 AT4G32730.3 38.835 103 62 1 14 116 87 188 5.30e-19 89.0
Msa0903860 AT4G32730.2 38.835 103 62 1 14 116 87 188 5.30e-19 89.0
Msa0903860 AT5G40430.1 38.393 112 67 2 9 120 49 158 2.51e-18 83.6
Msa0903860 AT5G61420.1 64.000 50 18 0 81 130 2 51 2.78e-18 84.3
Msa0903860 AT5G15310.3 66.667 51 16 1 88 137 9 59 6.41e-17 79.7
Msa0903860 AT1G66380.2 43.210 81 46 0 12 92 8 88 1.90e-16 74.7
Msa0903860 AT2G37630.1 40.404 99 57 1 14 110 4 102 2.39e-16 79.7
Msa0903860 AT4G28110.2 70.732 41 12 0 88 128 4 44 3.18e-16 76.6
Msa0903860 AT4G00540.2 35.185 108 66 2 12 116 101 207 2.78e-15 76.6
Msa0903860 AT5G39700.1 39.423 104 62 1 15 118 57 159 3.41e-15 73.6
Msa0903860 AT4G00540.1 35.185 108 66 2 12 116 99 205 3.95e-15 76.6
Msa0903860 AT2G02820.3 36.364 99 62 1 17 115 33 130 5.33e-15 75.5
Msa0903860 AT2G02820.1 36.364 99 62 1 17 115 33 130 7.23e-15 75.9
Msa0903860 AT2G02820.2 36.364 99 62 1 17 115 33 130 1.11e-14 75.1
Msa0903860 AT5G59780.1 60.870 46 18 0 70 115 1 46 1.11e-14 71.6
Msa0903860 AT3G46130.2 60.870 46 18 0 70 115 1 46 1.61e-14 71.6
Msa0903860 AT1G14350.2 36.364 99 62 1 17 115 28 125 1.77e-14 74.3
Msa0903860 AT1G14350.1 36.364 99 62 1 17 115 28 125 1.77e-14 74.3
Msa0903860 AT4G25560.2 58.333 48 20 0 71 118 3 50 3.30e-14 71.2
Msa0903860 AT1G74430.2 51.852 54 26 0 77 130 8 61 6.14e-14 70.1
Msa0903860 AT1G22640.2 56.522 46 20 0 88 133 16 61 2.32e-13 68.2
Msa0903860 AT5G14340.2 50.943 53 25 1 81 132 2 54 2.58e-13 68.2
Msa0903860 AT1G74650.3 60.465 43 17 0 77 119 1 43 1.31e-11 64.3
Msa0903860 AT3G28910.2 56.522 46 20 0 77 122 1 46 3.60e-11 63.2

Find 50 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCATTACTATTGAAATTAT+TGG 0.113226 6_2:+1293654 None:intergenic
GGCAACATTTCCAGAAATTT+TGG 0.117582 6_2:-1293482 Msa0903860:CDS
TTCATTTGTGGATGGTATTT+TGG 0.129696 6_2:-1293524 Msa0903860:CDS
AAGAAAGAAGCTTATGAAAA+TGG 0.185126 6_2:-1294139 Msa0903860:CDS
AAAGAAGCATCCAAAATTTC+TGG 0.229497 6_2:+1293472 None:intergenic
TGTCAATAACACCCCAATAT+TGG 0.259810 6_2:-1294013 Msa0903860:CDS
GAGCTGATTATTACCCTTCA+TGG 0.280333 6_2:-1295278 Msa0903860:CDS
CCAATGTGAAAAGAGGTTTA+TGG 0.307550 6_2:-1295783 Msa0903860:CDS
ACAATGATGTCAAGAATTAT+TGG 0.314255 6_2:-1294173 Msa0903860:CDS
ACATCATTGTCTGTTCTTCC+AGG 0.314381 6_2:+1294186 None:intergenic
CCAATTTCCAATTCCATGAT+TGG 0.323465 6_2:+1295723 None:intergenic
GAAACTGGCTTATGAGTTAC+TGG 0.324766 6_2:+1294108 None:intergenic
ATTACCCTTCATGGAGCTAT+AGG 0.324847 6_2:-1295269 Msa0903860:CDS
TCAGAAATCACTTGTGAAAC+TGG 0.330362 6_2:+1294093 None:intergenic
CCAATCATGGAATTGGAAAT+TGG 0.338514 6_2:-1295723 Msa0903860:CDS
TATGTAGCCAATCATGGAAT+TGG 0.348613 6_2:-1295730 Msa0903860:CDS
AATTCTCTTGGTTTGTGAAT+TGG 0.359504 6_2:+1293938 None:intergenic
TGTTATTGACAAAATTCATT+TGG 0.391041 6_2:+1294025 None:intergenic
ATAGGTGTGGTAAGAGTTGC+AGG 0.392561 6_2:-1295364 Msa0903860:CDS
TCCAATAATTTCAATAGTAA+TGG 0.398742 6_2:-1293655 Msa0903860:CDS
AAATTAACTCTAACTTTGAA+TGG 0.399442 6_2:-1293804 Msa0903860:CDS
CATGTTGTTGGAAATTCTCT+TGG 0.405895 6_2:+1293926 None:intergenic
GGACAAGGACAGTGAGATAA+GGG 0.415875 6_2:-1293503 Msa0903860:CDS
CTTCACTTAAGACATGTTGT+TGG 0.429030 6_2:+1293914 None:intergenic
AGAAAGAAGCTTATGAAAAT+GGG 0.435037 6_2:-1294138 Msa0903860:CDS
TGAATTTCTGTCCACACTAA+AGG 0.442432 6_2:+1293757 None:intergenic
ATGTCATCATTGAGCCTCTC+AGG 0.445638 6_2:-1293703 Msa0903860:CDS
CGTCTTCTTCTAATCTCACT+AGG 0.458901 6_2:-1293870 Msa0903860:CDS
GATAAAACCAATGTGAAAAG+AGG 0.459392 6_2:-1295790 Msa0903860:CDS
CTTGCTTATGTAGCCAATCA+TGG 0.462672 6_2:-1295736 Msa0903860:CDS
TCACAAGTGATTTCTGACTT+AGG 0.476952 6_2:-1294087 Msa0903860:CDS
ATAATCAGCTCTTCTTCCTC+AGG 0.485175 6_2:+1295290 None:intergenic
AAACTATCATGCTTGAGATC+AGG 0.493104 6_2:+1295317 None:intergenic
TGGACAAGGACAGTGAGATA+AGG 0.499071 6_2:-1293504 Msa0903860:CDS
TTCAACAATGTGACATACAA+AGG 0.507852 6_2:-1293729 Msa0903860:CDS
GTGTTGCAAGAGTACGAAAT+CGG 0.514008 6_2:+1293838 None:intergenic
AAACAAGGTGGTTCAAGTGA+AGG 0.532114 6_2:-1293625 Msa0903860:CDS
TGCTTCCTATAGCTCCATGA+AGG 0.532634 6_2:+1295264 None:intergenic
ACAGCTGTTCCAAAGAAAGC+AGG 0.547976 6_2:-1295700 Msa0903860:intron
TCAGGGAATTCATTTGTGGA+TGG 0.549178 6_2:-1293532 Msa0903860:CDS
TCAACAATGTGACATACAAA+GGG 0.560280 6_2:-1293728 Msa0903860:CDS
TTCATGGAGCTATAGGAAGC+AGG 0.564282 6_2:-1295262 Msa0903860:intron
CACTTTGCATTATACCTGAG+AGG 0.565904 6_2:+1293689 None:intergenic
GAGAGTTTGATGTTGTTGTG+AGG 0.612357 6_2:+1294052 None:intergenic
TCAGGTATAATGCAAAGTGA+AGG 0.630289 6_2:-1293685 Msa0903860:CDS
ACAATGATGAGCCTTTAGTG+TGG 0.648778 6_2:-1293768 Msa0903860:CDS
AAGAGGTTTATGGACTCCTG+AGG 0.664726 6_2:-1295773 Msa0903860:CDS
GCTTCCTATAGCTCCATGAA+GGG 0.674390 6_2:+1295265 None:intergenic
AGTAATGGTGATGATAAACA+AGG 0.711484 6_2:-1293640 Msa0903860:CDS
AATGGTGATGATAAACAAGG+TGG 0.713993 6_2:-1293637 Msa0903860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAGATGTATAAAAAAA+TGG + chr6_2:1294077-1294096 None:intergenic 10.0%
!!! TCTTATCATTTTTTAATTTA+TGG + chr6_2:1294818-1294837 None:intergenic 10.0%
!! TAAATTAAAAAATGATAAGA+AGG - chr6_2:1294818-1294837 Msa0903860:intron 10.0%
!!! TTTTTAGATGTATAAAAAAA+TGG + chr6_2:1294077-1294096 None:intergenic 10.0%
!!! TCTTATCATTTTTTAATTTA+TGG + chr6_2:1294818-1294837 None:intergenic 10.0%
!! TAAATTAAAAAATGATAAGA+AGG - chr6_2:1294818-1294837 Msa0903860:intron 10.0%
!! TACATCAAGAAAATTAAATA+AGG + chr6_2:1294453-1294472 None:intergenic 15.0%
!!! TGTTAAATTTTATTTAGTGT+CGG + chr6_2:1294901-1294920 None:intergenic 15.0%
!! AAAACAATAAAATCAATGTT+TGG + chr6_2:1295028-1295047 None:intergenic 15.0%
!!! GTTTTTTTAATTAATGTAGA+TGG - chr6_2:1295043-1295062 Msa0903860:intron 15.0%
!! TACATCAAGAAAATTAAATA+AGG + chr6_2:1294453-1294472 None:intergenic 15.0%
!!! TGTTAAATTTTATTTAGTGT+CGG + chr6_2:1294901-1294920 None:intergenic 15.0%
!! AAAACAATAAAATCAATGTT+TGG + chr6_2:1295028-1295047 None:intergenic 15.0%
!!! GTTTTTTTAATTAATGTAGA+TGG - chr6_2:1295043-1295062 Msa0903860:intron 15.0%
!! ATCTCAAATCTTATATATTG+AGG - chr6_2:1293692-1293711 Msa0903860:CDS 20.0%
!! TTTCAAACTATTTATGAACA+TGG + chr6_2:1293750-1293769 None:intergenic 20.0%
!! AAAAAAATGCATAATTCACA+TGG - chr6_2:1294159-1294178 Msa0903860:CDS 20.0%
!! AAAAAATGCATAATTCACAT+GGG - chr6_2:1294160-1294179 Msa0903860:CDS 20.0%
!!! CTATATGTTTTAGTATAACA+TGG - chr6_2:1294197-1294216 Msa0903860:CDS 20.0%
!! GAAAATGAGATTTAATATCT+AGG - chr6_2:1294295-1294314 Msa0903860:intron 20.0%
!!! TTTTTACTTATAATTGAGAC+TGG + chr6_2:1294388-1294407 None:intergenic 20.0%
!!! TTGAAAACCTGTTTTATTAA+AGG - chr6_2:1294527-1294546 Msa0903860:intron 20.0%
!!! TGAAAACCTGTTTTATTAAA+GGG - chr6_2:1294528-1294547 Msa0903860:intron 20.0%
!! AAAATACCCTTTAATAAAAC+AGG + chr6_2:1294537-1294556 None:intergenic 20.0%
!!! GAATTTTAAATGGATCAAAA+TGG - chr6_2:1294789-1294808 Msa0903860:intron 20.0%
!!! TTGGAATGTGATTTTAAATT+AGG + chr6_2:1295009-1295028 None:intergenic 20.0%
!! TGTTATTGACAAAATTCATT+TGG + chr6_2:1295251-1295270 None:intergenic 20.0%
!! AAATTAACTCTAACTTTGAA+TGG - chr6_2:1295469-1295488 Msa0903860:intron 20.0%
!! TCCAATAATTTCAATAGTAA+TGG - chr6_2:1295618-1295637 Msa0903860:intron 20.0%
!! ACCATTACTATTGAAATTAT+TGG + chr6_2:1295622-1295641 None:intergenic 20.0%
!! ATCTCAAATCTTATATATTG+AGG - chr6_2:1293692-1293711 Msa0903860:CDS 20.0%
!! TTTCAAACTATTTATGAACA+TGG + chr6_2:1293750-1293769 None:intergenic 20.0%
!! AAAAAAATGCATAATTCACA+TGG - chr6_2:1294159-1294178 Msa0903860:CDS 20.0%
!! AAAAAATGCATAATTCACAT+GGG - chr6_2:1294160-1294179 Msa0903860:CDS 20.0%
!!! CTATATGTTTTAGTATAACA+TGG - chr6_2:1294197-1294216 Msa0903860:CDS 20.0%
!! GAAAATGAGATTTAATATCT+AGG - chr6_2:1294295-1294314 Msa0903860:intron 20.0%
!!! TTTTTACTTATAATTGAGAC+TGG + chr6_2:1294388-1294407 None:intergenic 20.0%
!!! TTGAAAACCTGTTTTATTAA+AGG - chr6_2:1294527-1294546 Msa0903860:intron 20.0%
!!! TGAAAACCTGTTTTATTAAA+GGG - chr6_2:1294528-1294547 Msa0903860:intron 20.0%
!! AAAATACCCTTTAATAAAAC+AGG + chr6_2:1294537-1294556 None:intergenic 20.0%
!!! GAATTTTAAATGGATCAAAA+TGG - chr6_2:1294789-1294808 Msa0903860:intron 20.0%
!!! TTGGAATGTGATTTTAAATT+AGG + chr6_2:1295009-1295028 None:intergenic 20.0%
!! TGTTATTGACAAAATTCATT+TGG + chr6_2:1295251-1295270 None:intergenic 20.0%
!! AAATTAACTCTAACTTTGAA+TGG - chr6_2:1295469-1295488 Msa0903860:intron 20.0%
!! TCCAATAATTTCAATAGTAA+TGG - chr6_2:1295618-1295637 Msa0903860:intron 20.0%
!! ACCATTACTATTGAAATTAT+TGG + chr6_2:1295622-1295641 None:intergenic 20.0%
! TATCGTGTGTTATATTAAGT+CGG - chr6_2:1293789-1293808 Msa0903860:CDS 25.0%
! ATTATATAACACTCAGTATC+CGG + chr6_2:1293823-1293842 None:intergenic 25.0%
!!! TTTTACTTGAACTTGTTTTC+AGG - chr6_2:1293881-1293900 Msa0903860:CDS 25.0%
!!! TTTACTTGAACTTGTTTTCA+GGG - chr6_2:1293882-1293901 Msa0903860:CDS 25.0%
! GATGTATAAAAAAATGGAAC+AGG + chr6_2:1294071-1294090 None:intergenic 25.0%
! AAAGTGAATAAATCGTGATA+AGG - chr6_2:1294767-1294786 Msa0903860:intron 25.0%
!! TCGTGATAAGGAATTTTAAA+TGG - chr6_2:1294779-1294798 Msa0903860:intron 25.0%
! ATGACATGAATCTCAAATTT+AGG - chr6_2:1294955-1294974 Msa0903860:intron 25.0%
!! CTATGATCTTTTATCTCAAA+AGG + chr6_2:1294986-1295005 None:intergenic 25.0%
! ACAATGATGTCAAGAATTAT+TGG - chr6_2:1295100-1295119 Msa0903860:intron 25.0%
! AAGAAAGAAGCTTATGAAAA+TGG - chr6_2:1295134-1295153 Msa0903860:intron 25.0%
! AGAAAGAAGCTTATGAAAAT+GGG - chr6_2:1295135-1295154 Msa0903860:intron 25.0%
!! TATTGAACTTGATTTTGCAT+TGG + chr6_2:1295312-1295331 None:intergenic 25.0%
! TATCGTGTGTTATATTAAGT+CGG - chr6_2:1293789-1293808 Msa0903860:CDS 25.0%
! ATTATATAACACTCAGTATC+CGG + chr6_2:1293823-1293842 None:intergenic 25.0%
!!! TTTTACTTGAACTTGTTTTC+AGG - chr6_2:1293881-1293900 Msa0903860:CDS 25.0%
!!! TTTACTTGAACTTGTTTTCA+GGG - chr6_2:1293882-1293901 Msa0903860:CDS 25.0%
! GATGTATAAAAAAATGGAAC+AGG + chr6_2:1294071-1294090 None:intergenic 25.0%
! AAAGTGAATAAATCGTGATA+AGG - chr6_2:1294767-1294786 Msa0903860:intron 25.0%
!! TCGTGATAAGGAATTTTAAA+TGG - chr6_2:1294779-1294798 Msa0903860:intron 25.0%
! ATGACATGAATCTCAAATTT+AGG - chr6_2:1294955-1294974 Msa0903860:intron 25.0%
!! CTATGATCTTTTATCTCAAA+AGG + chr6_2:1294986-1295005 None:intergenic 25.0%
! ACAATGATGTCAAGAATTAT+TGG - chr6_2:1295100-1295119 Msa0903860:intron 25.0%
! AAGAAAGAAGCTTATGAAAA+TGG - chr6_2:1295134-1295153 Msa0903860:intron 25.0%
! AGAAAGAAGCTTATGAAAAT+GGG - chr6_2:1295135-1295154 Msa0903860:intron 25.0%
!! TATTGAACTTGATTTTGCAT+TGG + chr6_2:1295312-1295331 None:intergenic 25.0%
!!! ACATTGGTTTTATCACAACA+AGG + chr6_2:1293477-1293496 None:intergenic 30.0%
GATAAAACCAATGTGAAAAG+AGG - chr6_2:1293483-1293502 Msa0903860:CDS 30.0%
AAAACCATGTTCGTGAATAA+AGG + chr6_2:1293613-1293632 None:intergenic 30.0%
TGAAGAAGCAAATATGTACA+TGG + chr6_2:1294272-1294291 None:intergenic 30.0%
AGTTCGGTCTTAAATATAAG+AGG + chr6_2:1294678-1294697 None:intergenic 30.0%
!!! TTTTATTTAGTGTCGGCTTA+AGG + chr6_2:1294894-1294913 None:intergenic 30.0%
! TTTTGTGTGTTCCAATATTG+GGG + chr6_2:1295274-1295293 None:intergenic 30.0%
! CTTTTGTGTGTTCCAATATT+GGG + chr6_2:1295275-1295294 None:intergenic 30.0%
! TCTTTTGTGTGTTCCAATAT+TGG + chr6_2:1295276-1295295 None:intergenic 30.0%
!! AATTCTCTTGGTTTGTGAAT+TGG + chr6_2:1295338-1295357 None:intergenic 30.0%
TTCAACAATGTGACATACAA+AGG - chr6_2:1295544-1295563 Msa0903860:intron 30.0%
TCAACAATGTGACATACAAA+GGG - chr6_2:1295545-1295564 Msa0903860:intron 30.0%
! AGTAATGGTGATGATAAACA+AGG - chr6_2:1295633-1295652 Msa0903860:intron 30.0%
! TGTGAAGCAAATTCATTTTC+AGG - chr6_2:1295723-1295742 Msa0903860:CDS 30.0%
! GTGAAGCAAATTCATTTTCA+GGG - chr6_2:1295724-1295743 Msa0903860:CDS 30.0%
!! ATTTTCAGGGAATTCATTTG+TGG - chr6_2:1295737-1295756 Msa0903860:CDS 30.0%
! TTCATTTGTGGATGGTATTT+TGG - chr6_2:1295749-1295768 Msa0903860:CDS 30.0%
!! AAAGAAGCATCCAAAATTTC+TGG + chr6_2:1295804-1295823 None:intergenic 30.0%
!!! ACATTGGTTTTATCACAACA+AGG + chr6_2:1293477-1293496 None:intergenic 30.0%
GATAAAACCAATGTGAAAAG+AGG - chr6_2:1293483-1293502 Msa0903860:CDS 30.0%
AAAACCATGTTCGTGAATAA+AGG + chr6_2:1293613-1293632 None:intergenic 30.0%
TGAAGAAGCAAATATGTACA+TGG + chr6_2:1294272-1294291 None:intergenic 30.0%
AGTTCGGTCTTAAATATAAG+AGG + chr6_2:1294678-1294697 None:intergenic 30.0%
!!! TTTTATTTAGTGTCGGCTTA+AGG + chr6_2:1294894-1294913 None:intergenic 30.0%
! TTTTGTGTGTTCCAATATTG+GGG + chr6_2:1295274-1295293 None:intergenic 30.0%
! CTTTTGTGTGTTCCAATATT+GGG + chr6_2:1295275-1295294 None:intergenic 30.0%
! TCTTTTGTGTGTTCCAATAT+TGG + chr6_2:1295276-1295295 None:intergenic 30.0%
!! AATTCTCTTGGTTTGTGAAT+TGG + chr6_2:1295338-1295357 None:intergenic 30.0%
TTCAACAATGTGACATACAA+AGG - chr6_2:1295544-1295563 Msa0903860:intron 30.0%
TCAACAATGTGACATACAAA+GGG - chr6_2:1295545-1295564 Msa0903860:intron 30.0%
! AGTAATGGTGATGATAAACA+AGG - chr6_2:1295633-1295652 Msa0903860:intron 30.0%
! TGTGAAGCAAATTCATTTTC+AGG - chr6_2:1295723-1295742 Msa0903860:CDS 30.0%
! GTGAAGCAAATTCATTTTCA+GGG - chr6_2:1295724-1295743 Msa0903860:CDS 30.0%
!! ATTTTCAGGGAATTCATTTG+TGG - chr6_2:1295737-1295756 Msa0903860:CDS 30.0%
! TTCATTTGTGGATGGTATTT+TGG - chr6_2:1295749-1295768 Msa0903860:CDS 30.0%
!! AAAGAAGCATCCAAAATTTC+TGG + chr6_2:1295804-1295823 None:intergenic 30.0%
!!! TTGGTTTTATCACAACAAGG+AGG + chr6_2:1293474-1293493 None:intergenic 35.0%
! CCATAAACCTCTTTTCACAT+TGG + chr6_2:1293493-1293512 None:intergenic 35.0%
CCAATGTGAAAAGAGGTTTA+TGG - chr6_2:1293490-1293509 Msa0903860:CDS 35.0%
!!! AGTATTTTAGCATCTTCCTC+AGG + chr6_2:1293519-1293538 None:intergenic 35.0%
TATGTAGCCAATCATGGAAT+TGG - chr6_2:1293543-1293562 Msa0903860:CDS 35.0%
CCAATTTCCAATTCCATGAT+TGG + chr6_2:1293553-1293572 None:intergenic 35.0%
CCAATCATGGAATTGGAAAT+TGG - chr6_2:1293550-1293569 Msa0903860:CDS 35.0%
AGGAAAAAACCTGCTTTCTT+TGG + chr6_2:1293585-1293604 None:intergenic 35.0%
GATTCCTTTATTCACGAACA+TGG - chr6_2:1293606-1293625 Msa0903860:CDS 35.0%
TATCACATTCACAACCACAT+TGG + chr6_2:1293661-1293680 None:intergenic 35.0%
ATATATTGAGGCCACATTTG+CGG - chr6_2:1293704-1293723 Msa0903860:CDS 35.0%
!! ACTTGTTTTCAGGGTTGAAT+AGG - chr6_2:1293891-1293910 Msa0903860:CDS 35.0%
AAACTATCATGCTTGAGATC+AGG + chr6_2:1293959-1293978 None:intergenic 35.0%
ACATTTGTACTGTGATCAGA+TGG + chr6_2:1294330-1294349 None:intergenic 35.0%
AAGACTACTAGCTACTAGTT+CGG + chr6_2:1294694-1294713 None:intergenic 35.0%
! TTTAGATCTTCGATCGACTT+TGG + chr6_2:1294732-1294751 None:intergenic 35.0%
! TCGATCGAAGATCTAAAGTT+AGG - chr6_2:1294735-1294754 Msa0903860:intron 35.0%
ATGATAAGAAGGACTGAGTA+AGG - chr6_2:1294829-1294848 Msa0903860:intron 35.0%
!! TGGCTTTGACTCCTAAAATA+AGG - chr6_2:1294852-1294871 Msa0903860:intron 35.0%
! GGCTTTGACTCCTAAAATAA+GGG - chr6_2:1294853-1294872 Msa0903860:intron 35.0%
!!! GTCAAACGAACCCTTATTTT+AGG + chr6_2:1294866-1294885 None:intergenic 35.0%
TGTATTGCAAAAAGACTACC+TGG - chr6_2:1295069-1295088 Msa0903860:intron 35.0%
TCAGAAATCACTTGTGAAAC+TGG + chr6_2:1295183-1295202 None:intergenic 35.0%
TCACAAGTGATTTCTGACTT+AGG - chr6_2:1295186-1295205 Msa0903860:intron 35.0%
TGTCAATAACACCCCAATAT+TGG - chr6_2:1295260-1295279 Msa0903860:intron 35.0%
CATGTTGTTGGAAATTCTCT+TGG + chr6_2:1295350-1295369 None:intergenic 35.0%
CTTCACTTAAGACATGTTGT+TGG + chr6_2:1295362-1295381 None:intergenic 35.0%
TGAATTTCTGTCCACACTAA+AGG + chr6_2:1295519-1295538 None:intergenic 35.0%
TCAGGTATAATGCAAAGTGA+AGG - chr6_2:1295588-1295607 Msa0903860:intron 35.0%
! AATGGTGATGATAAACAAGG+TGG - chr6_2:1295636-1295655 Msa0903860:intron 35.0%
! GGCAACATTTCCAGAAATTT+TGG - chr6_2:1295791-1295810 Msa0903860:CDS 35.0%
!!! TTGGTTTTATCACAACAAGG+AGG + chr6_2:1293474-1293493 None:intergenic 35.0%
! CCATAAACCTCTTTTCACAT+TGG + chr6_2:1293493-1293512 None:intergenic 35.0%
CCAATGTGAAAAGAGGTTTA+TGG - chr6_2:1293490-1293509 Msa0903860:CDS 35.0%
!!! AGTATTTTAGCATCTTCCTC+AGG + chr6_2:1293519-1293538 None:intergenic 35.0%
TATGTAGCCAATCATGGAAT+TGG - chr6_2:1293543-1293562 Msa0903860:CDS 35.0%
CCAATTTCCAATTCCATGAT+TGG + chr6_2:1293553-1293572 None:intergenic 35.0%
CCAATCATGGAATTGGAAAT+TGG - chr6_2:1293550-1293569 Msa0903860:CDS 35.0%
AGGAAAAAACCTGCTTTCTT+TGG + chr6_2:1293585-1293604 None:intergenic 35.0%
GATTCCTTTATTCACGAACA+TGG - chr6_2:1293606-1293625 Msa0903860:CDS 35.0%
TATCACATTCACAACCACAT+TGG + chr6_2:1293661-1293680 None:intergenic 35.0%
ATATATTGAGGCCACATTTG+CGG - chr6_2:1293704-1293723 Msa0903860:CDS 35.0%
!! ACTTGTTTTCAGGGTTGAAT+AGG - chr6_2:1293891-1293910 Msa0903860:CDS 35.0%
AAACTATCATGCTTGAGATC+AGG + chr6_2:1293959-1293978 None:intergenic 35.0%
ACATTTGTACTGTGATCAGA+TGG + chr6_2:1294330-1294349 None:intergenic 35.0%
AAGACTACTAGCTACTAGTT+CGG + chr6_2:1294694-1294713 None:intergenic 35.0%
! TTTAGATCTTCGATCGACTT+TGG + chr6_2:1294732-1294751 None:intergenic 35.0%
! TCGATCGAAGATCTAAAGTT+AGG - chr6_2:1294735-1294754 Msa0903860:intron 35.0%
ATGATAAGAAGGACTGAGTA+AGG - chr6_2:1294829-1294848 Msa0903860:intron 35.0%
!! TGGCTTTGACTCCTAAAATA+AGG - chr6_2:1294852-1294871 Msa0903860:intron 35.0%
! GGCTTTGACTCCTAAAATAA+GGG - chr6_2:1294853-1294872 Msa0903860:intron 35.0%
!!! GTCAAACGAACCCTTATTTT+AGG + chr6_2:1294866-1294885 None:intergenic 35.0%
TGTATTGCAAAAAGACTACC+TGG - chr6_2:1295069-1295088 Msa0903860:intron 35.0%
TCAGAAATCACTTGTGAAAC+TGG + chr6_2:1295183-1295202 None:intergenic 35.0%
TCACAAGTGATTTCTGACTT+AGG - chr6_2:1295186-1295205 Msa0903860:intron 35.0%
TGTCAATAACACCCCAATAT+TGG - chr6_2:1295260-1295279 Msa0903860:intron 35.0%
CATGTTGTTGGAAATTCTCT+TGG + chr6_2:1295350-1295369 None:intergenic 35.0%
CTTCACTTAAGACATGTTGT+TGG + chr6_2:1295362-1295381 None:intergenic 35.0%
TGAATTTCTGTCCACACTAA+AGG + chr6_2:1295519-1295538 None:intergenic 35.0%
TCAGGTATAATGCAAAGTGA+AGG - chr6_2:1295588-1295607 Msa0903860:intron 35.0%
! AATGGTGATGATAAACAAGG+TGG - chr6_2:1295636-1295655 Msa0903860:intron 35.0%
! GGCAACATTTCCAGAAATTT+TGG - chr6_2:1295791-1295810 Msa0903860:CDS 35.0%
CTTGCTTATGTAGCCAATCA+TGG - chr6_2:1293537-1293556 Msa0903860:CDS 40.0%
GTTCGTGAATAAAGGAATCG+AGG + chr6_2:1293605-1293624 None:intergenic 40.0%
TATTAAGTCGGTCTTTGAGC+CGG - chr6_2:1293801-1293820 Msa0903860:CDS 40.0%
!! TTTTCAGGGTTGAATAGGTG+TGG - chr6_2:1293896-1293915 Msa0903860:CDS 40.0%
!! GCATGATAGTTTTACACCTG+AGG - chr6_2:1293967-1293986 Msa0903860:CDS 40.0%
ATAATCAGCTCTTCTTCCTC+AGG + chr6_2:1293986-1294005 None:intergenic 40.0%
GAGCTGATTATTACCCTTCA+TGG - chr6_2:1293995-1294014 Msa0903860:CDS 40.0%
ATTACCCTTCATGGAGCTAT+AGG - chr6_2:1294004-1294023 Msa0903860:CDS 40.0%
GAACTAGTAGCTAGTAGTCT+TGG - chr6_2:1294693-1294712 Msa0903860:intron 40.0%
ATAAGAAGGACTGAGTAAGG+TGG - chr6_2:1294832-1294851 Msa0903860:intron 40.0%
!! TTAGTGTCGGCTTAAGGATA+AGG + chr6_2:1294888-1294907 None:intergenic 40.0%
ACATCATTGTCTGTTCTTCC+AGG + chr6_2:1295090-1295109 None:intergenic 40.0%
! GAAACTGGCTTATGAGTTAC+TGG + chr6_2:1295168-1295187 None:intergenic 40.0%
GAGAGTTTGATGTTGTTGTG+AGG + chr6_2:1295224-1295243 None:intergenic 40.0%
CGTCTTCTTCTAATCTCACT+AGG - chr6_2:1295403-1295422 Msa0903860:intron 40.0%
! GTGTTGCAAGAGTACGAAAT+CGG + chr6_2:1295438-1295457 None:intergenic 40.0%
ACAATGATGAGCCTTTAGTG+TGG - chr6_2:1295505-1295524 Msa0903860:intron 40.0%
CACTTTGCATTATACCTGAG+AGG + chr6_2:1295587-1295606 None:intergenic 40.0%
AAACAAGGTGGTTCAAGTGA+AGG - chr6_2:1295648-1295667 Msa0903860:intron 40.0%
! TGGTTCAAGTGAAGGTTTTG+AGG - chr6_2:1295656-1295675 Msa0903860:intron 40.0%
TCAGGGAATTCATTTGTGGA+TGG - chr6_2:1295741-1295760 Msa0903860:CDS 40.0%
!! TGTGGATGGTATTTTGGACA+AGG - chr6_2:1295755-1295774 Msa0903860:CDS 40.0%
CTTGCTTATGTAGCCAATCA+TGG - chr6_2:1293537-1293556 Msa0903860:CDS 40.0%
GTTCGTGAATAAAGGAATCG+AGG + chr6_2:1293605-1293624 None:intergenic 40.0%
TATTAAGTCGGTCTTTGAGC+CGG - chr6_2:1293801-1293820 Msa0903860:CDS 40.0%
!! TTTTCAGGGTTGAATAGGTG+TGG - chr6_2:1293896-1293915 Msa0903860:CDS 40.0%
!! GCATGATAGTTTTACACCTG+AGG - chr6_2:1293967-1293986 Msa0903860:CDS 40.0%
ATAATCAGCTCTTCTTCCTC+AGG + chr6_2:1293986-1294005 None:intergenic 40.0%
GAGCTGATTATTACCCTTCA+TGG - chr6_2:1293995-1294014 Msa0903860:CDS 40.0%
ATTACCCTTCATGGAGCTAT+AGG - chr6_2:1294004-1294023 Msa0903860:CDS 40.0%
GAACTAGTAGCTAGTAGTCT+TGG - chr6_2:1294693-1294712 Msa0903860:intron 40.0%
ATAAGAAGGACTGAGTAAGG+TGG - chr6_2:1294832-1294851 Msa0903860:intron 40.0%
!! TTAGTGTCGGCTTAAGGATA+AGG + chr6_2:1294888-1294907 None:intergenic 40.0%
ACATCATTGTCTGTTCTTCC+AGG + chr6_2:1295090-1295109 None:intergenic 40.0%
! GAAACTGGCTTATGAGTTAC+TGG + chr6_2:1295168-1295187 None:intergenic 40.0%
GAGAGTTTGATGTTGTTGTG+AGG + chr6_2:1295224-1295243 None:intergenic 40.0%
CGTCTTCTTCTAATCTCACT+AGG - chr6_2:1295403-1295422 Msa0903860:intron 40.0%
! GTGTTGCAAGAGTACGAAAT+CGG + chr6_2:1295438-1295457 None:intergenic 40.0%
ACAATGATGAGCCTTTAGTG+TGG - chr6_2:1295505-1295524 Msa0903860:intron 40.0%
CACTTTGCATTATACCTGAG+AGG + chr6_2:1295587-1295606 None:intergenic 40.0%
AAACAAGGTGGTTCAAGTGA+AGG - chr6_2:1295648-1295667 Msa0903860:intron 40.0%
! TGGTTCAAGTGAAGGTTTTG+AGG - chr6_2:1295656-1295675 Msa0903860:intron 40.0%
TCAGGGAATTCATTTGTGGA+TGG - chr6_2:1295741-1295760 Msa0903860:CDS 40.0%
!! TGTGGATGGTATTTTGGACA+AGG - chr6_2:1295755-1295774 Msa0903860:CDS 40.0%
AAGAGGTTTATGGACTCCTG+AGG - chr6_2:1293500-1293519 Msa0903860:CDS 45.0%
ACAGCTGTTCCAAAGAAAGC+AGG - chr6_2:1293573-1293592 Msa0903860:CDS 45.0%
GCAGTATAATGCGACCAATG+TGG - chr6_2:1293644-1293663 Msa0903860:CDS 45.0%
ATAGGTGTGGTAAGAGTTGC+AGG - chr6_2:1293909-1293928 Msa0903860:CDS 45.0%
GCTTCCTATAGCTCCATGAA+GGG + chr6_2:1294011-1294030 None:intergenic 45.0%
TGCTTCCTATAGCTCCATGA+AGG + chr6_2:1294012-1294031 None:intergenic 45.0%
TTCATGGAGCTATAGGAAGC+AGG - chr6_2:1294011-1294030 Msa0903860:CDS 45.0%
ATGTCATCATTGAGCCTCTC+AGG - chr6_2:1295570-1295589 Msa0903860:intron 45.0%
TGGACAAGGACAGTGAGATA+AGG - chr6_2:1295769-1295788 Msa0903860:CDS 45.0%
GGACAAGGACAGTGAGATAA+GGG - chr6_2:1295770-1295789 Msa0903860:CDS 45.0%
AAGAGGTTTATGGACTCCTG+AGG - chr6_2:1293500-1293519 Msa0903860:CDS 45.0%
ACAGCTGTTCCAAAGAAAGC+AGG - chr6_2:1293573-1293592 Msa0903860:CDS 45.0%
GCAGTATAATGCGACCAATG+TGG - chr6_2:1293644-1293663 Msa0903860:CDS 45.0%
ATAGGTGTGGTAAGAGTTGC+AGG - chr6_2:1293909-1293928 Msa0903860:CDS 45.0%
GCTTCCTATAGCTCCATGAA+GGG + chr6_2:1294011-1294030 None:intergenic 45.0%
TGCTTCCTATAGCTCCATGA+AGG + chr6_2:1294012-1294031 None:intergenic 45.0%
TTCATGGAGCTATAGGAAGC+AGG - chr6_2:1294011-1294030 Msa0903860:CDS 45.0%
ATGTCATCATTGAGCCTCTC+AGG - chr6_2:1295570-1295589 Msa0903860:intron 45.0%
TGGACAAGGACAGTGAGATA+AGG - chr6_2:1295769-1295788 Msa0903860:CDS 45.0%
GGACAAGGACAGTGAGATAA+GGG - chr6_2:1295770-1295789 Msa0903860:CDS 45.0%
!! AAAAATTAAATAAAAAGAAA+GGG + chr6_2:1294506-1294525 None:intergenic 5.0%
!! AAAAAATTAAATAAAAAGAA+AGG + chr6_2:1294507-1294526 None:intergenic 5.0%
!! AAAAATTAAATAAAAAGAAA+GGG + chr6_2:1294506-1294525 None:intergenic 5.0%
!! AAAAAATTAAATAAAAAGAA+AGG + chr6_2:1294507-1294526 None:intergenic 5.0%
GCAGTCTGCAACCGCAAATG+TGG + chr6_2:1293718-1293737 None:intergenic 55.0%
GCAGTCTGCAACCGCAAATG+TGG + chr6_2:1293718-1293737 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 1293462 1295833 1293462 ID=Msa0903860;Name=Msa0903860
chr6_2 mRNA 1293462 1295833 1293462 ID=Msa0903860-mRNA-1;Parent=Msa0903860;Name=Msa0903860-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|344
chr6_2 exon 1295701 1295833 1295701 ID=Msa0903860-mRNA-1:exon:536;Parent=Msa0903860-mRNA-1
chr6_2 exon 1295263 1295392 1295263 ID=Msa0903860-mRNA-1:exon:535;Parent=Msa0903860-mRNA-1
chr6_2 exon 1293462 1294233 1293462 ID=Msa0903860-mRNA-1:exon:534;Parent=Msa0903860-mRNA-1
chr6_2 CDS 1295701 1295833 1295701 ID=Msa0903860-mRNA-1:cds;Parent=Msa0903860-mRNA-1
chr6_2 CDS 1295263 1295392 1295263 ID=Msa0903860-mRNA-1:cds;Parent=Msa0903860-mRNA-1
chr6_2 CDS 1293462 1294233 1293462 ID=Msa0903860-mRNA-1:cds;Parent=Msa0903860-mRNA-1
Gene Sequence

>Msa0903860

ATGGGAAGGCCTCCTTGTTGTGATAAAACCAATGTGAAAAGAGGTTTATGGACTCCTGAGGAAGATGCTAAAATACTTGCTTATGTAGCCAATCATGGAATTGGAAATTGGACAGCTGTTCCAAAGAAAGCAGGGTTGAATAGGTGTGGTAAGAGTTGCAGGCTAAGATATACAAATTATCTAAGACCTGATCTCAAGCATGATAGTTTTACACCTGAGGAAGAAGAGCTGATTATTACCCTTCATGGAGCTATAGGAAGCAGATGGTCTTGTATTGCAAAAAGACTACCTGGAAGAACAGACAATGATGTCAAGAATTATTGGAACACAAAACTAAGAAAGAAGCTTATGAAAATGGGAATTGATCCAGTAACTCATAAGCCAGTTTCACAAGTGATTTCTGACTTAGGAAACATTAGTAGCCTCACAACAACATCAAACTCTCAAAACCAAATGAATTTTGTCAATAACACCCCAATATTGGAACACACAAAAGATGAACAAGTTCAACCAATGCAAAATCAAGTTCAATATCACCAATTCACAAACCAAGAGAATTTCCAACAACATGTCTTAAGTGAAGTTGCATCTTCAAGTTCATCTTCGTCTTCTTCTAATCTCACTAGGCTAAGCTCGCCGATTTCGTACTCTTGCAACACTTCACAAGCTCAAATTAACTCTAACTTTGAATGGAGTGATTTTCTTCACAATGATGAGCCTTTAGTGTGGACAGAAATTCAACAAATTCAACAATGTGACATACAAAGGGTAATGTCATCATTGAGCCTCTCAGGTATAATGCAAAGTGAAGGTGAAATTTCCAATAATTTCAATAGTAATGGTGATGATAAACAAGGTGGTTCAAGTGAAGGTTTTGAGGATGTTGCTTGTGTTGCAAGCAAAGAATGTCAAGTTGATAAGAAATGTGAAGCAAATTCATTTTCAGGGAATTCATTTGTGGATGGTATTTTGGACAAGGACAGTGAGATAAGGGCAACATTTCCAGAAATTTTGGATGCTTCTTTTGATTATTAA
Protein sequence

>Msa0903860

MGRPPCCDKTNVKRGLWTPEEDAKILAYVANHGIGNWTAVPKKAGLNRCGKSCRLRYTNYLRPDLKHDSFTPEEEELIITLHGAIGSRWSCIAKRLPGRTDNDVKNYWNTKLRKKLMKMGIDPVTHKPVSQVISDLGNISSLTTTSNSQNQMNFVNNTPILEHTKDEQVQPMQNQVQYHQFTNQENFQQHVLSEVASSSSSSSSSNLTRLSSPISYSCNTSQAQINSNFEWSDFLHNDEPLVWTEIQQIQQCDIQRVMSSLSLSGIMQSEGEISNNFNSNGDDKQGGSSEGFEDVACVASKECQVDKKCEANSFSGNSFVDGILDKDSEIRATFPEILDASFDY*