Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0904510 | XP_013450912.1 | 84.000 | 225 | 13 | 3 | 1 | 225 | 1 | 202 | 1.54e-128 | 372 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0904510 | sp|Q9STS6|LBD27_ARATH | 55.340 | 103 | 46 | 0 | 5 | 107 | 30 | 132 | 4.33e-33 | 125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0904510 | TF | LOB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0904510 | MtrunA17_Chr6g0452671 | 84.000 | 225 | 13 | 3 | 1 | 225 | 1 | 202 | 1.42e-132 | 372 |
| Msa0904510 | MtrunA17_Chr6g0452661 | 46.586 | 249 | 87 | 7 | 9 | 231 | 7 | 235 | 1.47e-61 | 193 |
| Msa0904510 | MtrunA17_Chr5g0439111 | 46.914 | 243 | 93 | 8 | 9 | 230 | 7 | 234 | 2.82e-53 | 172 |
| Msa0904510 | MtrunA17_Chr6g0452691 | 52.439 | 164 | 65 | 4 | 1 | 160 | 1 | 155 | 6.34e-49 | 159 |
| Msa0904510 | MtrunA17_Chr4g0055441 | 51.786 | 168 | 53 | 5 | 12 | 178 | 3 | 143 | 2.32e-48 | 156 |
| Msa0904510 | MtrunA17_Chr4g0059901 | 50.450 | 111 | 55 | 0 | 5 | 115 | 4 | 114 | 1.25e-34 | 124 |
| Msa0904510 | MtrunA17_Chr8g0342351 | 55.000 | 100 | 45 | 0 | 8 | 107 | 9 | 108 | 1.07e-33 | 122 |
| Msa0904510 | MtrunA17_Chr2g0330201 | 48.148 | 108 | 56 | 0 | 8 | 115 | 16 | 123 | 4.38e-30 | 113 |
| Msa0904510 | MtrunA17_Chr2g0311601 | 38.182 | 110 | 68 | 0 | 8 | 117 | 10 | 119 | 7.95e-27 | 101 |
| Msa0904510 | MtrunA17_Chr3g0115431 | 44.000 | 100 | 56 | 0 | 9 | 108 | 7 | 106 | 1.27e-26 | 102 |
| Msa0904510 | MtrunA17_Chr7g0227511 | 34.459 | 148 | 95 | 1 | 8 | 153 | 8 | 155 | 2.05e-26 | 100 |
| Msa0904510 | MtrunA17_Chr5g0402611 | 43.299 | 97 | 55 | 0 | 12 | 108 | 9 | 105 | 2.58e-26 | 103 |
| Msa0904510 | MtrunA17_Chr6g0449651 | 41.176 | 102 | 60 | 0 | 6 | 107 | 62 | 163 | 2.90e-26 | 101 |
| Msa0904510 | MtrunA17_Chr4g0043421 | 48.101 | 79 | 41 | 0 | 12 | 90 | 16 | 94 | 7.80e-26 | 99.4 |
| Msa0904510 | MtrunA17_Chr8g0353981 | 50.633 | 79 | 39 | 0 | 12 | 90 | 8 | 86 | 1.43e-25 | 100 |
| Msa0904510 | MtrunA17_Chr6g0449641 | 38.739 | 111 | 66 | 1 | 8 | 118 | 6 | 114 | 2.61e-25 | 97.1 |
| Msa0904510 | MtrunA17_Chr3g0106101 | 41.414 | 99 | 58 | 0 | 6 | 104 | 2 | 100 | 3.34e-25 | 97.8 |
| Msa0904510 | MtrunA17_Chr5g0444351 | 40.206 | 97 | 58 | 0 | 12 | 108 | 6 | 102 | 4.39e-25 | 96.7 |
| Msa0904510 | MtrunA17_Chr3g0097221 | 42.453 | 106 | 61 | 0 | 12 | 117 | 8 | 113 | 6.06e-25 | 99.8 |
| Msa0904510 | MtrunA17_Chr3g0117121 | 41.667 | 96 | 56 | 0 | 12 | 107 | 11 | 106 | 7.22e-25 | 97.4 |
| Msa0904510 | MtrunA17_Chr3g0114061 | 39.394 | 99 | 60 | 0 | 6 | 104 | 3 | 101 | 8.03e-25 | 96.3 |
| Msa0904510 | MtrunA17_Chr7g0225111 | 40.566 | 106 | 63 | 0 | 12 | 117 | 6 | 111 | 8.33e-25 | 95.1 |
| Msa0904510 | MtrunA17_Chr4g0058651 | 39.583 | 96 | 58 | 0 | 12 | 107 | 12 | 107 | 1.59e-24 | 96.3 |
| Msa0904510 | MtrunA17_Chr6g0449311 | 52.101 | 119 | 46 | 3 | 39 | 149 | 1 | 116 | 2.14e-24 | 94.7 |
| Msa0904510 | MtrunA17_Chr5g0437571 | 46.835 | 79 | 42 | 0 | 12 | 90 | 7 | 85 | 1.06e-23 | 93.6 |
| Msa0904510 | MtrunA17_Chr5g0438091 | 36.364 | 110 | 70 | 0 | 7 | 116 | 35 | 144 | 2.29e-23 | 93.6 |
| Msa0904510 | MtrunA17_Chr4g0030001 | 35.000 | 160 | 85 | 5 | 12 | 160 | 25 | 176 | 5.35e-23 | 92.4 |
| Msa0904510 | MtrunA17_Chr5g0437401 | 38.318 | 107 | 66 | 0 | 8 | 114 | 8 | 114 | 1.61e-22 | 90.9 |
| Msa0904510 | MtrunA17_Chr5g0432451 | 37.255 | 102 | 64 | 0 | 7 | 108 | 39 | 140 | 4.33e-22 | 90.9 |
| Msa0904510 | MtrunA17_Chr3g0129071 | 37.255 | 102 | 64 | 0 | 7 | 108 | 43 | 144 | 6.44e-22 | 90.5 |
| Msa0904510 | MtrunA17_Chr1g0200201 | 34.266 | 143 | 86 | 2 | 12 | 150 | 73 | 211 | 8.70e-22 | 90.1 |
| Msa0904510 | MtrunA17_Chr3g0113891 | 43.529 | 85 | 48 | 0 | 8 | 92 | 11 | 95 | 1.22e-21 | 88.6 |
| Msa0904510 | MtrunA17_Chr4g0040831 | 38.182 | 110 | 65 | 1 | 4 | 113 | 8 | 114 | 3.80e-21 | 87.8 |
| Msa0904510 | MtrunA17_Chr8g0374591 | 36.364 | 99 | 63 | 0 | 10 | 108 | 7 | 105 | 8.16e-21 | 85.1 |
| Msa0904510 | MtrunA17_Chr7g0260971 | 37.168 | 113 | 70 | 1 | 2 | 113 | 5 | 117 | 7.48e-20 | 84.7 |
| Msa0904510 | MtrunA17_Chr6g0460951 | 35.185 | 108 | 69 | 1 | 12 | 118 | 41 | 148 | 6.30e-19 | 82.4 |
| Msa0904510 | MtrunA17_Chr8g0374601 | 37.374 | 99 | 62 | 0 | 10 | 108 | 25 | 123 | 2.01e-18 | 82.0 |
| Msa0904510 | MtrunA17_Chr8g0351721 | 38.614 | 101 | 61 | 1 | 12 | 111 | 19 | 119 | 1.38e-17 | 78.6 |
| Msa0904510 | MtrunA17_Chr4g0046201 | 40.000 | 80 | 48 | 0 | 11 | 90 | 6 | 85 | 2.82e-16 | 75.9 |
| Msa0904510 | MtrunA17_Chr5g0435641 | 32.990 | 97 | 64 | 1 | 10 | 105 | 6 | 102 | 6.32e-16 | 73.6 |
| Msa0904510 | MtrunA17_Chr8g0374581 | 36.000 | 100 | 63 | 1 | 10 | 108 | 7 | 106 | 7.32e-16 | 74.3 |
| Msa0904510 | MtrunA17_Chr1g0184281 | 35.714 | 98 | 62 | 1 | 12 | 108 | 16 | 113 | 1.34e-15 | 73.2 |
| Msa0904510 | MtrunA17_Chr6g0460941 | 32.979 | 94 | 62 | 1 | 6 | 98 | 2 | 95 | 1.34e-15 | 70.1 |
| Msa0904510 | MtrunA17_Chr1g0184271 | 40.741 | 81 | 47 | 1 | 12 | 91 | 13 | 93 | 1.61e-15 | 73.2 |
| Msa0904510 | MtrunA17_Chr8g0351701 | 34.694 | 98 | 63 | 1 | 12 | 108 | 24 | 121 | 3.08e-15 | 72.4 |
| Msa0904510 | MtrunA17_Chr7g0261031 | 40.741 | 81 | 47 | 1 | 12 | 91 | 9 | 89 | 6.91e-15 | 71.2 |
| Msa0904510 | MtrunA17_Chr7g0245871 | 33.673 | 98 | 64 | 1 | 12 | 108 | 28 | 125 | 1.42e-14 | 70.9 |
| Msa0904510 | MtrunA17_Chr2g0326041 | 56.250 | 48 | 21 | 0 | 12 | 59 | 34 | 81 | 1.64e-14 | 67.0 |
| Msa0904510 | MtrunA17_Chr7g0245861 | 37.363 | 91 | 53 | 3 | 1 | 87 | 1 | 91 | 1.52e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0904510 | AT3G47870.1 | 55.340 | 103 | 46 | 0 | 5 | 107 | 30 | 132 | 4.40e-34 | 125 |
| Msa0904510 | AT3G13850.1 | 53.061 | 98 | 46 | 0 | 10 | 107 | 35 | 132 | 1.97e-30 | 114 |
| Msa0904510 | AT1G72980.1 | 45.238 | 126 | 65 | 2 | 6 | 128 | 8 | 132 | 5.00e-29 | 109 |
| Msa0904510 | AT1G65620.1 | 49.398 | 83 | 42 | 0 | 8 | 90 | 6 | 88 | 2.08e-26 | 102 |
| Msa0904510 | AT1G65620.4 | 49.398 | 83 | 42 | 0 | 8 | 90 | 6 | 88 | 2.08e-26 | 102 |
| Msa0904510 | AT1G65620.3 | 49.398 | 83 | 42 | 0 | 8 | 90 | 6 | 88 | 2.08e-26 | 102 |
| Msa0904510 | AT1G65620.5 | 49.398 | 83 | 42 | 0 | 8 | 90 | 6 | 88 | 2.08e-26 | 102 |
| Msa0904510 | AT1G65620.2 | 49.398 | 83 | 42 | 0 | 8 | 90 | 6 | 88 | 2.08e-26 | 102 |
| Msa0904510 | AT3G26660.1 | 43.158 | 95 | 54 | 0 | 10 | 104 | 4 | 98 | 2.11e-26 | 99.8 |
| Msa0904510 | AT3G27650.1 | 44.330 | 97 | 54 | 0 | 8 | 104 | 36 | 132 | 2.19e-26 | 100 |
| Msa0904510 | AT3G26620.1 | 43.158 | 95 | 54 | 0 | 10 | 104 | 4 | 98 | 2.67e-26 | 99.4 |
| Msa0904510 | AT5G66870.1 | 38.835 | 103 | 63 | 0 | 6 | 108 | 2 | 104 | 3.99e-25 | 101 |
| Msa0904510 | AT2G30130.1 | 41.414 | 99 | 58 | 0 | 6 | 104 | 3 | 101 | 1.22e-24 | 97.1 |
| Msa0904510 | AT1G31320.1 | 46.835 | 79 | 42 | 0 | 12 | 90 | 14 | 92 | 1.58e-24 | 96.3 |
| Msa0904510 | AT5G63090.4 | 37.736 | 106 | 66 | 0 | 12 | 117 | 12 | 117 | 3.33e-24 | 95.9 |
| Msa0904510 | AT5G63090.3 | 37.736 | 106 | 66 | 0 | 12 | 117 | 12 | 117 | 3.33e-24 | 95.9 |
| Msa0904510 | AT5G63090.2 | 37.736 | 106 | 66 | 0 | 12 | 117 | 12 | 117 | 3.33e-24 | 95.9 |
| Msa0904510 | AT5G63090.1 | 37.736 | 106 | 66 | 0 | 12 | 117 | 12 | 117 | 3.33e-24 | 95.9 |
| Msa0904510 | AT1G16530.1 | 38.739 | 111 | 67 | 1 | 6 | 115 | 9 | 119 | 1.56e-23 | 93.6 |
| Msa0904510 | AT2G23660.2 | 38.614 | 101 | 62 | 0 | 8 | 108 | 2 | 102 | 6.74e-22 | 92.4 |
| Msa0904510 | AT2G23660.3 | 38.614 | 101 | 62 | 0 | 8 | 108 | 2 | 102 | 6.74e-22 | 92.4 |
| Msa0904510 | AT2G23660.1 | 38.614 | 101 | 62 | 0 | 8 | 108 | 2 | 102 | 6.74e-22 | 92.4 |
| Msa0904510 | AT1G07900.1 | 37.607 | 117 | 63 | 2 | 12 | 125 | 34 | 143 | 6.92e-22 | 89.7 |
| Msa0904510 | AT2G30340.2 | 36.275 | 102 | 65 | 0 | 7 | 108 | 49 | 150 | 9.36e-22 | 91.3 |
| Msa0904510 | AT2G30340.1 | 36.275 | 102 | 65 | 0 | 7 | 108 | 48 | 149 | 1.12e-21 | 90.9 |
| Msa0904510 | AT2G40470.2 | 36.275 | 102 | 65 | 0 | 7 | 108 | 16 | 117 | 2.57e-21 | 88.6 |
| Msa0904510 | AT2G40470.1 | 36.275 | 102 | 65 | 0 | 7 | 108 | 41 | 142 | 5.98e-21 | 88.2 |
| Msa0904510 | AT2G28500.1 | 40.206 | 97 | 51 | 1 | 12 | 108 | 56 | 145 | 1.29e-20 | 87.4 |
| Msa0904510 | AT3G50510.1 | 38.000 | 100 | 62 | 0 | 9 | 108 | 10 | 109 | 2.86e-20 | 85.9 |
| Msa0904510 | AT3G50510.2 | 38.000 | 100 | 62 | 0 | 9 | 108 | 10 | 109 | 2.86e-20 | 85.9 |
| Msa0904510 | AT5G15060.1 | 45.122 | 82 | 43 | 1 | 3 | 82 | 9 | 90 | 1.08e-19 | 82.8 |
| Msa0904510 | AT3G11090.1 | 39.759 | 83 | 50 | 0 | 8 | 90 | 8 | 90 | 1.71e-19 | 82.8 |
| Msa0904510 | AT1G06280.1 | 39.640 | 111 | 56 | 2 | 10 | 120 | 23 | 122 | 4.88e-19 | 82.8 |
| Msa0904510 | AT2G42430.1 | 40.659 | 91 | 53 | 1 | 2 | 91 | 6 | 96 | 1.97e-17 | 79.0 |
| Msa0904510 | AT3G03760.1 | 35.644 | 101 | 64 | 1 | 12 | 111 | 52 | 152 | 3.51e-17 | 79.0 |
| Msa0904510 | AT4G00220.1 | 36.538 | 104 | 65 | 1 | 14 | 116 | 20 | 123 | 2.16e-16 | 75.9 |
| Msa0904510 | AT2G42440.1 | 33.094 | 139 | 74 | 4 | 12 | 149 | 8 | 128 | 1.03e-15 | 74.3 |
| Msa0904510 | AT5G35900.1 | 29.000 | 100 | 71 | 0 | 9 | 108 | 3 | 102 | 1.08e-15 | 73.6 |
| Msa0904510 | AT5G06080.1 | 33.913 | 115 | 71 | 3 | 11 | 124 | 7 | 117 | 1.51e-15 | 72.4 |
| Msa0904510 | AT3G58190.1 | 37.755 | 98 | 60 | 1 | 12 | 108 | 12 | 109 | 1.52e-15 | 73.6 |
| Msa0904510 | AT4G00210.1 | 34.211 | 114 | 74 | 1 | 12 | 124 | 12 | 125 | 2.86e-15 | 72.8 |
| Msa0904510 | AT2G19820.1 | 35.088 | 114 | 65 | 3 | 1 | 112 | 1 | 107 | 3.32e-15 | 70.5 |
| Msa0904510 | AT2G45420.1 | 31.731 | 104 | 70 | 1 | 14 | 116 | 40 | 143 | 5.92e-14 | 69.7 |
| Msa0904510 | AT2G31310.1 | 35.632 | 87 | 55 | 1 | 6 | 91 | 2 | 88 | 7.29e-14 | 68.2 |
| Msa0904510 | AT2G45410.1 | 33.621 | 116 | 74 | 3 | 14 | 127 | 19 | 133 | 3.21e-13 | 66.6 |
Find 44 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCATTGTGAAGAATTAT+TGG | 0.154703 | 6_2:-2192099 | Msa0904510:CDS |
| GTAGTTCAAAATTTGATTTA+AGG | 0.221208 | 6_2:-2192067 | Msa0904510:CDS |
| CTTTCTTCTTTGGAATTTGC+AGG | 0.258062 | 6_2:+2192667 | None:intergenic |
| GAAGAATTATTGGATCTTAA+TGG | 0.282033 | 6_2:-2192089 | Msa0904510:CDS |
| GCAACGCTCATCGTTTGTTC+GGG | 0.294637 | 6_2:-2192586 | Msa0904510:CDS |
| GGTTTATCAGCAGGAAAATA+AGG | 0.329247 | 6_2:+2192620 | None:intergenic |
| TAGTTCAAAATTTGATTTAA+GGG | 0.335918 | 6_2:-2192066 | Msa0904510:CDS |
| GGCAACGCTCATCGTTTGTT+CGG | 0.348554 | 6_2:-2192587 | Msa0904510:CDS |
| AAGTCTGGTTTGGTATCAAT+TGG | 0.352922 | 6_2:+2192236 | None:intergenic |
| ATAAAATTAGTTTCAAAGTC+TGG | 0.359506 | 6_2:+2192221 | None:intergenic |
| AAAATTTGATTTAAGGGAAA+AGG | 0.388332 | 6_2:-2192060 | Msa0904510:CDS |
| CTTTAATATCTTCGATATGT+TGG | 0.391762 | 6_2:+2192559 | None:intergenic |
| TTATGAGGGATGTCATAATA+AGG | 0.392849 | 6_2:+2192272 | None:intergenic |
| AAAATATCAGATGCTGATAA+AGG | 0.393271 | 6_2:-2192035 | Msa0904510:CDS |
| GGGATGTCATAATAAGGATT+TGG | 0.396089 | 6_2:+2192278 | None:intergenic |
| ATTAGTTTCAAAGTCTGGTT+TGG | 0.401491 | 6_2:+2192226 | None:intergenic |
| GGGTTAATAGTAACATTATG+AGG | 0.404840 | 6_2:+2192257 | None:intergenic |
| GATGTTATTATGATGTATTA+TGG | 0.406805 | 6_2:-2192446 | Msa0904510:CDS |
| TCAGCCGATCATTTAGCAAT+TGG | 0.409945 | 6_2:+2190714 | None:intergenic |
| GGAACTTGAGTGCTACTAGA+AGG | 0.412919 | 6_2:+2192299 | None:intergenic |
| ACATCAAGACATCCACCAAC+AGG | 0.415425 | 6_2:+2192464 | None:intergenic |
| GAAGATATTAAAGCAAGTTA+AGG | 0.448622 | 6_2:-2192549 | Msa0904510:CDS |
| AGAATGATCGATTGATAAGT+AGG | 0.452412 | 6_2:+2192328 | None:intergenic |
| ATTAGTGGTGTTAGCAATAG+TGG | 0.455191 | 6_2:-2192173 | Msa0904510:CDS |
| AACACTTGTGGTTTATCAGC+AGG | 0.459111 | 6_2:+2192611 | None:intergenic |
| AGTCTGGTTTGGTATCAATT+GGG | 0.496674 | 6_2:+2192237 | None:intergenic |
| GCTGATAAACCACAAGTGTT+CGG | 0.498732 | 6_2:-2192608 | Msa0904510:CDS |
| AGGGTTACACAATTGATTAG+TGG | 0.501559 | 6_2:-2192188 | Msa0904510:CDS |
| TAGTGGTGGCGGCAATGCAA+TGG | 0.543972 | 6_2:-2192156 | Msa0904510:CDS |
| CGTGCTCAATTCCCTGTTGG+TGG | 0.544713 | 6_2:-2192476 | Msa0904510:CDS |
| GGTTAATAGTAACATTATGA+GGG | 0.554191 | 6_2:+2192258 | None:intergenic |
| GATCCAATAATTCTTCACAA+TGG | 0.560190 | 6_2:+2192096 | None:intergenic |
| CAACGCTCATCGTTTGTTCG+GGG | 0.570979 | 6_2:-2192585 | Msa0904510:CDS |
| GAATGATCGATTGATAAGTA+GGG | 0.582026 | 6_2:+2192329 | None:intergenic |
| TGAGCGTTGCCGAACACTTG+TGG | 0.583347 | 6_2:+2192599 | None:intergenic |
| ATGCGTGCTCAATTCCCTGT+TGG | 0.591693 | 6_2:-2192479 | Msa0904510:CDS |
| GGTGTTAGCAATAGTGGTGG+CGG | 0.607594 | 6_2:-2192167 | Msa0904510:CDS |
| TTGAGTGCTACTAGAAGGAG+CGG | 0.625473 | 6_2:+2192304 | None:intergenic |
| CATCAAGACATCCACCAACA+GGG | 0.653135 | 6_2:+2192465 | None:intergenic |
| TGCTGATAAAGGAGTAACTG+AGG | 0.670712 | 6_2:-2192024 | Msa0904510:intron |
| CAACAGAGGAGACACAAGCA+AGG | 0.679554 | 6_2:-2192699 | Msa0904510:CDS |
| CACCTAATGAATATCAACAG+AGG | 0.687745 | 6_2:-2192713 | None:intergenic |
| AGTGGTGTTAGCAATAGTGG+TGG | 0.691402 | 6_2:-2192170 | Msa0904510:CDS |
| TCTAACTTGATGGTAACACA+AGG | 0.694400 | 6_2:-2192125 | Msa0904510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAATTATTATTATTTT+TGG | - | chr6_2:2191446-2191465 | Msa0904510:intron | 0.0% |
| !!! | TTTTAATTATTATTATTTTT+GGG | - | chr6_2:2191447-2191466 | Msa0904510:intron | 0.0% |
| !!! | ATTTTAATTATTATTATTTT+TGG | - | chr6_2:2191446-2191465 | Msa0904510:intron | 0.0% |
| !!! | TTTTAATTATTATTATTTTT+GGG | - | chr6_2:2191447-2191466 | Msa0904510:intron | 0.0% |
| !!! | TTTTGCTAAAAAAATTATTA+TGG | + | chr6_2:2191786-2191805 | None:intergenic | 10.0% |
| !! | TTAAACAAAATTCAAAATAA+AGG | + | chr6_2:2191881-2191900 | None:intergenic | 10.0% |
| !!! | GATTTTTTAAAAAACATATT+CGG | + | chr6_2:2192114-2192133 | None:intergenic | 10.0% |
| !!! | ATGTTTTTTAAAAAATCAAT+CGG | - | chr6_2:2192117-2192136 | Msa0904510:CDS | 10.0% |
| !!! | TTTTGCTAAAAAAATTATTA+TGG | + | chr6_2:2191786-2191805 | None:intergenic | 10.0% |
| !! | TTAAACAAAATTCAAAATAA+AGG | + | chr6_2:2191881-2191900 | None:intergenic | 10.0% |
| !!! | GATTTTTTAAAAAACATATT+CGG | + | chr6_2:2192114-2192133 | None:intergenic | 10.0% |
| !!! | ATGTTTTTTAAAAAATCAAT+CGG | - | chr6_2:2192117-2192136 | Msa0904510:CDS | 10.0% |
| !!! | TAGTTCAAAATTTGATTTAA+GGG | - | chr6_2:2191363-2191382 | Msa0904510:intron | 15.0% |
| !! | TAAAGATATGTAATTAATGA+AGG | + | chr6_2:2191562-2191581 | None:intergenic | 15.0% |
| !! | TACATATCTTTAATCAATAT+AGG | - | chr6_2:2191570-2191589 | Msa0904510:intron | 15.0% |
| !!! | TTTAAGTTTAACCATTTTTT+CGG | - | chr6_2:2191821-2191840 | Msa0904510:intron | 15.0% |
| !!! | TTAACATTTTTATCCTAAAA+AGG | - | chr6_2:2191932-2191951 | Msa0904510:intron | 15.0% |
| !! | ACATTAAAACTAATCAAATT+AGG | - | chr6_2:2192316-2192335 | Msa0904510:CDS | 15.0% |
| !! | CATTAAAACTAATCAAATTA+GGG | - | chr6_2:2192317-2192336 | Msa0904510:CDS | 15.0% |
| !! | ATTAAAACTAATCAAATTAG+GGG | - | chr6_2:2192318-2192337 | Msa0904510:CDS | 15.0% |
| !!! | GTTTTTATAAGTTCTATATA+TGG | - | chr6_2:2192556-2192575 | Msa0904510:CDS | 15.0% |
| !!! | TAGTTCAAAATTTGATTTAA+GGG | - | chr6_2:2191363-2191382 | Msa0904510:intron | 15.0% |
| !! | TAAAGATATGTAATTAATGA+AGG | + | chr6_2:2191562-2191581 | None:intergenic | 15.0% |
| !! | TACATATCTTTAATCAATAT+AGG | - | chr6_2:2191570-2191589 | Msa0904510:intron | 15.0% |
| !!! | TTTAAGTTTAACCATTTTTT+CGG | - | chr6_2:2191821-2191840 | Msa0904510:intron | 15.0% |
| !!! | TTAACATTTTTATCCTAAAA+AGG | - | chr6_2:2191932-2191951 | Msa0904510:intron | 15.0% |
| !! | ACATTAAAACTAATCAAATT+AGG | - | chr6_2:2192316-2192335 | Msa0904510:CDS | 15.0% |
| !! | CATTAAAACTAATCAAATTA+GGG | - | chr6_2:2192317-2192336 | Msa0904510:CDS | 15.0% |
| !! | ATTAAAACTAATCAAATTAG+GGG | - | chr6_2:2192318-2192337 | Msa0904510:CDS | 15.0% |
| !!! | GTTTTTATAAGTTCTATATA+TGG | - | chr6_2:2192556-2192575 | Msa0904510:CDS | 15.0% |
| !!! | GAAATCAATTATTTTTGAGT+CGG | - | chr6_2:2190925-2190944 | Msa0904510:intron | 20.0% |
| !! | GATGTTATTATGATGTATTA+TGG | - | chr6_2:2190983-2191002 | Msa0904510:intron | 20.0% |
| !!! | ATAAAATTAGTTTCAAAGTC+TGG | + | chr6_2:2191211-2191230 | None:intergenic | 20.0% |
| !!! | AGACTTTGAAACTAATTTTA+TGG | - | chr6_2:2191210-2191229 | Msa0904510:intron | 20.0% |
| !!! | GTAGTTCAAAATTTGATTTA+AGG | - | chr6_2:2191362-2191381 | Msa0904510:intron | 20.0% |
| !!! | AAAATTTGATTTAAGGGAAA+AGG | - | chr6_2:2191369-2191388 | Msa0904510:intron | 20.0% |
| !!! | AGAAAGTATGAAAGTTTTTA+GGG | + | chr6_2:2192183-2192202 | None:intergenic | 20.0% |
| !!! | AAGAAAGTATGAAAGTTTTT+AGG | + | chr6_2:2192184-2192203 | None:intergenic | 20.0% |
| !!! | TGATTAGTTTTAATGTAACA+AGG | + | chr6_2:2192312-2192331 | None:intergenic | 20.0% |
| !! | AAATAAAAGACAATGTGTTA+AGG | + | chr6_2:2192398-2192417 | None:intergenic | 20.0% |
| !!! | GAAATCAATTATTTTTGAGT+CGG | - | chr6_2:2190925-2190944 | Msa0904510:intron | 20.0% |
| !! | GATGTTATTATGATGTATTA+TGG | - | chr6_2:2190983-2191002 | Msa0904510:intron | 20.0% |
| !!! | ATAAAATTAGTTTCAAAGTC+TGG | + | chr6_2:2191211-2191230 | None:intergenic | 20.0% |
| !!! | AGACTTTGAAACTAATTTTA+TGG | - | chr6_2:2191210-2191229 | Msa0904510:intron | 20.0% |
| !!! | GTAGTTCAAAATTTGATTTA+AGG | - | chr6_2:2191362-2191381 | Msa0904510:intron | 20.0% |
| !!! | AAAATTTGATTTAAGGGAAA+AGG | - | chr6_2:2191369-2191388 | Msa0904510:intron | 20.0% |
| !!! | AGAAAGTATGAAAGTTTTTA+GGG | + | chr6_2:2192183-2192202 | None:intergenic | 20.0% |
| !!! | AAGAAAGTATGAAAGTTTTT+AGG | + | chr6_2:2192184-2192203 | None:intergenic | 20.0% |
| !!! | TGATTAGTTTTAATGTAACA+AGG | + | chr6_2:2192312-2192331 | None:intergenic | 20.0% |
| !! | AAATAAAAGACAATGTGTTA+AGG | + | chr6_2:2192398-2192417 | None:intergenic | 20.0% |
| ! | CTTTAATATCTTCGATATGT+TGG | + | chr6_2:2190873-2190892 | None:intergenic | 25.0% |
| ! | GAAGATATTAAAGCAAGTTA+AGG | - | chr6_2:2190880-2190899 | Msa0904510:intron | 25.0% |
| ! | GGTTAATAGTAACATTATGA+GGG | + | chr6_2:2191174-2191193 | None:intergenic | 25.0% |
| ! | ATTCCATTGTGAAGAATTAT+TGG | - | chr6_2:2191330-2191349 | Msa0904510:intron | 25.0% |
| ! | GAAGAATTATTGGATCTTAA+TGG | - | chr6_2:2191340-2191359 | Msa0904510:intron | 25.0% |
| ! | AAAATATCAGATGCTGATAA+AGG | - | chr6_2:2191394-2191413 | Msa0904510:intron | 25.0% |
| ! | AAATTTCTCACATGATAAGA+AGG | - | chr6_2:2191633-2191652 | Msa0904510:intron | 25.0% |
| ! | TACTTAAATAACTTGGAATG+AGG | + | chr6_2:2191672-2191691 | None:intergenic | 25.0% |
| ! | TCGACAATACTTAAATAACT+TGG | + | chr6_2:2191679-2191698 | None:intergenic | 25.0% |
| !! | TGATTCTTTTAGTCCTTTTT+AGG | + | chr6_2:2191948-2191967 | None:intergenic | 25.0% |
| !!! | AGATCAATCTGAAACAATTT+TGG | - | chr6_2:2191990-2192009 | Msa0904510:intron | 25.0% |
| ! | AAAAATCAATCGGAAAAAAG+AGG | - | chr6_2:2192127-2192146 | Msa0904510:CDS | 25.0% |
| ! | TTAATGTAACAAGGAAACTA+AGG | + | chr6_2:2192303-2192322 | None:intergenic | 25.0% |
| ! | CTTTAATATCTTCGATATGT+TGG | + | chr6_2:2190873-2190892 | None:intergenic | 25.0% |
| ! | GAAGATATTAAAGCAAGTTA+AGG | - | chr6_2:2190880-2190899 | Msa0904510:intron | 25.0% |
| ! | GGTTAATAGTAACATTATGA+GGG | + | chr6_2:2191174-2191193 | None:intergenic | 25.0% |
| ! | ATTCCATTGTGAAGAATTAT+TGG | - | chr6_2:2191330-2191349 | Msa0904510:intron | 25.0% |
| ! | GAAGAATTATTGGATCTTAA+TGG | - | chr6_2:2191340-2191359 | Msa0904510:intron | 25.0% |
| ! | AAAATATCAGATGCTGATAA+AGG | - | chr6_2:2191394-2191413 | Msa0904510:intron | 25.0% |
| ! | AAATTTCTCACATGATAAGA+AGG | - | chr6_2:2191633-2191652 | Msa0904510:intron | 25.0% |
| ! | TACTTAAATAACTTGGAATG+AGG | + | chr6_2:2191672-2191691 | None:intergenic | 25.0% |
| ! | TCGACAATACTTAAATAACT+TGG | + | chr6_2:2191679-2191698 | None:intergenic | 25.0% |
| !! | TGATTCTTTTAGTCCTTTTT+AGG | + | chr6_2:2191948-2191967 | None:intergenic | 25.0% |
| !!! | AGATCAATCTGAAACAATTT+TGG | - | chr6_2:2191990-2192009 | Msa0904510:intron | 25.0% |
| ! | AAAAATCAATCGGAAAAAAG+AGG | - | chr6_2:2192127-2192146 | Msa0904510:CDS | 25.0% |
| ! | TTAATGTAACAAGGAAACTA+AGG | + | chr6_2:2192303-2192322 | None:intergenic | 25.0% |
| ! | CTTTTGAACACTTTCTTCTT+TGG | + | chr6_2:2190775-2190794 | None:intergenic | 30.0% |
| !!! | CAAGATTTTGTTGTTGCAAA+GGG | + | chr6_2:2191078-2191097 | None:intergenic | 30.0% |
| !!! | TCAAGATTTTGTTGTTGCAA+AGG | + | chr6_2:2191079-2191098 | None:intergenic | 30.0% |
| GAATGATCGATTGATAAGTA+GGG | + | chr6_2:2191103-2191122 | None:intergenic | 30.0% | |
| AGAATGATCGATTGATAAGT+AGG | + | chr6_2:2191104-2191123 | None:intergenic | 30.0% | |
| TTATGAGGGATGTCATAATA+AGG | + | chr6_2:2191160-2191179 | None:intergenic | 30.0% | |
| GGGTTAATAGTAACATTATG+AGG | + | chr6_2:2191175-2191194 | None:intergenic | 30.0% | |
| ! | ATTAGTTTCAAAGTCTGGTT+TGG | + | chr6_2:2191206-2191225 | None:intergenic | 30.0% |
| ! | TAATTTTATGGATGCAGCAA+GGG | - | chr6_2:2191222-2191241 | Msa0904510:intron | 30.0% |
| GGAAGAAAAATCTAACTTGA+TGG | - | chr6_2:2191294-2191313 | Msa0904510:intron | 30.0% | |
| GATCCAATAATTCTTCACAA+TGG | + | chr6_2:2191336-2191355 | None:intergenic | 30.0% | |
| ATTATGGAAAAGAATGTGCA+CGG | + | chr6_2:2191770-2191789 | None:intergenic | 30.0% | |
| !!! | GTTTAACCATTTTTTCGGAT+TGG | - | chr6_2:2191826-2191845 | Msa0904510:intron | 30.0% |
| AAAAAAGAGGTCCAACTTAA+AGG | - | chr6_2:2192140-2192159 | Msa0904510:CDS | 30.0% | |
| !!! | TCTCTCTTATTTTGATCACA+TGG | - | chr6_2:2192464-2192483 | Msa0904510:CDS | 30.0% |
| ! | CTTTTGAACACTTTCTTCTT+TGG | + | chr6_2:2190775-2190794 | None:intergenic | 30.0% |
| !!! | CAAGATTTTGTTGTTGCAAA+GGG | + | chr6_2:2191078-2191097 | None:intergenic | 30.0% |
| !!! | TCAAGATTTTGTTGTTGCAA+AGG | + | chr6_2:2191079-2191098 | None:intergenic | 30.0% |
| GAATGATCGATTGATAAGTA+GGG | + | chr6_2:2191103-2191122 | None:intergenic | 30.0% | |
| AGAATGATCGATTGATAAGT+AGG | + | chr6_2:2191104-2191123 | None:intergenic | 30.0% | |
| TTATGAGGGATGTCATAATA+AGG | + | chr6_2:2191160-2191179 | None:intergenic | 30.0% | |
| GGGTTAATAGTAACATTATG+AGG | + | chr6_2:2191175-2191194 | None:intergenic | 30.0% | |
| ! | ATTAGTTTCAAAGTCTGGTT+TGG | + | chr6_2:2191206-2191225 | None:intergenic | 30.0% |
| ! | TAATTTTATGGATGCAGCAA+GGG | - | chr6_2:2191222-2191241 | Msa0904510:intron | 30.0% |
| GGAAGAAAAATCTAACTTGA+TGG | - | chr6_2:2191294-2191313 | Msa0904510:intron | 30.0% | |
| GATCCAATAATTCTTCACAA+TGG | + | chr6_2:2191336-2191355 | None:intergenic | 30.0% | |
| ATTATGGAAAAGAATGTGCA+CGG | + | chr6_2:2191770-2191789 | None:intergenic | 30.0% | |
| !!! | GTTTAACCATTTTTTCGGAT+TGG | - | chr6_2:2191826-2191845 | Msa0904510:intron | 30.0% |
| AAAAAAGAGGTCCAACTTAA+AGG | - | chr6_2:2192140-2192159 | Msa0904510:CDS | 30.0% | |
| !!! | TCTCTCTTATTTTGATCACA+TGG | - | chr6_2:2192464-2192483 | Msa0904510:CDS | 30.0% |
| !! | CTTTCTTCTTTGGAATTTGC+AGG | + | chr6_2:2190765-2190784 | None:intergenic | 35.0% |
| GGTTTATCAGCAGGAAAATA+AGG | + | chr6_2:2190812-2190831 | None:intergenic | 35.0% | |
| GGGATGTCATAATAAGGATT+TGG | + | chr6_2:2191154-2191173 | None:intergenic | 35.0% | |
| !! | AGTCTGGTTTGGTATCAATT+GGG | + | chr6_2:2191195-2191214 | None:intergenic | 35.0% |
| !! | AAGTCTGGTTTGGTATCAAT+TGG | + | chr6_2:2191196-2191215 | None:intergenic | 35.0% |
| ! | CTAATTTTATGGATGCAGCA+AGG | - | chr6_2:2191221-2191240 | Msa0904510:intron | 35.0% |
| AGGGTTACACAATTGATTAG+TGG | - | chr6_2:2191241-2191260 | Msa0904510:intron | 35.0% | |
| ! | ATTAGTGGTGTTAGCAATAG+TGG | - | chr6_2:2191256-2191275 | Msa0904510:intron | 35.0% |
| ! | TCTAACTTGATGGTAACACA+AGG | - | chr6_2:2191304-2191323 | Msa0904510:intron | 35.0% |
| TCACATGATAAGAAGGTTGA+GGG | - | chr6_2:2191640-2191659 | Msa0904510:intron | 35.0% | |
| !! | AAACCTTGTGTTAGTTTGTG+CGG | + | chr6_2:2191706-2191725 | None:intergenic | 35.0% |
| GTCTCAAAACTTGTACATCT+TGG | - | chr6_2:2191854-2191873 | Msa0904510:intron | 35.0% | |
| ATTCTCAGATAAAACGTCCT+TGG | - | chr6_2:2192082-2192101 | Msa0904510:CDS | 35.0% | |
| ATGTCTACCATCCTTTAAGT+TGG | + | chr6_2:2192154-2192173 | None:intergenic | 35.0% | |
| AATTTCATGAAGTGTGTCAC+TGG | - | chr6_2:2192242-2192261 | Msa0904510:CDS | 35.0% | |
| ACACTAGATTGTGGAGAATA+GGG | + | chr6_2:2192279-2192298 | None:intergenic | 35.0% | |
| GCATGATCAAAAAATTGGTC+AGG | + | chr6_2:2192430-2192449 | None:intergenic | 35.0% | |
| GTCGAGCATGATCAAAAAAT+TGG | + | chr6_2:2192435-2192454 | None:intergenic | 35.0% | |
| !! | CTTTCTTCTTTGGAATTTGC+AGG | + | chr6_2:2190765-2190784 | None:intergenic | 35.0% |
| GGTTTATCAGCAGGAAAATA+AGG | + | chr6_2:2190812-2190831 | None:intergenic | 35.0% | |
| GGGATGTCATAATAAGGATT+TGG | + | chr6_2:2191154-2191173 | None:intergenic | 35.0% | |
| !! | AGTCTGGTTTGGTATCAATT+GGG | + | chr6_2:2191195-2191214 | None:intergenic | 35.0% |
| !! | AAGTCTGGTTTGGTATCAAT+TGG | + | chr6_2:2191196-2191215 | None:intergenic | 35.0% |
| ! | CTAATTTTATGGATGCAGCA+AGG | - | chr6_2:2191221-2191240 | Msa0904510:intron | 35.0% |
| AGGGTTACACAATTGATTAG+TGG | - | chr6_2:2191241-2191260 | Msa0904510:intron | 35.0% | |
| ! | ATTAGTGGTGTTAGCAATAG+TGG | - | chr6_2:2191256-2191275 | Msa0904510:intron | 35.0% |
| ! | TCTAACTTGATGGTAACACA+AGG | - | chr6_2:2191304-2191323 | Msa0904510:intron | 35.0% |
| TCACATGATAAGAAGGTTGA+GGG | - | chr6_2:2191640-2191659 | Msa0904510:intron | 35.0% | |
| !! | AAACCTTGTGTTAGTTTGTG+CGG | + | chr6_2:2191706-2191725 | None:intergenic | 35.0% |
| GTCTCAAAACTTGTACATCT+TGG | - | chr6_2:2191854-2191873 | Msa0904510:intron | 35.0% | |
| ATTCTCAGATAAAACGTCCT+TGG | - | chr6_2:2192082-2192101 | Msa0904510:CDS | 35.0% | |
| ATGTCTACCATCCTTTAAGT+TGG | + | chr6_2:2192154-2192173 | None:intergenic | 35.0% | |
| AATTTCATGAAGTGTGTCAC+TGG | - | chr6_2:2192242-2192261 | Msa0904510:CDS | 35.0% | |
| ACACTAGATTGTGGAGAATA+GGG | + | chr6_2:2192279-2192298 | None:intergenic | 35.0% | |
| GCATGATCAAAAAATTGGTC+AGG | + | chr6_2:2192430-2192449 | None:intergenic | 35.0% | |
| GTCGAGCATGATCAAAAAAT+TGG | + | chr6_2:2192435-2192454 | None:intergenic | 35.0% | |
| AACACTTGTGGTTTATCAGC+AGG | + | chr6_2:2190821-2190840 | None:intergenic | 40.0% | |
| GCTGATAAACCACAAGTGTT+CGG | - | chr6_2:2190821-2190840 | Msa0904510:intron | 40.0% | |
| TGCTGATAAAGGAGTAACTG+AGG | - | chr6_2:2191405-2191424 | Msa0904510:intron | 40.0% | |
| CTCACATGATAAGAAGGTTG+AGG | - | chr6_2:2191639-2191658 | Msa0904510:intron | 40.0% | |
| GCACAAACTAACACAAGGTT+TGG | - | chr6_2:2191705-2191724 | Msa0904510:intron | 40.0% | |
| CATGAGCCAATCCGAAAAAA+TGG | + | chr6_2:2191835-2191854 | None:intergenic | 40.0% | |
| AGTCGAAGCAAGACTATGTA+TGG | + | chr6_2:2192025-2192044 | None:intergenic | 40.0% | |
| AGATAAAACGTCCTTGGACT+GGG | - | chr6_2:2192088-2192107 | Msa0904510:CDS | 40.0% | |
| AAGAGGTCCAACTTAAAGGA+TGG | - | chr6_2:2192144-2192163 | Msa0904510:CDS | 40.0% | |
| CACACTAGATTGTGGAGAAT+AGG | + | chr6_2:2192280-2192299 | None:intergenic | 40.0% | |
| AACTAAGGCACACTAGATTG+TGG | + | chr6_2:2192288-2192307 | None:intergenic | 40.0% | |
| AACACTTGTGGTTTATCAGC+AGG | + | chr6_2:2190821-2190840 | None:intergenic | 40.0% | |
| GCTGATAAACCACAAGTGTT+CGG | - | chr6_2:2190821-2190840 | Msa0904510:intron | 40.0% | |
| TGCTGATAAAGGAGTAACTG+AGG | - | chr6_2:2191405-2191424 | Msa0904510:intron | 40.0% | |
| CTCACATGATAAGAAGGTTG+AGG | - | chr6_2:2191639-2191658 | Msa0904510:intron | 40.0% | |
| GCACAAACTAACACAAGGTT+TGG | - | chr6_2:2191705-2191724 | Msa0904510:intron | 40.0% | |
| CATGAGCCAATCCGAAAAAA+TGG | + | chr6_2:2191835-2191854 | None:intergenic | 40.0% | |
| AGTCGAAGCAAGACTATGTA+TGG | + | chr6_2:2192025-2192044 | None:intergenic | 40.0% | |
| AGATAAAACGTCCTTGGACT+GGG | - | chr6_2:2192088-2192107 | Msa0904510:CDS | 40.0% | |
| AAGAGGTCCAACTTAAAGGA+TGG | - | chr6_2:2192144-2192163 | Msa0904510:CDS | 40.0% | |
| CACACTAGATTGTGGAGAAT+AGG | + | chr6_2:2192280-2192299 | None:intergenic | 40.0% | |
| AACTAAGGCACACTAGATTG+TGG | + | chr6_2:2192288-2192307 | None:intergenic | 40.0% | |
| CATCAAGACATCCACCAACA+GGG | + | chr6_2:2190967-2190986 | None:intergenic | 45.0% | |
| ACATCAAGACATCCACCAAC+AGG | + | chr6_2:2190968-2190987 | None:intergenic | 45.0% | |
| ! | TTGAGTGCTACTAGAAGGAG+CGG | + | chr6_2:2191128-2191147 | None:intergenic | 45.0% |
| ! | GGAACTTGAGTGCTACTAGA+AGG | + | chr6_2:2191133-2191152 | None:intergenic | 45.0% |
| ! | AGTGGTGTTAGCAATAGTGG+TGG | - | chr6_2:2191259-2191278 | Msa0904510:intron | 45.0% |
| TGTCCGCACAAACTAACACA+AGG | - | chr6_2:2191700-2191719 | Msa0904510:intron | 45.0% | |
| AAAGAATGTGCACGGCTGAA+AGG | + | chr6_2:2191762-2191781 | None:intergenic | 45.0% | |
| TCTTGCTTCGACTGTGAATG+AGG | - | chr6_2:2192032-2192051 | Msa0904510:CDS | 45.0% | |
| CAGATAAAACGTCCTTGGAC+TGG | - | chr6_2:2192087-2192106 | Msa0904510:CDS | 45.0% | |
| CATCAAGACATCCACCAACA+GGG | + | chr6_2:2190967-2190986 | None:intergenic | 45.0% | |
| ACATCAAGACATCCACCAAC+AGG | + | chr6_2:2190968-2190987 | None:intergenic | 45.0% | |
| ! | TTGAGTGCTACTAGAAGGAG+CGG | + | chr6_2:2191128-2191147 | None:intergenic | 45.0% |
| ! | GGAACTTGAGTGCTACTAGA+AGG | + | chr6_2:2191133-2191152 | None:intergenic | 45.0% |
| ! | AGTGGTGTTAGCAATAGTGG+TGG | - | chr6_2:2191259-2191278 | Msa0904510:intron | 45.0% |
| TGTCCGCACAAACTAACACA+AGG | - | chr6_2:2191700-2191719 | Msa0904510:intron | 45.0% | |
| AAAGAATGTGCACGGCTGAA+AGG | + | chr6_2:2191762-2191781 | None:intergenic | 45.0% | |
| TCTTGCTTCGACTGTGAATG+AGG | - | chr6_2:2192032-2192051 | Msa0904510:CDS | 45.0% | |
| CAGATAAAACGTCCTTGGAC+TGG | - | chr6_2:2192087-2192106 | Msa0904510:CDS | 45.0% | |
| CAACAGAGGAGACACAAGCA+AGG | - | chr6_2:2190730-2190749 | Msa0904510:intron | 50.0% | |
| GGCAACGCTCATCGTTTGTT+CGG | - | chr6_2:2190842-2190861 | Msa0904510:intron | 50.0% | |
| GCAACGCTCATCGTTTGTTC+GGG | - | chr6_2:2190843-2190862 | Msa0904510:intron | 50.0% | |
| CAACGCTCATCGTTTGTTCG+GGG | - | chr6_2:2190844-2190863 | Msa0904510:intron | 50.0% | |
| ATGCGTGCTCAATTCCCTGT+TGG | - | chr6_2:2190950-2190969 | Msa0904510:intron | 50.0% | |
| GGTGTTAGCAATAGTGGTGG+CGG | - | chr6_2:2191262-2191281 | Msa0904510:intron | 50.0% | |
| ! | CAAGGTTTGGTCTTCTGCCA+TGG | - | chr6_2:2191718-2191737 | Msa0904510:intron | 50.0% |
| ACAGGTCTGGGAGATTTCCA+TGG | + | chr6_2:2191738-2191757 | None:intergenic | 50.0% | |
| GTGAATGAGGCTCATGCAAG+TGG | - | chr6_2:2192045-2192064 | Msa0904510:CDS | 50.0% | |
| AACATATTCGGCCCAGTCCA+AGG | + | chr6_2:2192102-2192121 | None:intergenic | 50.0% | |
| CAACAGAGGAGACACAAGCA+AGG | - | chr6_2:2190730-2190749 | Msa0904510:intron | 50.0% | |
| GGCAACGCTCATCGTTTGTT+CGG | - | chr6_2:2190842-2190861 | Msa0904510:intron | 50.0% | |
| GCAACGCTCATCGTTTGTTC+GGG | - | chr6_2:2190843-2190862 | Msa0904510:intron | 50.0% | |
| CAACGCTCATCGTTTGTTCG+GGG | - | chr6_2:2190844-2190863 | Msa0904510:intron | 50.0% | |
| ATGCGTGCTCAATTCCCTGT+TGG | - | chr6_2:2190950-2190969 | Msa0904510:intron | 50.0% | |
| GGTGTTAGCAATAGTGGTGG+CGG | - | chr6_2:2191262-2191281 | Msa0904510:intron | 50.0% | |
| ! | CAAGGTTTGGTCTTCTGCCA+TGG | - | chr6_2:2191718-2191737 | Msa0904510:intron | 50.0% |
| ACAGGTCTGGGAGATTTCCA+TGG | + | chr6_2:2191738-2191757 | None:intergenic | 50.0% | |
| GTGAATGAGGCTCATGCAAG+TGG | - | chr6_2:2192045-2192064 | Msa0904510:CDS | 50.0% | |
| AACATATTCGGCCCAGTCCA+AGG | + | chr6_2:2192102-2192121 | None:intergenic | 50.0% | |
| ! | TGAGCGTTGCCGAACACTTG+TGG | + | chr6_2:2190833-2190852 | None:intergenic | 55.0% |
| CGTGCTCAATTCCCTGTTGG+TGG | - | chr6_2:2190953-2190972 | Msa0904510:intron | 55.0% | |
| !! | TAGTGGTGGCGGCAATGCAA+TGG | - | chr6_2:2191273-2191292 | Msa0904510:intron | 55.0% |
| ! | CGGCTGAAAGGTACAGGTCT+GGG | + | chr6_2:2191750-2191769 | None:intergenic | 55.0% |
| ! | ACGGCTGAAAGGTACAGGTC+TGG | + | chr6_2:2191751-2191770 | None:intergenic | 55.0% |
| ! | TGTGCACGGCTGAAAGGTAC+AGG | + | chr6_2:2191756-2191775 | None:intergenic | 55.0% |
| ! | TGAGCGTTGCCGAACACTTG+TGG | + | chr6_2:2190833-2190852 | None:intergenic | 55.0% |
| CGTGCTCAATTCCCTGTTGG+TGG | - | chr6_2:2190953-2190972 | Msa0904510:intron | 55.0% | |
| !! | TAGTGGTGGCGGCAATGCAA+TGG | - | chr6_2:2191273-2191292 | Msa0904510:intron | 55.0% |
| ! | CGGCTGAAAGGTACAGGTCT+GGG | + | chr6_2:2191750-2191769 | None:intergenic | 55.0% |
| ! | ACGGCTGAAAGGTACAGGTC+TGG | + | chr6_2:2191751-2191770 | None:intergenic | 55.0% |
| ! | TGTGCACGGCTGAAAGGTAC+AGG | + | chr6_2:2191756-2191775 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 2190722 | 2192729 | 2190722 | ID=Msa0904510;Name=Msa0904510 |
| chr6_2 | mRNA | 2190722 | 2192729 | 2190722 | ID=Msa0904510-mRNA-1;Parent=Msa0904510;Name=Msa0904510-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|0.5|1|1|2|0|241 |
| chr6_2 | exon | 2192025 | 2192729 | 2192025 | ID=Msa0904510-mRNA-1:exon:712;Parent=Msa0904510-mRNA-1 |
| chr6_2 | exon | 2190722 | 2190742 | 2190722 | ID=Msa0904510-mRNA-1:exon:711;Parent=Msa0904510-mRNA-1 |
| chr6_2 | CDS | 2192025 | 2192729 | 2192025 | ID=Msa0904510-mRNA-1:cds;Parent=Msa0904510-mRNA-1 |
| chr6_2 | CDS | 2190722 | 2190742 | 2190722 | ID=Msa0904510-mRNA-1:cds;Parent=Msa0904510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
