Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0904470 | XP_013450912.1 | 84.000 | 225 | 13 | 3 | 1 | 225 | 1 | 202 | 1.56e-128 | 372 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0904470 | sp|Q9STS6|LBD27_ARATH | 55.340 | 103 | 46 | 0 | 5 | 107 | 30 | 132 | 4.47e-33 | 125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0904470 | TF | LOB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0904470 | MtrunA17_Chr6g0452671 | 84.000 | 225 | 13 | 3 | 1 | 225 | 1 | 202 | 1.43e-132 | 372 |
| Msa0904470 | MtrunA17_Chr6g0452661 | 46.586 | 249 | 87 | 7 | 9 | 231 | 7 | 235 | 1.13e-61 | 194 |
| Msa0904470 | MtrunA17_Chr5g0439111 | 46.914 | 243 | 93 | 8 | 9 | 230 | 7 | 234 | 2.58e-53 | 172 |
| Msa0904470 | MtrunA17_Chr6g0452691 | 52.439 | 164 | 65 | 4 | 1 | 160 | 1 | 155 | 8.58e-49 | 158 |
| Msa0904470 | MtrunA17_Chr4g0055441 | 51.786 | 168 | 53 | 5 | 12 | 178 | 3 | 143 | 2.20e-48 | 156 |
| Msa0904470 | MtrunA17_Chr4g0059901 | 50.450 | 111 | 55 | 0 | 5 | 115 | 4 | 114 | 1.55e-34 | 124 |
| Msa0904470 | MtrunA17_Chr8g0342351 | 55.000 | 100 | 45 | 0 | 8 | 107 | 9 | 108 | 1.04e-33 | 122 |
| Msa0904470 | MtrunA17_Chr2g0330201 | 47.706 | 109 | 57 | 0 | 8 | 116 | 16 | 124 | 3.94e-30 | 114 |
| Msa0904470 | MtrunA17_Chr3g0115431 | 44.000 | 100 | 56 | 0 | 9 | 108 | 7 | 106 | 1.40e-26 | 102 |
| Msa0904470 | MtrunA17_Chr2g0311601 | 38.182 | 110 | 68 | 0 | 8 | 117 | 10 | 119 | 1.46e-26 | 100 |
| Msa0904470 | MtrunA17_Chr7g0227511 | 34.459 | 148 | 95 | 1 | 8 | 153 | 8 | 155 | 1.49e-26 | 101 |
| Msa0904470 | MtrunA17_Chr5g0402611 | 43.299 | 97 | 55 | 0 | 12 | 108 | 9 | 105 | 2.52e-26 | 103 |
| Msa0904470 | MtrunA17_Chr6g0449651 | 41.176 | 102 | 60 | 0 | 6 | 107 | 62 | 163 | 2.96e-26 | 101 |
| Msa0904470 | MtrunA17_Chr4g0043421 | 36.691 | 139 | 82 | 2 | 12 | 150 | 16 | 148 | 7.09e-26 | 99.4 |
| Msa0904470 | MtrunA17_Chr8g0353981 | 50.633 | 79 | 39 | 0 | 12 | 90 | 8 | 86 | 1.45e-25 | 100 |
| Msa0904470 | MtrunA17_Chr6g0449641 | 40.000 | 100 | 60 | 0 | 8 | 107 | 6 | 105 | 2.75e-25 | 97.1 |
| Msa0904470 | MtrunA17_Chr3g0106101 | 41.414 | 99 | 58 | 0 | 6 | 104 | 2 | 100 | 3.41e-25 | 97.8 |
| Msa0904470 | MtrunA17_Chr5g0444351 | 40.206 | 97 | 58 | 0 | 12 | 108 | 6 | 102 | 4.49e-25 | 96.7 |
| Msa0904470 | MtrunA17_Chr3g0117121 | 41.667 | 96 | 56 | 0 | 12 | 107 | 11 | 106 | 7.29e-25 | 97.4 |
| Msa0904470 | MtrunA17_Chr3g0114061 | 39.394 | 99 | 60 | 0 | 6 | 104 | 3 | 101 | 8.20e-25 | 96.3 |
| Msa0904470 | MtrunA17_Chr3g0097221 | 43.299 | 97 | 55 | 0 | 12 | 108 | 8 | 104 | 1.30e-24 | 99.0 |
| Msa0904470 | MtrunA17_Chr4g0058651 | 39.583 | 96 | 58 | 0 | 12 | 107 | 12 | 107 | 1.54e-24 | 96.3 |
| Msa0904470 | MtrunA17_Chr7g0225111 | 39.623 | 106 | 64 | 0 | 12 | 117 | 6 | 111 | 2.87e-24 | 93.6 |
| Msa0904470 | MtrunA17_Chr6g0449311 | 51.261 | 119 | 47 | 3 | 39 | 149 | 1 | 116 | 5.33e-24 | 93.6 |
| Msa0904470 | MtrunA17_Chr5g0437571 | 46.835 | 79 | 42 | 0 | 12 | 90 | 7 | 85 | 1.07e-23 | 93.6 |
| Msa0904470 | MtrunA17_Chr4g0030001 | 35.625 | 160 | 84 | 5 | 12 | 160 | 25 | 176 | 1.93e-23 | 93.6 |
| Msa0904470 | MtrunA17_Chr5g0438091 | 34.711 | 121 | 75 | 1 | 7 | 127 | 35 | 151 | 2.51e-23 | 93.6 |
| Msa0904470 | MtrunA17_Chr5g0437401 | 38.318 | 107 | 66 | 0 | 8 | 114 | 8 | 114 | 1.68e-22 | 90.9 |
| Msa0904470 | MtrunA17_Chr1g0200201 | 34.965 | 143 | 85 | 2 | 12 | 150 | 73 | 211 | 2.86e-22 | 91.3 |
| Msa0904470 | MtrunA17_Chr5g0432451 | 37.255 | 102 | 64 | 0 | 7 | 108 | 39 | 140 | 4.47e-22 | 90.9 |
| Msa0904470 | MtrunA17_Chr3g0129071 | 37.255 | 102 | 64 | 0 | 7 | 108 | 43 | 144 | 6.24e-22 | 90.9 |
| Msa0904470 | MtrunA17_Chr3g0113891 | 43.529 | 85 | 48 | 0 | 8 | 92 | 11 | 95 | 1.29e-21 | 88.6 |
| Msa0904470 | MtrunA17_Chr4g0040831 | 38.182 | 110 | 65 | 1 | 4 | 113 | 8 | 114 | 3.80e-21 | 87.8 |
| Msa0904470 | MtrunA17_Chr8g0374591 | 36.364 | 99 | 63 | 0 | 10 | 108 | 7 | 105 | 7.74e-21 | 85.1 |
| Msa0904470 | MtrunA17_Chr7g0260971 | 37.168 | 113 | 70 | 1 | 2 | 113 | 5 | 117 | 8.12e-20 | 84.7 |
| Msa0904470 | MtrunA17_Chr8g0374601 | 37.374 | 99 | 62 | 0 | 10 | 108 | 25 | 123 | 2.03e-18 | 82.0 |
| Msa0904470 | MtrunA17_Chr6g0460951 | 34.259 | 108 | 70 | 1 | 12 | 118 | 41 | 148 | 2.06e-18 | 80.9 |
| Msa0904470 | MtrunA17_Chr8g0351721 | 38.614 | 101 | 61 | 1 | 12 | 111 | 19 | 119 | 1.49e-17 | 78.6 |
| Msa0904470 | MtrunA17_Chr4g0046201 | 40.000 | 80 | 48 | 0 | 11 | 90 | 6 | 85 | 2.71e-16 | 75.9 |
| Msa0904470 | MtrunA17_Chr5g0435641 | 32.990 | 97 | 64 | 1 | 10 | 105 | 6 | 102 | 6.19e-16 | 73.6 |
| Msa0904470 | MtrunA17_Chr8g0374581 | 36.000 | 100 | 63 | 1 | 10 | 108 | 7 | 106 | 7.32e-16 | 74.3 |
| Msa0904470 | MtrunA17_Chr1g0184281 | 35.714 | 98 | 62 | 1 | 12 | 108 | 16 | 113 | 1.37e-15 | 73.2 |
| Msa0904470 | MtrunA17_Chr6g0460941 | 32.979 | 94 | 62 | 1 | 6 | 98 | 2 | 95 | 1.45e-15 | 70.1 |
| Msa0904470 | MtrunA17_Chr1g0184271 | 40.741 | 81 | 47 | 1 | 12 | 91 | 13 | 93 | 1.84e-15 | 73.2 |
| Msa0904470 | MtrunA17_Chr8g0351701 | 34.694 | 98 | 63 | 1 | 12 | 108 | 24 | 121 | 3.31e-15 | 72.4 |
| Msa0904470 | MtrunA17_Chr7g0261031 | 40.741 | 81 | 47 | 1 | 12 | 91 | 9 | 89 | 7.64e-15 | 71.2 |
| Msa0904470 | MtrunA17_Chr7g0245871 | 33.673 | 98 | 64 | 1 | 12 | 108 | 28 | 125 | 1.39e-14 | 70.9 |
| Msa0904470 | MtrunA17_Chr2g0326041 | 56.250 | 48 | 21 | 0 | 12 | 59 | 34 | 81 | 1.57e-14 | 67.0 |
| Msa0904470 | MtrunA17_Chr7g0245861 | 37.363 | 91 | 53 | 3 | 1 | 87 | 1 | 91 | 1.48e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0904470 | AT3G47870.1 | 55.340 | 103 | 46 | 0 | 5 | 107 | 30 | 132 | 4.54e-34 | 125 |
| Msa0904470 | AT3G13850.1 | 53.061 | 98 | 46 | 0 | 10 | 107 | 35 | 132 | 1.91e-30 | 114 |
| Msa0904470 | AT1G72980.1 | 45.238 | 126 | 65 | 2 | 6 | 128 | 8 | 132 | 4.04e-29 | 109 |
| Msa0904470 | AT1G65620.1 | 49.398 | 83 | 42 | 0 | 8 | 90 | 6 | 88 | 2.19e-26 | 102 |
| Msa0904470 | AT1G65620.4 | 49.398 | 83 | 42 | 0 | 8 | 90 | 6 | 88 | 2.19e-26 | 102 |
| Msa0904470 | AT1G65620.3 | 49.398 | 83 | 42 | 0 | 8 | 90 | 6 | 88 | 2.19e-26 | 102 |
| Msa0904470 | AT1G65620.5 | 49.398 | 83 | 42 | 0 | 8 | 90 | 6 | 88 | 2.19e-26 | 102 |
| Msa0904470 | AT1G65620.2 | 49.398 | 83 | 42 | 0 | 8 | 90 | 6 | 88 | 2.19e-26 | 102 |
| Msa0904470 | AT3G26660.1 | 43.158 | 95 | 54 | 0 | 10 | 104 | 4 | 98 | 2.20e-26 | 99.4 |
| Msa0904470 | AT3G27650.1 | 44.330 | 97 | 54 | 0 | 8 | 104 | 36 | 132 | 2.26e-26 | 100 |
| Msa0904470 | AT3G26620.1 | 43.158 | 95 | 54 | 0 | 10 | 104 | 4 | 98 | 2.67e-26 | 99.4 |
| Msa0904470 | AT5G66870.1 | 38.835 | 103 | 63 | 0 | 6 | 108 | 2 | 104 | 4.03e-25 | 101 |
| Msa0904470 | AT2G30130.1 | 41.414 | 99 | 58 | 0 | 6 | 104 | 3 | 101 | 1.29e-24 | 97.1 |
| Msa0904470 | AT1G31320.1 | 46.835 | 79 | 42 | 0 | 12 | 90 | 14 | 92 | 1.68e-24 | 96.3 |
| Msa0904470 | AT5G63090.4 | 38.235 | 102 | 63 | 0 | 12 | 113 | 12 | 113 | 4.98e-24 | 95.5 |
| Msa0904470 | AT5G63090.3 | 38.235 | 102 | 63 | 0 | 12 | 113 | 12 | 113 | 4.98e-24 | 95.5 |
| Msa0904470 | AT5G63090.2 | 38.235 | 102 | 63 | 0 | 12 | 113 | 12 | 113 | 4.98e-24 | 95.5 |
| Msa0904470 | AT5G63090.1 | 38.235 | 102 | 63 | 0 | 12 | 113 | 12 | 113 | 4.98e-24 | 95.5 |
| Msa0904470 | AT1G16530.1 | 38.393 | 112 | 68 | 1 | 6 | 116 | 9 | 120 | 1.49e-23 | 93.6 |
| Msa0904470 | AT1G07900.1 | 38.462 | 117 | 62 | 2 | 12 | 125 | 34 | 143 | 2.50e-22 | 90.9 |
| Msa0904470 | AT2G23660.2 | 38.614 | 101 | 62 | 0 | 8 | 108 | 2 | 102 | 6.88e-22 | 92.4 |
| Msa0904470 | AT2G23660.3 | 38.614 | 101 | 62 | 0 | 8 | 108 | 2 | 102 | 6.88e-22 | 92.4 |
| Msa0904470 | AT2G23660.1 | 38.614 | 101 | 62 | 0 | 8 | 108 | 2 | 102 | 6.88e-22 | 92.4 |
| Msa0904470 | AT2G30340.2 | 36.275 | 102 | 65 | 0 | 7 | 108 | 49 | 150 | 8.19e-22 | 91.3 |
| Msa0904470 | AT2G30340.1 | 36.275 | 102 | 65 | 0 | 7 | 108 | 48 | 149 | 1.09e-21 | 91.3 |
| Msa0904470 | AT2G40470.2 | 36.275 | 102 | 65 | 0 | 7 | 108 | 16 | 117 | 2.68e-21 | 88.6 |
| Msa0904470 | AT2G28500.1 | 39.048 | 105 | 57 | 1 | 12 | 116 | 56 | 153 | 4.91e-21 | 88.6 |
| Msa0904470 | AT2G40470.1 | 36.275 | 102 | 65 | 0 | 7 | 108 | 41 | 142 | 5.86e-21 | 88.2 |
| Msa0904470 | AT3G50510.1 | 38.000 | 100 | 62 | 0 | 9 | 108 | 10 | 109 | 2.89e-20 | 85.9 |
| Msa0904470 | AT3G50510.2 | 38.000 | 100 | 62 | 0 | 9 | 108 | 10 | 109 | 2.89e-20 | 85.9 |
| Msa0904470 | AT3G11090.1 | 35.135 | 111 | 71 | 1 | 8 | 117 | 8 | 118 | 5.52e-20 | 84.0 |
| Msa0904470 | AT5G15060.1 | 45.122 | 82 | 43 | 1 | 3 | 82 | 9 | 90 | 1.06e-19 | 82.8 |
| Msa0904470 | AT1G06280.1 | 39.640 | 111 | 56 | 2 | 10 | 120 | 23 | 122 | 4.93e-19 | 82.8 |
| Msa0904470 | AT3G03760.1 | 34.906 | 106 | 68 | 1 | 12 | 116 | 52 | 157 | 1.44e-17 | 80.1 |
| Msa0904470 | AT2G42430.1 | 40.659 | 91 | 53 | 1 | 2 | 91 | 6 | 96 | 2.05e-17 | 79.0 |
| Msa0904470 | AT4G00220.1 | 37.500 | 96 | 59 | 1 | 14 | 108 | 20 | 115 | 2.37e-16 | 75.9 |
| Msa0904470 | AT2G42440.1 | 33.094 | 139 | 74 | 4 | 12 | 149 | 8 | 128 | 1.09e-15 | 74.3 |
| Msa0904470 | AT5G35900.1 | 29.000 | 100 | 71 | 0 | 9 | 108 | 3 | 102 | 1.11e-15 | 73.6 |
| Msa0904470 | AT3G58190.1 | 37.755 | 98 | 60 | 1 | 12 | 108 | 12 | 109 | 1.32e-15 | 73.6 |
| Msa0904470 | AT5G06080.1 | 33.913 | 115 | 71 | 3 | 11 | 124 | 7 | 117 | 1.49e-15 | 72.8 |
| Msa0904470 | AT4G00210.1 | 34.211 | 114 | 74 | 1 | 12 | 124 | 12 | 125 | 2.48e-15 | 72.8 |
| Msa0904470 | AT2G19820.1 | 35.088 | 114 | 65 | 3 | 1 | 112 | 1 | 107 | 3.36e-15 | 70.1 |
| Msa0904470 | AT2G31310.1 | 35.632 | 87 | 55 | 1 | 6 | 91 | 2 | 88 | 7.21e-14 | 68.2 |
| Msa0904470 | AT2G45420.1 | 32.292 | 96 | 64 | 1 | 14 | 108 | 40 | 135 | 7.74e-14 | 69.3 |
| Msa0904470 | AT2G45410.1 | 33.621 | 116 | 74 | 3 | 14 | 127 | 19 | 133 | 3.58e-13 | 66.6 |
Find 42 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCATTGTGAAGAATTAT+TGG | 0.154703 | 6_2:-2136119 | Msa0904470:CDS |
| GTAGTTCAAAATTTGATTTA+AGG | 0.221208 | 6_2:-2136087 | Msa0904470:CDS |
| CTTTCTTCTTTGGAATTTGC+AGG | 0.258062 | 6_2:+2136687 | None:intergenic |
| GAAGAATTATTGGATCTTAA+TGG | 0.282033 | 6_2:-2136109 | Msa0904470:CDS |
| GGTTTATCAGCAGGAAAATA+AGG | 0.329247 | 6_2:+2136640 | None:intergenic |
| TAGTTCAAAATTTGATTTAA+GGG | 0.335918 | 6_2:-2136086 | Msa0904470:CDS |
| AAGTCTGGTTTGGTATCAAT+TGG | 0.352922 | 6_2:+2136256 | None:intergenic |
| ATAAAATTAGTTTCAAAGTC+TGG | 0.359506 | 6_2:+2136241 | None:intergenic |
| AAAATTTGATTTAAGGGAAA+AGG | 0.388332 | 6_2:-2136080 | Msa0904470:CDS |
| CTTTAATATCTTCGATATGT+TGG | 0.391762 | 6_2:+2136579 | None:intergenic |
| TTATGAGGGATGTCATAATA+AGG | 0.392849 | 6_2:+2136292 | None:intergenic |
| AAAATATCAGATGCTGATAA+AGG | 0.393271 | 6_2:-2136055 | Msa0904470:CDS |
| ATTAGTTTCAAAGTCTGGTT+TGG | 0.401491 | 6_2:+2136246 | None:intergenic |
| GGGTTAATAGTAACATTATG+AGG | 0.404840 | 6_2:+2136277 | None:intergenic |
| GATGTTATTATGATGTATTA+TGG | 0.406805 | 6_2:-2136466 | Msa0904470:CDS |
| TCAGCCGATCATTTAGCAAT+TGG | 0.409945 | 6_2:+2134734 | None:intergenic |
| ACATCAAGACATCCACCAAC+AGG | 0.415425 | 6_2:+2136484 | None:intergenic |
| ATTCTTACTAGATCATTGTA+AGG | 0.440710 | 6_2:-2136404 | Msa0904470:CDS |
| GGCAACGCTCATCGTTTGTT+CGG | 0.441079 | 6_2:-2136607 | Msa0904470:CDS |
| AGAATGATCAATTGATAAGT+AGG | 0.447717 | 6_2:+2136348 | None:intergenic |
| GAAGATATTAAAGCAAGTTA+AGG | 0.448622 | 6_2:-2136569 | Msa0904470:CDS |
| ATTAGTGGTGTTAGCAATAG+TGG | 0.455191 | 6_2:-2136193 | Msa0904470:CDS |
| AACACTTGTGGTTTATCAGC+AGG | 0.459111 | 6_2:+2136631 | None:intergenic |
| GGAACTTGAGTGCTACTAGA+AGG | 0.476590 | 6_2:+2136319 | None:intergenic |
| AGTCTGGTTTGGTATCAATT+GGG | 0.496674 | 6_2:+2136257 | None:intergenic |
| GCTGATAAACCACAAGTGTT+CGG | 0.498732 | 6_2:-2136628 | Msa0904470:CDS |
| AGGGTTACACAATTGATTAG+TGG | 0.501559 | 6_2:-2136208 | Msa0904470:CDS |
| GGGATGTCATAATAAGGATT+CGG | 0.510856 | 6_2:+2136298 | None:intergenic |
| CGTGCTCAATTCCCTGTTGG+TGG | 0.544713 | 6_2:-2136496 | Msa0904470:CDS |
| GAATGATCAATTGATAAGTA+GGG | 0.551295 | 6_2:+2136349 | None:intergenic |
| GGTTAATAGTAACATTATGA+GGG | 0.554191 | 6_2:+2136278 | None:intergenic |
| GATCCAATAATTCTTCACAA+TGG | 0.560190 | 6_2:+2136116 | None:intergenic |
| TGAGCGTTGCCGAACACTTG+TGG | 0.583347 | 6_2:+2136619 | None:intergenic |
| ATGCGTGCTCAATTCCCTGT+TGG | 0.591693 | 6_2:-2136499 | Msa0904470:CDS |
| TAGTGGTGGTGGCAATGCAA+TGG | 0.604784 | 6_2:-2136176 | Msa0904470:CDS |
| GGTGTTAGCAATAGTGGTGG+TGG | 0.623088 | 6_2:-2136187 | Msa0904470:CDS |
| CATCAAGACATCCACCAACA+GGG | 0.653135 | 6_2:+2136485 | None:intergenic |
| TGCTGATAAAGGAGTAACTG+AGG | 0.670712 | 6_2:-2136044 | Msa0904470:intron |
| CAACAGAGGAGACACAAGCA+AGG | 0.679554 | 6_2:-2136719 | Msa0904470:CDS |
| TCTAACTTGATGGTAACACA+AGG | 0.694400 | 6_2:-2136145 | Msa0904470:CDS |
| TACCTAATGAATATCAACAG+AGG | 0.696712 | 6_2:-2136733 | None:intergenic |
| AGTGGTGTTAGCAATAGTGG+TGG | 0.717746 | 6_2:-2136190 | Msa0904470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAATTATTATTATTTT+TGG | - | chr6_2:2135466-2135485 | Msa0904470:intron | 0.0% |
| !!! | TTTTAATTATTATTATTTTT+GGG | - | chr6_2:2135467-2135486 | Msa0904470:intron | 0.0% |
| !!! | ATTTTAATTATTATTATTTT+TGG | - | chr6_2:2135466-2135485 | Msa0904470:intron | 0.0% |
| !!! | TTTTAATTATTATTATTTTT+GGG | - | chr6_2:2135467-2135486 | Msa0904470:intron | 0.0% |
| !!! | TTTTGCTAAAAAAATTATTA+TGG | + | chr6_2:2135806-2135825 | None:intergenic | 10.0% |
| !! | TTAAACAAAATTCAAAATAA+AGG | + | chr6_2:2135901-2135920 | None:intergenic | 10.0% |
| !!! | GATTTTTTAAAAAACATATT+CGG | + | chr6_2:2136134-2136153 | None:intergenic | 10.0% |
| !!! | ATGTTTTTTAAAAAATCAAT+CGG | - | chr6_2:2136137-2136156 | Msa0904470:CDS | 10.0% |
| !!! | TTTTGCTAAAAAAATTATTA+TGG | + | chr6_2:2135806-2135825 | None:intergenic | 10.0% |
| !! | TTAAACAAAATTCAAAATAA+AGG | + | chr6_2:2135901-2135920 | None:intergenic | 10.0% |
| !!! | GATTTTTTAAAAAACATATT+CGG | + | chr6_2:2136134-2136153 | None:intergenic | 10.0% |
| !!! | ATGTTTTTTAAAAAATCAAT+CGG | - | chr6_2:2136137-2136156 | Msa0904470:CDS | 10.0% |
| !!! | TAGTTCAAAATTTGATTTAA+GGG | - | chr6_2:2135383-2135402 | Msa0904470:intron | 15.0% |
| !! | TAAAGATATGTAATTAATGA+AGG | + | chr6_2:2135582-2135601 | None:intergenic | 15.0% |
| !! | TACATATCTTTAATCAATAT+AGG | - | chr6_2:2135590-2135609 | Msa0904470:intron | 15.0% |
| !!! | TTTAAGTTTAACCATTTTTT+CGG | - | chr6_2:2135841-2135860 | Msa0904470:intron | 15.0% |
| !!! | TTAACATTTTTATCCTAAAA+AGG | - | chr6_2:2135952-2135971 | Msa0904470:intron | 15.0% |
| !! | ACATTAAAACTAATCAAATT+AGG | - | chr6_2:2136336-2136355 | Msa0904470:CDS | 15.0% |
| !! | CATTAAAACTAATCAAATTA+GGG | - | chr6_2:2136337-2136356 | Msa0904470:CDS | 15.0% |
| !! | ATTAAAACTAATCAAATTAG+GGG | - | chr6_2:2136338-2136357 | Msa0904470:CDS | 15.0% |
| !!! | GTTTTTATAAGTTCTATATA+TGG | - | chr6_2:2136576-2136595 | Msa0904470:CDS | 15.0% |
| !!! | TAGTTCAAAATTTGATTTAA+GGG | - | chr6_2:2135383-2135402 | Msa0904470:intron | 15.0% |
| !! | TAAAGATATGTAATTAATGA+AGG | + | chr6_2:2135582-2135601 | None:intergenic | 15.0% |
| !! | TACATATCTTTAATCAATAT+AGG | - | chr6_2:2135590-2135609 | Msa0904470:intron | 15.0% |
| !!! | TTTAAGTTTAACCATTTTTT+CGG | - | chr6_2:2135841-2135860 | Msa0904470:intron | 15.0% |
| !!! | TTAACATTTTTATCCTAAAA+AGG | - | chr6_2:2135952-2135971 | Msa0904470:intron | 15.0% |
| !! | ACATTAAAACTAATCAAATT+AGG | - | chr6_2:2136336-2136355 | Msa0904470:CDS | 15.0% |
| !! | CATTAAAACTAATCAAATTA+GGG | - | chr6_2:2136337-2136356 | Msa0904470:CDS | 15.0% |
| !! | ATTAAAACTAATCAAATTAG+GGG | - | chr6_2:2136338-2136357 | Msa0904470:CDS | 15.0% |
| !!! | GTTTTTATAAGTTCTATATA+TGG | - | chr6_2:2136576-2136595 | Msa0904470:CDS | 15.0% |
| !!! | GAAATCAATTATTTTTGAGT+CGG | - | chr6_2:2134945-2134964 | Msa0904470:intron | 20.0% |
| !! | GATGTTATTATGATGTATTA+TGG | - | chr6_2:2135003-2135022 | Msa0904470:intron | 20.0% |
| !!! | ATAAAATTAGTTTCAAAGTC+TGG | + | chr6_2:2135231-2135250 | None:intergenic | 20.0% |
| !!! | AGACTTTGAAACTAATTTTA+TGG | - | chr6_2:2135230-2135249 | Msa0904470:intron | 20.0% |
| !!! | GTAGTTCAAAATTTGATTTA+AGG | - | chr6_2:2135382-2135401 | Msa0904470:intron | 20.0% |
| !!! | AAAATTTGATTTAAGGGAAA+AGG | - | chr6_2:2135389-2135408 | Msa0904470:intron | 20.0% |
| !!! | AGAAAGTATGAAAGTTTTTA+GGG | + | chr6_2:2136203-2136222 | None:intergenic | 20.0% |
| !!! | AAGAAAGTATGAAAGTTTTT+AGG | + | chr6_2:2136204-2136223 | None:intergenic | 20.0% |
| !!! | TGATTAGTTTTAATGTAACA+AGG | + | chr6_2:2136332-2136351 | None:intergenic | 20.0% |
| !! | AAATAAAAGACAATGTGTTA+AGG | + | chr6_2:2136418-2136437 | None:intergenic | 20.0% |
| !!! | GAAATCAATTATTTTTGAGT+CGG | - | chr6_2:2134945-2134964 | Msa0904470:intron | 20.0% |
| !! | GATGTTATTATGATGTATTA+TGG | - | chr6_2:2135003-2135022 | Msa0904470:intron | 20.0% |
| !!! | ATAAAATTAGTTTCAAAGTC+TGG | + | chr6_2:2135231-2135250 | None:intergenic | 20.0% |
| !!! | AGACTTTGAAACTAATTTTA+TGG | - | chr6_2:2135230-2135249 | Msa0904470:intron | 20.0% |
| !!! | GTAGTTCAAAATTTGATTTA+AGG | - | chr6_2:2135382-2135401 | Msa0904470:intron | 20.0% |
| !!! | AAAATTTGATTTAAGGGAAA+AGG | - | chr6_2:2135389-2135408 | Msa0904470:intron | 20.0% |
| !!! | AGAAAGTATGAAAGTTTTTA+GGG | + | chr6_2:2136203-2136222 | None:intergenic | 20.0% |
| !!! | AAGAAAGTATGAAAGTTTTT+AGG | + | chr6_2:2136204-2136223 | None:intergenic | 20.0% |
| !!! | TGATTAGTTTTAATGTAACA+AGG | + | chr6_2:2136332-2136351 | None:intergenic | 20.0% |
| !! | AAATAAAAGACAATGTGTTA+AGG | + | chr6_2:2136418-2136437 | None:intergenic | 20.0% |
| ! | CTTTAATATCTTCGATATGT+TGG | + | chr6_2:2134893-2134912 | None:intergenic | 25.0% |
| ! | GAAGATATTAAAGCAAGTTA+AGG | - | chr6_2:2134900-2134919 | Msa0904470:intron | 25.0% |
| ! | ATTCTTACTAGATCATTGTA+AGG | - | chr6_2:2135065-2135084 | Msa0904470:intron | 25.0% |
| ! | GAATGATCAATTGATAAGTA+GGG | + | chr6_2:2135123-2135142 | None:intergenic | 25.0% |
| ! | AGAATGATCAATTGATAAGT+AGG | + | chr6_2:2135124-2135143 | None:intergenic | 25.0% |
| ! | GGTTAATAGTAACATTATGA+GGG | + | chr6_2:2135194-2135213 | None:intergenic | 25.0% |
| ! | ATTCCATTGTGAAGAATTAT+TGG | - | chr6_2:2135350-2135369 | Msa0904470:intron | 25.0% |
| ! | GAAGAATTATTGGATCTTAA+TGG | - | chr6_2:2135360-2135379 | Msa0904470:intron | 25.0% |
| ! | AAAATATCAGATGCTGATAA+AGG | - | chr6_2:2135414-2135433 | Msa0904470:intron | 25.0% |
| ! | AAATTTCTCACATGATAAGA+AGG | - | chr6_2:2135653-2135672 | Msa0904470:intron | 25.0% |
| ! | TACTTAAATAACTTGGAATG+AGG | + | chr6_2:2135692-2135711 | None:intergenic | 25.0% |
| ! | TCGACAATACTTAAATAACT+TGG | + | chr6_2:2135699-2135718 | None:intergenic | 25.0% |
| !! | TGATTCTTTTAGTCCTTTTT+AGG | + | chr6_2:2135968-2135987 | None:intergenic | 25.0% |
| !!! | AGATCAATCTGAAACAATTT+TGG | - | chr6_2:2136010-2136029 | Msa0904470:intron | 25.0% |
| ! | AAAAATCAATCGGAAAAAAG+AGG | - | chr6_2:2136147-2136166 | Msa0904470:CDS | 25.0% |
| ! | TTAATGTAACAAGGAAACTA+AGG | + | chr6_2:2136323-2136342 | None:intergenic | 25.0% |
| ! | CTTTAATATCTTCGATATGT+TGG | + | chr6_2:2134893-2134912 | None:intergenic | 25.0% |
| ! | GAAGATATTAAAGCAAGTTA+AGG | - | chr6_2:2134900-2134919 | Msa0904470:intron | 25.0% |
| ! | ATTCTTACTAGATCATTGTA+AGG | - | chr6_2:2135065-2135084 | Msa0904470:intron | 25.0% |
| ! | GAATGATCAATTGATAAGTA+GGG | + | chr6_2:2135123-2135142 | None:intergenic | 25.0% |
| ! | AGAATGATCAATTGATAAGT+AGG | + | chr6_2:2135124-2135143 | None:intergenic | 25.0% |
| ! | GGTTAATAGTAACATTATGA+GGG | + | chr6_2:2135194-2135213 | None:intergenic | 25.0% |
| ! | ATTCCATTGTGAAGAATTAT+TGG | - | chr6_2:2135350-2135369 | Msa0904470:intron | 25.0% |
| ! | GAAGAATTATTGGATCTTAA+TGG | - | chr6_2:2135360-2135379 | Msa0904470:intron | 25.0% |
| ! | AAAATATCAGATGCTGATAA+AGG | - | chr6_2:2135414-2135433 | Msa0904470:intron | 25.0% |
| ! | AAATTTCTCACATGATAAGA+AGG | - | chr6_2:2135653-2135672 | Msa0904470:intron | 25.0% |
| ! | TACTTAAATAACTTGGAATG+AGG | + | chr6_2:2135692-2135711 | None:intergenic | 25.0% |
| ! | TCGACAATACTTAAATAACT+TGG | + | chr6_2:2135699-2135718 | None:intergenic | 25.0% |
| !! | TGATTCTTTTAGTCCTTTTT+AGG | + | chr6_2:2135968-2135987 | None:intergenic | 25.0% |
| !!! | AGATCAATCTGAAACAATTT+TGG | - | chr6_2:2136010-2136029 | Msa0904470:intron | 25.0% |
| ! | AAAAATCAATCGGAAAAAAG+AGG | - | chr6_2:2136147-2136166 | Msa0904470:CDS | 25.0% |
| ! | TTAATGTAACAAGGAAACTA+AGG | + | chr6_2:2136323-2136342 | None:intergenic | 25.0% |
| ! | CTTTTGAACACTTTCTTCTT+TGG | + | chr6_2:2134795-2134814 | None:intergenic | 30.0% |
| !!! | CAAGATTTTGTTGTTGCAAA+GGG | + | chr6_2:2135098-2135117 | None:intergenic | 30.0% |
| !!! | TCAAGATTTTGTTGTTGCAA+AGG | + | chr6_2:2135099-2135118 | None:intergenic | 30.0% |
| TTATGAGGGATGTCATAATA+AGG | + | chr6_2:2135180-2135199 | None:intergenic | 30.0% | |
| GGGTTAATAGTAACATTATG+AGG | + | chr6_2:2135195-2135214 | None:intergenic | 30.0% | |
| ! | ATTAGTTTCAAAGTCTGGTT+TGG | + | chr6_2:2135226-2135245 | None:intergenic | 30.0% |
| ! | TAATTTTATGGATGCAGCAA+GGG | - | chr6_2:2135242-2135261 | Msa0904470:intron | 30.0% |
| GGAAGAAAAATCTAACTTGA+TGG | - | chr6_2:2135314-2135333 | Msa0904470:intron | 30.0% | |
| GATCCAATAATTCTTCACAA+TGG | + | chr6_2:2135356-2135375 | None:intergenic | 30.0% | |
| ATTATGGAAAAGAATGTGCA+CGG | + | chr6_2:2135790-2135809 | None:intergenic | 30.0% | |
| !!! | GTTTAACCATTTTTTCGGAT+TGG | - | chr6_2:2135846-2135865 | Msa0904470:intron | 30.0% |
| AAAAAAGAGGTCCAACTTAA+AGG | - | chr6_2:2136160-2136179 | Msa0904470:CDS | 30.0% | |
| !!! | TCTCTCTTATTTTGATCACA+TGG | - | chr6_2:2136484-2136503 | Msa0904470:CDS | 30.0% |
| ! | CTTTTGAACACTTTCTTCTT+TGG | + | chr6_2:2134795-2134814 | None:intergenic | 30.0% |
| !!! | CAAGATTTTGTTGTTGCAAA+GGG | + | chr6_2:2135098-2135117 | None:intergenic | 30.0% |
| !!! | TCAAGATTTTGTTGTTGCAA+AGG | + | chr6_2:2135099-2135118 | None:intergenic | 30.0% |
| TTATGAGGGATGTCATAATA+AGG | + | chr6_2:2135180-2135199 | None:intergenic | 30.0% | |
| GGGTTAATAGTAACATTATG+AGG | + | chr6_2:2135195-2135214 | None:intergenic | 30.0% | |
| ! | ATTAGTTTCAAAGTCTGGTT+TGG | + | chr6_2:2135226-2135245 | None:intergenic | 30.0% |
| ! | TAATTTTATGGATGCAGCAA+GGG | - | chr6_2:2135242-2135261 | Msa0904470:intron | 30.0% |
| GGAAGAAAAATCTAACTTGA+TGG | - | chr6_2:2135314-2135333 | Msa0904470:intron | 30.0% | |
| GATCCAATAATTCTTCACAA+TGG | + | chr6_2:2135356-2135375 | None:intergenic | 30.0% | |
| ATTATGGAAAAGAATGTGCA+CGG | + | chr6_2:2135790-2135809 | None:intergenic | 30.0% | |
| !!! | GTTTAACCATTTTTTCGGAT+TGG | - | chr6_2:2135846-2135865 | Msa0904470:intron | 30.0% |
| AAAAAAGAGGTCCAACTTAA+AGG | - | chr6_2:2136160-2136179 | Msa0904470:CDS | 30.0% | |
| !!! | TCTCTCTTATTTTGATCACA+TGG | - | chr6_2:2136484-2136503 | Msa0904470:CDS | 30.0% |
| !! | CTTTCTTCTTTGGAATTTGC+AGG | + | chr6_2:2134785-2134804 | None:intergenic | 35.0% |
| GGTTTATCAGCAGGAAAATA+AGG | + | chr6_2:2134832-2134851 | None:intergenic | 35.0% | |
| GGGATGTCATAATAAGGATT+CGG | + | chr6_2:2135174-2135193 | None:intergenic | 35.0% | |
| !! | AGTCTGGTTTGGTATCAATT+GGG | + | chr6_2:2135215-2135234 | None:intergenic | 35.0% |
| !! | AAGTCTGGTTTGGTATCAAT+TGG | + | chr6_2:2135216-2135235 | None:intergenic | 35.0% |
| ! | CTAATTTTATGGATGCAGCA+AGG | - | chr6_2:2135241-2135260 | Msa0904470:intron | 35.0% |
| AGGGTTACACAATTGATTAG+TGG | - | chr6_2:2135261-2135280 | Msa0904470:intron | 35.0% | |
| ! | ATTAGTGGTGTTAGCAATAG+TGG | - | chr6_2:2135276-2135295 | Msa0904470:intron | 35.0% |
| ! | TCTAACTTGATGGTAACACA+AGG | - | chr6_2:2135324-2135343 | Msa0904470:intron | 35.0% |
| TCACATGATAAGAAGGTTGA+GGG | - | chr6_2:2135660-2135679 | Msa0904470:intron | 35.0% | |
| !! | AAACCTTGTGTTAGTTTGTG+CGG | + | chr6_2:2135726-2135745 | None:intergenic | 35.0% |
| GTCTCAAAACTTGTACATCT+TGG | - | chr6_2:2135874-2135893 | Msa0904470:intron | 35.0% | |
| ATTCTCAGATAAAACGTCCT+TGG | - | chr6_2:2136102-2136121 | Msa0904470:CDS | 35.0% | |
| ATGTCTACCATCCTTTAAGT+TGG | + | chr6_2:2136174-2136193 | None:intergenic | 35.0% | |
| AATTTCATGAAGTGTGTCAC+TGG | - | chr6_2:2136262-2136281 | Msa0904470:CDS | 35.0% | |
| ACACTAGATTGTGGAGAATA+GGG | + | chr6_2:2136299-2136318 | None:intergenic | 35.0% | |
| GCATGATCAAAAAATTGGTC+AGG | + | chr6_2:2136450-2136469 | None:intergenic | 35.0% | |
| GTCGAGCATGATCAAAAAAT+TGG | + | chr6_2:2136455-2136474 | None:intergenic | 35.0% | |
| !! | CTTTCTTCTTTGGAATTTGC+AGG | + | chr6_2:2134785-2134804 | None:intergenic | 35.0% |
| GGTTTATCAGCAGGAAAATA+AGG | + | chr6_2:2134832-2134851 | None:intergenic | 35.0% | |
| GGGATGTCATAATAAGGATT+CGG | + | chr6_2:2135174-2135193 | None:intergenic | 35.0% | |
| !! | AGTCTGGTTTGGTATCAATT+GGG | + | chr6_2:2135215-2135234 | None:intergenic | 35.0% |
| !! | AAGTCTGGTTTGGTATCAAT+TGG | + | chr6_2:2135216-2135235 | None:intergenic | 35.0% |
| ! | CTAATTTTATGGATGCAGCA+AGG | - | chr6_2:2135241-2135260 | Msa0904470:intron | 35.0% |
| AGGGTTACACAATTGATTAG+TGG | - | chr6_2:2135261-2135280 | Msa0904470:intron | 35.0% | |
| ! | ATTAGTGGTGTTAGCAATAG+TGG | - | chr6_2:2135276-2135295 | Msa0904470:intron | 35.0% |
| ! | TCTAACTTGATGGTAACACA+AGG | - | chr6_2:2135324-2135343 | Msa0904470:intron | 35.0% |
| TCACATGATAAGAAGGTTGA+GGG | - | chr6_2:2135660-2135679 | Msa0904470:intron | 35.0% | |
| !! | AAACCTTGTGTTAGTTTGTG+CGG | + | chr6_2:2135726-2135745 | None:intergenic | 35.0% |
| GTCTCAAAACTTGTACATCT+TGG | - | chr6_2:2135874-2135893 | Msa0904470:intron | 35.0% | |
| ATTCTCAGATAAAACGTCCT+TGG | - | chr6_2:2136102-2136121 | Msa0904470:CDS | 35.0% | |
| ATGTCTACCATCCTTTAAGT+TGG | + | chr6_2:2136174-2136193 | None:intergenic | 35.0% | |
| AATTTCATGAAGTGTGTCAC+TGG | - | chr6_2:2136262-2136281 | Msa0904470:CDS | 35.0% | |
| ACACTAGATTGTGGAGAATA+GGG | + | chr6_2:2136299-2136318 | None:intergenic | 35.0% | |
| GCATGATCAAAAAATTGGTC+AGG | + | chr6_2:2136450-2136469 | None:intergenic | 35.0% | |
| GTCGAGCATGATCAAAAAAT+TGG | + | chr6_2:2136455-2136474 | None:intergenic | 35.0% | |
| AACACTTGTGGTTTATCAGC+AGG | + | chr6_2:2134841-2134860 | None:intergenic | 40.0% | |
| GCTGATAAACCACAAGTGTT+CGG | - | chr6_2:2134841-2134860 | Msa0904470:intron | 40.0% | |
| TGCTGATAAAGGAGTAACTG+AGG | - | chr6_2:2135425-2135444 | Msa0904470:intron | 40.0% | |
| CTCACATGATAAGAAGGTTG+AGG | - | chr6_2:2135659-2135678 | Msa0904470:intron | 40.0% | |
| GCACAAACTAACACAAGGTT+TGG | - | chr6_2:2135725-2135744 | Msa0904470:intron | 40.0% | |
| CATGAGCCAATCCGAAAAAA+TGG | + | chr6_2:2135855-2135874 | None:intergenic | 40.0% | |
| AGTCGAAGCAAGACTATGTA+TGG | + | chr6_2:2136045-2136064 | None:intergenic | 40.0% | |
| AGATAAAACGTCCTTGGACT+GGG | - | chr6_2:2136108-2136127 | Msa0904470:CDS | 40.0% | |
| AAGAGGTCCAACTTAAAGGA+TGG | - | chr6_2:2136164-2136183 | Msa0904470:CDS | 40.0% | |
| CACACTAGATTGTGGAGAAT+AGG | + | chr6_2:2136300-2136319 | None:intergenic | 40.0% | |
| AACTAAGGCACACTAGATTG+TGG | + | chr6_2:2136308-2136327 | None:intergenic | 40.0% | |
| AACACTTGTGGTTTATCAGC+AGG | + | chr6_2:2134841-2134860 | None:intergenic | 40.0% | |
| GCTGATAAACCACAAGTGTT+CGG | - | chr6_2:2134841-2134860 | Msa0904470:intron | 40.0% | |
| TGCTGATAAAGGAGTAACTG+AGG | - | chr6_2:2135425-2135444 | Msa0904470:intron | 40.0% | |
| CTCACATGATAAGAAGGTTG+AGG | - | chr6_2:2135659-2135678 | Msa0904470:intron | 40.0% | |
| GCACAAACTAACACAAGGTT+TGG | - | chr6_2:2135725-2135744 | Msa0904470:intron | 40.0% | |
| CATGAGCCAATCCGAAAAAA+TGG | + | chr6_2:2135855-2135874 | None:intergenic | 40.0% | |
| AGTCGAAGCAAGACTATGTA+TGG | + | chr6_2:2136045-2136064 | None:intergenic | 40.0% | |
| AGATAAAACGTCCTTGGACT+GGG | - | chr6_2:2136108-2136127 | Msa0904470:CDS | 40.0% | |
| AAGAGGTCCAACTTAAAGGA+TGG | - | chr6_2:2136164-2136183 | Msa0904470:CDS | 40.0% | |
| CACACTAGATTGTGGAGAAT+AGG | + | chr6_2:2136300-2136319 | None:intergenic | 40.0% | |
| AACTAAGGCACACTAGATTG+TGG | + | chr6_2:2136308-2136327 | None:intergenic | 40.0% | |
| CATCAAGACATCCACCAACA+GGG | + | chr6_2:2134987-2135006 | None:intergenic | 45.0% | |
| ACATCAAGACATCCACCAAC+AGG | + | chr6_2:2134988-2135007 | None:intergenic | 45.0% | |
| ! | GGAACTTGAGTGCTACTAGA+AGG | + | chr6_2:2135153-2135172 | None:intergenic | 45.0% |
| ! | AGTGGTGTTAGCAATAGTGG+TGG | - | chr6_2:2135279-2135298 | Msa0904470:intron | 45.0% |
| TGTCCGCACAAACTAACACA+AGG | - | chr6_2:2135720-2135739 | Msa0904470:intron | 45.0% | |
| AAAGAATGTGCACGGCTGAA+AGG | + | chr6_2:2135782-2135801 | None:intergenic | 45.0% | |
| TCTTGCTTCGACTGTGAATG+AGG | - | chr6_2:2136052-2136071 | Msa0904470:CDS | 45.0% | |
| CAGATAAAACGTCCTTGGAC+TGG | - | chr6_2:2136107-2136126 | Msa0904470:CDS | 45.0% | |
| CATCAAGACATCCACCAACA+GGG | + | chr6_2:2134987-2135006 | None:intergenic | 45.0% | |
| ACATCAAGACATCCACCAAC+AGG | + | chr6_2:2134988-2135007 | None:intergenic | 45.0% | |
| ! | GGAACTTGAGTGCTACTAGA+AGG | + | chr6_2:2135153-2135172 | None:intergenic | 45.0% |
| ! | AGTGGTGTTAGCAATAGTGG+TGG | - | chr6_2:2135279-2135298 | Msa0904470:intron | 45.0% |
| TGTCCGCACAAACTAACACA+AGG | - | chr6_2:2135720-2135739 | Msa0904470:intron | 45.0% | |
| AAAGAATGTGCACGGCTGAA+AGG | + | chr6_2:2135782-2135801 | None:intergenic | 45.0% | |
| TCTTGCTTCGACTGTGAATG+AGG | - | chr6_2:2136052-2136071 | Msa0904470:CDS | 45.0% | |
| CAGATAAAACGTCCTTGGAC+TGG | - | chr6_2:2136107-2136126 | Msa0904470:CDS | 45.0% | |
| CAACAGAGGAGACACAAGCA+AGG | - | chr6_2:2134750-2134769 | Msa0904470:intron | 50.0% | |
| GGCAACGCTCATCGTTTGTT+CGG | - | chr6_2:2134862-2134881 | Msa0904470:intron | 50.0% | |
| ATGCGTGCTCAATTCCCTGT+TGG | - | chr6_2:2134970-2134989 | Msa0904470:intron | 50.0% | |
| GGTGTTAGCAATAGTGGTGG+TGG | - | chr6_2:2135282-2135301 | Msa0904470:intron | 50.0% | |
| !! | TAGTGGTGGTGGCAATGCAA+TGG | - | chr6_2:2135293-2135312 | Msa0904470:intron | 50.0% |
| ! | CAAGGTTTGGTCTTCTGCCA+TGG | - | chr6_2:2135738-2135757 | Msa0904470:intron | 50.0% |
| ACAGGTCTGGGAGATTTCCA+TGG | + | chr6_2:2135758-2135777 | None:intergenic | 50.0% | |
| GTGAATGAGGCTCATGCAAG+TGG | - | chr6_2:2136065-2136084 | Msa0904470:CDS | 50.0% | |
| AACATATTCGGCCCAGTCCA+AGG | + | chr6_2:2136122-2136141 | None:intergenic | 50.0% | |
| CAACAGAGGAGACACAAGCA+AGG | - | chr6_2:2134750-2134769 | Msa0904470:intron | 50.0% | |
| GGCAACGCTCATCGTTTGTT+CGG | - | chr6_2:2134862-2134881 | Msa0904470:intron | 50.0% | |
| ATGCGTGCTCAATTCCCTGT+TGG | - | chr6_2:2134970-2134989 | Msa0904470:intron | 50.0% | |
| GGTGTTAGCAATAGTGGTGG+TGG | - | chr6_2:2135282-2135301 | Msa0904470:intron | 50.0% | |
| !! | TAGTGGTGGTGGCAATGCAA+TGG | - | chr6_2:2135293-2135312 | Msa0904470:intron | 50.0% |
| ! | CAAGGTTTGGTCTTCTGCCA+TGG | - | chr6_2:2135738-2135757 | Msa0904470:intron | 50.0% |
| ACAGGTCTGGGAGATTTCCA+TGG | + | chr6_2:2135758-2135777 | None:intergenic | 50.0% | |
| GTGAATGAGGCTCATGCAAG+TGG | - | chr6_2:2136065-2136084 | Msa0904470:CDS | 50.0% | |
| AACATATTCGGCCCAGTCCA+AGG | + | chr6_2:2136122-2136141 | None:intergenic | 50.0% | |
| ! | TGAGCGTTGCCGAACACTTG+TGG | + | chr6_2:2134853-2134872 | None:intergenic | 55.0% |
| CGTGCTCAATTCCCTGTTGG+TGG | - | chr6_2:2134973-2134992 | Msa0904470:intron | 55.0% | |
| ! | CGGCTGAAAGGTACAGGTCT+GGG | + | chr6_2:2135770-2135789 | None:intergenic | 55.0% |
| ! | ACGGCTGAAAGGTACAGGTC+TGG | + | chr6_2:2135771-2135790 | None:intergenic | 55.0% |
| ! | TGTGCACGGCTGAAAGGTAC+AGG | + | chr6_2:2135776-2135795 | None:intergenic | 55.0% |
| ! | TGAGCGTTGCCGAACACTTG+TGG | + | chr6_2:2134853-2134872 | None:intergenic | 55.0% |
| CGTGCTCAATTCCCTGTTGG+TGG | - | chr6_2:2134973-2134992 | Msa0904470:intron | 55.0% | |
| ! | CGGCTGAAAGGTACAGGTCT+GGG | + | chr6_2:2135770-2135789 | None:intergenic | 55.0% |
| ! | ACGGCTGAAAGGTACAGGTC+TGG | + | chr6_2:2135771-2135790 | None:intergenic | 55.0% |
| ! | TGTGCACGGCTGAAAGGTAC+AGG | + | chr6_2:2135776-2135795 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 2134742 | 2136749 | 2134742 | ID=Msa0904470;Name=Msa0904470 |
| chr6_2 | mRNA | 2134742 | 2136749 | 2134742 | ID=Msa0904470-mRNA-1;Parent=Msa0904470;Name=Msa0904470-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|0.5|1|1|2|0|241 |
| chr6_2 | exon | 2136045 | 2136749 | 2136045 | ID=Msa0904470-mRNA-1:exon:696;Parent=Msa0904470-mRNA-1 |
| chr6_2 | exon | 2134742 | 2134762 | 2134742 | ID=Msa0904470-mRNA-1:exon:695;Parent=Msa0904470-mRNA-1 |
| chr6_2 | CDS | 2136045 | 2136749 | 2136045 | ID=Msa0904470-mRNA-1:cds;Parent=Msa0904470-mRNA-1 |
| chr6_2 | CDS | 2134742 | 2134762 | 2134742 | ID=Msa0904470-mRNA-1:cds;Parent=Msa0904470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
